ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbags26k12 |
|---|---|
| Clone Library Name | barley_pub |
>SYM_SYNY3 (Q55729) Methionyl-tRNA synthetase (EC 6.1.1.10) (Methionine--tRNA| ligase) (MetRS) Length = 532 Score = 53.9 bits (128), Expect = 3e-07 Identities = 34/80 (42%), Positives = 44/80 (55%), Gaps = 8/80 (10%) Frame = -2 Query: 571 LVIILEAMRIIAIALSPITPSLSLRIYTQLGFT--EDQFRTLRWD------DTKWGALKA 416 L +LE++R+ A LSPI P LS +IY QLGFT DQ+R+ WG L A Sbjct: 453 LYSVLESIRLSAYLLSPIVPRLSTKIYQQLGFTWDFDQWRSPLEQAEEFNRHQSWGQLGA 512 Query: 415 GQAMMEPKPIFAKIETEVEE 356 Q + +PIF K+E EE Sbjct: 513 NQNLPPAQPIFTKLELPAEE 532
>SYM_SYNEL (P59081) Methionyl-tRNA synthetase (EC 6.1.1.10) (Methionine--tRNA| ligase) (MetRS) Length = 529 Score = 51.2 bits (121), Expect = 2e-06 Identities = 28/74 (37%), Positives = 43/74 (58%), Gaps = 5/74 (6%) Frame = -2 Query: 580 AKDLVIILEAMRIIAIALSPITPSLSLRIYTQLGFTEDQFRTLRWD-----DTKWGALKA 416 A+ L +LE++R++A L+PI P LS IY QLG++ ++ D +WG L A Sbjct: 446 AEILYCVLESVRLVAYVLAPIIPQLSEAIYGQLGYSIRFNGSIAPDLLGDRQAQWGVLPA 505 Query: 415 GQAMMEPKPIFAKI 374 Q + P+PIF K+ Sbjct: 506 SQPLANPEPIFQKL 519
>SYM_ANASP (Q8Z068) Methionyl-tRNA synthetase (EC 6.1.1.10) (Methionine--tRNA| ligase) (MetRS) Length = 530 Score = 49.3 bits (116), Expect = 8e-06 Identities = 28/71 (39%), Positives = 40/71 (56%), Gaps = 4/71 (5%) Frame = -2 Query: 571 LVIILEAMRIIAIALSPITPSLSLRIYTQLG----FTEDQFRTLRWDDTKWGALKAGQAM 404 L +LE++R+ A LSP+ P++S IY QLG F E T +WG L Q + Sbjct: 455 LYTVLESVRLAAYLLSPVIPNISSNIYQQLGFGINFNEQTDITPFAIHAQWGLLSNKQQL 514 Query: 403 MEPKPIFAKIE 371 +P+PIF +IE Sbjct: 515 GQPQPIFKRIE 525
>SYM_FUSNN (Q8RE57) Methionyl-tRNA synthetase (EC 6.1.1.10) (Methionine--tRNA| ligase) (MetRS) Length = 636 Score = 47.0 bits (110), Expect = 4e-05 Identities = 27/71 (38%), Positives = 38/71 (53%), Gaps = 1/71 (1%) Frame = -2 Query: 565 IILEAMRIIAIALSPITPSLSLRIYTQLGFTEDQFRTLRWDDTK-WGALKAGQAMMEPKP 389 I+ E + IA ++P P + +I QLG +D L++DD K W K G + E P Sbjct: 448 ILCEGLYKIAFLIAPYMPESAQKISNQLGIDKD-ITNLKFDDIKEWSIFKEGHKLGEASP 506 Query: 388 IFAKIETEVEE 356 IF +IE E EE Sbjct: 507 IFPRIEIEKEE 517
>SYM_THETN (Q8RDD1) Methionyl-tRNA synthetase (EC 6.1.1.10) (Methionine--tRNA| ligase) (MetRS) Length = 638 Score = 47.0 bits (110), Expect = 4e-05 Identities = 23/68 (33%), Positives = 38/68 (55%) Frame = -2 Query: 562 ILEAMRIIAIALSPITPSLSLRIYTQLGFTEDQFRTLRWDDTKWGALKAGQAMMEPKPIF 383 + E++R I I +SP P+ +++ QLG TED W+ K+G LK G + + +F Sbjct: 447 LAESLRFIGILISPFMPNTPKKMFEQLGITED---LTTWESLKFGLLKEGTRVKRGEILF 503 Query: 382 AKIETEVE 359 +I+ E E Sbjct: 504 PRIDVEKE 511
