ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbags27a06 |
|---|---|
| Clone Library Name | barley_pub |
>PARP1_ARATH (Q9ZP54) Poly [ADP-ribose] polymerase 1 (EC 2.4.2.30) (PARP-1) (ADPRT| 1) (NAD(+) ADP-ribosyltransferase 1) (Poly[ADP-ribose] synthetase 1) Length = 983 Score = 190 bits (482), Expect = 3e-48 Identities = 89/114 (78%), Positives = 101/114 (88%) Frame = -3 Query: 607 DLVSKSAQYCYVDRKNPTGLMLLSEVALGDMHELKKATPMDKPPRGKHSTKGLGKTVPLE 428 DLVSKSAQYCY +KNP GLMLLSEVALG++HEL KA MDKPPRGKHSTKGLGK VP + Sbjct: 870 DLVSKSAQYCYTCKKNPVGLMLLSEVALGEIHELTKAKYMDKPPRGKHSTKGLGKKVPQD 929 Query: 427 SEFVKWRDDVVVPCGKPVPASIRASELLYNEYIVYNTAQVKMQFLLKVKFRHKR 266 SEF KWR DV VPCGKPV + ++ASEL+YNEYIVY+TAQVK+QFLLKV+F+HKR Sbjct: 930 SEFAKWRGDVTVPCGKPVSSKVKASELMYNEYIVYDTAQVKLQFLLKVRFKHKR 983
>PARP1_XENLA (P31669) Poly [ADP-ribose] polymerase (EC 2.4.2.30) (PARP) (ADPRT)| (NAD(+) ADP-ribosyltransferase) (Poly[ADP-ribose] synthetase) (Fragment) Length = 998 Score = 122 bits (306), Expect = 8e-28 Identities = 64/113 (56%), Positives = 82/113 (72%) Frame = -3 Query: 607 DLVSKSAQYCYVDRKNPTGLMLLSEVALGDMHELKKATPMDKPPRGKHSTKGLGKTVPLE 428 D+VSKSA YC+ +P GL+LL EVALG+MHELK A+ + K P+GKHS KGLG+T P Sbjct: 882 DMVSKSANYCHAMPGSPIGLILLGEVALGNMHELKAASQITKLPKGKHSVKGLGRTAPDP 941 Query: 427 SEFVKWRDDVVVPCGKPVPASIRASELLYNEYIVYNTAQVKMQFLLKVKFRHK 269 S V+ D V VP GK A+I + LLYNEYIVY+ AQV +++LLK+KF +K Sbjct: 942 SATVQ-LDGVDVPLGKGTSANISDTSLLYNEYIVYDIAQVNLKYLLKLKFNYK 993
>PARP1_RAT (P27008) Poly [ADP-ribose] polymerase 1 (EC 2.4.2.30) (PARP-1)| (ADPRT) (NAD(+) ADP-ribosyltransferase 1) (Poly[ADP-ribose] synthetase 1) Length = 1013 Score = 120 bits (301), Expect = 3e-27 Identities = 61/113 (53%), Positives = 81/113 (71%) Frame = -3 Query: 607 DLVSKSAQYCYVDRKNPTGLMLLSEVALGDMHELKKATPMDKPPRGKHSTKGLGKTVPLE 428 D+VSKSA YC+ + +P GL+LL EVALG+M+ELK A+ + K P+GKHS KGLGKT P Sbjct: 898 DMVSKSANYCHTSQGDPIGLILLGEVALGNMYELKHASHISKLPKGKHSVKGLGKTAPDP 957 Query: 427 SEFVKWRDDVVVPCGKPVPASIRASELLYNEYIVYNTAQVKMQFLLKVKFRHK 269 S + D V VP G +P+ + + LLYNEYIVY+ AQV +++LLK+KF K Sbjct: 958 SASIT-LDGVEVPLGTGIPSGVNDTCLLYNEYIVYDIAQVNLKYLLKLKFNFK 1009
