>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
               sequence
          Length = 30731886

 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 93/108 (86%)
 Strand = Plus / Plus

                                                                           
Query: 281     gccttgacggcgagcttcatgttcttgtcgcagtggcccggcaggccgcagatgaagtag 340
               |||||||||||||||||||||     ||||||||||||||||| ||||||||||||||||
Sbjct: 8847835 gccttgacggcgagcttcatgccggcgtcgcagtggcccggcatgccgcagatgaagtag 8847894

                                                               
Query: 341     ttgttgcccctgcgcagcgtgacctggtcgttcccggtgcgcatcacc 388
               ||||| || |  || ||||| |||||||||| |||||| |||| ||||
Sbjct: 8847895 ttgttccctcgccggagcgtcacctggtcgtacccggtccgcagcacc 8847942



 Score = 87.7 bits (44), Expect = 3e-14
 Identities = 69/78 (88%)
 Strand = Plus / Plus

                                                                           
Query: 406     cctcggcacctcgcaccgccggtaccccttgcctnccagcaccgtcacgtcgtggagctc 465
               ||||||||||| |||||||||||||||||||||  | | ||||| ||||||||||  |||
Sbjct: 8847957 cctcggcaccttgcaccgccggtaccccttgccgccgaccaccgccacgtcgtggtactc 8848016

                                 
Query: 466     cttgtngtacttgaacac 483
               ||||| ||||||||||||
Sbjct: 8848017 cttgttgtacttgaacac 8848034

>dbj|AP005382.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
              clone:OJ1001_B06
          Length = 134810

 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 93/108 (86%)
 Strand = Plus / Plus

                                                                          
Query: 281    gccttgacggcgagcttcatgttcttgtcgcagtggcccggcaggccgcagatgaagtag 340
              |||||||||||||||||||||     ||||||||||||||||| ||||||||||||||||
Sbjct: 118156 gccttgacggcgagcttcatgccggcgtcgcagtggcccggcatgccgcagatgaagtag 118215

                                                              
Query: 341    ttgttgcccctgcgcagcgtgacctggtcgttcccggtgcgcatcacc 388
              ||||| || |  || ||||| |||||||||| |||||| |||| ||||
Sbjct: 118216 ttgttccctcgccggagcgtcacctggtcgtacccggtccgcagcacc 118263



 Score = 87.7 bits (44), Expect = 3e-14
 Identities = 69/78 (88%)
 Strand = Plus / Plus

                                                                          
Query: 406    cctcggcacctcgcaccgccggtaccccttgcctnccagcaccgtcacgtcgtggagctc 465
              ||||||||||| |||||||||||||||||||||  | | ||||| ||||||||||  |||
Sbjct: 118278 cctcggcaccttgcaccgccggtaccccttgccgccgaccaccgccacgtcgtggtactc 118337

                                
Query: 466    cttgtngtacttgaacac 483
              ||||| ||||||||||||
Sbjct: 118338 cttgttgtacttgaacac 118355

>dbj|AP003575.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0528B02
          Length = 144495

 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 93/108 (86%)
 Strand = Plus / Plus

                                                                         
Query: 281   gccttgacggcgagcttcatgttcttgtcgcagtggcccggcaggccgcagatgaagtag 340
             |||||||||||||||||||||     ||||||||||||||||| ||||||||||||||||
Sbjct: 13464 gccttgacggcgagcttcatgccggcgtcgcagtggcccggcatgccgcagatgaagtag 13523

                                                             
Query: 341   ttgttgcccctgcgcagcgtgacctggtcgttcccggtgcgcatcacc 388
             ||||| || |  || ||||| |||||||||| |||||| |||| ||||
Sbjct: 13524 ttgttccctcgccggagcgtcacctggtcgtacccggtccgcagcacc 13571



 Score = 87.7 bits (44), Expect = 3e-14
 Identities = 69/78 (88%)
 Strand = Plus / Plus

