ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags26k21
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_473920.1| Oryza sativa (japonica cultivar-group), predic... 151 3e-33
2dbj|AK060209.1| Oryza sativa (japonica cultivar-group) cDNA clon... 151 3e-33
3emb|AL662970.2|OSJN00174 Oryza sativa genomic DNA, chromosome 4,... 92 2e-15
4dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 92 2e-15
5gb|AY112075.1| Zea mays CL52019_1 mRNA sequence 76 1e-10
6gb|AC122630.5| Rattus norvegicus 4 BAC CH230-131B2 (Children's H... 46 0.12
7gb|AC122389.2| Mus musculus BAC clone RP24-80N23 from 16, comple... 46 0.12
8ref|NM_029337.1| Mus musculus E1A binding protein p400 (Ep400), ... 44 0.47
9emb|AL109920.15|HSDJ335E1 Human DNA sequence from clone RP3-335E... 44 0.47
10gb|AC161348.2| Mus musculus chromosome 5, clone RP23-393E10, com... 44 0.47
11dbj|AK046892.1| Mus musculus 10 days neonate cerebellum cDNA, RI... 44 0.47
12ref|XM_222251.3| PREDICTED: Rattus norvegicus E1A binding protei... 44 0.47
13dbj|AB092695.1| Mus musculus mRNA for mDomino-S, complete cds 44 0.47
14dbj|AB092694.1| Mus musculus mRNA for mDomino, complete cds 44 0.47
15gb|AC161287.2| Pan troglodytes BAC clone CH251-267A11 from chrom... 42 1.8
16gb|AC002456.2| Homo sapiens BAC clone CTB-13L3 from 7, complete ... 42 1.8
17emb|AL355488.41| Human DNA sequence from clone RP5-1074L1 on chr... 42 1.8
18gb|AE017285.1| Desulfovibrio vulgaris subsp. vulgaris str. Hilde... 42 1.8
19ref|XM_240178.3| PREDICTED: Rattus norvegicus apoptotic chromati... 42 1.8
20ref|XM_633166.1| Dictyostelium discoideum hypothetical protein (... 40 7.3
21ref|XM_473024.1| Oryza sativa (japonica cultivar-group), predic... 40 7.3
22gb|AC125252.7| Mus musculus chromosome 5, clone RP23-388M10, com... 40 7.3
23ref|XM_368284.1| Magnaporthe grisea 70-15 chromosome VI hypothet... 40 7.3
24gb|AC111058.10| Mus musculus chromosome 7, clone RP24-562C11, co... 40 7.3
25gb|BC075691.1| Mus musculus apoptotic chromatin condensation ind... 40 7.3
26ref|XM_652755.1| Aspergillus nidulans FGSC A4 hypothetical prote... 40 7.3
27gb|AC116591.4| Mus musculus BAC clone RP24-90K1 from chromosome ... 40 7.3
28gb|AF397025.1| Gluconacetobacter diazotrophicus uridylyltransfer... 40 7.3
29ref|XM_726303.1| Plasmodium yoelii yoelii str. 17XNL DNA topoiso... 40 7.3
30ref|XM_668797.1| Plasmodium berghei strain ANKA hypothetical pro... 40 7.3
31ref|XM_670733.1| Plasmodium berghei strain ANKA hypothetical pro... 40 7.3
32gb|AC158113.7| Mus musculus chromosome 7, clone RP23-227N6, comp... 40 7.3
33gb|AE017160.1| Chlamydophila pneumoniae TW-183, section 4 of 4 o... 40 7.3
34gb|BC032046.1| Mus musculus, clone IMAGE:4193217, mRNA 40 7.3
35gb|BC100244.1| Xenopus laevis cDNA clone MGC:115611 IMAGE:374634... 40 7.3
36emb|BX548156.1|OSJN00292 Oryza sativa genomic DNA, chromosome 4,... 40 7.3
37gb|AC104186.2| Homo sapiens chromosome 3 clone RP11-391M1, compl... 40 7.3
38gb|AC010045.5| Drosophila melanogaster 3L BAC RP98-17C17 (Roswel... 40 7.3
39gb|AC010059.6| Drosophila melanogaster 3L BAC RP98-17A14 (Roswel... 40 7.3
40ref|NM_023190.1| Mus musculus apoptotic chromatin condensation i... 40 7.3
41gb|AC026427.4| Homo sapiens chromosome 5 clone CTD-2193P3, compl... 40 7.3
42gb|AE002161.1| Chlamydophila pneumoniae AR39, complete genome 40 7.3
43dbj|AK050467.1| Mus musculus adult pancreas islet cells cDNA, RI... 40 7.3
44dbj|AK042128.1| Mus musculus 3 days neonate thymus cDNA, RIKEN f... 40 7.3
45dbj|AK030449.1| Mus musculus adult male pituitary gland cDNA, RI... 40 7.3
46dbj|AK011698.1| Mus musculus 10 days embryo whole body cDNA, RIK... 40 7.3
47gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome 40 7.3
48gb|AF168782.1|AF168782 Mus musculus acinusL protein mRNA, comple... 40 7.3
49gb|AE001363.1| Chlamydophila pneumoniae CWL029, complete genome 40 7.3
50gb|AC009317.4|AC009317 Genomic sequence for Arabidopsis thaliana... 40 7.3
51dbj|BA000008.3| Chlamydophila pneumoniae J138 genomic DNA, compl... 40 7.3
52dbj|AK191221.1| Mus musculus cDNA, clone:Y1G0105D14, strand:unsp... 40 7.3
53gb|AC008518.3|AC008518 Homo sapiens chromosome 5 clone CTC-459I6... 40 7.3
54gb|AC147873.3| Monodelphis domestica clone VMRC6-582D4, complete... 40 7.3
55emb|AJ331044.1|HSA331044 Homo sapiens genomic sequence surroundi... 40 7.3
56gb|AE003522.3| Drosophila melanogaster chromosome 3L, section 63... 40 7.3
57dbj|AK122342.1| Mus musculus mRNA for mKIAA0670 protein 40 7.3
58emb|AL606629.3|OSJN00061 Oryza sativa genomic DNA, chromosome 4,... 40 7.3
59emb|AL606627.3|OSJN00052 Oryza sativa genomic DNA, chromosome 4,... 40 7.3
60emb|CT009512.6| Mouse DNA sequence from clone RP23-94B13 on chro... 40 7.3
61gb|DP000021.1| Monodelphis domestica target 1 genomic scaffold 40 7.3
62emb|AL831742.6| Mouse DNA sequence from clone RP23-11F9 on chrom... 40 7.3 
>ref|XM_473920.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1596

