Clone Information

BLAST Search Result

Clone Name	rbags26k03
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	RL11_MEDSA (P46287) 60S ribosomal protein L11 (L5)	112	5e-25
2	RL112_ARATH (P42794) 60S ribosomal protein L11-2 (L16)	109	2e-24
3	RL111_ARATH (P42795) 60S ribosomal protein L11-1 (L16A)	109	2e-24
4	RL11_ORYSA (O22540) 60S ribosomal protein L11	104	1e-22
5	RL11_CHLRE (P50881) 60S ribosomal protein L11	96	3e-20
6	RL11_DROME (P46222) 60S ribosomal protein L11	92	4e-19
7	RL11_SPOFR (Q962U2) 60S ribosomal protein L11	86	4e-17
8	RL11_RAT (P62914) 60S ribosomal protein L11	86	4e-17
9	RL11_MOUSE (Q9CXW4) 60S ribosomal protein L11	86	4e-17
10	RL11_HUMAN (P62913) 60S ribosomal protein L11 (CLL-associated an...	86	4e-17
11	RL11_CHILA (Q6QMZ8) 60S ribosomal protein L11	86	4e-17
12	RL11_PIG (Q29205) 60S ribosomal protein L11	84	1e-16
13	RL11_CAEEL (Q94300) 60S ribosomal protein L11	83	3e-16
14	RL11_ICTPU (Q90YV7) 60S ribosomal protein L11	82	4e-16
15	RL11_TETTH (P24119) 60S ribosomal protein L11 (L21)	80	2e-15
16	RL11_SCHPO (Q10157) 60S ribosomal protein L11	79	3e-15
17	RL11_LEIMA (P48157) 60S ribosomal protein L11	79	3e-15
18	RL11_LEICH (P42922) 60S ribosomal protein L11	79	3e-15
19	RL11_ENCCU (Q8SSG9) 60S ribosomal protein L11	79	4e-15
20	RL11B_YEAST (Q3E757) 60S ribosomal protein L11-B (L16) (YL16) (3...	75	5e-14
21	RL11A_YEAST (P0C0W9) 60S ribosomal protein L11-A (L16) (YL16) (3...	75	5e-14
22	RL11_ASHGO (Q758S7) 60S ribosomal protein L11	75	6e-14
23	RL11_CANGA (Q6FTK4) 60S ribosomal protein L11	73	2e-13
24	RL5_METMP (Q6LXE0) 50S ribosomal protein L5P	54	1e-07
25	RL5_ARCFU (O28367) 50S ribosomal protein L5P	54	1e-07
26	RL5_METJA (P54040) 50S ribosomal protein L5P	52	8e-07
27	RL5_METVA (P14029) 50S ribosomal protein L5P	49	5e-06
28	RL5_PYRKO (Q5JJG1) 50S ribosomal protein L5P	47	1e-05
29	RL5_NANEQ (Q74N79) 50S ribosomal protein L5P	47	1e-05
30	RL5_METMA (Q8PV37) 50S ribosomal protein L5P	46	3e-05
31	RL5_PYRAE (Q8ZSU7) 50S ribosomal protein L5P	46	4e-05
32	RL5_METAC (Q8TRT4) 50S ribosomal protein L5P	46	4e-05
33	RL5_SULSO (Q9UX93) 50S ribosomal protein L5P	46	4e-05
34	RL5_METTH (O26124) 50S ribosomal protein L5P	44	1e-04
35	RL5_PYRHO (O59431) 50S ribosomal protein L5P	44	2e-04
36	RL5_PYRFU (Q8U012) 50S ribosomal protein L5P	44	2e-04
37	RL5_PYRAB (Q9V1U9) 50S ribosomal protein L5P	43	3e-04
38	RL5_METKA (Q8TW17) 50S ribosomal protein L5P	42	6e-04
39	RL5_SULAC (P41202) 50S ribosomal protein L5P	42	6e-04
40	RL5_HALMA (P14124) 50S ribosomal protein L5P (Hmal5) (Hl13)	41	0.001
41	RL5_HALSA (P50558) 50S ribosomal protein L5P (HSal5) (HHal5) (HC...	40	0.002
42	RL5_SULTO (Q975J3) 50S ribosomal protein L5P	38	0.009
43	RL5_THEVO (Q97BW3) 50S ribosomal protein L5P	38	0.009
44	RL5_THEAC (Q56231) 50S ribosomal protein L5P	37	0.015
45	RL5_AERPE (Q9YF87) 50S ribosomal protein L5P	37	0.025
46	RL11_TOXCA (Q94793) 60S ribosomal protein L11 (Fragment)	33	0.37
47	SPRR1_PIG (P35323) Cornifin (Small proline-rich protein I) (SPR-...	30	1.8
48	BAT2_HUMAN (P48634) Large proline-rich protein BAT2 (HLA-B-assoc...	30	3.1
49	BAT2_MACMU (Q5TM26) Large proline-rich protein BAT2 (HLA-B-assoc...	30	3.1
50	SPR1B_HUMAN (P22528) Cornifin B (Small proline-rich protein IB) ...	30	3.1
51	SYE_AGRT5 (Q8U7H5) Glutamyl-tRNA synthetase (EC 6.1.1.17) (Gluta...	29	5.3
52	RL5_WOLPM (Q73H98) 50S ribosomal protein L5	28	6.9
53	ZN207_HUMAN (O43670) Zinc finger protein 207	28	6.9
54	SPRR1_MACMU (P35322) Cornifin (Small proline-rich protein I) (SP...	28	9.0
55	AGO2_DROME (Q9VUQ5) Argonaute 2 protein	28	9.0
56	SPR1A_MOUSE (Q62266) Cornifin A (Small proline-rich protein 1A) ...	28	9.0
57	OPSD_TODPA (P31356) Rhodopsin	28	9.0