                                                                         
Query: 406   cctcggcacctcgcaccgccggtaccccttgcctnccagcaccgtcacgtcgtggagctc 465
             ||||||||||| |||||||||||||||||||||  | | ||||| ||||||||||  |||
Sbjct: 13586 cctcggcaccttgcaccgccggtaccccttgccgccgaccaccgccacgtcgtggtactc 13645

                               
Query: 466   cttgtngtacttgaacac 483
             ||||| ||||||||||||
Sbjct: 13646 cttgttgtacttgaacac 13663

>ref|XM_480000.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 573

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 32/34 (94%)
 Strand = Plus / Minus

                                             
Query: 307 gtcgcagtggcccggcaggccgcagatgaagtag 340
           ||||||||| ||||||| ||||||||||||||||
Sbjct: 327 gtcgcagtgccccggcacgccgcagatgaagtag 294

>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
               sequence
          Length = 28434780

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 32/34 (94%)
 Strand = Plus / Minus

                                                 
Query: 307     gtcgcagtggcccggcaggccgcagatgaagtag 340
               ||||||||| ||||||| ||||||||||||||||
Sbjct: 2142202 gtcgcagtgccccggcacgccgcagatgaagtag 2142169

>dbj|AP003876.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OJ1119_D01
          Length = 97862

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 32/34 (94%)
 Strand = Plus / Minus

                                               
Query: 307   gtcgcagtggcccggcaggccgcagatgaagtag 340
             ||||||||| ||||||| ||||||||||||||||
Sbjct: 20464 gtcgcagtgccccggcacgccgcagatgaagtag 20431

>ref|XM_476370.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 588

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 31/33 (93%)
 Strand = Plus / Minus

                                            
Query: 309 cgcagtggcccggcaggccgcagatgaagtagt 341
           |||||||||| |||| |||||||||||||||||
Sbjct: 337 cgcagtggccgggcacgccgcagatgaagtagt 305

>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7,
              complete sequence
          Length = 29644043

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 31/33 (93%)
 Strand = Plus / Minus

                                               
Query: 309    cgcagtggcccggcaggccgcagatgaagtagt 341
              |||||||||| |||| |||||||||||||||||
Sbjct: 290542 cgcagtggccgggcacgccgcagatgaagtagt 290510



 Score = 42.1 bits (21), Expect = 1.7
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                                 
Query: 309      cgcagtggcccggcaggccgcagatgaagtagt 341
                ||||||||||||| | |||||||| ||||||||
Sbjct: 22943698 cgcagtggcccgggaagccgcagaggaagtagt 22943730

>dbj|AP005187.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
              clone:P0446F04
          Length = 175390

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 31/33 (93%)
 Strand = Plus / Minus

                                               
Query: 309    cgcagtggcccggcaggccgcagatgaagtagt 341
              |||||||||| |||| |||||||||||||||||
Sbjct: 125406 cgcagtggccgggcacgccgcagatgaagtagt 125374

>dbj|AP006186.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:B1317D11
          Length = 135043

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 31/33 (93%)
 Strand = Plus / Minus

                                              
Query: 309   cgcagtggcccggcaggccgcagatgaagtagt 341
             |||||||||| |||| |||||||||||||||||
Sbjct: 14780 cgcagtggccgggcacgccgcagatgaagtagt 14748

>dbj|AP004673.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0617C02
          Length = 135605

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 31/33 (93%)
 Strand = Plus / Minus

                                              
Query: 309   cgcagtggcccggcaggccgcagatgaagtagt 341
             |||||||||| |||| |||||||||||||||||
Sbjct: 42541 cgcagtggccgggcacgccgcagatgaagtagt 42509

>ref|XM_471828.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 6462

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                               
Query: 309  cgcagtggcccggcaggccgcagatgaagtagttg 343
            |||||||||| || | |||||||||||||||||||
Sbjct: 6403 cgcagtggccggggacgccgcagatgaagtagttg 6369

>gb|AC145327.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBb0095J10 map near S6115, complete sequence
          Length = 123717

