| Clone Name | rbags26l01 |
|---|---|
| Clone Library Name | barley_pub |
>BABL_LILLO (P60496) Chemocyanin precursor (Basic blue protein) (Plantacyanin)| Length = 126 Score = 68.6 bits (166), Expect = 9e-12 Identities = 32/69 (46%), Positives = 44/69 (63%) Frame = -3 Query: 486 LVFKYXKELHDVTVLXGKGYRRCEVPRHSSKSWVMRTGNDQVTLRRGNNYFICGLPGHCD 307 LVFKY +H+V + GY+ C S S V ++G+D++TL RG NYFIC +PGHC Sbjct: 60 LVFKYNPAVHNVVSVPAGGYKSCTA---SPGSRVFKSGDDRITLSRGTNYFICSVPGHCQ 116 Query: 306 KNMKLAVKA 280 +K+AV A Sbjct: 117 GGLKIAVTA 125
>BABL_CUCSA (P00303) Basic blue protein (Cusacyanin) (Plantacyanin) (CBP)| Length = 96 Score = 62.4 bits (150), Expect = 6e-10 Identities = 28/69 (40%), Positives = 39/69 (56%) Frame = -3 Query: 486 LVFKYXKELHDVTVLXGKGYRRCEVPRHSSKSWVMRTGNDQVTLRRGNNYFICGLPGHCD 307 L+F Y +H+V V+ G+ C P + V +G DQ+ L +G +YFIC PGHC Sbjct: 30 LLFNYNPXMHNVVVVNQGGFSTCNTPAGAK---VYTSGRDQIKLPKGQSYFICNFPGHCQ 86 Query: 306 KNMKLAVKA 280 MK+AV A Sbjct: 87 SGMKIAVNA 95
>BABL_ARATH (Q8LG89) Putative basic blue protein precursor (Plantacyanin)| Length = 129 Score = 60.8 bits (146), Expect = 2e-09 Identities = 26/69 (37%), Positives = 39/69 (56%) Frame = -3 Query: 486 LVFKYXKELHDVTVLXGKGYRRCEVPRHSSKSWVMRTGNDQVTLRRGNNYFICGLPGHCD 307 LVF Y +H+V + Y C+ P + +G D++TL +G N+FIC P HC+ Sbjct: 63 LVFNYNPRMHNVVKVDSGSYNNCKTPTGAKP---YTSGKDRITLSKGQNFFICNFPNHCE 119 Query: 306 KNMKLAVKA 280 +MK+AV A Sbjct: 120 SDMKIAVTA 128
>STEL_RHUVE (P00302) Stellacyanin| Length = 107 Score = 50.4 bits (119), Expect = 2e-06 Identities = 23/68 (33%), Positives = 38/68 (55%), Gaps = 1/68 (1%) Frame = -3 Query: 486 LVFKYXKELHDVTVLXGKGYRRCEVPRHSSKSWVMRTGNDQVTLRR-GNNYFICGLPGHC 310 LVFKY + H+V + K Y+ C ++ TG++++ L+ G Y+ICG+P HC Sbjct: 37 LVFKYDRRFHNVDKVTQKNYQSCN---DTTPIASYNTGBBRINLKTVGQKYYICGVPKHC 93 Query: 309 DKNMKLAV 286 D K+ + Sbjct: 94 DLGQKVHI 101
>MAVI_CUCPE (P80728) Mavicyanin| Length = 108 Score = 47.8 bits (112), Expect = 2e-05 Identities = 23/69 (33%), Positives = 38/69 (55%), Gaps = 1/69 (1%) Frame = -3 Query: 486 LVFKYXKELHDVTVLXGKGYRRCEVPRHSSKSWVMRTGNDQVTLRR-GNNYFICGLPGHC 310 L+F Y + H+V + + ++ C SS + +G D + L+R G YF+CG+PGHC Sbjct: 35 LLFNYNNKFHNVLQVDQEQFKSCN---SSSPAASYTSGADSIPLKRPGTFYFLCGIPGHC 91 Query: 309 DKNMKLAVK 283 K+ +K Sbjct: 92 QLGQKVEIK 100
