ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags26k07
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_463960.1| Oryza sativa (japonica cultivar-group), mRNA 161 3e-36
2dbj|AK121932.1| Oryza sativa (japonica cultivar-group) cDNA clon... 161 3e-36
3dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 133 6e-28
4dbj|AP005311.3| Oryza sativa (japonica cultivar-group) genomic D... 133 6e-28
5gb|AC149472.23| Medicago truncatula clone mth2-77f21, complete s... 52 0.002
6ref|XM_534644.2| PREDICTED: Canis familiaris similar to general ... 48 0.028
7ref|XM_852703.1| PREDICTED: Canis familiaris similar to general ... 48 0.028
8ref|XM_852662.1| PREDICTED: Canis familiaris similar to general ... 48 0.028
9ref|XM_852619.1| PREDICTED: Canis familiaris similar to general ... 48 0.028
10gb|AC166370.3| Mus musculus BAC clone RP23-20I24 from chromosome... 44 0.44
11gb|AC160341.2| Mus musculus BAC clone RP24-226P13 from chromosom... 44 0.44
12ref|XM_877159.1| PREDICTED: Bos taurus similar to general transc... 42 1.7
13ref|XM_589322.2| PREDICTED: Bos taurus similar to general transc... 42 1.7
14ref|XM_865794.1| PREDICTED: Bos taurus similar to general transc... 42 1.7
15emb|CR847906.11| Zebrafish DNA sequence from clone DKEYP-4C4 in ... 42 1.7
16emb|AL731577.7| Human DNA sequence from clone RP11-298J20 on chr... 42 1.7
17emb|AJ420072.1|CGL420072 Corynebacterium glutamicum plasmid pTET3 42 1.7
18gb|AC025944.8| Homo sapiens chromosome 10 clone RP11-237L11, com... 42 1.7
19dbj|AP007171.1| Aspergillus oryzae RIB40 genomic DNA, SC011 42 1.7
20dbj|AB218617.1| Rattus norvegicus genomic DNA, chromosome 4, clo... 42 1.7
21gb|AC026886.9| Homo sapiens chromosome 10 clone RP11-371O16, com... 42 1.7
22gb|AC152418.5| Mus musculus BAC clone RP23-7L11 from chromosome ... 40 6.8
23gb|AC145383.3| Oryza sativa chromosome 3 BAC OSJNBa0038E17 genom... 40 6.8
24gb|AY448015.1|AY448010S6 Ipomoea trifida haplotype S1 self-incom... 40 6.8
25ref|NM_011015.1| Mus musculus origin recognition complex, subuni... 40 6.8
26gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 40 6.8
27gb|AC136363.2| Homo sapiens chromosome 17, clone RP11-18L18, com... 40 6.8
28gb|AC147144.2| Pan troglodytes BAC clone CH251-278J22 from Y, co... 40 6.8
29emb|CR388416.6| Zebrafish DNA sequence from clone DKEY-165B20 in... 40 6.8
30emb|CR388179.8| Zebrafish DNA sequence from clone CH211-79G12 in... 40 6.8
31gb|AC017075.8| Homo sapiens BAC clone RP11-435D24 from 7, comple... 40 6.8
32emb|AL354827.5| Human DNA sequence from clone RP11-280J7 on chro... 40 6.8
33gb|AC144520.1| Homo sapiens fosmid clone XXFOS-8678H9 from 2, co... 40 6.8
34gb|AC128676.2| Homo sapiens BAC clone RP11-65G11 from UL, comple... 40 6.8
35gb|AC129338.2| Homo sapiens BAC clone RP11-51A19 from UL, comple... 40 6.8
36gb|AC020654.23| Homo sapiens 12 BAC RP11-496H24 (Roswell Park Ca... 40 6.8
37emb|BX950220.11| Zebrafish DNA sequence from clone DKEYP-123A12 ... 40 6.8
38emb|BX572628.6| Zebrafish DNA sequence from clone CH211-223G7 in... 40 6.8
39emb|BX936362.13| Zebrafish DNA sequence from clone DKEY-190J3 in... 40 6.8
40emb|CR381657.7| Zebrafish DNA sequence from clone CH211-229L10, ... 40 6.8
41dbj|BS000638.2| Pan troglodytes chromosome Y clone: PTBY-011C06,... 40 6.8
42dbj|BS000637.2| Pan troglodytes chromosome Y clone: PTBY-009K23,... 40 6.8
43dbj|BS000660.1| Pan troglodytes chromosome Y clone:PTBY-005M17, ... 40 6.8
44gb|DP000054.1| Pan troglodytes chromosome Y, partial sequence 40 6.8
45emb|AL732379.5|CNS08C92 Oryza sativa chromosome 3, . BAC OSJNBa0... 40 6.8
46dbj|AK141741.1| Mus musculus 9 days embryo whole body cDNA, RIKE... 40 6.8
47gb|AC093749.3| Homo sapiens BAC clone RP11-30B7 from 4, complete... 40 6.8
48dbj|AK145260.1| Mus musculus mammary gland RCB-0527 Jyg-MC(B) cD... 40 6.8
49dbj|AK161814.1| Mus musculus 13 days embryo male testis cDNA, RI... 40 6.8
50dbj|AK164035.1| Mus musculus 7 days embryo whole body cDNA, RIKE... 40 6.8
51emb|BX664606.17| Zebrafish DNA sequence from clone CH211-171L17 ... 40 6.8
52emb|BX649300.4| Zebrafish DNA sequence from clone CH211-195I16 i... 40 6.8
53gb|AC008979.8| Homo sapiens chromosome 19 clone LLNLF-152D8, com... 40 6.8
54gb|BC038007.1| Mus musculus origin recognition complex, subunit ... 40 6.8
55gb|AC021842.7|AC021842 Homo sapiens chromosome 8, clone RP11-472... 40 6.8
56dbj|AK044628.1| Mus musculus adult retina cDNA, RIKEN full-lengt... 40 6.8
57dbj|AK042130.1| Mus musculus 3 days neonate thymus cDNA, RIKEN f... 40 6.8
58dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.8
59gb|AC016956.20| Homo sapiens 12 BAC RP11-56H16 (Roswell Park Can... 40 6.8
60gb|AC079080.5| Homo sapiens BAC clone RP11-162O12 from 4, comple... 40 6.8
61gb|AC145543.3| Homo sapiens chromosome UNKNOWN clone RP11-1278L2... 40 6.8
62gb|AC010723.3|AC010723 Homo sapiens BAC clone RP11-139C10 from Y... 40 6.8
63gb|AC123577.3| Homo sapiens BAC clone CTD-2415C3 from 7, complet... 40 6.8
64gb|AC124008.4| Homo sapiens BAC clone RP11-529E24 from 7, comple... 40 6.8
65gb|AC131274.9| Homo sapiens chromosome 17, clone RP11-285M22, co... 40 6.8
66gb|AC010510.6|AC010510 Homo sapiens chromosome 19 clone LLNLF-19... 40 6.8
67emb|BX571951.7| Zebrafish DNA sequence from clone DKEY-5A9 in li... 40 6.8
68emb|BX649586.4| Zebrafish DNA sequence from clone CH211-1A22 in ... 40 6.8
69gb|AY105094.1| Zea mays PCO088415 mRNA sequence 40 6.8
70emb|AL645797.11| Mouse DNA sequence from clone RP23-153J5 on chr... 40 6.8
71gb|AC150745.2| Mus musculus BAC clone RP24-77E13 from 7, complet... 40 6.8
72gb|BC015073.1| Mus musculus origin recognition complex, subunit ... 40 6.8
73emb|AL929150.12| Zebrafish DNA sequence from clone CH211-196H16 ... 40 6.8
74emb|BX901958.23| Zebrafish DNA sequence from clone DKEY-3H2 in l... 40 6.8
75emb|AL929041.10| Zebrafish DNA sequence from clone CH211-197K17 ... 40 6.8
76emb|AL626783.16| Mouse DNA sequence from clone RP23-406B13 on ch... 40 6.8
77emb|AL713885.1|CNS07YP2 Mus musculus chromosome 11 region in the... 40 6.8
78emb|AL713884.1|CNS07YP1 Mus musculus chromosome 11 region in the... 40 6.8
79emb|AJ003133.1|MMORC1 Mus musculus mRNA for ORC1-related protein... 40 6.8 
>ref|XM_463960.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1374

