ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags26l01
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1BABL_LILLO (P60496) Chemocyanin precursor (Basic blue protein) (... 69 9e-12
2BABL_CUCSA (P00303) Basic blue protein (Cusacyanin) (Plantacyani... 62 6e-10
3BABL_ARATH (Q8LG89) Putative basic blue protein precursor (Plant... 61 2e-09
4STEL_RHUVE (P00302) Stellacyanin 50 2e-06
5MAVI_CUCPE (P80728) Mavicyanin 48 2e-05
6BCP_PEA (Q41001) Blue copper protein precursor 44 2e-04
7BCB2_ARATH (O80517) Uclacyanin-2 precursor (Uclacyanin-II) (Blue... 44 3e-04
8ENL1_ARATH (Q9SK27) Early nodulin-like protein 1 precursor (Phyt... 34 0.24
9NO552_SOYBN (Q02917) Early nodulin 55-2 precursor (N-55-2) (Nodu... 33 0.53
10BAT2_RAT (Q6MG48) Large proline-rich protein BAT2 (HLA-B-associa... 32 0.70
11GLT5_WHEAT (P10388) Glutenin, high molecular weight subunit DX5 ... 32 0.91
12NO20_MEDTR (P93329) Early nodulin 20 precursor (N-20) 32 1.2
13BCB1_ARATH (Q07488) Blue copper protein precursor (Blue copper-b... 31 2.0
14APHE_STRGR (P18150) Streptomycin 3''-kinase (EC 2.7.1.87) (Strep... 30 2.7
15UMEC_ARMRU (P42849) Umecyanin (UMC) 30 2.7
16NO16_MEDTR (P93328) Early nodulin 16 precursor (N-16) 29 5.9
17MCM1_YEAST (P11746) Pheromone receptor transcription factor (GRM... 29 5.9
18KTHY_BDEBA (Q6MP28) Thymidylate kinase (EC 2.7.4.9) (dTMP kinase) 29 5.9
19JHD1_DROME (Q9VHH9) JmjC domain-containing histone demethylation... 29 7.7
20RHPN2_MOUSE (Q8BWR8) Rhophilin-2 (GTP-Rho-binding protein 2) 29 7.7

>BABL_LILLO (P60496) Chemocyanin precursor (Basic blue protein) (Plantacyanin)|
          Length = 126

 Score = 68.6 bits (166), Expect = 9e-12
 Identities = 32/69 (46%), Positives = 44/69 (63%)
 Frame = -3

Query: 486 LVFKYXKELHDVTVLXGKGYRRCEVPRHSSKSWVMRTGNDQVTLRRGNNYFICGLPGHCD 307
           LVFKY   +H+V  +   GY+ C     S  S V ++G+D++TL RG NYFIC +PGHC 
Sbjct: 60  LVFKYNPAVHNVVSVPAGGYKSCTA---SPGSRVFKSGDDRITLSRGTNYFICSVPGHCQ 116

Query: 306 KNMKLAVKA 280
             +K+AV A
Sbjct: 117 GGLKIAVTA 125



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>BABL_CUCSA (P00303) Basic blue protein (Cusacyanin) (Plantacyanin) (CBP)|
          Length = 96

 Score = 62.4 bits (150), Expect = 6e-10
 Identities = 28/69 (40%), Positives = 39/69 (56%)
 Frame = -3

Query: 486 LVFKYXKELHDVTVLXGKGYRRCEVPRHSSKSWVMRTGNDQVTLRRGNNYFICGLPGHCD 307
           L+F Y   +H+V V+   G+  C  P  +    V  +G DQ+ L +G +YFIC  PGHC 
Sbjct: 30  LLFNYNPXMHNVVVVNQGGFSTCNTPAGAK---VYTSGRDQIKLPKGQSYFICNFPGHCQ 86

Query: 306 KNMKLAVKA 280
             MK+AV A
Sbjct: 87  SGMKIAVNA 95



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>BABL_ARATH (Q8LG89) Putative basic blue protein precursor (Plantacyanin)|
          Length = 129

 Score = 60.8 bits (146), Expect = 2e-09
 Identities = 26/69 (37%), Positives = 39/69 (56%)
 Frame = -3

Query: 486 LVFKYXKELHDVTVLXGKGYRRCEVPRHSSKSWVMRTGNDQVTLRRGNNYFICGLPGHCD 307
           LVF Y   +H+V  +    Y  C+ P  +       +G D++TL +G N+FIC  P HC+
Sbjct: 63  LVFNYNPRMHNVVKVDSGSYNNCKTPTGAKP---YTSGKDRITLSKGQNFFICNFPNHCE 119

Query: 306 KNMKLAVKA 280
            +MK+AV A
Sbjct: 120 SDMKIAVTA 128



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>STEL_RHUVE (P00302) Stellacyanin|
          Length = 107

