ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags27a06
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK106540.1| Oryza sativa (japonica cultivar-group) cDNA clon... 351 2e-93
2ref|XM_477671.1| Oryza sativa (japonica cultivar-group), mRNA 343 4e-91
3dbj|AK103479.1| Oryza sativa (japonica cultivar-group) cDNA clon... 343 4e-91
4emb|AJ222589.1|ZMPARP2 Zea mays mRNA for poly(ADP-ribose) polyme... 287 2e-74
5gb|AY110247.1| Zea mays CL1689_1 mRNA sequence 287 2e-74
6gb|AF093627.1|AF093627 Zea mays poly(ADP)-ribose polymerase (PAR... 287 2e-74
7dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 186 6e-44
8dbj|AP005247.3| Oryza sativa (japonica cultivar-group) genomic D... 186 6e-44
9ref|NM_179834.1| Arabidopsis thaliana DNA binding / NAD+ ADP-rib... 72 2e-09
10gb|AY150460.1| Arabidopsis thaliana putative poly(ADP-ribose) po... 72 2e-09
11gb|AY091061.1| Arabidopsis thaliana putative poly (ADP-ribose) p... 72 2e-09
12emb|AJ131705.1|ATH131705 Arabidopsis thaliana mRNA for poly(ADP-... 72 2e-09
13gb|AC006593.5| Arabidopsis thaliana chromosome 2 clone F16D14 ma... 44 0.53
14emb|AL590522.7| Mouse DNA sequence from clone RP23-117C5 on chro... 42 2.1
15emb|AL732408.4| Mouse DNA sequence from clone RP23-135A24 on chr... 42 2.1
16gb|AC138526.23| Medicago truncatula clone mth2-17n24, complete s... 42 2.1
17gb|AC148762.2| Medicago truncatula chromosome 7 BAC clone mth2-1... 42 2.1
18gb|CP000112.1| Desulfovibrio desulfuricans G20, complete genome 40 8.3
19ref|XM_416613.1| PREDICTED: Gallus gallus similar to FLJ20432 pr... 40 8.3
20gb|AC147322.2| Pan troglodytes BAC clone RP43-41H22 from 7, comp... 40 8.3
21gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 40 8.3
22gb|AC004549.1| Homo sapiens BAC clone CTA-459N13 from 7, complet... 40 8.3
23gb|AC132214.1| Genomic sequence for Oryza sativa, Nipponbare str... 40 8.3
24gb|AC093928.2| Homo sapiens chromosome 3 clone RP11-241K3, compl... 40 8.3
25gb|AC123568.1| Genomic sequence for Oryza sativa, Nipponbare str... 40 8.3
26gb|AC097358.2| Homo sapiens chromosome 3 clone RP11-157F20, comp... 40 8.3
27gb|AC016525.11| Homo sapiens chromosome 15 clone RP11-358M11 map... 40 8.3
28gb|AC078948.11| Oryza sativa chromosome 10 BAC OSJNBa0001K12 gen... 40 8.3
29gb|AC093211.3| Homo sapiens chromosome 5 clone CTD-2020P3, compl... 40 8.3
30gb|AC147316.4| Pan troglodytes BAC clone RP43-49H2 from chromoso... 40 8.3
31gb|AC016652.6| Homo sapiens chromosome 5 clone RPCI-1_29O12, com... 40 8.3
32gb|AC008131.25| Homo sapiens chromosome 15 clone ctd-2265b18 map... 40 8.3
33gb|AC026749.5|AC026749 Homo sapiens chromosome 5 clone RP11-415K... 40 8.3
34emb|CR352607.1| Gallus gallus finished cDNA, clone ChEST148a8 40 8.3
35dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.3
36dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.3
37gb|AC010627.7| Homo sapiens chromosome 5 clone CTD-2165H16, comp... 40 8.3
38gb|AC119797.2| Oryza sativa (japonica cultivar-group) chromosome... 40 8.3
39emb|BX935558.1| Gallus gallus finished cDNA, clone ChEST81n13 40 8.3
40gb|AC103895.3| Papio anubis clone RP41-397E13, complete sequence 40 8.3
41gb|AC016656.5|AC016656 Homo sapiens chromosome 5 clone RPCI-1_4M... 40 8.3
42gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 40 8.3 
>dbj|AK106540.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-108-D11, full
            insert sequence
          Length = 1964