 Score =  161 bits (81), Expect = 3e-36
 Identities = 137/155 (88%), Gaps = 3/155 (1%)
 Strand = Plus / Minus

                                                                        
Query: 351  actactgcctttgatctggcaaggagtttaaatcaggcatgctgacacggctgaattctg 410
            |||||||||||||||| || |  || ||||| || ||||   |||||||| |||||||||
Sbjct: 1020 actactgcctttgatcaggtacagaatttaagtcgggca---tgacacggttgaattctg 964

                                                                        
Query: 411  acccacaagttgaacatttcttatgatacttgcagaatattgacaagcaaactgaacaaa 470
            ||||||| || ||||| ||||||||||||||||||||||| || || |||||||||||||
Sbjct: 963  acccacaggtcgaacacttcttatgatacttgcagaatatcgataaacaaactgaacaaa 904

                                               
Query: 471  catatcccatgtcaatagtcttcttgtggcagaaa 505
            ||||||||||||||||||||||||| |||||||||
Sbjct: 903  catatcccatgtcaatagtcttcttatggcagaaa 869
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>dbj|AK121932.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033106M17, full
            insert sequence
          Length = 1375

 Score =  161 bits (81), Expect = 3e-36
 Identities = 137/155 (88%), Gaps = 3/155 (1%)
 Strand = Plus / Minus