>SYM_SULAC (Q4J8M3) Methionyl-tRNA synthetase (EC 6.1.1.10) (Methionine--tRNA| ligase) (MetRS) Length = 571 Score = 41.6 bits (96), Expect = 0.002 Identities = 25/72 (34%), Positives = 37/72 (51%) Frame = -2 Query: 571 LVIILEAMRIIAIALSPITPSLSLRIYTQLGFTEDQFRTLRWDDTKWGALKAGQAMMEPK 392 L I + ++R +AI L PI P+ S +Y QLG + + T WD + G + E + Sbjct: 481 LYISVNSLRTLAIMLYPIMPTYSSNLYQQLGLSNLESET--WDSAGSLKIMPGHKIGEIR 538 Query: 391 PIFAKIETEVEE 356 +F KIE EE Sbjct: 539 SLFKKIEMSPEE 550
>SYM_RICPR (Q9ZCP0) Methionyl-tRNA synthetase (EC 6.1.1.10) (Methionine--tRNA| ligase) (MetRS) Length = 508 Score = 40.4 bits (93), Expect = 0.004 Identities = 26/67 (38%), Positives = 39/67 (58%), Gaps = 2/67 (2%) Frame = -2 Query: 571 LVIILEAMRIIAIALSPITPSLSLRIYTQLGFTEDQ--FRTLRWDDTKWGALKAGQAMME 398 L +LE +R IAI L P P+ + ++ QLG ++++ F+ L D ALKAG ++E Sbjct: 444 LYSLLEVLRYIAIMLQPFVPNSANKMLDQLGVSKEERLFKHLVRDH----ALKAGSNILE 499 Query: 397 PKPIFAK 377 P IF K Sbjct: 500 PSIIFPK 506
>SYM_LISMF (Q724N6) Methionyl-tRNA synthetase (EC 6.1.1.10) (Methionine--tRNA| ligase) (MetRS) Length = 665 Score = 40.0 bits (92), Expect = 0.005 Identities = 24/70 (34%), Positives = 38/70 (54%), Gaps = 2/70 (2%) Frame = -2 Query: 562 ILEAMRIIAIALSPITPSLSLRIYTQLGFTEDQFRTLRWDDT-KWGALKAGQAMMEP-KP 389 + E +RIIA+ L P I+ QLG E+ + +WD +G + AG +++ P Sbjct: 463 LAENLRIIAVLLQPFLTRTPGEIFLQLGLQEENLK--KWDSIYGYGEIPAGTTVVKKGTP 520 Query: 388 IFAKIETEVE 359 IF ++E EVE Sbjct: 521 IFPRLEAEVE 530
>SYM_RICCN (Q92GS6) Methionyl-tRNA synthetase (EC 6.1.1.10) (Methionine--tRNA| ligase) (MetRS) Length = 508 Score = 39.3 bits (90), Expect = 0.008 Identities = 27/69 (39%), Positives = 38/69 (55%), Gaps = 2/69 (2%) Frame = -2 Query: 571 LVIILEAMRIIAIALSPITPSLSLRIYTQLGFTEDQ--FRTLRWDDTKWGALKAGQAMME 398 L +LE +R IAI L P PS + ++ QLG +++ F+ L D T L AG ++E Sbjct: 444 LYALLEVLRYIAIMLLPFIPSSANKMLDQLGVNKEERLFKHLIRDYT----LTAGSNILE 499 Query: 397 PKPIFAKIE 371 P IF K E Sbjct: 500 PTIIFPKFE 508
>SYM_LISMO (Q8YAF2) Methionyl-tRNA synthetase (EC 6.1.1.10) (Methionine--tRNA| ligase) (MetRS) Length = 664 Score = 38.9 bits (89), Expect = 0.011 Identities = 23/70 (32%), Positives = 38/70 (54%), Gaps = 2/70 (2%) Frame = -2 Query: 562 ILEAMRIIAIALSPITPSLSLRIYTQLGFTEDQFRTLRWDDT-KWGALKAGQAMMEP-KP 389 + E +RIIA+ L P I+ QLG E+ + +WD +G + AG +++ P Sbjct: 462 LAENLRIIAVLLQPFLTRTPGEIFLQLGLQEENLK--KWDSIYGYGEIPAGTTVVKKGTP 519 Query: 388 IFAKIETEVE 359 IF +++ EVE Sbjct: 520 IFPRLDAEVE 529