 Score =  351 bits (177), Expect = 2e-93
 Identities = 288/325 (88%)
 Strand = Plus / Minus

                                                                        
Query: 285  accttcaacaagaactgcatcttcacctgagctgtgttgtacactatatactcgttgtac 344
            |||||||||||| |||||||||||||||| | ||| ||||| || |||||||| ||||||
Sbjct: 1631 accttcaacaagtactgcatcttcacctgggatgtattgtagacaatatactcattgtac 1572

                                                                        
Query: 345  agaagctcagatgccctgatagatgctggcactggcttgccacaaggcacgacgacatca 404
            | ||||||||||| | |||||||||||||||||||||| || || ||||| || ||||||
Sbjct: 1571 ataagctcagatgtcttgatagatgctggcactggctttccgcatggcaccacaacatca 1512

                                                                        
Query: 405  tccctccatttaacaaactccgactctagtggcacagttttgcctaagcccttggtcgaa 464
            |||||||||||  ||||||| ||||| || ||||| ||||||||||||||||||||||| 
Sbjct: 1511 tccctccatttcgcaaactcagactcgagcggcacggttttgcctaagcccttggtcgag 1452

                                                                        
Query: 465  tgcttccctcttggaggtttgtccattggcgttgcttttttcagttcatgcatgtctcct 524
            || ||||||||||||||||||||||| | ||| ||||| |||||||||| |||||| |||
Sbjct: 1451 tgtttccctcttggaggtttgtccatggacgtggctttcttcagttcatacatgtcacct 1392

                                                                        
Query: 525  agagcaacctcagaaagaagcatcaagccagtcggattttttctatccacataacaatac 584
            ||||||||||| ||||||||||||||||||   ||||| || |||||||| |||||||| 
Sbjct: 1391 agagcaacctcggaaagaagcatcaagccaactggattcttcctatccacgtaacaatat 1332

                                     
Query: 585  tgtgcactcttgcttactaaatctg 609
            |||||||||||||||||||||||||
Sbjct: 1331 tgtgcactcttgcttactaaatctg 1307
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>ref|XM_477671.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 3292

 Score =  343 bits (173), Expect = 4e-91
 Identities = 287/325 (88%)
 Strand = Plus / Minus

                                                                        
Query: 285  accttcaacaagaactgcatcttcacctgagctgtgttgtacactatatactcgttgtac 344
            |||||||||||| |||||||||||||||| | ||| ||||| || |||||||| ||||||
Sbjct: 2996 accttcaacaagtactgcatcttcacctgggatgtattgtagacaatatactcattgtac 2937

                                                                        
Query: 345  agaagctcagatgccctgatagatgctggcactggcttgccacaaggcacgacgacatca 404
            | ||||||||||| | |||||||||||||||||||||| || || ||||| || ||||||
Sbjct: 2936 ataagctcagatgtcttgatagatgctggcactggctttccgcatggcaccacaacatca 2877

                                                                        
Query: 405  tccctccatttaacaaactccgactctagtggcacagttttgcctaagcccttggtcgaa 464
            |||||||||||  ||||||| ||||| || ||||| ||||||||||||||||||||||| 
Sbjct: 2876 tccctccatttcgcaaactcagactcgagcggcacggttttgcctaagcccttggtcgag 2817

                                                                        
Query: 465  tgcttccctcttggaggtttgtccattggcgttgcttttttcagttcatgcatgtctcct 524
            || ||||||||||||||||||||||| | ||| ||||| |||||||||| |||||| |||
Sbjct: 2816 tgtttccctcttggaggtttgtccatggacgtggctttcttcagttcatacatgtcacct 2757

                                                                        
Query: 525  agagcaacctcagaaagaagcatcaagccagtcggattttttctatccacataacaatac 584
            ||||||||||| |||||||||||||| |||   ||||| || |||||||| |||||||| 
Sbjct: 2756 agagcaacctcggaaagaagcatcaaaccaactggattcttcctatccacgtaacaatat 2697