 Score =  151 bits (76), Expect = 3e-33
 Identities = 211/256 (82%)
 Strand = Plus / Minus

                                                                        
Query: 282  cagcataggatacgtgaccctggaatccgtcctgtctggcggatcagatcggccttctga 341
            ||||||||||||| |||||||||||  |||||||||||||| ||||| || ||||| |||
Sbjct: 1571 cagcataggatacatgaccctggaactcgtcctgtctggcgaatcagctcagccttgtga 1512

                                                                        
Query: 342  actgcccttgctgcttgcttgttcatcttggcgttggctgatgcccgcttctcctccgcc 401
            || ||| |||||||||| | ||||||| | || |||||||| || || ||||| || || 
Sbjct: 1511 accgcctttgctgcttgttggttcatccttgcattggctgaggctcgtttctcttcagct 1452

                                                                        
Query: 402  acgcggcgtgccagctcgagcctttccgccatccttgccatggcctcgcttctcattttc 461
            |  || |||| ||  || ||| |||| |||||| | |||||||| ||||||| || ||||
Sbjct: 1451 aaacgccgtgtcatttctagcttttcagccatcttcgccatggcttcgcttcgcaatttc 1392

                                                                        
Query: 462  tccgcgcgttcctctagtctcttcatttcagattcaacttttgttctttggcggctctcc 521
            || ||  ||||||||| |||||||||||||||||| | ||||| | ||||  ||||||||
Sbjct: 1391 tctgcatgttcctctattctcttcatttcagattctatttttgctttttgaaggctctcc 1332

                            
Query: 522  catgcttcgatcttca 537
            |||||||| |||||||
Sbjct: 1331 catgcttcaatcttca 1316
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>dbj|AK060209.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-002-B03, full
           insert sequence
          Length = 1109