>RL11_MEDSA (P46287) 60S ribosomal protein L11 (L5)|
          Length = 181

 Score =  112 bits (279), Expect = 5e-25
 Identities = 56/79 (70%), Positives = 58/79 (73%)
 Frame = -1

Query: 427 TGCFGFGIQEHIDLGMKYDPSXGIYGMDXFVVLEXXXXXXXXXXXXXXXXGIHQRVTKED 248
           TGCFGFGIQEHIDLG+KYDPS GIYGMD FVVLE                GI  RVTK+D
Sbjct: 101 TGCFGFGIQEHIDLGIKYDPSTGIYGMDFFVVLERPGYRVGRRRRCKARVGIQHRVTKDD 160

Query: 247 AMKWFQVKYEGVILNKSHA 191
           AMKWFQVKYEGVILNKS A
Sbjct: 161 AMKWFQVKYEGVILNKSQA 179

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>RL112_ARATH (P42794) 60S ribosomal protein L11-2 (L16)|
          Length = 182

 Score =  109 bits (273), Expect = 2e-24
 Identities = 54/77 (70%), Positives = 57/77 (74%)
 Frame = -1

Query: 427 TGCFGFGIQEHIDLGMKYDPSXGIYGMDXFVVLEXXXXXXXXXXXXXXXXGIHQRVTKED 248
           TGCFGFGIQEHIDLG+KYDPS GIYGMD +VVLE                GI  RVTK+D
Sbjct: 101 TGCFGFGIQEHIDLGIKYDPSTGIYGMDFYVVLERPGYRVARRRRCKTRVGIQHRVTKDD 160

Query: 247 AMKWFQVKYEGVILNKS 197
           AMKWFQVKYEGVILNKS
Sbjct: 161 AMKWFQVKYEGVILNKS 177

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>RL111_ARATH (P42795) 60S ribosomal protein L11-1 (L16A)|
          Length = 182

 Score =  109 bits (273), Expect = 2e-24
 Identities = 54/77 (70%), Positives = 57/77 (74%)
 Frame = -1

Query: 427 TGCFGFGIQEHIDLGMKYDPSXGIYGMDXFVVLEXXXXXXXXXXXXXXXXGIHQRVTKED 248
           TGCFGFGIQEHIDLG+KYDPS GIYGMD +VVLE                GI  RVTK+D
Sbjct: 101 TGCFGFGIQEHIDLGIKYDPSTGIYGMDFYVVLERPGYRVARRRRCKARVGIQHRVTKDD 160