                                     
Query: 585  tgtgcactcttgcttactaaatctg 609
            |||||||||||||||||||||||||
Sbjct: 2696 tgtgcactcttgcttactaaatctg 2672
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>dbj|AK103479.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033130E20, full
            insert sequence
          Length = 3292

 Score =  343 bits (173), Expect = 4e-91
 Identities = 287/325 (88%)
 Strand = Plus / Minus

                                                                        
Query: 285  accttcaacaagaactgcatcttcacctgagctgtgttgtacactatatactcgttgtac 344
            |||||||||||| |||||||||||||||| | ||| ||||| || |||||||| ||||||
Sbjct: 2996 accttcaacaagtactgcatcttcacctgggatgtattgtagacaatatactcattgtac 2937

                                                                        
Query: 345  agaagctcagatgccctgatagatgctggcactggcttgccacaaggcacgacgacatca 404
            | ||||||||||| | |||||||||||||||||||||| || || ||||| || ||||||
Sbjct: 2936 ataagctcagatgtcttgatagatgctggcactggctttccgcatggcaccacaacatca 2877

                                                                        
Query: 405  tccctccatttaacaaactccgactctagtggcacagttttgcctaagcccttggtcgaa 464
            |||||||||||  ||||||| ||||| || ||||| ||||||||||||||||||||||| 
Sbjct: 2876 tccctccatttcgcaaactcagactcgagcggcacggttttgcctaagcccttggtcgag 2817

                                                                        
Query: 465  tgcttccctcttggaggtttgtccattggcgttgcttttttcagttcatgcatgtctcct 524
            || ||||||||||||||||||||||| | ||| ||||| |||||||||| |||||| |||
Sbjct: 2816 tgtttccctcttggaggtttgtccatggacgtggctttcttcagttcatacatgtcacct 2757

                                                                        
Query: 525  agagcaacctcagaaagaagcatcaagccagtcggattttttctatccacataacaatac 584
            ||||||||||| |||||||||||||| |||   ||||| || |||||||| |||||||| 
Sbjct: 2756 agagcaacctcggaaagaagcatcaaaccaactggattcttcctatccacgtaacaatat 2697

                                     
Query: 585  tgtgcactcttgcttactaaatctg 609
            |||||||||||||||||||||||||
Sbjct: 2696 tgtgcactcttgcttactaaatctg 2672
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>emb|AJ222589.1|ZMPARP2 Zea mays mRNA for poly(ADP-ribose) polymerase (3211bp)
          Length = 3211

 Score =  287 bits (145), Expect = 2e-74
 Identities = 280/325 (86%)
 Strand = Plus / Minus

                                                                        
Query: 285  accttcaacaagaactgcatcttcacctgagctgtgttgtacactatatactcgttgtac 344
            ||||||| ||||||||||||||||||||| | ||||||||| || || ||||| ||||||
Sbjct: 3000 accttcagcaagaactgcatcttcacctgggatgtgttgtagacgatgtactcattgtac 2941

                                                                        
Query: 345  agaagctcagatgccctgatagatgctggcactggcttgccacaaggcacgacgacatca 404
            |  || |||||   ||| || |||| |||||| |||||||| || || || |||||||||
Sbjct: 2940 atgagttcagagctcctaattgatgatggcaccggcttgccgcagggaactacgacatca 2881

                                                                        
Query: 405  tccctccatttaacaaactccgactctagtggcacagttttgcctaagcccttggtcgaa 464
            |||||||| || |||||||| ||||| |||||||| ||||||||||| ||||||||||||
Sbjct: 2880 tccctccacttcacaaactctgactccagtggcacggttttgcctaatcccttggtcgaa 2821

                                                                        
Query: 465  tgcttccctcttggaggtttgtccattggcgttgcttttttcagttcatgcatgtctcct 524
            |||||||||||||||||||||||||| | ||| ||||| || ||||||| ||||||||||
Sbjct: 2820 tgcttccctcttggaggtttgtccatggacgtggctttctttagttcatacatgtctcct 2761

                                                                        
Query: 525  agagcaacctcagaaagaagcatcaagccagtcggattttttctatccacataacaatac 584
            | |||||||||||||||||||||||| ||    ||||| || |||||||||||||| || 
Sbjct: 2760 aaagcaacctcagaaagaagcatcaaacctacaggattattcctatccacataacagtat 2701