>SYM_LISIN (Q92F90) Methionyl-tRNA synthetase (EC 6.1.1.10) (Methionine--tRNA| ligase) (MetRS) Length = 664 Score = 37.0 bits (84), Expect = 0.042 Identities = 22/70 (31%), Positives = 37/70 (52%), Gaps = 2/70 (2%) Frame = -2 Query: 562 ILEAMRIIAIALSPITPSLSLRIYTQLGFTEDQFRTLRWDDT-KWGALKAGQAMMEP-KP 389 + E +RIIA+ L P I+ QLG E+ + +WD +G + G +++ P Sbjct: 462 LAENLRIIAVLLQPFLTRTPGEIFLQLGLQEENLK--KWDSIYGYGEIPEGTTVVKKGTP 519 Query: 388 IFAKIETEVE 359 IF +++ EVE Sbjct: 520 IFPRLDAEVE 529
>SYM_BACST (P23920) Methionyl-tRNA synthetase (EC 6.1.1.10) (Methionine--tRNA| ligase) (MetRS) Length = 649 Score = 36.2 bits (82), Expect = 0.071 Identities = 19/69 (27%), Positives = 36/69 (52%), Gaps = 1/69 (1%) Frame = -2 Query: 562 ILEAMRIIAIALSPITPSLSLRIYTQLGFTEDQFRTLRWDDT-KWGALKAGQAMMEPKPI 386 + E++R A+ L P RI+TQLG ++ + WD +G + G + + +P+ Sbjct: 450 LAESLRYTAVLLQPFLTRTPERIFTQLGISDRSLK--EWDSLYDFGLIPEGTNVQKGEPL 507 Query: 385 FAKIETEVE 359 F +++ VE Sbjct: 508 FPRLDIGVE 516
>SYM_THEMA (O33925) Methionyl-tRNA synthetase (EC 6.1.1.10) (Methionine--tRNA| ligase) (MetRS) Length = 629 Score = 36.2 bits (82), Expect = 0.071 Identities = 18/65 (27%), Positives = 34/65 (52%) Frame = -2 Query: 559 LEAMRIIAIALSPITPSLSLRIYTQLGFTEDQFRTLRWDDTKWGALKAGQAMMEPKPIFA 380 LEA+ +A+ P+ P S ++ ++ F E + + WG LK G ++ +P+F Sbjct: 448 LEAVFKVALMTLPVMPDTSEEVFRRVSFEE---KPSKEHLENWGVLKPGSTVIHGEPLFK 504 Query: 379 KIETE 365 KI+ + Sbjct: 505 KIDAK 509
>SYM1_BACCR (Q81JA8) Methionyl-tRNA synthetase 1 (EC 6.1.1.10)| (Methionine--tRNA ligase 1) (MetRS 1) Length = 660 Score = 35.8 bits (81), Expect = 0.093 Identities = 20/69 (28%), Positives = 35/69 (50%), Gaps = 1/69 (1%) Frame = -2 Query: 562 ILEAMRIIAIALSPITPSLSLRIYTQLGFTEDQFRTLRWDDTKW-GALKAGQAMMEPKPI 386 + E +R I L P +++ QLG T++ ++ W+ G + AG + + PI Sbjct: 462 LAEVLRQTGIMLMPFLTVAPSKMFAQLGLTDEAHKS--WESLSTIGCIPAGTKVEKGNPI 519 Query: 385 FAKIETEVE 359 F ++E EVE Sbjct: 520 FPRLEMEVE 528
>SYM_METKA (Q8TX28) Methionyl-tRNA synthetase (EC 6.1.1.10) (Methionine--tRNA| ligase) (MetRS) Length = 668 Score = 33.9 bits (76), Expect = 0.35 Identities = 19/69 (27%), Positives = 36/69 (52%) Frame = -2 Query: 550 MRIIAIALSPITPSLSLRIYTQLGFTEDQFRTLRWDDTKWGALKAGQAMMEPKPIFAKIE 371 ++ +A+ L+P P + +I+ LG+ ED + W++ + + EP+PIF K+ Sbjct: 481 VKALAVMLAPFLPDSAEKIWQSLGY-EDSVHDVDWEEALEDV--ETKEIPEPEPIFPKVT 537 Query: 370 TEVEENGQA 344 E E +A Sbjct: 538 EEDLEKAKA 546