 Score =  151 bits (76), Expect = 3e-33
 Identities = 211/256 (82%)
 Strand = Plus / Minus

                                                                       
Query: 282 cagcataggatacgtgaccctggaatccgtcctgtctggcggatcagatcggccttctga 341
           ||||||||||||| |||||||||||  |||||||||||||| ||||| || ||||| |||
Sbjct: 831 cagcataggatacatgaccctggaactcgtcctgtctggcgaatcagctcagccttgtga 772

                                                                       
Query: 342 actgcccttgctgcttgcttgttcatcttggcgttggctgatgcccgcttctcctccgcc 401
           || ||| |||||||||| | ||||||| | || |||||||| || || ||||| || || 
Sbjct: 771 accgcctttgctgcttgttggttcatccttgcattggctgaggctcgtttctcttcagct 712

                                                                       
Query: 402 acgcggcgtgccagctcgagcctttccgccatccttgccatggcctcgcttctcattttc 461
           |  || |||| ||  || ||| |||| |||||| | |||||||| ||||||| || ||||
Sbjct: 711 aaacgccgtgtcatttctagcttttcagccatcttcgccatggcttcgcttcgcaatttc 652

                                                                       
Query: 462 tccgcgcgttcctctagtctcttcatttcagattcaacttttgttctttggcggctctcc 521
           || ||  ||||||||| |||||||||||||||||| | ||||| | ||||  ||||||||
Sbjct: 651 tctgcatgttcctctattctcttcatttcagattctatttttgctttttgaaggctctcc 592

                           
Query: 522 catgcttcgatcttca 537
           |||||||| |||||||
Sbjct: 591 catgcttcaatcttca 576
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>emb|AL662970.2|OSJN00174 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0058K23,
              complete sequence
          Length = 164805

 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 148/182 (81%)
 Strand = Plus / Minus

                                                                          
Query: 282    cagcataggatacgtgaccctggaatccgtcctgtctggcggatcagatcggccttctga 341
              ||||||||||||| |||||||||||  |||||||||||||| ||||| || ||||| |||
Sbjct: 139192 cagcataggatacatgaccctggaactcgtcctgtctggcgaatcagctcagccttgtga 139133

                                                                          
Query: 342    actgcccttgctgcttgcttgttcatcttggcgttggctgatgcccgcttctcctccgcc 401
              || ||| |||||||||| | ||||||| | || |||||||| || || ||||| || || 
Sbjct: 139132 accgcctttgctgcttgttggttcatccttgcattggctgaggctcgtttctcttcagct 139073

                                                                          
Query: 402    acgcggcgtgccagctcgagcctttccgccatccttgccatggcctcgcttctcattttc 461
              |  || |||| ||  || ||| |||| |||||| | |||||||| ||||||| || ||||
Sbjct: 139072 aaacgccgtgtcatttctagcttttcagccatcttcgccatggcttcgcttcgcaatttc 139013

                
Query: 462    tc 463
              ||
Sbjct: 139012 tc 139011



 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 58/66 (87%)
 Strand = Plus / Minus

                                                                          
Query: 472    cctctagtctcttcatttcagattcaacttttgttctttggcggctctcccatgcttcga 531
              |||||| |||||||||||||||||| | ||||| | ||||  |||||||||||||||| |
Sbjct: 138855 cctctattctcttcatttcagattctatttttgctttttgaaggctctcccatgcttcaa 138796

                    
Query: 532    tcttca 537
              ||||||
Sbjct: 138795 tcttca 138790
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 148/182 (81%)
 Strand = Plus / Minus

                                                                            
Query: 282      cagcataggatacgtgaccctggaatccgtcctgtctggcggatcagatcggccttctga 341
                ||||||||||||| |||||||||||  |||||||||||||| ||||| || ||||| |||
Sbjct: 31561509 cagcataggatacatgaccctggaactcgtcctgtctggcgaatcagctcagccttgtga 31561450

                                                                            
Query: 342      actgcccttgctgcttgcttgttcatcttggcgttggctgatgcccgcttctcctccgcc 401
                || ||| |||||||||| | ||||||| | || |||||||| || || ||||| || || 
Sbjct: 31561449 accgcctttgctgcttgttggttcatccttgcattggctgaggctcgtttctcttcagct 31561390