>PARP1_MOUSE (P11103) Poly [ADP-ribose] polymerase 1 (EC 2.4.2.30) (PARP-1)| (ADPRT) (NAD(+) ADP-ribosyltransferase 1) (Poly[ADP-ribose] synthetase 1) (msPARP) Length = 1012 Score = 119 bits (298), Expect = 7e-27 Identities = 59/113 (52%), Positives = 81/113 (71%) Frame = -3 Query: 607 DLVSKSAQYCYVDRKNPTGLMLLSEVALGDMHELKKATPMDKPPRGKHSTKGLGKTVPLE 428 D+VSKSA YC+ + +P GL++L EVALG+M+ELK A+ + K P+GKHS KGLGKT P Sbjct: 897 DMVSKSANYCHTSQGDPIGLIMLGEVALGNMYELKHASHISKLPKGKHSVKGLGKTTPDP 956 Query: 427 SEFVKWRDDVVVPCGKPVPASIRASELLYNEYIVYNTAQVKMQFLLKVKFRHK 269 S + + V VP G +P+ + + LLYNEYIVY+ AQV +++LLK+KF K Sbjct: 957 SASIT-LEGVEVPLGTGIPSGVNDTALLYNEYIVYDIAQVNLKYLLKLKFNFK 1008
>PARP1_CRIGR (Q9R152) Poly [ADP-ribose] polymerase 1 (EC 2.4.2.30) (PARP-1)| (ADPRT) (NAD(+) ADP-ribosyltransferase 1) (Poly[ADP-ribose] synthetase 1) Length = 1012 Score = 119 bits (297), Expect = 9e-27 Identities = 60/113 (53%), Positives = 81/113 (71%) Frame = -3 Query: 607 DLVSKSAQYCYVDRKNPTGLMLLSEVALGDMHELKKATPMDKPPRGKHSTKGLGKTVPLE 428 D+VSKSA YC+ + +P GL+LL EVALG+M+ELK A+ + K P+GKHS KGLGKT P Sbjct: 897 DMVSKSANYCHTSQGDPIGLILLGEVALGNMYELKHASHISKLPKGKHSVKGLGKTTPDP 956 Query: 427 SEFVKWRDDVVVPCGKPVPASIRASELLYNEYIVYNTAQVKMQFLLKVKFRHK 269 S + + V VP G +P+ + + LLYNEYIVY+ AQV +++LLK+KF K Sbjct: 957 SASIT-LEGVEVPLGTGIPSGVNDTCLLYNEYIVYDIAQVNLKYLLKLKFNFK 1008
>PARP1_CHICK (P26446) Poly [ADP-ribose] polymerase 1 (EC 2.4.2.30) (PARP-1)| (ADPRT) (NAD(+) ADP-ribosyltransferase 1) (Poly[ADP-ribose] synthetase 1) Length = 1011 Score = 118 bits (296), Expect = 1e-26 Identities = 60/113 (53%), Positives = 79/113 (69%) Frame = -3 Query: 607 DLVSKSAQYCYVDRKNPTGLMLLSEVALGDMHELKKATPMDKPPRGKHSTKGLGKTVPLE 428 D+VSKSA YC+ + +P GL+LL EVALG+M+ELK A+ + K P+GKHS KGLGKT P + Sbjct: 896 DMVSKSANYCHTSQADPIGLILLGEVALGNMYELKNASHITKLPKGKHSVKGLGKTAP-D 954 Query: 427 SEFVKWRDDVVVPCGKPVPASIRASELLYNEYIVYNTAQVKMQFLLKVKFRHK 269 D V VP G + I + LLYNEYIVY+ AQV +++LLK+KF +K Sbjct: 955 PTATTTLDGVEVPLGNGISTGINDTCLLYNEYIVYDVAQVNLKYLLKLKFNYK 1007