                                                                        
Query: 351  actactgcctttgatctggcaaggagtttaaatcaggcatgctgacacggctgaattctg 410
            |||||||||||||||| || |  || ||||| || ||||   |||||||| |||||||||
Sbjct: 1020 actactgcctttgatcaggtacagaatttaagtcgggca---tgacacggttgaattctg 964

                                                                        
Query: 411  acccacaagttgaacatttcttatgatacttgcagaatattgacaagcaaactgaacaaa 470
            ||||||| || ||||| ||||||||||||||||||||||| || || |||||||||||||
Sbjct: 963  acccacaggtcgaacacttcttatgatacttgcagaatatcgataaacaaactgaacaaa 904

                                               
Query: 471  catatcccatgtcaatagtcttcttgtggcagaaa 505
            ||||||||||||||||||||||||| |||||||||
Sbjct: 903  catatcccatgtcaatagtcttcttatggcagaaa 869
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
               sequence
          Length = 35954743

 Score =  133 bits (67), Expect = 6e-28
 Identities = 88/95 (92%)
 Strand = Plus / Plus

                                                                           
Query: 411     acccacaagttgaacatttcttatgatacttgcagaatattgacaagcaaactgaacaaa 470
               ||||||| || ||||| ||||||||||||||||||||||| || || |||||||||||||
Sbjct: 1348038 acccacaggtcgaacacttcttatgatacttgcagaatatcgataaacaaactgaacaaa 1348097

                                                  
Query: 471     catatcccatgtcaatagtcttcttgtggcagaaa 505
               ||||||||||||||||||||||||| |||||||||
Sbjct: 1348098 catatcccatgtcaatagtcttcttatggcagaaa 1348132
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>dbj|AP005311.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0482F12
          Length = 147735

 Score =  133 bits (67), Expect = 6e-28
 Identities = 88/95 (92%)
 Strand = Plus / Plus

                                                                         
Query: 411   acccacaagttgaacatttcttatgatacttgcagaatattgacaagcaaactgaacaaa 470
             ||||||| || ||||| ||||||||||||||||||||||| || || |||||||||||||
Sbjct: 29310 acccacaggtcgaacacttcttatgatacttgcagaatatcgataaacaaactgaacaaa 29369

                                                
Query: 471   catatcccatgtcaatagtcttcttgtggcagaaa 505
             ||||||||||||||||||||||||| |||||||||
Sbjct: 29370 catatcccatgtcaatagtcttcttatggcagaaa 29404
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>gb|AC149472.23| Medicago truncatula clone mth2-77f21, complete sequence
          Length = 120151

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 53/62 (85%)
 Strand = Plus / Minus

                                                                          
Query: 443    cagaatattgacaagcaaactgaacaaacatatcccatgtcaatagtcttcttgtggcag 502
              |||||||| || ||||| |||||||| ||||| ||||||||||| || | ||| ||||||
Sbjct: 106947 cagaatatggataagcatactgaacatacatagcccatgtcaattgtttgcttatggcag 106888

                
Query: 503    aa 504
              ||
Sbjct: 106887 aa 106886
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>ref|XM_534644.2| PREDICTED: Canis familiaris similar to general transcription factor
           IIH, polypeptide 3, 34kDa, transcript variant 1
           (LOC477446), mRNA
          Length = 1026

 Score = 48.1 bits (24), Expect = 0.028
 Identities = 42/48 (87%)
 Strand = Plus / Minus

                                                           
Query: 440 ttgcagaatattgacaagcaaactgaacaaacatatcccatgtcaata 487
           |||||||||||||||||||| || ||||| ||||| || || ||||||
Sbjct: 840 ttgcagaatattgacaagcacacagaacagacatagccaatttcaata 793
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>ref|XM_852703.1| PREDICTED: Canis familiaris similar to general transcription factor
           IIH, polypeptide 3, 34kDa, transcript variant 4
           (LOC477446), mRNA
          Length = 972

 Score = 48.1 bits (24), Expect = 0.028
 Identities = 42/48 (87%)
 Strand = Plus / Minus

                                                           
Query: 440 ttgcagaatattgacaagcaaactgaacaaacatatcccatgtcaata 487
           |||||||||||||||||||| || ||||| ||||| || || ||||||
Sbjct: 786 ttgcagaatattgacaagcacacagaacagacatagccaatttcaata 739
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>ref|XM_852662.1| PREDICTED: Canis familiaris similar to general transcription factor
           IIH, polypeptide 3, 34kDa, transcript variant 3
           (LOC477446), mRNA
          Length = 897

 Score = 48.1 bits (24), Expect = 0.028
 Identities = 42/48 (87%)
 Strand = Plus / Minus