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                                
Query: 309   cgcagtggcccggcaggccgcagatgaagtagttg 343
             |||||||||| || | |||||||||||||||||||
Sbjct: 53601 cgcagtggcctgggacgccgcagatgaagtagttg 53567

>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                                   
Query: 309      cgcagtggcccggcaggccgcagatgaagtagttg 343
                |||||||||| || | |||||||||||||||||||
Sbjct: 14790141 cgcagtggccggggacgccgcagatgaagtagttg 14790175

>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                                   
Query: 309      cgcagtggcccggcaggccgcagatgaagtagttg 343
                |||||||||| || | |||||||||||||||||||
Sbjct: 12981704 cgcagtggcctgggacgccgcagatgaagtagttg 12981670

>emb|AL663021.4|OSJN00218 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0041M06,
             complete sequence
          Length = 107014

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                                
Query: 309   cgcagtggcccggcaggccgcagatgaagtagttg 343
             |||||||||| || | |||||||||||||||||||
Sbjct: 44079 cgcagtggccggggacgccgcagatgaagtagttg 44113

>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                                   
Query: 309      cgcagtggcccggcaggccgcagatgaagtagttg 343
                |||||||||| || | |||||||||||||||||||
Sbjct: 13061883 cgcagtggcctgggacgccgcagatgaagtagttg 13061849

>ref|XM_469940.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 519

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 292 gagcttcatgttcttgtcgcagtgg 316
           |||||||||||||||| ||||||||
Sbjct: 363 gagcttcatgttcttggcgcagtgg 339

>gb|AC090871.11| Oryza sativa chromosome 3 BAC OSJNBb0060J21 genomic sequence, complete
              sequence
          Length = 162497

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 292    gagcttcatgttcttgtcgcagtgg 316
              |||||||||||||||| ||||||||
Sbjct: 140574 gagcttcatgttcttggcgcagtgg 140550

>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                         
Query: 292      gagcttcatgttcttgtcgcagtgg 316
                |||||||||||||||| ||||||||
Sbjct: 32603333 gagcttcatgttcttggcgcagtgg 32603357

>gb|AC006304.4| Arabidopsis thaliana chromosome 2 clone T1O16 map mi398, complete
            sequence
          Length = 89281

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 66   aagtttacactcaattaagaaacac 90
            ||||||||| |||||||||||||||
Sbjct: 9289 aagtttacattcaattaagaaacac 9265

>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                         
Query: 292      gagcttcatgttcttgtcgcagtgg 316
                |||||||||||||||| ||||||||
Sbjct: 32693843 gagcttcatgttcttggcgcagtgg 32693867

>dbj|AP005908.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OJ1121_A05
          Length = 172668

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                              
Query: 309   cgcagtggcccggcaggccgcagatgaagtagt 341
             ||||||||||||| | |||||||| ||||||||
Sbjct: 18912 cgcagtggcccgggaagccgcagaggaagtagt 18944

>gb|AY342393.1| Zea diploperennis polyubiquitin-1 (Ubi-1) gene, promoter region and
           5' UTR
          Length = 2182

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 352 gcgcagcgtgacctggtcgt 371
           ||||||||||||||||||||
Sbjct: 36  gcgcagcgtgacctggtcgt 55

>ref|XM_453149.1| Kluyveromyces lactis NRRL Y-1140, KLLA0D01837g predicted mRNA
          Length = 771

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 297 tcatgttcttgtcgcagtgg 316
           ||||||||||||||||||||
Sbjct: 533 tcatgttcttgtcgcagtgg 514

>gb|AC125381.4| Mus musculus BAC clone RP23-250N10 from chromosome 19, complete
             sequence
          Length = 155214

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 47    ataacatcgagaaaacatca 66
             ||||||||||||||||||||
Sbjct: 33003 ataacatcgagaaaacatca 32984

>gb|AC117183.3| Mus musculus BAC clone RP23-37B19 from 19, complete sequence
          Length = 190192