Query: 247 AMKWFQVKYEGVILNKS 197
           AMKWFQVKYEGVILNKS
Sbjct: 161 AMKWFQVKYEGVILNKS 177

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>RL11_ORYSA (O22540) 60S ribosomal protein L11|
          Length = 182

 Score =  104 bits (259), Expect = 1e-22
 Identities = 51/80 (63%), Positives = 56/80 (70%)
 Frame = -1

Query: 427 TGCFGFGIQEHIDLGMKYDPSXGIYGMDXFVVLEXXXXXXXXXXXXXXXXGIHQRVTKED 248
           TGCFGFGIQEHIDLG++ DPS G YGMD +VVLE                GI  RVTKED
Sbjct: 101 TGCFGFGIQEHIDLGIQCDPSTGFYGMDFYVVLERAGYRVARRRRCKSRVGIQHRVTKED 160

Query: 247 AMKWFQVKYEGVILNKSHAS 188
           AMKWFQVKYEGVI NK+ A+
Sbjct: 161 AMKWFQVKYEGVIFNKAQAN 180

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>RL11_CHLRE (P50881) 60S ribosomal protein L11|
          Length = 170

 Score = 96.3 bits (238), Expect = 3e-20
 Identities = 46/80 (57%), Positives = 56/80 (70%)
 Frame = -1

Query: 427 TGCFGFGIQEHIDLGMKYDPSXGIYGMDXFVVLEXXXXXXXXXXXXXXXXGIHQRVTKED 248
           TG FGFGIQEHIDLG+KYDPS GIYGMD +V LE                G+  +VTKED
Sbjct: 91  TGNFGFGIQEHIDLGLKYDPSTGIYGMDFYVCLERRGYRVARRRKQKAHVGVKHKVTKED 150

Query: 247 AMKWFQVKYEGVILNKSHAS 188
           A+KWFQ +++GV+LNK+ AS
Sbjct: 151 AIKWFQQEFDGVVLNKAPAS 170

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>RL11_DROME (P46222) 60S ribosomal protein L11|
          Length = 184

 Score = 92.4 bits (228), Expect = 4e-19
 Identities = 45/75 (60%), Positives = 51/75 (68%)
 Frame = -1

Query: 427 TGCFGFGIQEHIDLGMKYDPSXGIYGMDXFVVLEXXXXXXXXXXXXXXXXGIHQRVTKED 248
           TG FGFGIQEHIDLG+KYDPS GIYG+D +VVL                 G   R+TKED
Sbjct: 107 TGNFGFGIQEHIDLGIKYDPSIGIYGLDFYVVLGRPGYNVNHRKRKSGTVGFQHRLTKED 166

Query: 247 AMKWFQVKYEGVILN 203
           AMKWFQ KY+G+ILN
Sbjct: 167 AMKWFQQKYDGIILN 181

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>RL11_SPOFR (Q962U2) 60S ribosomal protein L11|
          Length = 195

 Score = 85.9 bits (211), Expect = 4e-17
 Identities = 45/76 (59%), Positives = 50/76 (65%), Gaps = 1/76 (1%)
 Frame = -1

Query: 427 TGCFGFGIQEHIDLGMKYDPSXGIYGMDXFVVLEXXXXXXXXXXXXXXXXGIHQRV-TKE 251
           TG FGFGIQEHIDLG+KYDPS GIYG+D +VVL                  I   V TKE
Sbjct: 117 TGNFGFGIQEHIDLGIKYDPSIGIYGLDFYVVLGPTRIQCTTQKTQDWQGWIPPIVLTKE 176

Query: 250 DAMKWFQVKYEGVILN 203
           DAMKWFQ KY+G+ILN
Sbjct: 177 DAMKWFQQKYDGIILN 192

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>RL11_RAT (P62914) 60S ribosomal protein L11|
          Length = 177

 Score = 85.9 bits (211), Expect = 4e-17
 Identities = 41/74 (55%), Positives = 50/74 (67%)
 Frame = -1