                                                           
Query: 440 ttgcagaatattgacaagcaaactgaacaaacatatcccatgtcaata 487
           |||||||||||||||||||| || ||||| ||||| || || ||||||
Sbjct: 711 ttgcagaatattgacaagcacacagaacagacatagccaatttcaata 664
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>ref|XM_852619.1| PREDICTED: Canis familiaris similar to general transcription factor
           IIH, polypeptide 3, 34kDa, transcript variant 2
           (LOC477446), mRNA
          Length = 797

 Score = 48.1 bits (24), Expect = 0.028
 Identities = 42/48 (87%)
 Strand = Plus / Minus

                                                           
Query: 440 ttgcagaatattgacaagcaaactgaacaaacatatcccatgtcaata 487
           |||||||||||||||||||| || ||||| ||||| || || ||||||
Sbjct: 611 ttgcagaatattgacaagcacacagaacagacatagccaatttcaata 564
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>gb|AC166370.3| Mus musculus BAC clone RP23-20I24 from chromosome 9, complete sequence
          Length = 242229

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 377    tttaaatcaggcatgctgacac 398
              ||||||||||||||||||||||
Sbjct: 194632 tttaaatcaggcatgctgacac 194653
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>gb|AC160341.2| Mus musculus BAC clone RP24-226P13 from chromosome 9, complete sequence
          Length = 139613

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 377   tttaaatcaggcatgctgacac 398
             ||||||||||||||||||||||
Sbjct: 44213 tttaaatcaggcatgctgacac 44192
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>ref|XM_877159.1| PREDICTED: Bos taurus similar to general transcription factor IIH,
           polypeptide 3, 34kDa, transcript variant 4 (LOC511896),
           mRNA
          Length = 949

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 440 ttgcagaatattgacaagcaaactgaaca 468
           |||||||||||||||||||| || |||||
Sbjct: 555 ttgcagaatattgacaagcacacagaaca 527
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>ref|XM_589322.2| PREDICTED: Bos taurus similar to general transcription factor IIH,
           polypeptide 3, 34kDa, transcript variant 1 (LOC511896),
           mRNA
          Length = 949

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 440 ttgcagaatattgacaagcaaactgaaca 468
           |||||||||||||||||||| || |||||
Sbjct: 555 ttgcagaatattgacaagcacacagaaca 527
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>ref|XM_865794.1| PREDICTED: Bos taurus similar to general transcription factor IIH,
           polypeptide 3, 34kDa, transcript variant 2 (LOC511896),
           mRNA
          Length = 1262

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 440 ttgcagaatattgacaagcaaactgaaca 468
           |||||||||||||||||||| || |||||
Sbjct: 868 ttgcagaatattgacaagcacacagaaca 840
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>emb|CR847906.11| Zebrafish DNA sequence from clone DKEYP-4C4 in linkage group 6,
             complete sequence
          Length = 198346

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 84    atctattttccatcattgttc 104
             |||||||||||||||||||||
Sbjct: 58246 atctattttccatcattgttc 58226



 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 85    tctattttccatcattgttc 104
             ||||||||||||||||||||
Sbjct: 40305 tctattttccatcattgttc 40286
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>emb|AL731577.7| Human DNA sequence from clone RP11-298J20 on chromosome 10 Contains
             three novel genes, the 5' end of the ZRANB1 gene for  zinc
             finger RAN-binding domain containing 1 and a CpG island,
             complete sequence
          Length = 91516

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 242   acattgacagcccttcaaatataca 266
             |||||||||||||||| ||||||||
Sbjct: 82751 acattgacagcccttccaatataca 82727
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>emb|AJ420072.1|CGL420072 Corynebacterium glutamicum plasmid pTET3
          Length = 27856

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 237   ttaatacattgacagcccttc 257
             |||||||||||||||||||||
Sbjct: 10767 ttaatacattgacagcccttc 10747
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>gb|AC025944.8| Homo sapiens chromosome 10 clone RP11-237L11, complete sequence
          Length = 173904

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 242   acattgacagcccttcaaatataca 266
             |||||||||||||||| ||||||||
Sbjct: 16152 acattgacagcccttccaatataca 16128
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>dbj|AP007171.1| Aspergillus oryzae RIB40 genomic DNA, SC011
          Length = 2505489

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 232    ggtagttaatacattgacagc 252
              |||||||||||||||||||||
Sbjct: 771349 ggtagttaatacattgacagc 771329
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>dbj|AB218617.1| Rattus norvegicus genomic DNA, chromosome 4, clone: CH230-65K18, complete
              sequence
          Length = 193613

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 331    catttccctgtttacagagta 351
              |||||||||||||||||||||
Sbjct: 134951 catttccctgtttacagagta 134971
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>gb|AC026886.9| Homo sapiens chromosome 10 clone RP11-371O16, complete sequence
          Length = 173898

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 242    acattgacagcccttcaaatataca 266
              |||||||||||||||| ||||||||
Sbjct: 157747 acattgacagcccttccaatataca 157771
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>gb|AC152418.5| Mus musculus BAC clone RP23-7L11 from chromosome 7, complete sequence
          Length = 249571