                                                                            
Query: 402      acgcggcgtgccagctcgagcctttccgccatccttgccatggcctcgcttctcattttc 461
                |  || |||| ||  || ||| |||| |||||| | |||||||| ||||||| || ||||
Sbjct: 31561389 aaacgccgtgtcatttctagcttttcagccatcttcgccatggcttcgcttcgcaatttc 31561330

                  
Query: 462      tc 463
                ||
Sbjct: 31561329 tc 31561328



 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 58/66 (87%)
 Strand = Plus / Minus

                                                                            
Query: 472      cctctagtctcttcatttcagattcaacttttgttctttggcggctctcccatgcttcga 531
                |||||| |||||||||||||||||| | ||||| | ||||  |||||||||||||||| |
Sbjct: 31561172 cctctattctcttcatttcagattctatttttgctttttgaaggctctcccatgcttcaa 31561113

                      
Query: 532      tcttca 537
                ||||||
Sbjct: 31561112 tcttca 31561107



 Score = 40.1 bits (20), Expect = 7.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 428      cgccatccttgccatggcctcgct 451
                ||||||||| ||||||||||||||
Sbjct: 24743160 cgccatcctggccatggcctcgct 24743183



 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 350      tgctgcttgcttgttcatct 369
                ||||||||||||||||||||
Sbjct: 22035378 tgctgcttgcttgttcatct 22035359
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>gb|AY112075.1| Zea mays CL52019_1 mRNA sequence
          Length = 618

 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 110/134 (82%)
 Strand = Plus / Plus

                                                                       
Query: 330 tcggccttctgaactgcccttgctgcttgcttgttcatcttggcgttggctgatgcccgc 389
           |||||||||||||| ||  | |||||||||| |||||| ||||||||||| || || || 
Sbjct: 321 tcggccttctgaaccgctatagctgcttgctggttcattttggcgttggccgaagctcgt 380

                                                                       
Query: 390 ttctcctccgccacgcggcgtgccagctcgagcctttccgccatccttgccatggcctcg 449
           ||||| || || | |||||| | || ||| ||| |||| |||||| || |||||||||| 
Sbjct: 381 ttctcttcggctatgcggcgcgtcatctctagcttttcggccatcttttccatggcctca 440

                         
Query: 450 cttctcattttctc 463
           ||||||||| ||||
Sbjct: 441 cttctcattctctc 454
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>gb|AC122630.5| Rattus norvegicus 4 BAC CH230-131B2 (Children's Hospital Oakland
             Research Institute Rat (BN/SsNHsd/MCW) BAC library)
             complete sequence
          Length = 211343

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 484   tcatttcagattcaacttttgtt 506
             |||||||||||||||||||||||
Sbjct: 32621 tcatttcagattcaacttttgtt 32643
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>gb|AC122389.2| Mus musculus BAC clone RP24-80N23 from 16, complete sequence
          Length = 217046

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 486   atttcagattcaacttttgttct 508
             |||||||||||||||||||||||
Sbjct: 88020 atttcagattcaacttttgttct 88042
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>ref|NM_029337.1| Mus musculus E1A binding protein p400 (Ep400), mRNA
          Length = 10623

 Score = 44.1 bits (22), Expect = 0.47
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                      
Query: 27   tagcccctgaagaacagcttatagga 52
            ||||||||||||||| ||||||||||
Sbjct: 3571 tagcccctgaagaactgcttatagga 3546
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>emb|AL109920.15|HSDJ335E1 Human DNA sequence from clone RP3-335E1 on chromosome 6q16.2-21 Contains
              a CpG island, complete sequence
          Length = 143805

 Score = 44.1 bits (22), Expect = 0.47
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 56     tttttcttcagaaaaagaacaa 77
              ||||||||||||||||||||||
Sbjct: 137601 tttttcttcagaaaaagaacaa 137580
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>gb|AC161348.2| Mus musculus chromosome 5, clone RP23-393E10, complete sequence
          Length = 221768