Query: 427 TGCFGFGIQEHIDLGMKYDPSXGIYGMDXFVVLEXXXXXXXXXXXXXXXXGIHQRVTKED 248
           TG FGFGIQEHIDLG+KYDPS GIYG+D +VVL                 G   R++KE+
Sbjct: 101 TGNFGFGIQEHIDLGIKYDPSIGIYGLDFYVVLGRPGFSIADKKRRTGCIGAKHRISKEE 160

Query: 247 AMKWFQVKYEGVIL 206
           AM+WFQ KY+G+IL
Sbjct: 161 AMRWFQQKYDGIIL 174

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>RL11_MOUSE (Q9CXW4) 60S ribosomal protein L11|
          Length = 177

 Score = 85.9 bits (211), Expect = 4e-17
 Identities = 41/74 (55%), Positives = 50/74 (67%)
 Frame = -1

Query: 427 TGCFGFGIQEHIDLGMKYDPSXGIYGMDXFVVLEXXXXXXXXXXXXXXXXGIHQRVTKED 248
           TG FGFGIQEHIDLG+KYDPS GIYG+D +VVL                 G   R++KE+
Sbjct: 101 TGNFGFGIQEHIDLGIKYDPSIGIYGLDFYVVLGRPGFSIADKKRRTGCIGAKHRISKEE 160

Query: 247 AMKWFQVKYEGVIL 206
           AM+WFQ KY+G+IL
Sbjct: 161 AMRWFQQKYDGIIL 174

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>RL11_HUMAN (P62913) 60S ribosomal protein L11 (CLL-associated antigen KW-12)|
          Length = 177

 Score = 85.9 bits (211), Expect = 4e-17
 Identities = 41/74 (55%), Positives = 50/74 (67%)
 Frame = -1

Query: 427 TGCFGFGIQEHIDLGMKYDPSXGIYGMDXFVVLEXXXXXXXXXXXXXXXXGIHQRVTKED 248
           TG FGFGIQEHIDLG+KYDPS GIYG+D +VVL                 G   R++KE+
Sbjct: 101 TGNFGFGIQEHIDLGIKYDPSIGIYGLDFYVVLGRPGFSIADKKRRTGCIGAKHRISKEE 160

Query: 247 AMKWFQVKYEGVIL 206
           AM+WFQ KY+G+IL
Sbjct: 161 AMRWFQQKYDGIIL 174

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>RL11_CHILA (Q6QMZ8) 60S ribosomal protein L11|
          Length = 177

 Score = 85.9 bits (211), Expect = 4e-17
 Identities = 41/74 (55%), Positives = 50/74 (67%)
 Frame = -1

Query: 427 TGCFGFGIQEHIDLGMKYDPSXGIYGMDXFVVLEXXXXXXXXXXXXXXXXGIHQRVTKED 248
           TG FGFGIQEHIDLG+KYDPS GIYG+D +VVL                 G   R++KE+
Sbjct: 101 TGNFGFGIQEHIDLGIKYDPSIGIYGLDFYVVLGRPGFSIADKKRRTGCIGAKHRISKEE 160

Query: 247 AMKWFQVKYEGVIL 206
           AM+WFQ KY+G+IL
Sbjct: 161 AMRWFQQKYDGIIL 174

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>RL11_PIG (Q29205) 60S ribosomal protein L11|
          Length = 177

 Score = 84.0 bits (206), Expect = 1e-16
 Identities = 40/74 (54%), Positives = 50/74 (67%)
 Frame = -1

Query: 427 TGCFGFGIQEHIDLGMKYDPSXGIYGMDXFVVLEXXXXXXXXXXXXXXXXGIHQRVTKED 248
           TG FGFGIQEHIDLG+KYDPS GIYG+D +VVL                 G   R++KE+
Sbjct: 101 TGNFGFGIQEHIDLGIKYDPSIGIYGLDFYVVLGRPGFSIADKKRRTGCIGAKHRISKEE 160

Query: 247 AMKWFQVKYEGVIL 206
           AM+WFQ K++G+IL
Sbjct: 161 AMRWFQQKHDGIIL 174

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>RL11_CAEEL (Q94300) 60S ribosomal protein L11|
          Length = 196

 Score = 82.8 bits (203), Expect = 3e-16
 Identities = 40/74 (54%), Positives = 47/74 (63%)
 Frame = -1

