ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags26k20
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK105381.1| Oryza sativa (japonica cultivar-group) cDNA clon... 244 3e-61
2dbj|AK103766.1| Oryza sativa (japonica cultivar-group) cDNA clon... 236 7e-59
3ref|NM_190286.1| Oryza sativa (japonica cultivar-group), predic... 230 4e-57
4dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 145 2e-31
5dbj|AP003349.4| Oryza sativa (japonica cultivar-group) genomic D... 145 2e-31
6dbj|AP003418.2| Oryza sativa (japonica cultivar-group) genomic D... 145 2e-31
7gb|AC110380.4| Mus musculus BAC clone RP24-194P24 from 14, compl... 46 0.14
8gb|AC151902.3| Mus musculus BAC clone RP23-240L13 from chromosom... 46 0.14
9ref|XM_947275.1| Theileria annulata strain Ankara hypothetical p... 42 2.2
10gb|AC034208.5|AC034208 Homo sapiens chromosome 5 clone CTC-443O1... 42 2.2
11gb|AC008920.7|AC008920 Homo sapiens chromosome 5 clone CTD-2278A... 42 2.2
12ref|XM_455900.1| Kluyveromyces lactis NRRL Y-1140, KLLA0F18282g ... 40 8.5
13ref|XM_651538.1| Entamoeba histolytica HM-1:IMSS protein kinase ... 40 8.5
14gb|AC162125.3| Oryctolagus cuniculus clone LB1-187K2, complete s... 40 8.5
15emb|AL596208.3| Human DNA sequence from clone RP11-18M16 on chro... 40 8.5
16emb|AL158847.22| Human DNA sequence from clone RP4-735C1 on chro... 40 8.5
17emb|CR382126.1| Kluyveromyces lactis strain NRRL Y-1140 chromoso... 40 8.5
18emb|BX572095.1| Prochlorococcus marinus MIT9313 complete genome;... 40 8.5
19gb|AC156278.8| Mus musculus 6 BAC RP24-249N9 (Roswell Park Cance... 40 8.5
20ref|XM_939150.1| PREDICTED: Homo sapiens hypothetical protein LO... 40 8.5
21ref|XM_929826.1| PREDICTED: Homo sapiens hypothetical protein LO... 40 8.5
22gb|AY942799.1| Cucumis sativus cyclin-related protein 1 (M1) mRN... 40 8.5
23gb|BC029835.1| Homo sapiens, clone IMAGE:5169759, mRNA 40 8.5
24gb|AC016706.6| Homo sapiens BAC clone RP11-215D12 from 2, comple... 40 8.5
25gb|AC139362.2| Homo sapiens chromosome 15, clone RP11-580I1, com... 40 8.5
26emb|AL845356.8| Mouse DNA sequence from clone RP23-29O14 on chro... 40 8.5
27emb|AJ289879.1|EAM289879 Erwinia amylovora ycfA gene and ycfB gene 40 8.5
28dbj|AK130854.1| Homo sapiens cDNA FLJ27344 fis, clone TST03461 40 8.5
29emb|AL136039.4|CNS01DVU Human chromosome 14 DNA sequence BAC R-7... 40 8.5 
>dbj|AK105381.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-121-B04, full
            insert sequence
          Length = 1942

 Score =  244 bits (123), Expect = 3e-61
 Identities = 252/295 (85%)
 Strand = Plus / Minus

                                                                        
Query: 332  ctcaggttcagattgagcagatgactcatttgtttctggtccgttttccccgattgagct 391
            |||||| |||||  ||||||||||||| ||||||||  |||| |||||  |  | |||| 
Sbjct: 1603 ctcaggctcagaccgagcagatgactcgtttgtttccagtccattttctgcagtcgagcc 1544

                                                                        
Query: 392  acgcgaatcggtcctcgagtgcttgaagctcatgagaacagacatcttctgctgcttttc 451
            ||| ||||||||||||||||| |||||||||| |||||||||||||||||| ||||| ||
Sbjct: 1543 acgggaatcggtcctcgagtgtttgaagctcaggagaacagacatcttctgttgcttctc 1484

                                                                        
Query: 452  cattactagggattcacattggctcttcatttggtcatatgacacaggattggtggagac 511
            ||| ||||||| ||| ||||||||||||||||| || || |  ||| | ||||  || ||
Sbjct: 1483 catgactagggcttcgcattggctcttcatttgatcgtagggtacaaggttggcagaaac 1424