>SYM_STAHJ (Q4L3E7) Methionyl-tRNA synthetase (EC 6.1.1.10) (Methionine--tRNA| ligase) (MetRS) Length = 659 Score = 33.5 bits (75), Expect = 0.46 Identities = 22/69 (31%), Positives = 35/69 (50%), Gaps = 1/69 (1%) Frame = -2 Query: 562 ILEAMRIIAIALSPITPSLSLRIYTQLGFTEDQFRTLRWDDTKWGALKAGQAMME-PKPI 386 ++E +R A+ L P I+ QL E + L + ++GALK + E P PI Sbjct: 460 LVENIRFAAVLLRPFLTHAPKEIFKQLNINEPELFELESLE-QYGALKQPIMVTEKPTPI 518 Query: 385 FAKIETEVE 359 F +++TE E Sbjct: 519 FPRLDTEAE 527
>SYL_PSESM (Q87VX3) Leucyl-tRNA synthetase (EC 6.1.1.4) (Leucine--tRNA ligase)| (LeuRS) Length = 868 Score = 33.5 bits (75), Expect = 0.46 Identities = 13/36 (36%), Positives = 23/36 (63%) Frame = -2 Query: 577 KDLVIILEAMRIIAIALSPITPSLSLRIYTQLGFTE 470 +D ++ E + + + L+PITP +S ++TQLG E Sbjct: 753 QDRALLQEGLETVTLLLAPITPHISHELWTQLGHNE 788
>SYM_STAS1 (Q49UZ9) Methionyl-tRNA synthetase (EC 6.1.1.10) (Methionine--tRNA| ligase) (MetRS) Length = 658 Score = 33.1 bits (74), Expect = 0.60 Identities = 18/68 (26%), Positives = 34/68 (50%) Frame = -2 Query: 562 ILEAMRIIAIALSPITPSLSLRIYTQLGFTEDQFRTLRWDDTKWGALKAGQAMMEPKPIF 383 ++E +RIIA+ L P +I++QL + L + + +P+PIF Sbjct: 460 LVENIRIIAVLLRPFLTHAPKQIFSQLNINAPELFELESIEQYGALTEPIMVSGKPEPIF 519 Query: 382 AKIETEVE 359 ++++EVE Sbjct: 520 PRLDSEVE 527
>SYM_ENTFA (Q837B3) Methionyl-tRNA synthetase (EC 6.1.1.10) (Methionine--tRNA| ligase) (MetRS) Length = 669 Score = 33.1 bits (74), Expect = 0.60 Identities = 19/72 (26%), Positives = 37/72 (51%), Gaps = 1/72 (1%) Frame = -2 Query: 571 LVIILEAMRIIAIALSPITPSLSLRIYTQLGFTEDQFRTLRWDDTKWGALKAGQAM-MEP 395 ++ + E++RI+AI L P+ +I+ QLG + T+ ++ +G + + Sbjct: 458 MIHLAESLRIVAILLQPVMTETPGKIFEQLGLDPE---TMNMENIHFGEFPTDVTVTSKG 514 Query: 394 KPIFAKIETEVE 359 PIF ++E E E Sbjct: 515 TPIFPRLEIETE 526
>SYM_LACPL (Q88Z97) Methionyl-tRNA synthetase (EC 6.1.1.10) (Methionine--tRNA| ligase) (MetRS) Length = 683 Score = 32.7 bits (73), Expect = 0.79 Identities = 21/66 (31%), Positives = 34/66 (51%), Gaps = 1/66 (1%) Frame = -2 Query: 553 AMRIIAIALSPITPSLSLRIYTQLGFTEDQFRTLRWDDTKWGALKAG-QAMMEPKPIFAK 377 ++R+IA +SP+ I+TQLG TL D + L AG Q + + PIF + Sbjct: 468 SLRVIASLISPVMTHAPKEIFTQLGLDP---ATLAIADLQLADLPAGAQVVAKGTPIFPR 524 Query: 376 IETEVE 359 ++ + E Sbjct: 525 VDMDAE 530