 Score = 44.1 bits (22), Expect = 0.47
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                        
Query: 27     tagcccctgaagaacagcttatagga 52
              ||||||||||||||| ||||||||||
Sbjct: 133444 tagcccctgaagaactgcttatagga 133469
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>dbj|AK046892.1| Mus musculus 10 days neonate cerebellum cDNA, RIKEN full-length
           enriched library, clone:B930001F16 product:hypothetical
           SNF2 related domain/Helicase C-terminal domain/Myb DNA
           binding domain/DEAD/DEAH box helicase containing
           protein, full insert sequence
          Length = 4104

 Score = 44.1 bits (22), Expect = 0.47
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 27  tagcccctgaagaacagcttatagga 52
           ||||||||||||||| ||||||||||
Sbjct: 639 tagcccctgaagaactgcttatagga 614
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>ref|XM_222251.3| PREDICTED: Rattus norvegicus E1A binding protein p400 (predicted)
            (Ep400_predicted), mRNA
          Length = 11061

 Score = 44.1 bits (22), Expect = 0.47
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                      
Query: 27   tagcccctgaagaacagcttatagga 52
            ||||||||||||||| ||||||||||
Sbjct: 4139 tagcccctgaagaactgcttatagga 4114
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>dbj|AB092695.1| Mus musculus mRNA for mDomino-S, complete cds
          Length = 10515

 Score = 44.1 bits (22), Expect = 0.47
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                      
Query: 27   tagcccctgaagaacagcttatagga 52
            ||||||||||||||| ||||||||||
Sbjct: 3463 tagcccctgaagaactgcttatagga 3438
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>dbj|AB092694.1| Mus musculus mRNA for mDomino, complete cds
          Length = 10623

 Score = 44.1 bits (22), Expect = 0.47
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                      
Query: 27   tagcccctgaagaacagcttatagga 52
            ||||||||||||||| ||||||||||
Sbjct: 3571 tagcccctgaagaactgcttatagga 3546
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>gb|AC161287.2| Pan troglodytes BAC clone CH251-267A11 from chromosome 7, complete
              sequence
          Length = 166684

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 94     acactaagcaaattatttatatgac 118
              ||||||||||||||||||| |||||
Sbjct: 142586 acactaagcaaattatttaaatgac 142610
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>gb|AC002456.2| Homo sapiens BAC clone CTB-13L3 from 7, complete sequence
          Length = 156399

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 94    acactaagcaaattatttatatgac 118
             ||||||||||||||||||| |||||
Sbjct: 54455 acactaagcaaattatttaaatgac 54479
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>emb|AL355488.41| Human DNA sequence from clone RP5-1074L1 on chromosome 1 Contains the
             5' end of a novel transcript, the RBM15 gene for RNA
             binding motif protein 15, the SLC16A4 gene for a solute
             carrier,  family 16 (monocarboxylic acid transporters)
             member 4 and a CpG island, complete sequence
          Length = 81137

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 54    cctttttcttcagaaaaagaa 74
             |||||||||||||||||||||
Sbjct: 12737 cctttttcttcagaaaaagaa 12717
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>gb|AE017285.1| Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough, complete genome
          Length = 3570858

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 396     tccgccacgcggcgtgccagc 416
               |||||||||||||||||||||
Sbjct: 1133317 tccgccacgcggcgtgccagc 1133337
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>ref|XM_240178.3| PREDICTED: Rattus norvegicus apoptotic chromatin condensation
           inducer 1 (predicted) (Acin1_predicted), mRNA
          Length = 4733

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 53  acctttttcttcagaaaaaga 73
           |||||||||||||||||||||
Sbjct: 793 acctttttcttcagaaaaaga 773
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>ref|XM_633166.1| Dictyostelium discoideum hypothetical protein (DDB0218706), partial
            mRNA
          Length = 1437

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 481  tcttcatttcagattcaacttttg 504
            |||| |||||||||||||||||||
Sbjct: 1370 tctttatttcagattcaacttttg 1393
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>ref|XM_473024.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1146

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 428 cgccatccttgccatggcctcgct 451
           ||||||||| ||||||||||||||
Sbjct: 882 cgccatcctggccatggcctcgct 905
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>gb|AC125252.7| Mus musculus chromosome 5, clone RP23-388M10, complete sequence
          Length = 212724

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 174    aaaaaaccaaggaatgctga 193
              ||||||||||||||||||||
Sbjct: 123696 aaaaaaccaaggaatgctga 123715
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>ref|XM_368284.1| Magnaporthe grisea 70-15 chromosome VI hypothetical protein
            (MG00960.4) partial mRNA
          Length = 4941