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 189    ttcacttgggataatgtcca 208
              ||||||||||||||||||||
Sbjct: 144129 ttcacttgggataatgtcca 144148
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>gb|AC145383.3| Oryza sativa chromosome 3 BAC OSJNBa0038E17 genomic sequence, complete
             sequence
          Length = 141691

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 330   gcatttccctgtttacagag 349
             ||||||||||||||||||||
Sbjct: 32164 gcatttccctgtttacagag 32183
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>gb|AY448015.1|AY448010S6 Ipomoea trifida haplotype S1 self-incompatibility (S-) locus, contig
             SR6
          Length = 39512

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 34    ttagctagatatcatgtttgctcc 57
             ||||||||||||||| ||||||||
Sbjct: 37366 ttagctagatatcatttttgctcc 37343
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>ref|NM_011015.1| Mus musculus origin recognition complex, subunit 1-like
            (S.cereviaiae) (Orc1l), transcript variant A, mRNA
          Length = 3017

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 48   tgtttgctcccaaagaagagtgaa 71
            ||||||||| ||||||||||||||
Sbjct: 2624 tgtttgctctcaaagaagagtgaa 2647
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 330      gcatttccctgtttacagag 349
                ||||||||||||||||||||
Sbjct: 24655978 gcatttccctgtttacagag 24655997
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>gb|AC136363.2| Homo sapiens chromosome 17, clone RP11-18L18, complete sequence
          Length = 87532

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 418   agttgaacatttcttatgat 437
             ||||||||||||||||||||
Sbjct: 20584 agttgaacatttcttatgat 20565



 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 418   agttgaacatttcttatgat 437
             ||||||||||||||||||||
Sbjct: 20412 agttgaacatttcttatgat 20393
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>gb|AC147144.2| Pan troglodytes BAC clone CH251-278J22 from Y, complete sequence
          Length = 178957

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 23     tttgcatcagcttagctagatatc 46
              ||||||||||||||||| ||||||
Sbjct: 119650 tttgcatcagcttagcttgatatc 119673
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>emb|CR388416.6| Zebrafish DNA sequence from clone DKEY-165B20 in linkage group 14,
              complete sequence
          Length = 207245

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 85     tctattttccatcattgttc 104
              ||||||||||||||||||||
Sbjct: 199424 tctattttccatcattgttc 199443
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>emb|CR388179.8| Zebrafish DNA sequence from clone CH211-79G12 in linkage group 14,
             complete sequence
          Length = 129866

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 85    tctattttccatcattgttc 104
             ||||||||||||||||||||
Sbjct: 28328 tctattttccatcattgttc 28347
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>gb|AC017075.8| Homo sapiens BAC clone RP11-435D24 from 7, complete sequence
          Length = 193277

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 418   agttgaacatttcttatgat 437
             ||||||||||||||||||||
Sbjct: 19071 agttgaacatttcttatgat 19052
to top
>emb|AL354827.5| Human DNA sequence from clone RP11-280J7 on chromosome 13, complete
             sequence
          Length = 127641

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 421   tgaacatttcttatgatact 440
             ||||||||||||||||||||
Sbjct: 22734 tgaacatttcttatgatact 22753
to top
>gb|AC144520.1| Homo sapiens fosmid clone XXFOS-8678H9 from 2, complete sequence
          Length = 38818

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 414   cacaagttgaacatttcttatgat 437
             ||||||||||||||||||| ||||
Sbjct: 37648 cacaagttgaacatttcttttgat 37625
to top
>gb|AC128676.2| Homo sapiens BAC clone RP11-65G11 from UL, complete sequence
          Length = 159143

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 418   agttgaacatttcttatgat 437
             ||||||||||||||||||||
Sbjct: 25329 agttgaacatttcttatgat 25310
to top
>gb|AC129338.2| Homo sapiens BAC clone RP11-51A19 from UL, complete sequence
          Length = 169277

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 418    agttgaacatttcttatgat 437
              ||||||||||||||||||||
Sbjct: 139057 agttgaacatttcttatgat 139038



 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 418   agttgaacatttcttatgat 437
             ||||||||||||||||||||
Sbjct: 42995 agttgaacatttcttatgat 43014
to top
>gb|AC020654.23| Homo sapiens 12 BAC RP11-496H24 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 160019

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 418   agttgaacatttcttatgat 437
             ||||||||||||||||||||
Sbjct: 64160 agttgaacatttcttatgat 64179



 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 418   agttgaacatttcttatgat 437
             ||||||||||||||||||||
Sbjct: 61442 agttgaacatttcttatgat 61461
to top
>emb|BX950220.11| Zebrafish DNA sequence from clone DKEYP-123A12 in linkage group 20
             Contains three novel genes and a CpG island, complete
             sequence
          Length = 22646