>PARP1_HUMAN (P09874) Poly [ADP-ribose] polymerase 1 (EC 2.4.2.30) (PARP-1)| (ADPRT) (NAD(+) ADP-ribosyltransferase 1) (Poly[ADP-ribose] synthetase 1) Length = 1013 Score = 118 bits (296), Expect = 1e-26 Identities = 60/113 (53%), Positives = 80/113 (70%) Frame = -3 Query: 607 DLVSKSAQYCYVDRKNPTGLMLLSEVALGDMHELKKATPMDKPPRGKHSTKGLGKTVPLE 428 D+VSKSA YC+ + +P GL+LL EVALG+M+ELK A+ + K P+GKHS KGLGKT P Sbjct: 898 DMVSKSANYCHTSQGDPIGLILLGEVALGNMYELKHASHISKLPKGKHSVKGLGKTTPDP 957 Query: 427 SEFVKWRDDVVVPCGKPVPASIRASELLYNEYIVYNTAQVKMQFLLKVKFRHK 269 S + D V VP G + + + + LLYNEYIVY+ AQV +++LLK+KF K Sbjct: 958 SANIS-LDGVDVPLGTGISSGVNDTSLLYNEYIVYDIAQVNLKYLLKLKFNFK 1009
>PARP1_BOVIN (P18493) Poly [ADP-ribose] polymerase 1 (EC 2.4.2.30) (PARP-1)| (ADPRT) (NAD(+) ADP-ribosyltransferase 1) (Poly[ADP-ribose] synthetase 1) Length = 1015 Score = 114 bits (285), Expect = 2e-25 Identities = 59/113 (52%), Positives = 78/113 (69%) Frame = -3 Query: 607 DLVSKSAQYCYVDRKNPTGLMLLSEVALGDMHELKKATPMDKPPRGKHSTKGLGKTVPLE 428 D+VSKSA YC+ + +P GL+LL E ALG+M+ELK A + K P+GKHS KGLGKT P Sbjct: 900 DMVSKSANYCHTSQGDPIGLILLGEAALGNMYELKHARHISKLPKGKHSVKGLGKTTPDP 959 Query: 427 SEFVKWRDDVVVPCGKPVPASIRASELLYNEYIVYNTAQVKMQFLLKVKFRHK 269 S + D V VP G + + + + LLYNEYIVY+ AQV +++LLK+KF K Sbjct: 960 SASIT-VDGVEVPLGTGISSGVNDTCLLYNEYIVYDIAQVHLKYLLKLKFNFK 1011
>PARP2_ARATH (Q11207) Poly [ADP-ribose] polymerase 2 (EC 2.4.2.30) (PARP-2)| (ADPRT 2) (NAD(+) ADP-ribosyltransferase 2) (Poly[ADP-ribose] synthetase 2) Length = 637 Score = 113 bits (282), Expect = 5e-25 Identities = 61/114 (53%), Positives = 75/114 (65%), Gaps = 1/114 (0%) Frame = -3 Query: 607 DLVSKSAQYCYVDRKNPTGLMLLSEVALGDMHELKKAT-PMDKPPRGKHSTKGLGKTVPL 431 D+ SKSA YCY + G++LL EVALGDM+EL + D P GK STKG+GKT P Sbjct: 523 DMFSKSANYCYANTGANDGVLLLCEVALGDMNELLYSDYNADNLPPGKLSTKGVGKTAPN 582 Query: 430 ESEFVKWRDDVVVPCGKPVPASIRASELLYNEYIVYNTAQVKMQFLLKVKFRHK 269 SE D VVVP GKPV S LLYNEYIVYN Q+KM+++++VKF +K Sbjct: 583 PSEAQTLEDGVVVPLGKPVERSCSKGMLLYNEYIVYNVEQIKMRYVIQVKFNYK 636
>PARP_SARPE (Q11208) Poly [ADP-ribose] polymerase (EC 2.4.2.30) (PARP) (ADPRT)| (NAD(+) ADP-ribosyltransferase) (Poly[ADP-ribose] synthetase) Length = 996 Score = 112 bits (281), Expect = 6e-25 Identities = 57/113 (50%), Positives = 74/113 (65%) Frame = -3 Query: 607 DLVSKSAQYCYVDRKNPTGLMLLSEVALGDMHELKKATPMDKPPRGKHSTKGLGKTVPLE 428 D+VSKSA YC N TGLMLLSEVALGDM E A + K P KHS G G+T+P Sbjct: 884 DMVSKSANYCCTSHHNSTGLMLLSEVALGDMMECTAAKYVTKLPNDKHSCFGRGRTMPNP 943 Query: 427 SEFVKWRDDVVVPCGKPVPASIRASELLYNEYIVYNTAQVKMQFLLKVKFRHK 269 SE + D V +P GKP+ S LLYNE+I+Y+ AQV +Q++L++ F++K Sbjct: 944 SESIIREDGVEIPLGKPITNDSLKSSLLYNEFIIYDIAQVNIQYMLRMNFKYK 996