                                                                        
Query: 512  tggaacgttagcaacttgccttgctgtctcatgaacagattccatcagttgattcacatt 571
            |||| | |||||||| |||||||||||||||||||| ||||| || |||||||| || ||
Sbjct: 1423 tggagcattagcaacctgccttgctgtctcatgaaccgattctattagttgattgacgtt 1364

                                                                   
Query: 572  tagaacatcagatgaagccatagatcctgatgttttcctgtcagactgcgatcca 626
            ||||||||| ||||||||||||||||| || |||||||||||||| |||||||||
Sbjct: 1363 tagaacatctgatgaagccatagatccagaggttttcctgtcagattgcgatcca 1309



 Score = 42.1 bits (21), Expect = 2.2
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 28   ctctacaacggtaacggaaatttgtacac 56
            ||||||||| ||||| |||||||||||||
Sbjct: 1909 ctctacaacagtaacagaaatttgtacac 1881
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>dbj|AK103766.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033143H20, full
            insert sequence
          Length = 3420

 Score =  236 bits (119), Expect = 7e-59
 Identities = 251/295 (85%)
 Strand = Plus / Minus

                                                                        
Query: 332  ctcaggttcagattgagcagatgactcatttgtttctggtccgttttccccgattgagct 391
            |||||| |||||  ||||||||||||| ||||||||  |||| |||||  |  | |||| 
Sbjct: 3081 ctcaggctcagaccgagcagatgactcgtttgtttccagtccattttctgcagtcgagcc 3022

                                                                        
Query: 392  acgcgaatcggtcctcgagtgcttgaagctcatgagaacagacatcttctgctgcttttc 451
            ||| ||||||||||||||||| |||||||||| |||||||||||||||||| ||||| ||
Sbjct: 3021 acgggaatcggtcctcgagtgtttgaagctcaggagaacagacatcttctgttgcttctc 2962

                                                                        
Query: 452  cattactagggattcacattggctcttcatttggtcatatgacacaggattggtggagac 511
            ||| ||||||| ||| ||||||||||||||||| || || |  ||| | ||||  || ||
Sbjct: 2961 catgactagggcttcgcattggctcttcatttgatcgtagggtacaaggttggcagaaac 2902

                                                                        
Query: 512  tggaacgttagcaacttgccttgctgtctcatgaacagattccatcagttgattcacatt 571
            |||| | |||||||| |||||||||||||||||||| ||||| || |||||||| || ||
Sbjct: 2901 tggagcattagcaacctgccttgctgtctcatgaaccgattctattagttgattgacgtt 2842

                                                                   
Query: 572  tagaacatcagatgaagccatagatcctgatgttttcctgtcagactgcgatcca 626
            ||||||||| ||||||||||||||||| || |||||||| ||||| |||||||||
Sbjct: 2841 tagaacatctgatgaagccatagatccagaggttttcctttcagattgcgatcca 2787



 Score = 42.1 bits (21), Expect = 2.2
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 28   ctctacaacggtaacggaaatttgtacac 56
            ||||||||| ||||| |||||||||||||
Sbjct: 3387 ctctacaacagtaacagaaatttgtacac 3359
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>ref|NM_190286.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 2685

 Score =  230 bits (116), Expect = 4e-57
 Identities = 209/240 (87%)
 Strand = Plus / Minus

                                                                        
Query: 387  gagctacgcgaatcggtcctcgagtgcttgaagctcatgagaacagacatcttctgctgc 446
            |||| ||| ||||||||||||||||| |||||||||| |||||||||||||||||| |||
Sbjct: 2639 gagccacgggaatcggtcctcgagtgtttgaagctcaggagaacagacatcttctgttgc 2580

                                                                        
Query: 447  ttttccattactagggattcacattggctcttcatttggtcatatgacacaggattggtg 506
            || ||||| ||||||| ||| ||||||||||||||||| || || |  ||| | ||||  
Sbjct: 2579 ttctccatgactagggcttcgcattggctcttcatttgatcgtagggtacaaggttggca 2520

                                                                        
Query: 507  gagactggaacgttagcaacttgccttgctgtctcatgaacagattccatcagttgattc 566
            || |||||| | |||||||| |||||||||||||||||||| ||||| || |||||||| 
Sbjct: 2519 gaaactggagcattagcaacctgccttgctgtctcatgaaccgattctattagttgattg 2460

                                                                        
Query: 567  acatttagaacatcagatgaagccatagatcctgatgttttcctgtcagactgcgatcca 626
            || ||||||||||| ||||||||||||||||| || |||||||||||||| |||||||||
Sbjct: 2459 acgtttagaacatctgatgaagccatagatccagaggttttcctgtcagattgcgatcca 2400
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score =  145 bits (73), Expect = 2e-31
 Identities = 139/161 (86%)
 Strand = Plus / Plus