Query: 427 TGCFGFGIQEHIDLGMKYDPSXGIYGMDXFVVLEXXXXXXXXXXXXXXXXGIHQRVTKED 248
           TG FGFG+QEHIDLG+KYDP  GIYGMD +VVL                 G   RV KE+
Sbjct: 109 TGNFGFGVQEHIDLGIKYDPGIGIYGMDFYVVLNRNGVRVSKRRRAPGRIGPSHRVDKEE 168

Query: 247 AMKWFQVKYEGVIL 206
            +KWFQ KY+G+IL
Sbjct: 169 TIKWFQQKYDGIIL 182

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>RL11_ICTPU (Q90YV7) 60S ribosomal protein L11|
          Length = 177

 Score = 82.4 bits (202), Expect = 4e-16
 Identities = 40/74 (54%), Positives = 48/74 (64%)
 Frame = -1

Query: 427 TGCFGFGIQEHIDLGMKYDPSXGIYGMDXFVVLEXXXXXXXXXXXXXXXXGIHQRVTKED 248
           +G FGFGIQEHIDLG+KYDPS GIYG+D +VVL                 G   R+ K +
Sbjct: 101 SGNFGFGIQEHIDLGIKYDPSIGIYGLDFYVVLGRPGFSIADKKRKRGRIGFKHRIRKRE 160

Query: 247 AMKWFQVKYEGVIL 206
           AM+WFQ KY+GVIL
Sbjct: 161 AMRWFQQKYDGVIL 174

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>RL11_TETTH (P24119) 60S ribosomal protein L11 (L21)|
          Length = 172

 Score = 80.1 bits (196), Expect = 2e-15
 Identities = 37/71 (52%), Positives = 47/71 (66%)
 Frame = -1

Query: 427 TGCFGFGIQEHIDLGMKYDPSXGIYGMDXFVVLEXXXXXXXXXXXXXXXXGIHQRVTKED 248
           TG FGFGIQEHIDLGMKYDPS GI+GMD +VVLE                G +Q ++KE+
Sbjct: 99  TGNFGFGIQEHIDLGMKYDPSTGIFGMDFYVVLERPGTRVARRRRATSRVGNNQMISKEE 158

Query: 247 AMKWFQVKYEG 215
            + WF+ ++EG
Sbjct: 159 CINWFKTEFEG 169

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>RL11_SCHPO (Q10157) 60S ribosomal protein L11|
          Length = 174

 Score = 79.3 bits (194), Expect = 3e-15
 Identities = 37/76 (48%), Positives = 47/76 (61%)
 Frame = -1

Query: 427 TGCFGFGIQEHIDLGMKYDPSXGIYGMDXFVVLEXXXXXXXXXXXXXXXXGIHQRVTKED 248
           TG FGFGIQEHIDLG+KYDPS GIYGMD +VV++                G   ++  ED
Sbjct: 99  TGNFGFGIQEHIDLGIKYDPSIGIYGMDFYVVMDRPGMRVARRKAQRGRVGYTHKINAED 158

Query: 247 AMKWFQVKYEGVILNK 200
            + WF+ KY+ V+L K
Sbjct: 159 TINWFKQKYDAVVLGK 174

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>RL11_LEIMA (P48157) 60S ribosomal protein L11|
          Length = 188

 Score = 79.3 bits (194), Expect = 3e-15
 Identities = 39/73 (53%), Positives = 46/73 (63%)
 Frame = -1

Query: 427 TGCFGFGIQEHIDLGMKYDPSXGIYGMDXFVVLEXXXXXXXXXXXXXXXXGIHQRVTKED 248
           TG FGFGI EHIDLG+KYDPS GIYGMD +VVL                 G    VTKE+
Sbjct: 101 TGSFGFGIDEHIDLGIKYDPSTGIYGMDFYVVLGRRGERVAHRKRKCSRVGHSHHVTKEE 160

Query: 247 AMKWFQVKYEGVI 209
           AMKWF+  ++G+I
Sbjct: 161 AMKWFEKVHDGII 173

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>RL11_LEICH (P42922) 60S ribosomal protein L11|
          Length = 188