>PARP_DROME (P35875) Poly [ADP-ribose] polymerase (EC 2.4.2.30) (PARP) (ADPRT)| (NAD(+) ADP-ribosyltransferase) (Poly[ADP-ribose] synthetase) Length = 994 Score = 102 bits (253), Expect = 1e-21 Identities = 53/112 (47%), Positives = 73/112 (65%) Frame = -3 Query: 607 DLVSKSAQYCYVDRKNPTGLMLLSEVALGDMHELKKATPMDKPPRGKHSTKGLGKTVPLE 428 D+VSKSA YC ++N TGLMLLSEVALGDM E A ++K KHS G G+T+P Sbjct: 881 DMVSKSANYCCTSQQNSTGLMLLSEVALGDMMECTSAKYINKLSNNKHSCFGRGRTMPDP 940 Query: 427 SEFVKWRDDVVVPCGKPVPASIRASELLYNEYIVYNTAQVKMQFLLKVKFRH 272 ++ D V +P G+ + S LLYNEYIVY+ AQV +Q+L +++F++ Sbjct: 941 TKSYIRSDGVEIPYGETITDEHLKSSLLYNEYIVYDVAQVNIQYLFRMEFKY 992
>PARP2_HUMAN (Q9UGN5) Poly [ADP-ribose] polymerase 2 (EC 2.4.2.30) (PARP-2)| (NAD(+) ADP-ribosyltransferase 2) (Poly[ADP-ribose] synthetase 2) (pADPRT-2) (hPARP-2) Length = 583 Score = 95.1 bits (235), Expect = 1e-19 Identities = 57/114 (50%), Positives = 70/114 (61%), Gaps = 4/114 (3%) Frame = -3 Query: 607 DLVSKSAQYCYVDRKNPTGLMLLSEVALGDMHELKKATP-MDKPPRGKHSTKGLGKTVPL 431 D+ SKSA YC+ R TGL+LLSEVALG +EL +A P + +GKHSTKGLGK P Sbjct: 465 DMSSKSANYCFASRLKNTGLLLLSEVALGQCNELLEANPKAEGLLQGKHSTKGLGKMAPS 524 Query: 430 ESEFVKWRDDVVVPCGKPVPASIRASE---LLYNEYIVYNTAQVKMQFLLKVKF 278 + FV VP G I + L YNEYIVYN QV+M++LLKV+F Sbjct: 525 SAHFVTLNGS-TVPLGPASDTGILNPDGYTLNYNEYIVYNPNQVRMRYLLKVQF 577
>PARP2_MOUSE (O88554) Poly [ADP-ribose] polymerase 2 (EC 2.4.2.30) (PARP-2)| (NAD(+) ADP-ribosyltransferase 2) (Poly[ADP-ribose] synthetase 2) (pADPRT-2) (mPARP-2) Length = 559 Score = 92.4 bits (228), Expect = 9e-19 Identities = 54/114 (47%), Positives = 70/114 (61%), Gaps = 4/114 (3%) Frame = -3 Query: 607 DLVSKSAQYCYVDRKNPTGLMLLSEVALGDMHELKKATPMDKP-PRGKHSTKGLGKTVPL 431 D+ SKSA YC+ R TGL+LLSEVALG +EL +A P + RGKHSTKG+GK P Sbjct: 441 DMSSKSANYCFASRLKNTGLLLLSEVALGQCNELLEANPKAQGLLRGKHSTKGMGKMAPS 500 Query: 430 ESEFVKWRDDVVVPCGKPVPASIRASE---LLYNEYIVYNTAQVKMQFLLKVKF 278 + F+ VP G I E L YNE+IVY+ QV+M++LLK++F Sbjct: 501 PAHFITLNGS-TVPLGPASDTGILNPEGYTLNYNEFIVYSPNQVRMRYLLKIQF 553