>BCP_PEA (Q41001) Blue copper protein precursor| Length = 189 Score = 44.3 bits (103), Expect = 2e-04 Identities = 25/69 (36%), Positives = 34/69 (49%), Gaps = 1/69 (1%) Frame = -3 Query: 486 LVFKYXKELHDVTVLXGKGYRRCEVPRHSSKSWVMRTGNDQVTLRR-GNNYFICGLPGHC 310 LVF Y H V + Y+ C S TG + L++ G +YFICG+PGH Sbjct: 56 LVFNYGAGAHTVDEVKESDYKSCTSGNSISTD---STGATTIPLKKAGKHYFICGVPGHS 112 Query: 309 DKNMKLAVK 283 MKL++K Sbjct: 113 TGGMKLSIK 121
>BCB2_ARATH (O80517) Uclacyanin-2 precursor (Uclacyanin-II) (Blue| copper-binding protein II) (BCB II) (Phytocyanin 2) Length = 202 Score = 43.5 bits (101), Expect = 3e-04 Identities = 30/70 (42%), Positives = 37/70 (52%), Gaps = 3/70 (4%) Frame = -3 Query: 486 LVFKYXKELHDVTVLXGKGYRRCEVPRHSSKSWVMRTGNDQVTLRR-GNNYFICGLPGHC 310 L FKY H V V+ GY C+ SS + G+ ++ L+ G NYFIC PGHC Sbjct: 57 LEFKYGSS-HTVDVVDKAGYDGCDA---SSSTENHSDGDTKIDLKTVGINYFICSTPGHC 112 Query: 309 DKN--MKLAV 286 N MKLAV Sbjct: 113 RTNGGMKLAV 122
>ENL1_ARATH (Q9SK27) Early nodulin-like protein 1 precursor (Phytocyanin-like| protein) Length = 176 Score = 33.9 bits (76), Expect = 0.24 Identities = 21/68 (30%), Positives = 30/68 (44%), Gaps = 1/68 (1%) Frame = -3 Query: 486 LVFKYXKELHDVTVLXGKGYRRCEVPRHSSKSWVMRTGNDQVTL-RRGNNYFICGLPGHC 310 +VF+Y V + + Y C + G +V L R G YFI G GHC Sbjct: 59 IVFRYESGKDSVLEVTKEAYNSCNTTNPLAN---YTDGETKVKLDRSGPFYFISGANGHC 115 Query: 309 DKNMKLAV 286 +K KL++ Sbjct: 116 EKGQKLSL 123
>NO552_SOYBN (Q02917) Early nodulin 55-2 precursor (N-55-2) (Nodulin-315)| Length = 187 Score = 32.7 bits (73), Expect = 0.53 Identities = 23/68 (33%), Positives = 28/68 (41%), Gaps = 1/68 (1%) Frame = -3 Query: 486 LVFKYXKELHDVTVLXGKGYRRCEVPRHSSKSWVMRTGNDQVTLRR-GNNYFICGLPGHC 310 L+FKY K V Y C V GN +V L + G +FI G HC Sbjct: 63 LIFKYEKRTESVHEGNETDYEGCNTV--GKYHIVFNGGNTKVMLTKPGFRHFISGNQSHC 120 Query: 309 DKNMKLAV 286 +KLAV Sbjct: 121 QMGLKLAV 128
>BAT2_RAT (Q6MG48) Large proline-rich protein BAT2 (HLA-B-associated transcript| 2) Length = 2161 Score = 32.3 bits (72), Expect = 0.70 Identities = 24/76 (31%), Positives = 35/76 (46%), Gaps = 5/76 (6%) Frame = -2 Query: 469 QGAPRRDGAGRQGVPAVRGAEAQQQELGDAHRERPGHAAQGQQLLHLR----PAGPLRQE 302 +G PRR G G + AV G + E + HR RP + +G++ R P GP+ E Sbjct: 1681 EGPPRRPG-GPSPLKAVPGESSSASEPSEPHRRRPPASHEGERKELPREQPLPPGPIGTE 1739 Query: 301 HEARRQGLVDPS-IRP 257 R +P +RP Sbjct: 1740 RSQRTDRGPEPGPLRP 1755