 Score = 79.3 bits (194), Expect = 3e-15
 Identities = 39/73 (53%), Positives = 46/73 (63%)
 Frame = -1

Query: 427 TGCFGFGIQEHIDLGMKYDPSXGIYGMDXFVVLEXXXXXXXXXXXXXXXXGIHQRVTKED 248
           TG FGFGI EHIDLG+KYDPS GIYGMD +VVL                 G    VTKE+
Sbjct: 101 TGSFGFGIDEHIDLGIKYDPSTGIYGMDFYVVLGRRGERVAHRKRKCSRVGHSHHVTKEE 160

Query: 247 AMKWFQVKYEGVI 209
           AMKWF+  ++G+I
Sbjct: 161 AMKWFEKVHDGII 173

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>RL11_ENCCU (Q8SSG9) 60S ribosomal protein L11|
          Length = 165

 Score = 79.0 bits (193), Expect = 4e-15
 Identities = 38/73 (52%), Positives = 46/73 (63%)
 Frame = -1

Query: 424 GCFGFGIQEHIDLGMKYDPSXGIYGMDXFVVLEXXXXXXXXXXXXXXXXGIHQRVTKEDA 245
           GCFGFGI+EHIDLG+KYDP+ GI+GMD FV+L                 G  QRV  EDA
Sbjct: 92  GCFGFGIEEHIDLGLKYDPNIGIFGMDFFVILARPGDRVSKRKRCKSRVGNKQRVYAEDA 151

Query: 244 MKWFQVKYEGVIL 206
            KWF   +EGV++
Sbjct: 152 KKWFVENFEGVLV 164

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>RL11B_YEAST (Q3E757) 60S ribosomal protein L11-B (L16) (YL16) (39B) (RP39)|
          Length = 173

 Score = 75.5 bits (184), Expect = 5e-14
 Identities = 36/76 (47%), Positives = 46/76 (60%)
 Frame = -1

Query: 427 TGCFGFGIQEHIDLGMKYDPSXGIYGMDXFVVLEXXXXXXXXXXXXXXXXGIHQRVTKED 248
           TG FGFGI EHIDLG+KYDPS GI+GMD +VV+                 G   + TKED
Sbjct: 98  TGNFGFGIDEHIDLGIKYDPSIGIFGMDFYVVMNRPGARVTRRKRCKGTVGNSHKTTKED 157

Query: 247 AMKWFQVKYEGVILNK 200
            + WF+ KY+  +L+K
Sbjct: 158 TVSWFKQKYDADVLDK 173

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>RL11A_YEAST (P0C0W9) 60S ribosomal protein L11-A (L16) (YL16) (39A) (RP39)|
          Length = 173

 Score = 75.5 bits (184), Expect = 5e-14
 Identities = 36/76 (47%), Positives = 46/76 (60%)
 Frame = -1

Query: 427 TGCFGFGIQEHIDLGMKYDPSXGIYGMDXFVVLEXXXXXXXXXXXXXXXXGIHQRVTKED 248
           TG FGFGI EHIDLG+KYDPS GI+GMD +VV+                 G   + TKED
Sbjct: 98  TGNFGFGIDEHIDLGIKYDPSIGIFGMDFYVVMNRPGARVTRRKRCKGTVGNSHKTTKED 157

Query: 247 AMKWFQVKYEGVILNK 200
            + WF+ KY+  +L+K
Sbjct: 158 TVSWFKQKYDADVLDK 173

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>RL11_ASHGO (Q758S7) 60S ribosomal protein L11|
          Length = 174

 Score = 75.1 bits (183), Expect = 6e-14
 Identities = 36/76 (47%), Positives = 47/76 (61%)
 Frame = -1

Query: 427 TGCFGFGIQEHIDLGMKYDPSXGIYGMDXFVVLEXXXXXXXXXXXXXXXXGIHQRVTKED 248
           TG FGFGIQEHIDLG+KYDPS GIYGMD +VV+                 G   + +KED
Sbjct: 99  TGNFGFGIQEHIDLGIKYDPSIGIYGMDFYVVMGRPGGRVSRRKRCRSTVGNSHKTSKED 158