                                     
Query: 585  tgtgcactcttgcttactaaatctg 609
            ||||| ||||||||||||| |||||
Sbjct: 2700 tgtgcgctcttgcttactagatctg 2676
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>gb|AY110247.1| Zea mays CL1689_1 mRNA sequence
          Length = 3278

 Score =  287 bits (145), Expect = 2e-74
 Identities = 280/325 (86%)
 Strand = Plus / Minus

                                                                        
Query: 285  accttcaacaagaactgcatcttcacctgagctgtgttgtacactatatactcgttgtac 344
            ||||||| ||||||||||||||||||||| | ||||||||| || || ||||| ||||||
Sbjct: 3020 accttcagcaagaactgcatcttcacctgggatgtgttgtagacgatgtactcattgtac 2961

                                                                        
Query: 345  agaagctcagatgccctgatagatgctggcactggcttgccacaaggcacgacgacatca 404
            |  || |||||   ||| || |||| |||||| |||||||| || || || |||||||||
Sbjct: 2960 atgagttcagagctcctaattgatgatggcaccggcttgccgcagggaactacgacatca 2901

                                                                        
Query: 405  tccctccatttaacaaactccgactctagtggcacagttttgcctaagcccttggtcgaa 464
            |||||||| || |||||||| ||||| |||||||| ||||||||||| ||||||||||||
Sbjct: 2900 tccctccacttcacaaactctgactccagtggcacggttttgcctaatcccttggtcgaa 2841

                                                                        
Query: 465  tgcttccctcttggaggtttgtccattggcgttgcttttttcagttcatgcatgtctcct 524
            |||||||||||||||||||||||||| | ||| ||||| || ||||||| ||||||||||
Sbjct: 2840 tgcttccctcttggaggtttgtccatggacgtggctttctttagttcatacatgtctcct 2781

                                                                        
Query: 525  agagcaacctcagaaagaagcatcaagccagtcggattttttctatccacataacaatac 584
            | |||||||||||||||||||||||| ||    ||||| || |||||||||||||| || 
Sbjct: 2780 aaagcaacctcagaaagaagcatcaaacctacaggattattcctatccacataacagtat 2721

                                     
Query: 585  tgtgcactcttgcttactaaatctg 609
            ||||| ||||||||||||| |||||
Sbjct: 2720 tgtgcgctcttgcttactagatctg 2696
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>gb|AF093627.1|AF093627 Zea mays poly(ADP)-ribose polymerase (PARP1) mRNA, complete cds
          Length = 3285

 Score =  287 bits (145), Expect = 2e-74
 Identities = 280/325 (86%)
 Strand = Plus / Minus

                                                                        
Query: 285  accttcaacaagaactgcatcttcacctgagctgtgttgtacactatatactcgttgtac 344
            ||||||| ||||||||||||||||||||| | ||||||||| || || ||||| ||||||
Sbjct: 3020 accttcagcaagaactgcatcttcacctgggatgtgttgtagacgatgtactcattgtac 2961

                                                                        
Query: 345  agaagctcagatgccctgatagatgctggcactggcttgccacaaggcacgacgacatca 404
            |  || |||||   ||| || |||| |||||| |||||||| || || || |||||||||
Sbjct: 2960 atgagttcagagctcctaattgatgatggcaccggcttgccgcagggaactacgacatca 2901

                                                                        
Query: 405  tccctccatttaacaaactccgactctagtggcacagttttgcctaagcccttggtcgaa 464
            |||||||| || |||||||| ||||| |||||||| ||||||||||| ||||||||||||
Sbjct: 2900 tccctccacttcacaaactctgactccagtggcacggttttgcctaatcccttggtcgaa 2841

                                                                        
Query: 465  tgcttccctcttggaggtttgtccattggcgttgcttttttcagttcatgcatgtctcct 524
            |||||||||||||||||||||||||| | ||| ||||| || ||||||| ||||||||||
Sbjct: 2840 tgcttccctcttggaggtttgtccatggacgtggctttctttagttcatacatgtctcct 2781