>GLT5_WHEAT (P10388) Glutenin, high molecular weight subunit DX5 precursor| Length = 839 Score = 32.0 bits (71), Expect = 0.91 Identities = 18/47 (38%), Positives = 26/47 (55%), Gaps = 1/47 (2%) Frame = -2 Query: 478 QVXQGAP-RRDGAGRQGVPAVRGAEAQQQELGDAHRERPGHAAQGQQ 341 Q+ QG ++ G G+QG +G + QQ G H ++PG QGQQ Sbjct: 593 QLGQGQQGQQPGQGQQGQQPAQGQQGQQPGQGQ-HGQQPGQGQQGQQ 638
>NO20_MEDTR (P93329) Early nodulin 20 precursor (N-20)| Length = 268 Score = 31.6 bits (70), Expect = 1.2 Identities = 20/68 (29%), Positives = 32/68 (47%), Gaps = 1/68 (1%) Frame = -3 Query: 486 LVFKYXKELHDVTVLXGKGYRRCEVPRHSSKSWVMRTGNDQVTLRR-GNNYFICGLPGHC 310 + F+Y + V + + Y RC + + GN V L++ G ++FI G HC Sbjct: 61 ITFQYNNKTESVHEVEEEDYDRCGIRGEHVDHY---DGNTMVVLKKTGIHHFISGKKRHC 117 Query: 309 DKNMKLAV 286 +KLAV Sbjct: 118 RLGLKLAV 125
>BCB1_ARATH (Q07488) Blue copper protein precursor (Blue copper-binding| protein) (AtBCB) (Stellacyanin) (Phytocyanin 1) Length = 196 Score = 30.8 bits (68), Expect = 2.0 Identities = 20/68 (29%), Positives = 29/68 (42%), Gaps = 1/68 (1%) Frame = -3 Query: 486 LVFKYXKELHDVTVLXGKGYRRCEVPRHSSKSWVMRTGNDQVTLRR-GNNYFICGLPGHC 310 L F + HDV V+ + CE + S V ++ L G YFIC + HC Sbjct: 57 LEFDFAAGRHDVAVVSEAAFENCEKEKPISHMTVPPV---KIMLNTTGPQYFICTVGDHC 113 Query: 309 DKNMKLAV 286 KL++ Sbjct: 114 RFGQKLSI 121
>APHE_STRGR (P18150) Streptomycin 3''-kinase (EC 2.7.1.87) (Streptomycin| 3''-phosphotransferase) (Streptomycin 6-phosphotransferase) (Streptomycin 6-kinase) Length = 272 Score = 30.4 bits (67), Expect = 2.7 Identities = 19/48 (39%), Positives = 23/48 (47%) Frame = +1 Query: 292 ELHVLVAVARQAADEVVVAPAQRDLVVPGAHHPALAAVPRHLAPPVPL 435 E+ V R+ D VV A RD+V GA HP V + L PP L Sbjct: 120 EVPVASCPFRRGLDSVV--DAARDVVARGAVHPEFLPVEQRLVPPAEL 165
>UMEC_ARMRU (P42849) Umecyanin (UMC)| Length = 115 Score = 30.4 bits (67), Expect = 2.7 Identities = 19/68 (27%), Positives = 30/68 (44%), Gaps = 1/68 (1%) Frame = -3 Query: 486 LVFKYXKELHDVTVLXGKGYRRCEVPRHSSKSWVMRTGNDQVTLRR-GNNYFICGLPGHC 310 L F + +HDV V+ + C+ S M T ++ L G Y+IC + HC Sbjct: 35 LEFDFAAGMHDVAVVTKDAFDNCKKENPISH---MTTPPVKIMLNTTGPQYYICTVGDHC 91 Query: 309 DKNMKLAV 286 KL++ Sbjct: 92 RVGQKLSI 99
>NO16_MEDTR (P93328) Early nodulin 16 precursor (N-16)| Length = 180 Score = 29.3 bits (64), Expect = 5.9 Identities = 22/69 (31%), Positives = 32/69 (46%), Gaps = 2/69 (2%) Frame = -3 Query: 486 LVFKYXKELHDVTVLXGKGYRRCEVPRHSSKSWVMR-TGNDQVTLRR-GNNYFICGLPGH 313 ++F+Y E V + Y C H++ V GN +V L + G +FI G H Sbjct: 61 ILFEYDNETESVHEVNEHDYIMC----HTNGEHVEHHDGNTKVVLDKIGVYHFISGTKRH 116 Query: 312 CDKNMKLAV 286 C +KLAV Sbjct: 117 CKMGLKLAV 125