Query: 247 AMKWFQVKYEGVILNK 200
            + WF+ +Y+  +L+K
Sbjct: 159 TIAWFKQRYDADVLDK 174

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>RL11_CANGA (Q6FTK4) 60S ribosomal protein L11|
          Length = 174

 Score = 73.2 bits (178), Expect = 2e-13
 Identities = 34/76 (44%), Positives = 47/76 (61%)
 Frame = -1

Query: 427 TGCFGFGIQEHIDLGMKYDPSXGIYGMDXFVVLEXXXXXXXXXXXXXXXXGIHQRVTKED 248
           TG FGFGIQEHIDLG+KYDPS GI+GMD ++V+                 G   + +KED
Sbjct: 99  TGNFGFGIQEHIDLGIKYDPSIGIFGMDFYIVMGRPGNRIARRKRCRATVGNSHKTSKED 158

Query: 247 AMKWFQVKYEGVILNK 200
            + WF+ +Y+  +L+K
Sbjct: 159 TIAWFKQRYDADVLDK 174

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>RL5_METMP (Q6LXE0) 50S ribosomal protein L5P|
          Length = 181

 Score = 54.3 bits (129), Expect = 1e-07
 Identities = 28/76 (36%), Positives = 39/76 (51%), Gaps = 1/76 (1%)
 Frame = -1

Query: 424 GCFGFGIQEHIDL-GMKYDPSXGIYGMDXFVVLEXXXXXXXXXXXXXXXXGIHQRVTKED 248
           G F FG+ EHID  G KYDPS GIYGMD  V  E                     VTK++
Sbjct: 106 GNFSFGVPEHIDFPGQKYDPSVGIYGMDICVTFEKSGYRVKSRKVKRSHIPEKHLVTKDE 165

Query: 247 AMKWFQVKYEGVILNK 200
           A+++ Q K++  ++ +
Sbjct: 166 AIEYIQAKFDTEVVRE 181

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>RL5_ARCFU (O28367) 50S ribosomal protein L5P|
          Length = 178

 Score = 54.3 bits (129), Expect = 1e-07
 Identities = 28/66 (42%), Positives = 34/66 (51%), Gaps = 1/66 (1%)
 Frame = -1

Query: 424 GCFGFGIQEHIDL-GMKYDPSXGIYGMDXFVVLEXXXXXXXXXXXXXXXXGIHQRVTKED 248
           G F FGI EHIDL G+ YDP  GI+GMD  V L+                    RVTKED
Sbjct: 106 GYFAFGIAEHIDLPGVDYDPDVGIFGMDVCVSLKRRGYRVARRRRKKAKIATSHRVTKED 165

Query: 247 AMKWFQ 230
            ++W +
Sbjct: 166 TIRWLE 171

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>RL5_METJA (P54040) 50S ribosomal protein L5P|
          Length = 190

 Score = 51.6 bits (122), Expect = 8e-07
 Identities = 33/80 (41%), Positives = 40/80 (50%), Gaps = 5/80 (6%)
 Frame = -1

Query: 424 GCFGFGIQEHIDL-GMKYDPSXGIYGMDXFVVLEXXXXXXXXXXXXXXXXGIHQRVTKED 248
           G F FGI EHID  G KYDP  GI+GMD  V LE                    R+T+E+
Sbjct: 106 GNFSFGIHEHIDFPGQKYDPMIGIFGMDVCVTLERPGFRVKRRKRCRAKIPRRHRLTREE 165

Query: 247 AM----KWFQVKYEGVILNK 200
           A+    K F VK E V+L +
Sbjct: 166 AIEFIEKTFGVKVERVLLEE 185

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>RL5_METVA (P14029) 50S ribosomal protein L5P|
          Length = 181

 Score = 48.9 bits (115), Expect = 5e-06
 Identities = 26/69 (37%), Positives = 34/69 (49%), Gaps = 1/69 (1%)
 Frame = -1

Query: 424 GCFGFGIQEHIDL-GMKYDPSXGIYGMDXFVVLEXXXXXXXXXXXXXXXXGIHQRVTKED 248
           G F FG+ EHID  G KYDP+ GIYGMD  V  E                     V KE+
Sbjct: 106 GNFSFGVPEHIDFPGQKYDPTVGIYGMDICVTFEKPGYRVKSRKLKRSHIPAKHLVKKEE 165