>PME6_CAEEL (Q9XUA5) Poly(ADP-ribose) polymerase pme-6 (EC 2.4.2.30) (Poly| ADP-ribose metabolism enzyme 6) Length = 737 Score = 62.0 bits (149), Expect = 1e-09 Identities = 41/121 (33%), Positives = 65/121 (53%), Gaps = 7/121 (5%) Frame = -3 Query: 607 DLVSKSAQYCYVDRKNPTGLMLLSEVALGDMHELKKATPMDKP--PRGKHSTKGLGKTVP 434 D+ SKS YC + K L LL +VALG++ +L + + + P G S +G+G+ P Sbjct: 617 DMFSKSFFYCRANAKEEAYL-LLCDVALGNVQQLMASKNVSRQTLPAGFQSVQGVGRQCP 675 Query: 433 LESEFVKWRDDVVVPCGKPVPASIRASE-----LLYNEYIVYNTAQVKMQFLLKVKFRHK 269 E K D VP G ++ + LLYNE+IVY+ Q+++++L++VK H Sbjct: 676 REIGSYKNPDGYTVPLGLTY-MQLQGKQNVDYHLLYNEFIVYDVDQIQLKYLVRVKMHHA 734 Query: 268 R 266 R Sbjct: 735 R 735
>PME1_CAEEL (Q9N4H4) Poly(ADP-ribose) polymerase pme-1 (EC 2.4.2.30) (Poly| ADP-ribose metabolism enzyme 1) Length = 945 Score = 61.6 bits (148), Expect = 2e-09 Identities = 40/120 (33%), Positives = 62/120 (51%), Gaps = 6/120 (5%) Frame = -3 Query: 607 DLVSKSAQYCYVDRKNPTGLMLLSEVALGDMHELKKATPMDKP--PRGKHSTKGLGKTVP 434 D+ SKS YC + K L LL +VALG++ +L + + + P G S +GLG+ P Sbjct: 825 DMFSKSFFYCRANAKEEAYL-LLCDVALGNVQQLMASKNVSRQTLPAGFQSVQGLGRQCP 883 Query: 433 LESEFVKWRDDVVVPCGKPVPASIRASE----LLYNEYIVYNTAQVKMQFLLKVKFRHKR 266 E D +P G + LLYNE+IVY+ Q+++++L++VK H R Sbjct: 884 REIGSYNHPDGYTIPLGLTYMQLQGKQDVDYHLLYNEFIVYDVDQIQLKYLVRVKMHHAR 943
>PARP3_HUMAN (Q9Y6F1) Poly [ADP-ribose] polymerase 3 (EC 2.4.2.30) (PARP-3)| (NAD(+) ADP-ribosyltransferase 3) (Poly[ADP-ribose] synthetase 3) (pADPRT-3) (hPARP-3) (IRT1) Length = 533 Score = 53.1 bits (126), Expect = 6e-07 Identities = 39/112 (34%), Positives = 57/112 (50%), Gaps = 7/112 (6%) Frame = -3 Query: 598 SKSAQYCYVDR--KNPTGLMLLSEVALGDMHELKKATP-MDKPPRGKHSTKGLGKTVPLE 428 SKSA Y + + G M L EVALG H + P + PP G S G T P Sbjct: 420 SKSAGYVIGMKCGAHHVGYMFLGEVALGREHHINTDNPSLKSPPPGFDSVIARGHTEPDP 479 Query: 427 SEFVKWRDD---VVVPCGKPVPA-SIRASELLYNEYIVYNTAQVKMQFLLKV 284 ++ + D VVVP G+PVP +S +EY++Y +Q ++++LL+V Sbjct: 480 TQDTELELDGQQVVVPQGQPVPCPEFSSSTFSQSEYLIYQESQCRLRYLLEV 531