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 358  gcttgttcatcttggcgttg 377
            ||||||||||||||||||||
Sbjct: 1702 gcttgttcatcttggcgttg 1683
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>gb|AC111058.10| Mus musculus chromosome 7, clone RP24-562C11, complete sequence
          Length = 211691

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 267    tcacagaaacagccacagca 286
              ||||||||||||||||||||
Sbjct: 172424 tcacagaaacagccacagca 172405
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>gb|BC075691.1| Mus musculus apoptotic chromatin condensation inducer 1, mRNA (cDNA
           clone IMAGE:30611061), partial cds
          Length = 3404

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 54  cctttttcttcagaaaaaga 73
           ||||||||||||||||||||
Sbjct: 477 cctttttcttcagaaaaaga 458
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>ref|XM_652755.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN0243.2), mRNA
          Length = 1335

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 63   tcagaaaaagaacaagaact 82
            ||||||||||||||||||||
Sbjct: 1207 tcagaaaaagaacaagaact 1226
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>gb|AC116591.4| Mus musculus BAC clone RP24-90K1 from chromosome 14, complete sequence
          Length = 237561

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 54     cctttttcttcagaaaaaga 73
              ||||||||||||||||||||
Sbjct: 235974 cctttttcttcagaaaaaga 235955
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>gb|AF397025.1| Gluconacetobacter diazotrophicus uridylyltransferase (glnD) gene,
            complete cds; and MutS (mutS) gene, partial cds
          Length = 4925

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 55   ctttttcttcagaaaaagaa 74
            ||||||||||||||||||||
Sbjct: 1150 ctttttcttcagaaaaagaa 1169
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>ref|XM_726303.1| Plasmodium yoelii yoelii str. 17XNL DNA topoisomerase II (PY03394)
            partial mRNA
          Length = 4470

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 65   agaaaaagaacaagaacttg 84
            ||||||||||||||||||||
Sbjct: 3522 agaaaaagaacaagaacttg 3541
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>ref|XM_668797.1| Plasmodium berghei strain ANKA hypothetical protein (PB300632.00.0)
           partial mRNA
          Length = 1116

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 65  agaaaaagaacaagaacttg 84
           ||||||||||||||||||||
Sbjct: 246 agaaaaagaacaagaacttg 265
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>ref|XM_670733.1| Plasmodium berghei strain ANKA hypothetical protein (PB000328.00.0)
           partial mRNA
          Length = 1173

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 58  tttcttcagaaaaagaacaa 77
           ||||||||||||||||||||
Sbjct: 434 tttcttcagaaaaagaacaa 453
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>gb|AC158113.7| Mus musculus chromosome 7, clone RP23-227N6, complete sequence
          Length = 159400

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 267   tcacagaaacagccacagca 286
             ||||||||||||||||||||
Sbjct: 81095 tcacagaaacagccacagca 81114
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>gb|AE017160.1| Chlamydophila pneumoniae TW-183, section 4 of 4 of the complete genome
          Length = 324746

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 34    tgaagaacagcttataggaacctt 57
             ||||||||||||||||| ||||||
Sbjct: 76606 tgaagaacagcttatagaaacctt 76583
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>gb|BC032046.1| Mus musculus, clone IMAGE:4193217, mRNA
          Length = 1762

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 386  ccgcttctcctccgccacgcggcg 409
            ||||||||||||| ||||||||||
Sbjct: 1561 ccgcttctcctcctccacgcggcg 1538
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>gb|BC100244.1| Xenopus laevis cDNA clone MGC:115611 IMAGE:3746340, complete cds
          Length = 3857

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 57  ttttcttcagaaaaagaaca 76
           ||||||||||||||||||||
Sbjct: 747 ttttcttcagaaaaagaaca 728
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>emb|BX548156.1|OSJN00292 Oryza sativa genomic DNA, chromosome 4, BAC clone: P0076O17, complete
              sequence
          Length = 121130

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 350    tgctgcttgcttgttcatct 369
              ||||||||||||||||||||
Sbjct: 101300 tgctgcttgcttgttcatct 101281
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>gb|AC104186.2| Homo sapiens chromosome 3 clone RP11-391M1, complete sequence
          Length = 186317