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 84    atctattttccatcattgtt 103
             ||||||||||||||||||||
Sbjct: 12181 atctattttccatcattgtt 12200
to top
>emb|BX572628.6| Zebrafish DNA sequence from clone CH211-223G7 in linkage group 4,
              complete sequence
          Length = 165454

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 85     tctattttccatcattgttc 104
              ||||||||||||||||||||
Sbjct: 143437 tctattttccatcattgttc 143418
to top
>emb|BX936362.13| Zebrafish DNA sequence from clone DKEY-190J3 in linkage group 22,
              complete sequence
          Length = 164857

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 84     atctattttccatcattgtt 103
              ||||||||||||||||||||
Sbjct: 161229 atctattttccatcattgtt 161210



 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 84    atctattttccatcattgtt 103
             ||||||||||||||||||||
Sbjct: 29990 atctattttccatcattgtt 30009
to top
>emb|CR381657.7| Zebrafish DNA sequence from clone CH211-229L10, complete sequence
          Length = 140774

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 84    atctattttccatcattgtt 103
             ||||||||||||||||||||
Sbjct: 51830 atctattttccatcattgtt 51811
to top
>dbj|BS000638.2| Pan troglodytes chromosome Y clone: PTBY-011C06, complete sequence
          Length = 86985

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 23    tttgcatcagcttagctagatatc 46
             ||||||||||||||||| ||||||
Sbjct: 41986 tttgcatcagcttagcttgatatc 42009
to top
>dbj|BS000637.2| Pan troglodytes chromosome Y clone: PTBY-009K23, complete sequence
          Length = 144454

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 23     tttgcatcagcttagctagatatc 46
              ||||||||||||||||| ||||||
Sbjct: 128693 tttgcatcagcttagcttgatatc 128716
to top
>dbj|BS000660.1| Pan troglodytes chromosome Y clone:PTBY-005M17, complete sequences
          Length = 93004

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 23    tttgcatcagcttagctagatatc 46
             ||||||||||||||||| ||||||
Sbjct: 24413 tttgcatcagcttagcttgatatc 24436
to top
>gb|DP000054.1| Pan troglodytes chromosome Y, partial sequence
          Length = 23952694

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 23       tttgcatcagcttagctagatatc 46
                ||||||||||||||||| ||||||
Sbjct: 19527736 tttgcatcagcttagcttgatatc 19527713
to top
>emb|AL732379.5|CNS08C92 Oryza sativa chromosome 3, . BAC OSJNBa0025B02 of library OSJNBa from
             chromosome 3 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 136470

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 330   gcatttccctgtttacagag 349
             ||||||||||||||||||||
Sbjct: 88024 gcatttccctgtttacagag 88043
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>dbj|AK141741.1| Mus musculus 9 days embryo whole body cDNA, RIKEN full-length
            enriched library, clone:D030049K10 product:origin
            recognition complex, subunit 1-like (S.cereviaiae), full
            insert sequence
          Length = 2844

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 48   tgtttgctcccaaagaagagtgaa 71
            ||||||||| ||||||||||||||
Sbjct: 2637 tgtttgctctcaaagaagagtgaa 2660
to top
>gb|AC093749.3| Homo sapiens BAC clone RP11-30B7 from 4, complete sequence
          Length = 163102

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 418    agttgaacatttcttatgat 437
              ||||||||||||||||||||
Sbjct: 127304 agttgaacatttcttatgat 127323
to top
>dbj|AK145260.1| Mus musculus mammary gland RCB-0527 Jyg-MC(B) cDNA, RIKEN full-length
            enriched library, clone:G930028P11 product:origin
            recognition complex, subunit 1-like (S.cereviaiae), full
            insert sequence
          Length = 4217

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 48   tgtttgctcccaaagaagagtgaa 71
            ||||||||| ||||||||||||||
Sbjct: 2629 tgtttgctctcaaagaagagtgaa 2652
to top
>dbj|AK161814.1| Mus musculus 13 days embryo male testis cDNA, RIKEN full-length
            enriched library, clone:6030455J24 product:origin
            recognition complex, subunit 1-like (S.cereviaiae), full
            insert sequence
          Length = 2844

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 48   tgtttgctcccaaagaagagtgaa 71
            ||||||||| ||||||||||||||
Sbjct: 2613 tgtttgctctcaaagaagagtgaa 2636
to top
>dbj|AK164035.1| Mus musculus 7 days embryo whole body cDNA, RIKEN full-length
            enriched library, clone:C430022O18 product:origin
            recognition complex, subunit 1-like (S.cereviaiae), full
            insert sequence
          Length = 3009

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 48   tgtttgctcccaaagaagagtgaa 71
            ||||||||| ||||||||||||||
Sbjct: 2635 tgtttgctctcaaagaagagtgaa 2658
to top
>emb|BX664606.17| Zebrafish DNA sequence from clone CH211-171L17 in linkage group 22,
             complete sequence
          Length = 181178