>SYM_AERPE (Q9YCY3) Methionyl-tRNA synthetase (EC 6.1.1.10) (Methionine--tRNA| ligase) (MetRS) Length = 572 Score = 32.3 bits (72), Expect = 1.0 Identities = 18/68 (26%), Positives = 34/68 (50%) Frame = -2 Query: 559 LEAMRIIAIALSPITPSLSLRIYTQLGFTEDQFRTLRWDDTKWGALKAGQAMMEPKPIFA 380 L A++ +A L+P TP + R+++ LG + WD+ L G ++ +P+F Sbjct: 483 LYAVKTLAHLLAPFTPDAADRLWSMLGLAGSVHEAV-WDEWLDRPLPGGARIVRVEPLFQ 541 Query: 379 KIETEVEE 356 K+ + E Sbjct: 542 KLPDDFLE 549
>SYM_CLOAB (Q97EW5) Methionyl-tRNA synthetase (EC 6.1.1.10) (Methionine--tRNA| ligase) (MetRS) Length = 644 Score = 32.3 bits (72), Expect = 1.0 Identities = 17/66 (25%), Positives = 35/66 (53%) Frame = -2 Query: 562 ILEAMRIIAIALSPITPSLSLRIYTQLGFTEDQFRTLRWDDTKWGALKAGQAMMEPKPIF 383 ++E++R +A L+P P +I TQL D + +L + + +AG + + + IF Sbjct: 450 LVESLRFVATTLTPFLPETGEKIKTQLNIELDTWESL----SAFDGTRAGTKVSKGEVIF 505 Query: 382 AKIETE 365 +I+ + Sbjct: 506 PRIDVD 511
>SYM_SULSO (Q9UWW2) Methionyl-tRNA synthetase (EC 6.1.1.10) (Methionine--tRNA| ligase) (MetRS) Length = 573 Score = 31.6 bits (70), Expect = 1.8 Identities = 20/71 (28%), Positives = 33/71 (46%) Frame = -2 Query: 571 LVIILEAMRIIAIALSPITPSLSLRIYTQLGFTEDQFRTLRWDDTKWGALKAGQAMMEPK 392 L I +++ IAI L P+ PS + +IY L +WD ++ G + + Sbjct: 482 LYIGTNSVKTIAILLYPLMPSHAQKIYEMLNM--GNIENEKWDVASTLSVNPGHKIGKVN 539 Query: 391 PIFAKIETEVE 359 +F K+E E E Sbjct: 540 VLFKKLEPEFE 550
>SYL_BLOFL (Q7VRA6) Leucyl-tRNA synthetase (EC 6.1.1.4) (Leucine--tRNA ligase)| (LeuRS) Length = 867 Score = 31.6 bits (70), Expect = 1.8 Identities = 17/49 (34%), Positives = 26/49 (53%) Frame = -2 Query: 577 KDLVIILEAMRIIAIALSPITPSLSLRIYTQLGFTEDQFRTLRWDDTKW 431 +D ++ EA+ II L P TP +S ++ +LG+T DDT W Sbjct: 752 QDRSVLHEALSIIVKLLYPFTPHISYILWKELGYTN------TIDDTTW 794
>SYL_PSEAE (Q9HX33) Leucyl-tRNA synthetase (EC 6.1.1.4) (Leucine--tRNA ligase)| (LeuRS) Length = 873 Score = 30.4 bits (67), Expect = 3.9 Identities = 17/53 (32%), Positives = 26/53 (49%) Frame = -2 Query: 580 AKDLVIILEAMRIIAIALSPITPSLSLRIYTQLGFTEDQFRTLRWDDTKWGAL 422 A+D +I E + + + L+PITP + ++ QLG E RW AL Sbjct: 757 AQDRALIQEGLETVVLLLAPITPHICHVLWGQLGHAEAVI-DARWPSVDESAL 808
>SYMM_HUMAN (Q96GW9) Methionyl-tRNA synthetase, mitochondrial precursor (EC| 6.1.1.10) (Methionine--tRNA ligase 2) (Mitochondrial methionine--tRNA ligase) (MtMetRS) Length = 593 Score = 30.4 bits (67), Expect = 3.9 Identities = 12/36 (33%), Positives = 23/36 (63%) Frame = -2 Query: 571 LVIILEAMRIIAIALSPITPSLSLRIYTQLGFTEDQ 464 L + LE +R+ L P+TPSL+ ++ ++LG + + Sbjct: 510 LHVALECLRVFGTLLQPVTPSLADKLLSRLGVSASE 545