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 52    aacctttttcttcagaaaaa 71
             ||||||||||||||||||||
Sbjct: 57267 aacctttttcttcagaaaaa 57248
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>gb|AC010045.5| Drosophila melanogaster 3L BAC RP98-17C17 (Roswell Park Cancer
             Institute Drosophila BAC Library) complete sequence
          Length = 179649

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 62    ttcagaaaaagaacaagaac 81
             ||||||||||||||||||||
Sbjct: 31850 ttcagaaaaagaacaagaac 31869
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>gb|AC010059.6| Drosophila melanogaster 3L BAC RP98-17A14 (Roswell Park Cancer Institute
              Drosophila BAC Library) complete sequence
          Length = 171678

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 62     ttcagaaaaagaacaagaac 81
              ||||||||||||||||||||
Sbjct: 150127 ttcagaaaaagaacaagaac 150146
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>ref|NM_023190.1| Mus musculus apoptotic chromatin condensation inducer 1 (Acin1),
           transcript variant 2, mRNA
          Length = 4749

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 54  cctttttcttcagaaaaaga 73
           ||||||||||||||||||||
Sbjct: 793 cctttttcttcagaaaaaga 774
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>gb|AC026427.4| Homo sapiens chromosome 5 clone CTD-2193P3, complete sequence
          Length = 175838

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 151    ccagacattccctttcgcatactaaaaa 178
              ||||||||| |||||| |||||||||||
Sbjct: 151098 ccagacatttcctttctcatactaaaaa 151071
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>gb|AE002161.1| Chlamydophila pneumoniae AR39, complete genome
          Length = 1229853

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 34      tgaagaacagcttataggaacctt 57
               ||||||||||||||||| ||||||
Sbjct: 1090970 tgaagaacagcttatagaaacctt 1090993
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>dbj|AK050467.1| Mus musculus adult pancreas islet cells cDNA, RIKEN full-length
           enriched library, clone:C820001I03 product:apoptotic
           chromatin condensation inducer in the nucleus, full
           insert sequence
          Length = 2133

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 54  cctttttcttcagaaaaaga 73
           ||||||||||||||||||||
Sbjct: 355 cctttttcttcagaaaaaga 336
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>dbj|AK042128.1| Mus musculus 3 days neonate thymus cDNA, RIKEN full-length enriched
            library, clone:A630061D19 product:EDAR-ASSOCIATED DEATH
            DOMAIN PROTEIN homolog [Mus musculus], full insert
            sequence
          Length = 1564

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 54   cctttttcttcagaaaaaga 73
            ||||||||||||||||||||
Sbjct: 1504 cctttttcttcagaaaaaga 1485
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>dbj|AK030449.1| Mus musculus adult male pituitary gland cDNA, RIKEN full-length
           enriched library, clone:5330413K22 product:apoptotic
           chromatin condensation inducer in the nucleus, full
           insert sequence
          Length = 3431

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 54  cctttttcttcagaaaaaga 73
           ||||||||||||||||||||
Sbjct: 485 cctttttcttcagaaaaaga 466
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>dbj|AK011698.1| Mus musculus 10 days embryo whole body cDNA, RIKEN full-length
           enriched library, clone:2610036I19 product:apoptotic
           chromatin condensation inducer in the nucleus, full
           insert sequence
          Length = 963

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 54  cctttttcttcagaaaaaga 73
           ||||||||||||||||||||
Sbjct: 754 cctttttcttcagaaaaaga 735
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>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 393    tcctccgccacgcggcgtgccagc 416
              ||||||||||||||||| ||||||
Sbjct: 843044 tcctccgccacgcggcgggccagc 843067
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>gb|AF168782.1|AF168782 Mus musculus acinusL protein mRNA, complete cds
          Length = 4749

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 54  cctttttcttcagaaaaaga 73
           ||||||||||||||||||||
Sbjct: 793 cctttttcttcagaaaaaga 774
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>gb|AE001363.1| Chlamydophila pneumoniae CWL029, complete genome
          Length = 1230230