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 84    atctattttccatcattgtt 103
             ||||||||||||||||||||
Sbjct: 88743 atctattttccatcattgtt 88724
to top
>emb|BX649300.4| Zebrafish DNA sequence from clone CH211-195I16 in linkage group 23,
             complete sequence
          Length = 202963

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 88    attttccatcattgttctgc 107
             ||||||||||||||||||||
Sbjct: 58269 attttccatcattgttctgc 58288
to top
>gb|AC008979.8| Homo sapiens chromosome 19 clone LLNLF-152D8, complete sequence
          Length = 39882

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 418   agttgaacatttcttatgat 437
             ||||||||||||||||||||
Sbjct: 23890 agttgaacatttcttatgat 23871
to top
>gb|BC038007.1| Mus musculus origin recognition complex, subunit 1-like
            (S.cereviaiae), mRNA (cDNA clone IMAGE:2609387), partial
            cds
          Length = 2740

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 48   tgtttgctcccaaagaagagtgaa 71
            ||||||||| ||||||||||||||
Sbjct: 2501 tgtttgctctcaaagaagagtgaa 2524
to top
>gb|AC021842.7|AC021842 Homo sapiens chromosome 8, clone RP11-472N16, complete sequence
          Length = 190044

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 485    atagtcttcttgtggcagaa 504
              ||||||||||||||||||||
Sbjct: 161232 atagtcttcttgtggcagaa 161213
to top
>dbj|AK044628.1| Mus musculus adult retina cDNA, RIKEN full-length enriched library,
            clone:A930028E20 product:unclassifiable, full insert
            sequence
          Length = 4547

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 382  atcaggcatgctgacacggc 401
            ||||||||||||||||||||
Sbjct: 2150 atcaggcatgctgacacggc 2131
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>dbj|AK042130.1| Mus musculus 3 days neonate thymus cDNA, RIKEN full-length enriched
            library, clone:A630061H16 product:origin recognition
            complex, subunit 1 homolog (S. cerevisiae), full insert
            sequence
          Length = 2721

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 48   tgtttgctcccaaagaagagtgaa 71
            ||||||||| ||||||||||||||
Sbjct: 2620 tgtttgctctcaaagaagagtgaa 2643
to top
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 330      gcatttccctgtttacagag 349
                ||||||||||||||||||||
Sbjct: 24573447 gcatttccctgtttacagag 24573466
to top
>gb|AC016956.20| Homo sapiens 12 BAC RP11-56H16 (Roswell Park Cancer Institute Human
            BAC Library) complete sequence
          Length = 86970

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 420  ttgaacatttcttatgatac 439
            ||||||||||||||||||||
Sbjct: 9576 ttgaacatttcttatgatac 9595
to top
>gb|AC079080.5| Homo sapiens BAC clone RP11-162O12 from 4, complete sequence
          Length = 161647

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 88     attttccatcattgttctgc 107
              ||||||||||||||||||||
Sbjct: 130514 attttccatcattgttctgc 130533
to top
>gb|AC145543.3| Homo sapiens chromosome UNKNOWN clone RP11-1278L23, complete sequence
          Length = 221027

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 414    cacaagttgaacatttcttatgat 437
              ||||||||||||||||||| ||||
Sbjct: 176266 cacaagttgaacatttcttttgat 176243
to top
>gb|AC010723.3|AC010723 Homo sapiens BAC clone RP11-139C10 from Y, complete sequence
          Length = 174420

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 23     tttgcatcagcttagctagatatc 46
              ||||||||||||||||| ||||||
Sbjct: 149399 tttgcatcagcttagcttgatatc 149376
to top
>gb|AC123577.3| Homo sapiens BAC clone CTD-2415C3 from 7, complete sequence
          Length = 99952

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 418   agttgaacatttcttatgat 437
             ||||||||||||||||||||
Sbjct: 23751 agttgaacatttcttatgat 23770
to top
>gb|AC124008.4| Homo sapiens BAC clone RP11-529E24 from 7, complete sequence
          Length = 166555

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 418    agttgaacatttcttatgat 437
              ||||||||||||||||||||
Sbjct: 126283 agttgaacatttcttatgat 126264



 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 418   agttgaacatttcttatgat 437
             ||||||||||||||||||||
Sbjct: 30221 agttgaacatttcttatgat 30240
to top
>gb|AC131274.9| Homo sapiens chromosome 17, clone RP11-285M22, complete sequence
          Length = 158329

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 418   agttgaacatttcttatgat 437
             ||||||||||||||||||||
Sbjct: 38114 agttgaacatttcttatgat 38095



 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 418   agttgaacatttcttatgat 437
             ||||||||||||||||||||
Sbjct: 37942 agttgaacatttcttatgat 37923
to top
>gb|AC010510.6|AC010510 Homo sapiens chromosome 19 clone LLNLF-191G6, complete sequence
          Length = 42307