>SYM_STAAW (Q8NY00) Methionyl-tRNA synthetase (EC 6.1.1.10) (Methionine--tRNA| ligase) (MetRS) Length = 657 Score = 30.4 bits (67), Expect = 3.9 Identities = 17/68 (25%), Positives = 30/68 (44%) Frame = -2 Query: 562 ILEAMRIIAIALSPITPSLSLRIYTQLGFTEDQFRTLRWDDTKWGALKAGQAMMEPKPIF 383 ++E +R A+ L P I+ QL QF + ++ +PKPIF Sbjct: 460 LVENIRYAAVLLRPFLTHAPKEIFEQLNINNPQFMEFSSLEQYGVLTESIMVTGQPKPIF 519 Query: 382 AKIETEVE 359 ++++E E Sbjct: 520 PRLDSEAE 527
>SYM_STAAS (Q6GBZ8) Methionyl-tRNA synthetase (EC 6.1.1.10) (Methionine--tRNA| ligase) (MetRS) Length = 657 Score = 30.4 bits (67), Expect = 3.9 Identities = 17/68 (25%), Positives = 30/68 (44%) Frame = -2 Query: 562 ILEAMRIIAIALSPITPSLSLRIYTQLGFTEDQFRTLRWDDTKWGALKAGQAMMEPKPIF 383 ++E +R A+ L P I+ QL QF + ++ +PKPIF Sbjct: 460 LVENIRYAAVLLRPFLTHAPKEIFEQLNINNPQFMEFSSLEQYGVLTESIMVTGQPKPIF 519 Query: 382 AKIETEVE 359 ++++E E Sbjct: 520 PRLDSEAE 527
>SYM_STAAN (P67579) Methionyl-tRNA synthetase (EC 6.1.1.10) (Methionine--tRNA| ligase) (MetRS) Length = 657 Score = 30.4 bits (67), Expect = 3.9 Identities = 17/68 (25%), Positives = 30/68 (44%) Frame = -2 Query: 562 ILEAMRIIAIALSPITPSLSLRIYTQLGFTEDQFRTLRWDDTKWGALKAGQAMMEPKPIF 383 ++E +R A+ L P I+ QL QF + ++ +PKPIF Sbjct: 460 LVENIRYAAVLLRPFLTHAPKEIFEQLNINNPQFMEFSSLEQYGVLTESIMVTGQPKPIF 519 Query: 382 AKIETEVE 359 ++++E E Sbjct: 520 PRLDSEAE 527
>SYM_STAAM (P67578) Methionyl-tRNA synthetase (EC 6.1.1.10) (Methionine--tRNA| ligase) (MetRS) Length = 657 Score = 30.4 bits (67), Expect = 3.9 Identities = 17/68 (25%), Positives = 30/68 (44%) Frame = -2 Query: 562 ILEAMRIIAIALSPITPSLSLRIYTQLGFTEDQFRTLRWDDTKWGALKAGQAMMEPKPIF 383 ++E +R A+ L P I+ QL QF + ++ +PKPIF Sbjct: 460 LVENIRYAAVLLRPFLTHAPKEIFEQLNINNPQFMEFSSLEQYGVLTESIMVTGQPKPIF 519 Query: 382 AKIETEVE 359 ++++E E Sbjct: 520 PRLDSEAE 527
>SYM_STAAC (Q5HII6) Methionyl-tRNA synthetase (EC 6.1.1.10) (Methionine--tRNA| ligase) (MetRS) Length = 657 Score = 30.4 bits (67), Expect = 3.9 Identities = 19/69 (27%), Positives = 33/69 (47%), Gaps = 1/69 (1%) Frame = -2 Query: 562 ILEAMRIIAIALSPITPSLSLRIYTQLGFTEDQFRTLRWDDTKWGALKAGQAMM-EPKPI 386 ++E +R A+ L P I+ QL QF + ++G L + +PKPI Sbjct: 460 LVENIRYAAVLLRPFLTHAPKEIFEQLNINNPQFMEFSSLE-QYGVLNESIMVTGQPKPI 518 Query: 385 FAKIETEVE 359 F ++++E E Sbjct: 519 FPRLDSEAE 527