                                                                        
Query: 525  agagcaacctcagaaagaagcatcaagccagtcggattttttctatccacataacaatac 584
            | |||||||||||||||||||||||| ||    ||||| || |||||||||||||| || 
Sbjct: 2780 aaagcaacctcagaaagaagcatcaaacctacaggattattcctatccacataacagtat 2721

                                     
Query: 585  tgtgcactcttgcttactaaatctg 609
            ||||| ||||||||||||| |||||
Sbjct: 2720 tgtgcgctcttgcttactagatctg 2696
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score =  186 bits (94), Expect = 6e-44
 Identities = 151/170 (88%)
 Strand = Plus / Minus

                                                                            
Query: 321      ttgtacactatatactcgttgtacagaagctcagatgccctgatagatgctggcactggc 380
                ||||| || |||||||| ||||||| ||||||||||| | ||||||||||||||||||||
Sbjct: 12983114 ttgtagacaatatactcattgtacataagctcagatgtcttgatagatgctggcactggc 12983055

                                                                            
Query: 381      ttgccacaaggcacgacgacatcatccctccatttaacaaactccgactctagtggcaca 440
                || || || ||||| || |||||||||||||||||  ||||||| ||||| || ||||| 
Sbjct: 12983054 tttccgcatggcaccacaacatcatccctccatttcgcaaactcagactcgagcggcacg 12982995

                                                                  
Query: 441      gttttgcctaagcccttggtcgaatgcttccctcttggaggtttgtccat 490
                ||||||||||||||||||||||| || |||||||||||||||||||||||
Sbjct: 12982994 gttttgcctaagcccttggtcgagtgtttccctcttggaggtttgtccat 12982945



 Score =  127 bits (64), Expect = 5e-26
 Identities = 100/112 (89%)
 Strand = Plus / Minus

                                                                            
Query: 498      gcttttttcagttcatgcatgtctcctagagcaacctcagaaagaagcatcaagccagtc 557
                ||||| |||||||||| |||||| |||||||||||||| |||||||||||||| |||   
Sbjct: 12982667 gctttcttcagttcatacatgtcacctagagcaacctcggaaagaagcatcaaaccaact 12982608

                                                                    
Query: 558      ggattttttctatccacataacaatactgtgcactcttgcttactaaatctg 609
                ||||| || |||||||| |||||||| |||||||||||||||||||||||||
Sbjct: 12982607 ggattcttcctatccacgtaacaatattgtgcactcttgcttactaaatctg 12982556



 Score = 50.1 bits (25), Expect = 0.009
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                             
Query: 285      accttcaacaagaactgcatcttcacctg 313
                |||||||||||| ||||||||||||||||
Sbjct: 12983241 accttcaacaagtactgcatcttcacctg 12983213
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>dbj|AP005247.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OSJNBa0077F02
          Length = 172442

 Score =  186 bits (94), Expect = 6e-44
 Identities = 151/170 (88%)
 Strand = Plus / Minus

                                                                         
Query: 321   ttgtacactatatactcgttgtacagaagctcagatgccctgatagatgctggcactggc 380
             ||||| || |||||||| ||||||| ||||||||||| | ||||||||||||||||||||
Sbjct: 57411 ttgtagacaatatactcattgtacataagctcagatgtcttgatagatgctggcactggc 57352

                                                                         
Query: 381   ttgccacaaggcacgacgacatcatccctccatttaacaaactccgactctagtggcaca 440
             || || || ||||| || |||||||||||||||||  ||||||| ||||| || ||||| 
Sbjct: 57351 tttccgcatggcaccacaacatcatccctccatttcgcaaactcagactcgagcggcacg 57292

                                                               
Query: 441   gttttgcctaagcccttggtcgaatgcttccctcttggaggtttgtccat 490
             ||||||||||||||||||||||| || |||||||||||||||||||||||
Sbjct: 57291 gttttgcctaagcccttggtcgagtgtttccctcttggaggtttgtccat 57242



 Score =  127 bits (64), Expect = 5e-26
 Identities = 100/112 (89%)
 Strand = Plus / Minus

                                                                         
Query: 498   gcttttttcagttcatgcatgtctcctagagcaacctcagaaagaagcatcaagccagtc 557
             ||||| |||||||||| |||||| |||||||||||||| |||||||||||||| |||   
Sbjct: 56964 gctttcttcagttcatacatgtcacctagagcaacctcggaaagaagcatcaaaccaact 56905