>MCM1_YEAST (P11746) Pheromone receptor transcription factor (GRM/PRTF protein)| Length = 286 Score = 29.3 bits (64), Expect = 5.9 Identities = 20/62 (32%), Positives = 30/62 (48%) Frame = -2 Query: 451 DGAGRQGVPAVRGAEAQQQELGDAHRERPGHAAQGQQLLHLRPAGPLRQEHEARRQGLVD 272 DG Q + QQQ++ +AH GH Q Q PAG L+QE +++ G + Sbjct: 117 DGNDMQRQQPQQQQPQQQQQVLNAHANSLGHLNQDQV-----PAGALKQEVKSQLLGGAN 171 Query: 271 PS 266 P+ Sbjct: 172 PN 173
>KTHY_BDEBA (Q6MP28) Thymidylate kinase (EC 2.7.4.9) (dTMP kinase)| Length = 214 Score = 29.3 bits (64), Expect = 5.9 Identities = 24/75 (32%), Positives = 33/75 (44%), Gaps = 8/75 (10%) Frame = -2 Query: 451 DGAGRQGVPAVRGAEAQQQELGDAHRERPGHAAQGQQL--LHLRPAGPL---RQE---HE 296 DG+G+ + A E Q + + PG G ++ + LR GP R E +E Sbjct: 14 DGSGKSSLMAALERELQNRAINFLRTREPGGTPLGDEIRNMILRKEGPAPTPRTELLLYE 73 Query: 295 ARRQGLVDPSIRPHL 251 A R VD IRP L Sbjct: 74 ASRSQHVDQVIRPAL 88
>JHD1_DROME (Q9VHH9) JmjC domain-containing histone demethylation protein 1 (EC| 1.14.11.-) Length = 1345 Score = 28.9 bits (63), Expect = 7.7 Identities = 22/113 (19%), Positives = 41/113 (36%), Gaps = 1/113 (0%) Frame = -2 Query: 481 VQVXQGAPRRDGAGRQGVPAVRGAEAQQQELGDAHRERPGHAAQGQQLLHLRPAGPLRQE 302 V+ G +G G + + A+ G+ +G L + L + Sbjct: 996 VRPASGTGSSSSSGNGGSASATNGISNGSNQSGANSCGAGNGERGTNNGGLSGSNGLGNQ 1055 Query: 301 HEARRQGL-VDPSIRPHLMHVRRTSSSIDACSACFAWPSITVQALLGSRVNLS 146 H + Q L +DP++ + + + CS C W + V L ++N S Sbjct: 1056 HYSSSQNLALDPTVLKIIFRYLPQDTLVTCCSVCKVWSNAAVDPDLWKKMNCS 1108
>RHPN2_MOUSE (Q8BWR8) Rhophilin-2 (GTP-Rho-binding protein 2)| Length = 686 Score = 28.9 bits (63), Expect = 7.7 Identities = 18/45 (40%), Positives = 23/45 (51%) Frame = +1 Query: 274 LPGLDGELHVLVAVARQAADEVVVAPAQRDLVVPGAHHPALAAVP 408 LPG+ E VLV VA++AA VA A R L + P +P Sbjct: 297 LPGIQNEFFVLVKVAQEAAK---VAEAYRQLHAAMSQEPVKENIP 338 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 59,503,573 Number of Sequences: 219361 Number of extensions: 1176158 Number of successful extensions: 3763 Number of sequences better than 10.0: 20 Number of HSP's better than 10.0 without gapping: 3624 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3756 length of database: 80,573,946 effective HSP length: 103 effective length of database: 57,979,763 effective search space used: 3420806017 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)