>SYL_DESVH (Q72CT7) Leucyl-tRNA synthetase (EC 6.1.1.4) (Leucine--tRNA ligase)| (LeuRS) Length = 829 Score = 30.0 bits (66), Expect = 5.1 Identities = 18/48 (37%), Positives = 24/48 (50%) Frame = -2 Query: 565 IILEAMRIIAIALSPITPSLSLRIYTQLGFTEDQFRTLRWDDTKWGAL 422 ++ A+ + LSP TP LS ++ LG TE TL W K AL Sbjct: 718 VLSSAVSTVLTLLSPFTPHLSEELWALLGHTE-SVSTLPWPRWKEDAL 764
>SYM_STAAR (Q6GJI1) Methionyl-tRNA synthetase (EC 6.1.1.10) (Methionine--tRNA| ligase) (MetRS) Length = 657 Score = 29.6 bits (65), Expect = 6.7 Identities = 17/68 (25%), Positives = 29/68 (42%) Frame = -2 Query: 562 ILEAMRIIAIALSPITPSLSLRIYTQLGFTEDQFRTLRWDDTKWGALKAGQAMMEPKPIF 383 ++E +R A+ L P I+ QL QF + + +PKPIF Sbjct: 460 LVENIRYAAVLLRPFLTHAPKEIFEQLNINNPQFMEFSSLEQYGVLTEPIMVTGQPKPIF 519 Query: 382 AKIETEVE 359 ++++E E Sbjct: 520 PRLDSEAE 527
>SIPC_SALTY (Q56020) Cell invasion protein sipC (Effector protein sipC)| Length = 409 Score = 29.3 bits (64), Expect = 8.7 Identities = 20/49 (40%), Positives = 27/49 (55%), Gaps = 3/49 (6%) Frame = -3 Query: 216 SHIFFPLRNGNHLI---SDGVDSIKSLVAKKALTFLQRELNLAILFSQA 79 SH + NG + + ++GVDS+KSL KK T + LN A L S A Sbjct: 220 SHSIKNVLNGQNSVKLGAEGVDSLKSLNMKKTGTDATKNLNDATLKSNA 268
>SIPC_SALTI (Q56135) Cell invasion protein sipC (Effector protein sipC)| Length = 409 Score = 29.3 bits (64), Expect = 8.7 Identities = 20/49 (40%), Positives = 27/49 (55%), Gaps = 3/49 (6%) Frame = -3 Query: 216 SHIFFPLRNGNHLI---SDGVDSIKSLVAKKALTFLQRELNLAILFSQA 79 SH + NG + + ++GVDS+KSL KK T + LN A L S A Sbjct: 220 SHSIKNVLNGQNSVKLGAEGVDSLKSLNMKKTGTDATKNLNDATLKSNA 268
>SYM_METTH (O26687) Methionyl-tRNA synthetase (EC 6.1.1.10) (Methionine--tRNA| ligase) (MetRS) Length = 651 Score = 29.3 bits (64), Expect = 8.7 Identities = 20/64 (31%), Positives = 29/64 (45%), Gaps = 2/64 (3%) Frame = -2 Query: 529 LSPITPSLSLRIYTQLGFTEDQFRTLRWDDTKWG--ALKAGQAMMEPKPIFAKIETEVEE 356 L P PS + RI + + +D WG L+ GQ + KP+F+KI E E Sbjct: 485 LRPFMPSAAGRILSIMNL----------EDEAWGFHELREGQVIERAKPLFSKITDEAIE 534 Query: 355 NGQA 344 +A Sbjct: 535 EEKA 538 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 72,469,985 Number of Sequences: 219361 Number of extensions: 1280254 Number of successful extensions: 3125 Number of sequences better than 10.0: 36 Number of HSP's better than 10.0 without gapping: 3060 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3119 length of database: 80,573,946 effective HSP length: 106 effective length of database: 57,321,680 effective search space used: 5044307840 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