                                                                 
Query: 558   ggattttttctatccacataacaatactgtgcactcttgcttactaaatctg 609
             ||||| || |||||||| |||||||| |||||||||||||||||||||||||
Sbjct: 56904 ggattcttcctatccacgtaacaatattgtgcactcttgcttactaaatctg 56853



 Score = 50.1 bits (25), Expect = 0.009
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                          
Query: 285   accttcaacaagaactgcatcttcacctg 313
             |||||||||||| ||||||||||||||||
Sbjct: 57538 accttcaacaagtactgcatcttcacctg 57510
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>ref|NM_179834.1| Arabidopsis thaliana DNA binding / NAD+ ADP-ribosyltransferase
            AT2G31320 mRNA, complete cds
          Length = 3327

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 60/68 (88%)
 Strand = Plus / Minus

                                                                        
Query: 288  ttcaacaagaactgcatcttcacctgagctgtgttgtacactatatactcgttgtacaga 347
            |||||||||||||||| ||||||||| ||||| | ||| || |||||||| ||||||| |
Sbjct: 3077 ttcaacaagaactgcaacttcacctgggctgtatcgtagacgatatactcattgtacata 3018

                    
Query: 348  agctcaga 355
            ||||||||
Sbjct: 3017 agctcaga 3010
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>gb|AY150460.1| Arabidopsis thaliana putative poly(ADP-ribose) polymerase (At2g31320)
            mRNA, complete cds
          Length = 2983

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 60/68 (88%)
 Strand = Plus / Minus

                                                                        
Query: 288  ttcaacaagaactgcatcttcacctgagctgtgttgtacactatatactcgttgtacaga 347
            |||||||||||||||| ||||||||| ||||| | ||| || |||||||| ||||||| |
Sbjct: 2927 ttcaacaagaactgcaacttcacctgggctgtatcgtagacgatatactcattgtacata 2868

                    
Query: 348  agctcaga 355
            ||||||||
Sbjct: 2867 agctcaga 2860
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>gb|AY091061.1| Arabidopsis thaliana putative poly (ADP-ribose) polymerase
            (At2g31320) mRNA, complete cds
          Length = 3308

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 60/68 (88%)
 Strand = Plus / Minus

                                                                        
Query: 288  ttcaacaagaactgcatcttcacctgagctgtgttgtacactatatactcgttgtacaga 347
            |||||||||||||||| ||||||||| ||||| | ||| || |||||||| ||||||| |
Sbjct: 3077 ttcaacaagaactgcaacttcacctgggctgtatcgtagacgatatactcattgtacata 3018

                    
Query: 348  agctcaga 355
            ||||||||
Sbjct: 3017 agctcaga 3010
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>emb|AJ131705.1|ATH131705 Arabidopsis thaliana mRNA for poly(ADP-ribose) polymerase
          Length = 3187

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 60/68 (88%)
 Strand = Plus / Minus

                                                                        
Query: 288  ttcaacaagaactgcatcttcacctgagctgtgttgtacactatatactcgttgtacaga 347
            |||||||||||||||| ||||||||| ||||| | ||| || |||||||| ||||||| |
Sbjct: 2937 ttcaacaagaactgcaacttcacctgggctgtatcgtagacgatatactcattgtacata 2878

                    
Query: 348  agctcaga 355
            ||||||||
Sbjct: 2877 agctcaga 2870
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>gb|AC006593.5| Arabidopsis thaliana chromosome 2 clone F16D14 map nga361, complete
             sequence
          Length = 84872

 Score = 44.1 bits (22), Expect = 0.53
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 288   ttcaacaagaactgcatcttcacctg 313
             |||||||||||||||| |||||||||
Sbjct: 72861 ttcaacaagaactgcaacttcacctg 72886
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>emb|AL590522.7| Mouse DNA sequence from clone RP23-117C5 on chromosome 13 Contains the
              Prlpc2, Prlpe and Prlpf genes for prolactin-like proteins
              C2 (1600019F10RIK, Prlpc beta), E (Prlpg) and F (Plp-f),
              and genes 1600032B14RIK, 1600017L04RIK (3830403L08RIK) and
              1600014J19RIK for novel proteins similar to prolactin,
              complete sequence
          Length = 211776