 Score = 50.4 bits (119), Expect = 2e-06
 Identities = 23/68 (33%), Positives = 38/68 (55%), Gaps = 1/68 (1%)
 Frame = -3

Query: 486 LVFKYXKELHDVTVLXGKGYRRCEVPRHSSKSWVMRTGNDQVTLRR-GNNYFICGLPGHC 310
           LVFKY +  H+V  +  K Y+ C     ++      TG++++ L+  G  Y+ICG+P HC
Sbjct: 37  LVFKYDRRFHNVDKVTQKNYQSCN---DTTPIASYNTGBBRINLKTVGQKYYICGVPKHC 93

Query: 309 DKNMKLAV 286
           D   K+ +
Sbjct: 94  DLGQKVHI 101



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>MAVI_CUCPE (P80728) Mavicyanin|
          Length = 108

 Score = 47.8 bits (112), Expect = 2e-05
 Identities = 23/69 (33%), Positives = 38/69 (55%), Gaps = 1/69 (1%)
 Frame = -3

Query: 486 LVFKYXKELHDVTVLXGKGYRRCEVPRHSSKSWVMRTGNDQVTLRR-GNNYFICGLPGHC 310
           L+F Y  + H+V  +  + ++ C     SS +    +G D + L+R G  YF+CG+PGHC
Sbjct: 35  LLFNYNNKFHNVLQVDQEQFKSCN---SSSPAASYTSGADSIPLKRPGTFYFLCGIPGHC 91

Query: 309 DKNMKLAVK 283
               K+ +K
Sbjct: 92  QLGQKVEIK 100



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>BCP_PEA (Q41001) Blue copper protein precursor|
          Length = 189

 Score = 44.3 bits (103), Expect = 2e-04
 Identities = 25/69 (36%), Positives = 34/69 (49%), Gaps = 1/69 (1%)
 Frame = -3

Query: 486 LVFKYXKELHDVTVLXGKGYRRCEVPRHSSKSWVMRTGNDQVTLRR-GNNYFICGLPGHC 310
           LVF Y    H V  +    Y+ C      S      TG   + L++ G +YFICG+PGH 
Sbjct: 56  LVFNYGAGAHTVDEVKESDYKSCTSGNSISTD---STGATTIPLKKAGKHYFICGVPGHS 112

Query: 309 DKNMKLAVK 283
              MKL++K
Sbjct: 113 TGGMKLSIK 121



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>BCB2_ARATH (O80517) Uclacyanin-2 precursor (Uclacyanin-II) (Blue|
           copper-binding protein II) (BCB II) (Phytocyanin 2)
          Length = 202

 Score = 43.5 bits (101), Expect = 3e-04
 Identities = 30/70 (42%), Positives = 37/70 (52%), Gaps = 3/70 (4%)
 Frame = -3

Query: 486 LVFKYXKELHDVTVLXGKGYRRCEVPRHSSKSWVMRTGNDQVTLRR-GNNYFICGLPGHC 310
           L FKY    H V V+   GY  C+    SS +     G+ ++ L+  G NYFIC  PGHC
Sbjct: 57  LEFKYGSS-HTVDVVDKAGYDGCDA---SSSTENHSDGDTKIDLKTVGINYFICSTPGHC 112

Query: 309 DKN--MKLAV 286
             N  MKLAV
Sbjct: 113 RTNGGMKLAV 122



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>ENL1_ARATH (Q9SK27) Early nodulin-like protein 1 precursor (Phytocyanin-like|
           protein)
          Length = 176

 Score = 33.9 bits (76), Expect = 0.24
 Identities = 21/68 (30%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
 Frame = -3

Query: 486 LVFKYXKELHDVTVLXGKGYRRCEVPRHSSKSWVMRTGNDQVTL-RRGNNYFICGLPGHC 310
           +VF+Y      V  +  + Y  C      +       G  +V L R G  YFI G  GHC
Sbjct: 59  IVFRYESGKDSVLEVTKEAYNSCNTTNPLAN---YTDGETKVKLDRSGPFYFISGANGHC 115

Query: 309 DKNMKLAV 286
           +K  KL++
Sbjct: 116 EKGQKLSL 123



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>NO552_SOYBN (Q02917) Early nodulin 55-2 precursor (N-55-2) (Nodulin-315)|
          Length = 187

 Score = 32.7 bits (73), Expect = 0.53
 Identities = 23/68 (33%), Positives = 28/68 (41%), Gaps = 1/68 (1%)
 Frame = -3

Query: 486 LVFKYXKELHDVTVLXGKGYRRCEVPRHSSKSWVMRTGNDQVTLRR-GNNYFICGLPGHC 310
           L+FKY K    V       Y  C          V   GN +V L + G  +FI G   HC
Sbjct: 63  LIFKYEKRTESVHEGNETDYEGCNTV--GKYHIVFNGGNTKVMLTKPGFRHFISGNQSHC 120