                                                                            
Query: 387      gagctacgcgaatcggtcctcgagtgcttgaagctcatgagaacagacatcttctgctgc 446
                |||| ||| ||||||||||||||||| |||||||||| |||||||||||||||||| |||
Sbjct: 39046032 gagccacgggaatcggtcctcgagtgtttgaagctcaggagaacagacatcttctgttgc 39046091

                                                                            
Query: 447      ttttccattactagggattcacattggctcttcatttggtcatatgacacaggattggtg 506
                || ||||| ||||||| ||| ||||||||||||||||| || || |  ||| | ||||  
Sbjct: 39046092 ttctccatgactagggcttcgcattggctcttcatttgatcgtagggtacaaggttggca 39046151

                                                         
Query: 507      gagactggaacgttagcaacttgccttgctgtctcatgaac 547
                || |||||| | |||||||| ||||||||||||||||||||
Sbjct: 39046152 gaaactggagcattagcaacctgccttgctgtctcatgaac 39046192



 Score = 91.7 bits (46), Expect = 3e-15
 Identities = 70/78 (89%)
 Strand = Plus / Plus

                                                                            
Query: 549      gattccatcagttgattcacatttagaacatcagatgaagccatagatcctgatgttttc 608
                ||||| || |||||||| || ||||||||||| ||||||||||||||||| || ||||||
Sbjct: 39046306 gattctattagttgattgacgtttagaacatctgatgaagccatagatccagaggttttc 39046365

                                  
Query: 609      ctgtcagactgcgatcca 626
                |||||||| |||||||||
Sbjct: 39046366 ctgtcagattgcgatcca 39046383



 Score = 42.1 bits (21), Expect = 2.2
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                             
Query: 28       ctctacaacggtaacggaaatttgtacac 56
                ||||||||| ||||| |||||||||||||
Sbjct: 39045579 ctctacaacagtaacagaaatttgtacac 39045607
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>dbj|AP003349.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0674H09
          Length = 142955

 Score =  145 bits (73), Expect = 2e-31
 Identities = 139/161 (86%)
 Strand = Plus / Plus

                                                                          
Query: 387    gagctacgcgaatcggtcctcgagtgcttgaagctcatgagaacagacatcttctgctgc 446
              |||| ||| ||||||||||||||||| |||||||||| |||||||||||||||||| |||
Sbjct: 119665 gagccacgggaatcggtcctcgagtgtttgaagctcaggagaacagacatcttctgttgc 119724

                                                                          
Query: 447    ttttccattactagggattcacattggctcttcatttggtcatatgacacaggattggtg 506
              || ||||| ||||||| ||| ||||||||||||||||| || || |  ||| | ||||  
Sbjct: 119725 ttctccatgactagggcttcgcattggctcttcatttgatcgtagggtacaaggttggca 119784

                                                       
Query: 507    gagactggaacgttagcaacttgccttgctgtctcatgaac 547
              || |||||| | |||||||| ||||||||||||||||||||
Sbjct: 119785 gaaactggagcattagcaacctgccttgctgtctcatgaac 119825



 Score = 91.7 bits (46), Expect = 3e-15
 Identities = 70/78 (89%)
 Strand = Plus / Plus

                                                                          
Query: 549    gattccatcagttgattcacatttagaacatcagatgaagccatagatcctgatgttttc 608
              ||||| || |||||||| || ||||||||||| ||||||||||||||||| || ||||||
Sbjct: 119939 gattctattagttgattgacgtttagaacatctgatgaagccatagatccagaggttttc 119998

                                
Query: 609    ctgtcagactgcgatcca 626
              |||||||| |||||||||
Sbjct: 119999 ctgtcagattgcgatcca 120016



 Score = 42.1 bits (21), Expect = 2.2
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                           
Query: 28     ctctacaacggtaacggaaatttgtacac 56
              ||||||||| ||||| |||||||||||||
Sbjct: 119212 ctctacaacagtaacagaaatttgtacac 119240
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>dbj|AP003418.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0506A10
          Length = 145265

 Score =  145 bits (73), Expect = 2e-31
 Identities = 139/161 (86%)
 Strand = Plus / Plus

                                                                         
Query: 387   gagctacgcgaatcggtcctcgagtgcttgaagctcatgagaacagacatcttctgctgc 446
             |||| ||| ||||||||||||||||| |||||||||| |||||||||||||||||| |||
Sbjct: 64012 gagccacgggaatcggtcctcgagtgtttgaagctcaggagaacagacatcttctgttgc 64071