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 562    tttttctatccacataacaat 582
              |||||||||||||||||||||
Sbjct: 209987 tttttctatccacataacaat 209967
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>emb|AL732408.4| Mouse DNA sequence from clone RP23-135A24 on chromosome 13 Contains
           a prolactin (Prl) pseudogene and the 3' end of the Plfr
           gene for proliferin related protein, complete sequence
          Length = 29333

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 562 tttttctatccacataacaat 582
           |||||||||||||||||||||
Sbjct: 211 tttttctatccacataacaat 191
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>gb|AC138526.23| Medicago truncatula clone mth2-17n24, complete sequence
          Length = 124531

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 225   tcaactaacagtccaactcta 245
             |||||||||||||||||||||
Sbjct: 54498 tcaactaacagtccaactcta 54478
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>gb|AC148762.2| Medicago truncatula chromosome 7 BAC clone mth2-15p5, complete sequence
          Length = 136116

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 225    tcaactaacagtccaactcta 245
              |||||||||||||||||||||
Sbjct: 112436 tcaactaacagtccaactcta 112456
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>gb|CP000112.1| Desulfovibrio desulfuricans G20, complete genome
          Length = 3730232

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 126     gcggcacaacctaccttaagctgc 149
               ||||||||||||||||||| ||||
Sbjct: 2755626 gcggcacaacctaccttaaactgc 2755649
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>ref|XM_416613.1| PREDICTED: Gallus gallus similar to FLJ20432 protein (LOC418397),
            mRNA
          Length = 1517

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 498  gcttttttcagttcatgcat 517
            ||||||||||||||||||||
Sbjct: 1299 gcttttttcagttcatgcat 1280
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>gb|AC147322.2| Pan troglodytes BAC clone RP43-41H22 from 7, complete sequence
          Length = 174281

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 198  ctgagtactgacaacaaaga 217
            ||||||||||||||||||||
Sbjct: 8211 ctgagtactgacaacaaaga 8192
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 290     caacaagaactgcatcttca 309
               ||||||||||||||||||||
Sbjct: 5535115 caacaagaactgcatcttca 5535096



 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 195     ctactgagtactgacaacaa 214
               ||||||||||||||||||||
Sbjct: 3210978 ctactgagtactgacaacaa 3210959
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>gb|AC004549.1| Homo sapiens BAC clone CTA-459N13 from 7, complete sequence
          Length = 123891

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 198   ctgagtactgacaacaaaga 217
             ||||||||||||||||||||
Sbjct: 68067 ctgagtactgacaacaaaga 68048
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>gb|AC132214.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone
             OSJNBa0040M05, from chromosome 3, complete sequence
          Length = 153126

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 290   caacaagaactgcatcttca 309
             ||||||||||||||||||||
Sbjct: 78647 caacaagaactgcatcttca 78628
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>gb|AC093928.2| Homo sapiens chromosome 3 clone RP11-241K3, complete sequence
          Length = 165203

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 340   tgtacagaagctcagatgcc 359
             ||||||||||||||||||||
Sbjct: 18180 tgtacagaagctcagatgcc 18161
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>gb|AC123568.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OJ1345H02,
              from chromosome 3, complete sequence
          Length = 145290

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 290    caacaagaactgcatcttca 309
              ||||||||||||||||||||
Sbjct: 131709 caacaagaactgcatcttca 131690
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>gb|AC097358.2| Homo sapiens chromosome 3 clone RP11-157F20, complete sequence
          Length = 154606

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 340    tgtacagaagctcagatgcc 359
              ||||||||||||||||||||
Sbjct: 149291 tgtacagaagctcagatgcc 149272
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>gb|AC016525.11| Homo sapiens chromosome 15 clone RP11-358M11 map 15q21.3, complete
             sequence
          Length = 256019

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 201   agtactgacaacaaagaaga 220
             ||||||||||||||||||||
Sbjct: 90121 agtactgacaacaaagaaga 90140
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>gb|AC078948.11| Oryza sativa chromosome 10 BAC OSJNBa0001K12 genomic sequence, complete
             sequence
          Length = 144724