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 47     ataacatcgagaaaacatca 66
              ||||||||||||||||||||
Sbjct: 186698 ataacatcgagaaaacatca 186679

>gb|DQ437887.1| Sus scrofa peroxisome proliferator-activated receptor alpha mRNA,
           complete cds
          Length = 1488

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 354 gcagcgtgacctggtcgttc 373
           ||||||||||||||||||||
Sbjct: 966 gcagcgtgacctggtcgttc 947

>emb|CR382124.1| Kluyveromyces lactis strain NRRL Y-1140 chromosome D of strain NRRL
              Y-1140 of Kluyveromyces lactis
          Length = 1715506

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 297    tcatgttcttgtcgcagtgg 316
              ||||||||||||||||||||
Sbjct: 160474 tcatgttcttgtcgcagtgg 160493

>gb|CP000142.2| Pelobacter carbinolicus DSM 2380, complete genome
          Length = 3665893

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 408    tcggcacctcgcaccgccggtacc 431
              |||||||||||||| |||||||||
Sbjct: 291661 tcggcacctcgcactgccggtacc 291684

>dbj|BA000038.2| Vibrio vulnificus YJ016 DNA, chromosome II, complete sequence
          Length = 1857073

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 49      aacatcgagaaaacatcaag 68
               ||||||||||||||||||||
Sbjct: 1671234 aacatcgagaaaacatcaag 1671253

>gb|AF228696.1|AF228696 Sus scrofa peroxisome proliferator activated receptor alpha
           (PPARalpha) mRNA, partial cds
          Length = 1404

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 354 gcagcgtgacctggtcgttc 373
           ||||||||||||||||||||
Sbjct: 925 gcagcgtgacctggtcgttc 906

>dbj|AP000419.1| Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone: MVI11
          Length = 81875

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 50    acatcgagaaaacatcaagt 69
             ||||||||||||||||||||
Sbjct: 22557 acatcgagaaaacatcaagt 22576

>dbj|AK119311.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-130-G08, full
            insert sequence
          Length = 3224

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 288  cggcgagcttcatgttcttg 307
            ||||||||||||||||||||
Sbjct: 1487 cggcgagcttcatgttcttg 1468

>dbj|AK109969.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-159-C04, full
            insert sequence
          Length = 3464

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 288  cggcgagcttcatgttcttg 307
            ||||||||||||||||||||
Sbjct: 2069 cggcgagcttcatgttcttg 2050

>gb|AY106946.1| Zea mays PCO103853 mRNA sequence
          Length = 664

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 56/68 (82%)
 Strand = Plus / Minus

                                                                       
Query: 310 gcagtggcccggcaggccgcagatgaagtagttgttgcccctgcgcagcgtgacctggtc 369
           ||||||||| || | || |||||||||||||||| |||| | |  |||||||||  ||||
Sbjct: 456 gcagtggccggggatgctgcagatgaagtagttggtgccgcgggccagcgtgacgcggtc 397

                   
Query: 370 gttcccgg 377
           ||| ||||
Sbjct: 396 gttgccgg 389

>gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, complete sequence
          Length = 3809201

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 291     cgagcttcatgttcttgtcg 310
               ||||||||||||||||||||
Sbjct: 3283215 cgagcttcatgttcttgtcg 3283196

>gb|AE016796.1| Vibrio vulnificus CMCP6 chromosome II, complete sequence
          Length = 1844853

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 49      aacatcgagaaaacatcaag 68
               ||||||||||||||||||||
Sbjct: 1109018 aacatcgagaaaacatcaag 1109037



 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 386    acccagctcttgctgctgtg 405
              ||||||||||||||||||||
Sbjct: 327924 acccagctcttgctgctgtg 327905


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,920,493
Number of Sequences: 3902068
Number of extensions: 2920493
Number of successful extensions: 54762
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 39
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 54496
Number of HSP's gapped (non-prelim): 263
length of query: 488
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 466
effective length of database: 17,147,199,772
effective search space: 7990595093752
effective search space used: 7990595093752
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)