                                                                         
Query: 447   ttttccattactagggattcacattggctcttcatttggtcatatgacacaggattggtg 506
             || ||||| ||||||| ||| ||||||||||||||||| || || |  ||| | ||||  
Sbjct: 64072 ttctccatgactagggcttcgcattggctcttcatttgatcgtagggtacaaggttggca 64131

                                                      
Query: 507   gagactggaacgttagcaacttgccttgctgtctcatgaac 547
             || |||||| | |||||||| ||||||||||||||||||||
Sbjct: 64132 gaaactggagcattagcaacctgccttgctgtctcatgaac 64172



 Score = 91.7 bits (46), Expect = 3e-15
 Identities = 70/78 (89%)
 Strand = Plus / Plus

                                                                         
Query: 549   gattccatcagttgattcacatttagaacatcagatgaagccatagatcctgatgttttc 608
             ||||| || |||||||| || ||||||||||| ||||||||||||||||| || ||||||
Sbjct: 64286 gattctattagttgattgacgtttagaacatctgatgaagccatagatccagaggttttc 64345

                               
Query: 609   ctgtcagactgcgatcca 626
             |||||||| |||||||||
Sbjct: 64346 ctgtcagattgcgatcca 64363



 Score = 42.1 bits (21), Expect = 2.2
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                          
Query: 28    ctctacaacggtaacggaaatttgtacac 56
             ||||||||| ||||| |||||||||||||
Sbjct: 63559 ctctacaacagtaacagaaatttgtacac 63587
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>gb|AC110380.4| Mus musculus BAC clone RP24-194P24 from 14, complete sequence
          Length = 177581

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                    
Query: 117   gcagaaagaattgacttggaaga 139
             |||||||||||||||||||||||
Sbjct: 66459 gcagaaagaattgacttggaaga 66437
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>gb|AC151902.3| Mus musculus BAC clone RP23-240L13 from chromosome 14, complete sequence
          Length = 170417

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                     
Query: 117    gcagaaagaattgacttggaaga 139
              |||||||||||||||||||||||
Sbjct: 162016 gcagaaagaattgacttggaaga 161994
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>ref|XM_947275.1| Theileria annulata strain Ankara hypothetical protein (TA12685)
            partial mRNA
          Length = 3798

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 276  tcatcactggatgttgaatcg 296
            |||||||||||||||||||||
Sbjct: 2375 tcatcactggatgttgaatcg 2355
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>gb|AC034208.5|AC034208 Homo sapiens chromosome 5 clone CTC-443O18, complete sequence
          Length = 26336

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 129   gacttggaagacatgtaattt 149
             |||||||||||||||||||||
Sbjct: 17325 gacttggaagacatgtaattt 17305
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>gb|AC008920.7|AC008920 Homo sapiens chromosome 5 clone CTD-2278A17, complete sequence
          Length = 120261

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 129  gacttggaagacatgtaattt 149
            |||||||||||||||||||||
Sbjct: 1967 gacttggaagacatgtaattt 1987
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>ref|XM_455900.1| Kluyveromyces lactis NRRL Y-1140, KLLA0F18282g predicted mRNA
          Length = 2550

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 319  ttgtcaaatgtgactcaggt 338
            ||||||||||||||||||||
Sbjct: 1325 ttgtcaaatgtgactcaggt 1344
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>ref|XM_651538.1| Entamoeba histolytica HM-1:IMSS protein kinase (10.t00023)  partial
            mRNA
          Length = 5115

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 550  attccatcagttgattcacattta 573
            |||||||||| |||||||||||||
Sbjct: 3728 attccatcagatgattcacattta 3705
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>gb|AC162125.3| Oryctolagus cuniculus clone LB1-187K2, complete sequence
          Length = 112129

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 434    catcttctgctgcttttcca 453
              ||||||||||||||||||||
Sbjct: 104035 catcttctgctgcttttcca 104054
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>emb|AL596208.3| Human DNA sequence from clone RP11-18M16 on chromosome 6, complete
              sequence
          Length = 114796

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 561    tgattcacatttagaacatc 580
              ||||||||||||||||||||
Sbjct: 102797 tgattcacatttagaacatc 102778
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>emb|AL158847.22| Human DNA sequence from clone RP4-735C1 on chromosome 1 Contains the 3'
             end of the GSTM5 gene for glutathione S-transferase M5,
             the GSTM3 gene for glutathione S-transferase M3 (brain),
             the EPS8L3 gene for EPS8-like 3, the 3' end of a novel
             gene, a NADH dehydrogenase (ubiquinone) 1 alpha subcomplex
             5 13kDa (NDUFA5) pseudogene and the 5' end of a novel
             gene, complete sequence
          Length = 133451