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 34     tgaagaacagcttataggaacctt 57
              ||||||||||||||||| ||||||
Sbjct: 980472 tgaagaacagcttatagaaacctt 980449
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>gb|AC009317.4|AC009317 Genomic sequence for Arabidopsis thaliana BAC T30E16 from chromosome I,
             complete sequence
          Length = 100008

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 491   agattcaacttttgttcttt 510
             ||||||||||||||||||||
Sbjct: 33371 agattcaacttttgttcttt 33390
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>dbj|BA000008.3| Chlamydophila pneumoniae J138 genomic DNA, complete sequence
          Length = 1226565

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 34     tgaagaacagcttataggaacctt 57
              ||||||||||||||||| ||||||
Sbjct: 979793 tgaagaacagcttatagaaacctt 979770
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>dbj|AK191221.1| Mus musculus cDNA, clone:Y1G0105D14, strand:unspecified
          Length = 322

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 51  gaacctttttcttcagaaaaagaa 74
           ||||||||||||||| ||||||||
Sbjct: 139 gaacctttttcttcaaaaaaagaa 162
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>gb|AC008518.3|AC008518 Homo sapiens chromosome 5 clone CTC-459I6, complete sequence
          Length = 172551

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 151   ccagacattccctttcgcatactaaaaa 178
             ||||||||| |||||| |||||||||||
Sbjct: 69808 ccagacatttcctttctcatactaaaaa 69781
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>gb|AC147873.3| Monodelphis domestica clone VMRC6-582D4, complete sequence
          Length = 165359

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 477   agtctcttcatttcagattc 496
             ||||||||||||||||||||
Sbjct: 72616 agtctcttcatttcagattc 72635
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>emb|AJ331044.1|HSA331044 Homo sapiens genomic sequence surrounding NotI site, clone
           NR5-GI15RS
          Length = 681

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 98  taagcaaattatttatatga 117
           ||||||||||||||||||||
Sbjct: 640 taagcaaattatttatatga 621
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>gb|AE003522.3| Drosophila melanogaster chromosome 3L, section 63 of 83 of the complete
              sequence
          Length = 302050

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 62     ttcagaaaaagaacaagaac 81
              ||||||||||||||||||||
Sbjct: 172608 ttcagaaaaagaacaagaac 172589
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>dbj|AK122342.1| Mus musculus mRNA for mKIAA0670 protein
          Length = 4370

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 54  cctttttcttcagaaaaaga 73
           ||||||||||||||||||||
Sbjct: 463 cctttttcttcagaaaaaga 444
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>emb|AL606629.3|OSJN00061 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0091E11,
              complete sequence
          Length = 133856

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 428    cgccatccttgccatggcctcgct 451
              ||||||||| ||||||||||||||
Sbjct: 132683 cgccatcctggccatggcctcgct 132706
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>emb|AL606627.3|OSJN00052 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0067K08,
            complete sequence
          Length = 170765

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 428  cgccatccttgccatggcctcgct 451
            ||||||||| ||||||||||||||
Sbjct: 4876 cgccatcctggccatggcctcgct 4899
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>emb|CT009512.6| Mouse DNA sequence from clone RP23-94B13 on chromosome 14, complete
              sequence
          Length = 232468

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 54     cctttttcttcagaaaaaga 73
              ||||||||||||||||||||
Sbjct: 114477 cctttttcttcagaaaaaga 114458
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>gb|DP000021.1| Monodelphis domestica target 1 genomic scaffold
          Length = 1833844

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 477    agtctcttcatttcagattc 496
              ||||||||||||||||||||
Sbjct: 901789 agtctcttcatttcagattc 901808
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>emb|AL831742.6| Mouse DNA sequence from clone RP23-11F9 on chromosome 2, complete
              sequence
          Length = 230800

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 64     cagaaaaagaacaagaactt 83
              ||||||||||||||||||||
Sbjct: 208947 cagaaaaagaacaagaactt 208928


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,325,582
Number of Sequences: 3902068
Number of extensions: 5325582
Number of successful extensions: 107756
Number of sequences better than 10.0: 62
Number of HSP's better than 10.0 without gapping: 63
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 107484
Number of HSP's gapped (non-prelim): 270
length of query: 538
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 515
effective length of database: 17,143,297,704
effective search space: 8828798317560
effective search space used: 8828798317560
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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