Query: 309 DKNMKLAV 286
              +KLAV
Sbjct: 121 QMGLKLAV 128



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>BAT2_RAT (Q6MG48) Large proline-rich protein BAT2 (HLA-B-associated transcript|
            2)
          Length = 2161

 Score = 32.3 bits (72), Expect = 0.70
 Identities = 24/76 (31%), Positives = 35/76 (46%), Gaps = 5/76 (6%)
 Frame = -2

Query: 469  QGAPRRDGAGRQGVPAVRGAEAQQQELGDAHRERPGHAAQGQQLLHLR----PAGPLRQE 302
            +G PRR G G   + AV G  +   E  + HR RP  + +G++    R    P GP+  E
Sbjct: 1681 EGPPRRPG-GPSPLKAVPGESSSASEPSEPHRRRPPASHEGERKELPREQPLPPGPIGTE 1739

Query: 301  HEARRQGLVDPS-IRP 257
               R     +P  +RP
Sbjct: 1740 RSQRTDRGPEPGPLRP 1755



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>GLT5_WHEAT (P10388) Glutenin, high molecular weight subunit DX5 precursor|
          Length = 839

 Score = 32.0 bits (71), Expect = 0.91
 Identities = 18/47 (38%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
 Frame = -2

Query: 478 QVXQGAP-RRDGAGRQGVPAVRGAEAQQQELGDAHRERPGHAAQGQQ 341
           Q+ QG   ++ G G+QG    +G + QQ   G  H ++PG   QGQQ
Sbjct: 593 QLGQGQQGQQPGQGQQGQQPAQGQQGQQPGQGQ-HGQQPGQGQQGQQ 638



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>NO20_MEDTR (P93329) Early nodulin 20 precursor (N-20)|
          Length = 268

 Score = 31.6 bits (70), Expect = 1.2
 Identities = 20/68 (29%), Positives = 32/68 (47%), Gaps = 1/68 (1%)
 Frame = -3

Query: 486 LVFKYXKELHDVTVLXGKGYRRCEVPRHSSKSWVMRTGNDQVTLRR-GNNYFICGLPGHC 310
           + F+Y  +   V  +  + Y RC +       +    GN  V L++ G ++FI G   HC
Sbjct: 61  ITFQYNNKTESVHEVEEEDYDRCGIRGEHVDHY---DGNTMVVLKKTGIHHFISGKKRHC 117

Query: 309 DKNMKLAV 286
              +KLAV
Sbjct: 118 RLGLKLAV 125



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>BCB1_ARATH (Q07488) Blue copper protein precursor (Blue copper-binding|
           protein) (AtBCB) (Stellacyanin) (Phytocyanin 1)
          Length = 196

 Score = 30.8 bits (68), Expect = 2.0
 Identities = 20/68 (29%), Positives = 29/68 (42%), Gaps = 1/68 (1%)
 Frame = -3

Query: 486 LVFKYXKELHDVTVLXGKGYRRCEVPRHSSKSWVMRTGNDQVTLRR-GNNYFICGLPGHC 310
           L F +    HDV V+    +  CE  +  S   V      ++ L   G  YFIC +  HC
Sbjct: 57  LEFDFAAGRHDVAVVSEAAFENCEKEKPISHMTVPPV---KIMLNTTGPQYFICTVGDHC 113

Query: 309 DKNMKLAV 286
               KL++
Sbjct: 114 RFGQKLSI 121



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>APHE_STRGR (P18150) Streptomycin 3''-kinase (EC 2.7.1.87) (Streptomycin|
           3''-phosphotransferase) (Streptomycin
           6-phosphotransferase) (Streptomycin 6-kinase)
          Length = 272

 Score = 30.4 bits (67), Expect = 2.7
 Identities = 19/48 (39%), Positives = 23/48 (47%)
 Frame = +1

Query: 292 ELHVLVAVARQAADEVVVAPAQRDLVVPGAHHPALAAVPRHLAPPVPL 435
           E+ V     R+  D VV   A RD+V  GA HP    V + L PP  L
Sbjct: 120 EVPVASCPFRRGLDSVV--DAARDVVARGAVHPEFLPVEQRLVPPAEL 165



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>UMEC_ARMRU (P42849) Umecyanin (UMC)|
          Length = 115

 Score = 30.4 bits (67), Expect = 2.7
 Identities = 19/68 (27%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
 Frame = -3

Query: 486 LVFKYXKELHDVTVLXGKGYRRCEVPRHSSKSWVMRTGNDQVTLRR-GNNYFICGLPGHC 310
           L F +   +HDV V+    +  C+     S    M T   ++ L   G  Y+IC +  HC
Sbjct: 35  LEFDFAAGMHDVAVVTKDAFDNCKKENPISH---MTTPPVKIMLNTTGPQYYICTVGDHC 91