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 190   actagctactgagtactgac 209
             ||||||||||||||||||||
Sbjct: 95624 actagctactgagtactgac 95605
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>gb|AC093211.3| Homo sapiens chromosome 5 clone CTD-2020P3, complete sequence
          Length = 141894

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 367    atgctggcactggcttgcca 386
              ||||||||||||||||||||
Sbjct: 124140 atgctggcactggcttgcca 124159
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>gb|AC147316.4| Pan troglodytes BAC clone RP43-49H2 from chromosome 7, complete
             sequence
          Length = 209609

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 198   ctgagtactgacaacaaaga 217
             ||||||||||||||||||||
Sbjct: 87987 ctgagtactgacaacaaaga 87968
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>gb|AC016652.6| Homo sapiens chromosome 5 clone RPCI-1_29O12, complete sequence
          Length = 177640

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 367    atgctggcactggcttgcca 386
              ||||||||||||||||||||
Sbjct: 167757 atgctggcactggcttgcca 167738
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>gb|AC008131.25| Homo sapiens chromosome 15 clone ctd-2265b18 map 15q21, complete
             sequence
          Length = 131891

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 201   agtactgacaacaaagaaga 220
             ||||||||||||||||||||
Sbjct: 97095 agtactgacaacaaagaaga 97076
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>gb|AC026749.5|AC026749 Homo sapiens chromosome 5 clone RP11-415K6, complete sequence
          Length = 184777

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 367    atgctggcactggcttgcca 386
              ||||||||||||||||||||
Sbjct: 140666 atgctggcactggcttgcca 140685
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>emb|CR352607.1| Gallus gallus finished cDNA, clone ChEST148a8
          Length = 1517

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 498  gcttttttcagttcatgcat 517
            ||||||||||||||||||||
Sbjct: 1299 gcttttttcagttcatgcat 1280
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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 190      actagctactgagtactgac 209
                ||||||||||||||||||||
Sbjct: 17096712 actagctactgagtactgac 17096731
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
               sequence
          Length = 36192742

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 290     caacaagaactgcatcttca 309
               ||||||||||||||||||||
Sbjct: 5534330 caacaagaactgcatcttca 5534311



 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 195     ctactgagtactgacaacaa 214
               ||||||||||||||||||||
Sbjct: 3211089 ctactgagtactgacaacaa 3211070
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>gb|AC010627.7| Homo sapiens chromosome 5 clone CTD-2165H16, complete sequence
          Length = 135322

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 367   atgctggcactggcttgcca 386
             ||||||||||||||||||||
Sbjct: 74721 atgctggcactggcttgcca 74740
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>gb|AC119797.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone
             OSJNBa0083G16, complete sequence
          Length = 145590

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 195   ctactgagtactgacaacaa 214
             ||||||||||||||||||||
Sbjct: 35851 ctactgagtactgacaacaa 35832
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>emb|BX935558.1| Gallus gallus finished cDNA, clone ChEST81n13
          Length = 1486

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 498  gcttttttcagttcatgcat 517
            ||||||||||||||||||||
Sbjct: 1268 gcttttttcagttcatgcat 1249
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>gb|AC103895.3| Papio anubis clone RP41-397E13, complete sequence
          Length = 166686

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 198   ctgagtactgacaacaaaga 217
             ||||||||||||||||||||
Sbjct: 86308 ctgagtactgacaacaaaga 86289
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>gb|AC016656.5|AC016656 Homo sapiens chromosome 5 clone RPCI-1_4M11, complete sequence
          Length = 174309

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 367   atgctggcactggcttgcca 386
             ||||||||||||||||||||
Sbjct: 12506 atgctggcactggcttgcca 12525
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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 190      actagctactgagtactgac 209
                ||||||||||||||||||||
Sbjct: 17105752 actagctactgagtactgac 17105771


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,696,562
Number of Sequences: 3902068
Number of extensions: 4696562
Number of successful extensions: 79606
Number of sequences better than 10.0: 42
Number of HSP's better than 10.0 without gapping: 44
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 79369
Number of HSP's gapped (non-prelim): 231
length of query: 609
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 586
effective length of database: 17,143,297,704
effective search space: 10045972454544
effective search space used: 10045972454544
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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