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 276   ccctcctcagctcctcgcag 295
             ||||||||||||||||||||
Sbjct: 31960 ccctcctcagctcctcgcag 31979
to top
>emb|BX571951.7| Zebrafish DNA sequence from clone DKEY-5A9 in linkage group 18, complete
              sequence
          Length = 157583

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 152    ccaaagaagaatgtagtaccaaaa 175
              |||||||||||||||| |||||||
Sbjct: 140978 ccaaagaagaatgtagaaccaaaa 140955
to top
>emb|BX649586.4| Zebrafish DNA sequence from clone CH211-1A22 in linkage group 18,
             complete sequence
          Length = 128751

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 152   ccaaagaagaatgtagtaccaaaa 175
             |||||||||||||||| |||||||
Sbjct: 23359 ccaaagaagaatgtagaaccaaaa 23336
to top
>gb|AY105094.1| Zea mays PCO088415 mRNA sequence
          Length = 879

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 97  cattgttctgcatcagcttagcaaggtt 124
           ||||||||||||||||||  ||||||||
Sbjct: 514 cattgttctgcatcagctgggcaaggtt 487
to top
>emb|AL645797.11| Mouse DNA sequence from clone RP23-153J5 on chromosome 11 Contains a
             novel gene and a CpG island, complete sequence
          Length = 190784

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 382   atcaggcatgctgacacggc 401
             ||||||||||||||||||||
Sbjct: 47341 atcaggcatgctgacacggc 47360
to top
>gb|AC150745.2| Mus musculus BAC clone RP24-77E13 from 7, complete sequence
          Length = 232607

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 189    ttcacttgggataatgtcca 208
              ||||||||||||||||||||
Sbjct: 193536 ttcacttgggataatgtcca 193517
to top
>gb|BC015073.1| Mus musculus origin recognition complex, subunit 1-like
            (S.cereviaiae), mRNA (cDNA clone MGC:13780
            IMAGE:3995330), complete cds
          Length = 2747

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 48   tgtttgctcccaaagaagagtgaa 71
            ||||||||| ||||||||||||||
Sbjct: 2560 tgtttgctctcaaagaagagtgaa 2583
to top
>emb|AL929150.12| Zebrafish DNA sequence from clone CH211-196H16 in linkage group 1,
              complete sequence
          Length = 229480

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 92     tccatcattgttctgcatca 111
              ||||||||||||||||||||
Sbjct: 163607 tccatcattgttctgcatca 163588
to top
>emb|BX901958.23| Zebrafish DNA sequence from clone DKEY-3H2 in linkage group 22,
             complete sequence
          Length = 134415

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 84    atctattttccatcattgtt 103
             ||||||||||||||||||||
Sbjct: 36806 atctattttccatcattgtt 36787
to top
>emb|AL929041.10| Zebrafish DNA sequence from clone CH211-197K17 in linkage group 1,
             complete sequence
          Length = 60103

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 92    tccatcattgttctgcatca 111
             ||||||||||||||||||||
Sbjct: 13532 tccatcattgttctgcatca 13513
to top
>emb|AL626783.16| Mouse DNA sequence from clone RP23-406B13 on chromosome 4, complete
              sequence
          Length = 179370

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 48     tgtttgctcccaaagaagagtgaa 71
              ||||||||| ||||||||||||||
Sbjct: 132667 tgtttgctctcaaagaagagtgaa 132690
to top
>emb|AL713885.1|CNS07YP2 Mus musculus chromosome 11 region in the Om locus area (D11Mit37-Scya6)
              clone 330D23 of library Caltech CITB-BAC from chromosome 11
              of Mus musculus (mouse)
          Length = 181075

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 382    atcaggcatgctgacacggc 401
              ||||||||||||||||||||
Sbjct: 144761 atcaggcatgctgacacggc 144742
to top
>emb|AL713884.1|CNS07YP1 Mus musculus chromosome 11 region in the Om locus area (D11Mit37-Scya6)
             clone 205M5 of library Caltech CITB-BAC from chromosome 11
             of Mus musculus (mouse)
          Length = 120637

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 382   atcaggcatgctgacacggc 401
             ||||||||||||||||||||
Sbjct: 84328 atcaggcatgctgacacggc 84309
to top
>emb|AJ003133.1|MMORC1 Mus musculus mRNA for ORC1-related protein, complete cds
          Length = 3017

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 48   tgtttgctcccaaagaagagtgaa 71
            ||||||||| ||||||||||||||
Sbjct: 2624 tgtttgctctcaaagaagagtgaa 2647


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,764,489
Number of Sequences: 3902068
Number of extensions: 5764489
Number of successful extensions: 110223
Number of sequences better than 10.0: 79
Number of HSP's better than 10.0 without gapping: 79
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 109698
Number of HSP's gapped (non-prelim): 525
length of query: 505
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 483
effective length of database: 17,147,199,772
effective search space: 8282097489876
effective search space used: 8282097489876
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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