Query: 309 DKNMKLAV 286
               KL++
Sbjct: 92  RVGQKLSI 99



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>NO16_MEDTR (P93328) Early nodulin 16 precursor (N-16)|
          Length = 180

 Score = 29.3 bits (64), Expect = 5.9
 Identities = 22/69 (31%), Positives = 32/69 (46%), Gaps = 2/69 (2%)
 Frame = -3

Query: 486 LVFKYXKELHDVTVLXGKGYRRCEVPRHSSKSWVMR-TGNDQVTLRR-GNNYFICGLPGH 313
           ++F+Y  E   V  +    Y  C    H++   V    GN +V L + G  +FI G   H
Sbjct: 61  ILFEYDNETESVHEVNEHDYIMC----HTNGEHVEHHDGNTKVVLDKIGVYHFISGTKRH 116

Query: 312 CDKNMKLAV 286
           C   +KLAV
Sbjct: 117 CKMGLKLAV 125



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>MCM1_YEAST (P11746) Pheromone receptor transcription factor (GRM/PRTF protein)|
          Length = 286

 Score = 29.3 bits (64), Expect = 5.9
 Identities = 20/62 (32%), Positives = 30/62 (48%)
 Frame = -2

Query: 451 DGAGRQGVPAVRGAEAQQQELGDAHRERPGHAAQGQQLLHLRPAGPLRQEHEARRQGLVD 272
           DG   Q     +    QQQ++ +AH    GH  Q Q      PAG L+QE +++  G  +
Sbjct: 117 DGNDMQRQQPQQQQPQQQQQVLNAHANSLGHLNQDQV-----PAGALKQEVKSQLLGGAN 171

Query: 271 PS 266
           P+
Sbjct: 172 PN 173



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>KTHY_BDEBA (Q6MP28) Thymidylate kinase (EC 2.7.4.9) (dTMP kinase)|
          Length = 214

 Score = 29.3 bits (64), Expect = 5.9
 Identities = 24/75 (32%), Positives = 33/75 (44%), Gaps = 8/75 (10%)
 Frame = -2

Query: 451 DGAGRQGVPAVRGAEAQQQELGDAHRERPGHAAQGQQL--LHLRPAGPL---RQE---HE 296
           DG+G+  + A    E Q + +       PG    G ++  + LR  GP    R E   +E
Sbjct: 14  DGSGKSSLMAALERELQNRAINFLRTREPGGTPLGDEIRNMILRKEGPAPTPRTELLLYE 73

Query: 295 ARRQGLVDPSIRPHL 251
           A R   VD  IRP L
Sbjct: 74  ASRSQHVDQVIRPAL 88



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>JHD1_DROME (Q9VHH9) JmjC domain-containing histone demethylation protein 1 (EC|
            1.14.11.-)
          Length = 1345

 Score = 28.9 bits (63), Expect = 7.7
 Identities = 22/113 (19%), Positives = 41/113 (36%), Gaps = 1/113 (0%)
 Frame = -2

Query: 481  VQVXQGAPRRDGAGRQGVPAVRGAEAQQQELGDAHRERPGHAAQGQQLLHLRPAGPLRQE 302
            V+   G      +G  G  +     +       A+    G+  +G     L  +  L  +
Sbjct: 996  VRPASGTGSSSSSGNGGSASATNGISNGSNQSGANSCGAGNGERGTNNGGLSGSNGLGNQ 1055

Query: 301  HEARRQGL-VDPSIRPHLMHVRRTSSSIDACSACFAWPSITVQALLGSRVNLS 146
            H +  Q L +DP++   +       + +  CS C  W +  V   L  ++N S
Sbjct: 1056 HYSSSQNLALDPTVLKIIFRYLPQDTLVTCCSVCKVWSNAAVDPDLWKKMNCS 1108



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>RHPN2_MOUSE (Q8BWR8) Rhophilin-2 (GTP-Rho-binding protein 2)|
          Length = 686

 Score = 28.9 bits (63), Expect = 7.7
 Identities = 18/45 (40%), Positives = 23/45 (51%)
 Frame = +1

Query: 274 LPGLDGELHVLVAVARQAADEVVVAPAQRDLVVPGAHHPALAAVP 408
           LPG+  E  VLV VA++AA    VA A R L    +  P    +P
Sbjct: 297 LPGIQNEFFVLVKVAQEAAK---VAEAYRQLHAAMSQEPVKENIP 338


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 59,503,573
Number of Sequences: 219361
Number of extensions: 1176158
Number of successful extensions: 3763
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 3624
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3756
length of database: 80,573,946
effective HSP length: 103
effective length of database: 57,979,763
effective search space used: 3420806017
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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