>PARP4_HUMAN (Q9UKK3) Poly [ADP-ribose] polymerase 4 (EC 2.4.2.30) (PARP-4)| (Vault poly(ADP-ribose) polymerase) (VPARP) (193-kDa vault protein) (PARP-related/IalphaI-related H5/proline-rich) (PH5P) Length = 1724 Score = 42.7 bits (99), Expect = 8e-04 Identities = 32/110 (29%), Positives = 53/110 (48%), Gaps = 3/110 (2%) Frame = -3 Query: 607 DLVSKSAQYCYVDRKNPTGLMLLSEVALG---DMHELKKATPMDKPPRGKHSTKGLGKTV 437 D +S S +Y + + T L+L+ +VALG D+HE K + + P G S G+ +T Sbjct: 480 DSLSTSIKYSHPGETDGTRLLLICDVALGKCMDLHE--KDFSLTEAPPGYDSVHGVSQTA 537 Query: 436 PLESEFVKWRDDVVVPCGKPVPASIRASELLYNEYIVYNTAQVKMQFLLK 287 + ++F DD E++VY T QVKM++++K Sbjct: 538 SVTTDF---EDD---------------------EFVVYKTNQVKMKYIIK 563
>SYFB_SYNSC (Q3AJY9) Phenylalanyl-tRNA synthetase beta chain (EC 6.1.1.20)| (Phenylalanine--tRNA ligase beta chain) (PheRS) Length = 807 Score = 32.3 bits (72), Expect = 1.1 Identities = 19/50 (38%), Positives = 24/50 (48%) Frame = -3 Query: 481 PPRGKHSTKGLGKTVPLESEFVKWRDDVVVPCGKPVPASIRASELLYNEY 332 PPR +HS + LG S F K +P +P S RAS LL E+ Sbjct: 348 PPRVRHSARALGLRTDASSRFEKG-----LPVEMTLPCSARASALLSQEF 392
>TACC3_HUMAN (Q9Y6A5) Transforming acidic coiled-coil-containing protein 3| (ERIC-1) Length = 838 Score = 31.6 bits (70), Expect = 1.9 Identities = 23/56 (41%), Positives = 26/56 (46%), Gaps = 2/56 (3%) Frame = +3 Query: 336 SLYRSSDALI--DAGTGLPQGTTTSSLHLTNSDSSGTVLPKPLVECFPLGGLSIGV 497 SLY D L+ G +P T TSS+H N SG LVE LG L I V Sbjct: 558 SLYLKFDPLLRDSPGRPVPVATETSSMHGANETPSGRPREAKLVEFDFLGALDIPV 613
>PME2_CAEEL (Q09525) Poly(ADP-ribose) polymerase pme-2 (EC 2.4.2.30) (Poly| ADP-ribose metabolism enzyme 2) Length = 538 Score = 31.6 bits (70), Expect = 1.9 Identities = 30/112 (26%), Positives = 51/112 (45%), Gaps = 6/112 (5%) Frame = -3 Query: 598 SKSAQYCYVDRKNPTGLMLLSEVALGDM-----HELKKATPMDKPPRGKHSTKGLGKTVP 434 +KSA YC + MLL EV + E+ M+K K S GK P Sbjct: 424 TKSANYCCPEASKRV-FMLLCEVETANPLVLYESEIDADEKMEKAK--KTSVYAAGKHTP 480 Query: 433 LESEFVKWRDDVVVPCGKPVPASIRA-SELLYNEYIVYNTAQVKMQFLLKVK 281 ++ + +P K +I + LLY+EY+++N K++++++VK Sbjct: 481 RDTVEING-----IPAFKSNLETIEEETRLLYDEYVMFNKEHFKIKYVVEVK 527
>PITX1_DROME (O18400) Pituitary homeobox 1 homolog (D-PTX1)| Length = 509 Score = 30.4 bits (67), Expect = 4.2 Identities = 11/23 (47%), Positives = 15/23 (65%) Frame = +3 Query: 30 IHHQWGDNNAGGYSRHSHPTPMP 98 +HH G + GGYS+H H T +P Sbjct: 142 LHHSAGQDLVGGYSQHPHHTVVP 164