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 146   atttgtaaacagttctgtat 165
             ||||||||||||||||||||
Sbjct: 98858 atttgtaaacagttctgtat 98877
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>emb|CR382126.1| Kluyveromyces lactis strain NRRL Y-1140 chromosome F of strain NRRL Y-1140
               of Kluyveromyces lactis
          Length = 2602197

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 319     ttgtcaaatgtgactcaggt 338
               ||||||||||||||||||||
Sbjct: 1687780 ttgtcaaatgtgactcaggt 1687799
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>emb|BX572095.1| Prochlorococcus marinus MIT9313 complete genome; segment 1/7
          Length = 349391

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 329   tgactcaggttcagattgag 348
             ||||||||||||||||||||
Sbjct: 69381 tgactcaggttcagattgag 69362
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>gb|AC156278.8| Mus musculus 6 BAC RP24-249N9 (Roswell Park Cancer Institute (C57BL/6J
             Male) Mouse BAC Library) complete sequence
          Length = 162919

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 515   aacgttagcaacttgccttgctgt 538
             ||||||||| ||||||||||||||
Sbjct: 44077 aacgttagctacttgccttgctgt 44100
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>ref|XM_939150.1| PREDICTED: Homo sapiens hypothetical protein LOC650061 (LOC650061),
            mRNA
          Length = 1175

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 428  aacagacatcttctgctgcttttc 451
            ||||||||||||| ||||||||||
Sbjct: 1003 aacagacatcttcagctgcttttc 980
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>ref|XM_929826.1| PREDICTED: Homo sapiens hypothetical protein LOC646867 (LOC646867),
            mRNA
          Length = 1175

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 428  aacagacatcttctgctgcttttc 451
            ||||||||||||| ||||||||||
Sbjct: 1003 aacagacatcttcagctgcttttc 980
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>gb|AY942799.1| Cucumis sativus cyclin-related protein 1 (M1) mRNA, partial cds
          Length = 1836

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 465  tcacattggctcttcatttggtcatatg 492
            ||||||||||| |||||||| |||||||
Sbjct: 1187 tcacattggcttttcatttgatcatatg 1160
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>gb|BC029835.1| Homo sapiens, clone IMAGE:5169759, mRNA
          Length = 1205

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 428  aacagacatcttctgctgcttttc 451
            ||||||||||||| ||||||||||
Sbjct: 1009 aacagacatcttcagctgcttttc 986
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>gb|AC016706.6| Homo sapiens BAC clone RP11-215D12 from 2, complete sequence
          Length = 184121

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 599    tgatgttttcctgtcagact 618
              ||||||||||||||||||||
Sbjct: 135589 tgatgttttcctgtcagact 135570
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>gb|AC139362.2| Homo sapiens chromosome 15, clone RP11-580I1, complete sequence
          Length = 195033

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 140    catgtaatttgtaaacagtt 159
              ||||||||||||||||||||
Sbjct: 153735 catgtaatttgtaaacagtt 153716
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>emb|AL845356.8| Mouse DNA sequence from clone RP23-29O14 on chromosome 2, complete
             sequence
          Length = 141599

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 542   atgaacagattccatcagtt 561
             ||||||||||||||||||||
Sbjct: 88920 atgaacagattccatcagtt 88939
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>emb|AJ289879.1|EAM289879 Erwinia amylovora ycfA gene and ycfB gene
          Length = 1510

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 548 agattccatcagttgattca 567
           ||||||||||||||||||||
Sbjct: 65  agattccatcagttgattca 46
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>dbj|AK130854.1| Homo sapiens cDNA FLJ27344 fis, clone TST03461
          Length = 765

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 428 aacagacatcttctgctgcttttc 451
           ||||||||||||| ||||||||||
Sbjct: 593 aacagacatcttcagctgcttttc 570
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>emb|AL136039.4|CNS01DVU Human chromosome 14 DNA sequence BAC R-799P8 of library RPCI-11 from
              chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 174788

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 428    aacagacatcttctgctgcttttc 451
              ||||||||||||| ||||||||||
Sbjct: 124250 aacagacatcttcagctgcttttc 124273


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,806,320
Number of Sequences: 3902068
Number of extensions: 4806320
Number of successful extensions: 88636
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 88517
Number of HSP's gapped (non-prelim): 111
length of query: 626
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 603
effective length of database: 17,143,297,704
effective search space: 10337408515512
effective search space used: 10337408515512
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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