>SEM4G_HUMAN (Q9NTN9) Semaphorin-4G precursor| Length = 838 Score = 29.6 bits (65), Expect = 7.2 Identities = 13/38 (34%), Positives = 23/38 (60%) Frame = -3 Query: 490 MDKPPRGKHSTKGLGKTVPLESEFVKWRDDVVVPCGKP 377 +++ RG S++ G PL++ V DDV++PC +P Sbjct: 550 IERGNRGCESSRDTGPPPPLKTRSVLRGDDVLLPCDQP 587
>PEPL1_MOUSE (Q6NSR8) Probable aminopeptidase NPEPL1 (EC 3.4.11.-)| (Aminopeptidase-like 1) Length = 524 Score = 29.3 bits (64), Expect = 9.4 Identities = 21/73 (28%), Positives = 32/73 (43%) Frame = +1 Query: 307 SPELCCTLYTRCTEAQMP**MLALACHKARRHHPSI*QTPTLVAQFCLSPWSNASLLEVC 486 +P C LY C + AL +R + PS T + + CL P ++ +L VC Sbjct: 62 NPTDSCPLYLNCAT------VAALPSRVSRHNSPSAAHFITRLVRTCLPPGTHRCILMVC 115 Query: 487 PLALLFSVHACLL 525 +F+ AC L Sbjct: 116 EQTEVFA-SACAL 127
>SYNJ2_HUMAN (O15056) Synaptojanin-2 (EC 3.1.3.36) (Synaptic| inositol-1,4,5-trisphosphate 5-phosphatase 2) Length = 1496 Score = 29.3 bits (64), Expect = 9.4 Identities = 22/51 (43%), Positives = 25/51 (49%), Gaps = 4/51 (7%) Frame = +3 Query: 342 YRSSDALID----AGTGLPQGTTTSSLHLTNSDSSGTVLPKPLVECFPLGG 482 Y SSD+ AGT PQG S+ T+ DS GT KP E PL G Sbjct: 1361 YNSSDSPSGHPPAAGTVFPQGDFLSTSSATSPDSDGTKAMKP--EAAPLLG 1409
>AOC4_ARATH (Q93ZC5) Allene oxide cyclase 4, chloroplast precursor (EC| 5.3.99.6) Length = 254 Score = 29.3 bits (64), Expect = 9.4 Identities = 25/82 (30%), Positives = 35/82 (42%), Gaps = 7/82 (8%) Frame = +3 Query: 24 LSIHHQWGDNNAGGYSRHSHPTPMPYSQNGSNARAAQPTLSCGIIHR*HCISNSAD*LLS 203 LS +HQ + G+SR H + + G + RA T S G R C S+S D Sbjct: 19 LSRNHQSHQSTFLGFSRSFHNQRISSNSPGLSTRARSTTSSTGGFFRTICSSSSNDYSRP 78 Query: 204 TDNKE-------DSSTNSPTLL 248 T +E + NSP +L Sbjct: 79 TKIQELNVYEFNEGDRNSPAVL 100 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 89,690,457 Number of Sequences: 219361 Number of extensions: 1867975 Number of successful extensions: 5575 Number of sequences better than 10.0: 25 Number of HSP's better than 10.0 without gapping: 5400 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5560 length of database: 80,573,946 effective HSP length: 107 effective length of database: 57,102,319 effective search space used: 5424720305 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