Query: 247 AMKWFQVKY 221
           A+++ + K+
Sbjct: 166 AIEYIEKKF 174

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>RL5_PYRKO (Q5JJG1) 50S ribosomal protein L5P|
          Length = 183

 Score = 47.4 bits (111), Expect = 1e-05
 Identities = 29/76 (38%), Positives = 40/76 (52%), Gaps = 5/76 (6%)
 Frame = -1

Query: 424 GCFGFGIQEHIDL-GMKYDPSXGIYGMDXFVVLEXXXXXXXXXXXXXXXXGIHQRVTKED 248
           G F FGIQEHI++ G++YDP  GI+GMD  V LE                    ++TKE+
Sbjct: 108 GNFCFGIQEHINIPGVEYDPEIGIFGMDVCVTLERPGFRVAKRKRQRRKIPTKHKLTKEE 167

Query: 247 ----AMKWFQVKYEGV 212
               AM+  + K EG+
Sbjct: 168 GIVFAMEELKAKVEGL 183

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>RL5_NANEQ (Q74N79) 50S ribosomal protein L5P|
          Length = 169

 Score = 47.4 bits (111), Expect = 1e-05
 Identities = 25/64 (39%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
 Frame = -1

Query: 418 FGFGIQEHIDL-GMKYDPSXGIYGMDXFVVLEXXXXXXXXXXXXXXXXGIHQRVTKEDAM 242
           FGFGI E+I + GMKYDP  G+ G++ +V LE                G   R+ KE+ +
Sbjct: 98  FGFGIPEYIMIPGMKYDPELGLIGLEAYVTLERPGYRVERRRIKRSKVGSRHRLNKEEII 157

Query: 241 KWFQ 230
           KW Q
Sbjct: 158 KWAQ 161

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>RL5_METMA (Q8PV37) 50S ribosomal protein L5P|
          Length = 169

 Score = 46.2 bits (108), Expect = 3e-05
 Identities = 25/69 (36%), Positives = 34/69 (49%), Gaps = 1/69 (1%)
 Frame = -1

Query: 424 GCFGFGIQEHIDL-GMKYDPSXGIYGMDXFVVLEXXXXXXXXXXXXXXXXGIHQRVTKED 248
           G   FGI+EH D  GM+YDP+ G++GMD  VVL+                    RVT +D
Sbjct: 96  GNVSFGIEEHTDFPGMRYDPNIGVFGMDVTVVLKRPGERICKRRIATRKIPTDHRVTVDD 155

Query: 247 AMKWFQVKY 221
           A+ +    Y
Sbjct: 156 AIAFLNESY 164

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>RL5_PYRAE (Q8ZSU7) 50S ribosomal protein L5P|
          Length = 179

 Score = 45.8 bits (107), Expect = 4e-05
 Identities = 28/62 (45%), Positives = 36/62 (58%), Gaps = 1/62 (1%)
 Frame = -1

Query: 412 FGIQEHIDL-GMKYDPSXGIYGMDXFVVLEXXXXXXXXXXXXXXXXGIHQRVTKEDAMKW 236
           FGI+EHI L G+KYDP+ GI+GMD  V L                 G  Q VTKE+A+++
Sbjct: 110 FGIKEHILLPGVKYDPAVGIWGMDVCVKLAKPGLRVQLRRRRRSKVGKRQLVTKEEAIEF 169

Query: 235 FQ 230
           FQ
Sbjct: 170 FQ 171

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>RL5_METAC (Q8TRT4) 50S ribosomal protein L5P|
          Length = 165

 Score = 45.8 bits (107), Expect = 4e-05
 Identities = 25/69 (36%), Positives = 34/69 (49%), Gaps = 1/69 (1%)
 Frame = -1

Query: 424 GCFGFGIQEHIDL-GMKYDPSXGIYGMDXFVVLEXXXXXXXXXXXXXXXXGIHQRVTKED 248
           G   FGI+EH D  GM+YDP+ G++GMD  VVL+                    RVT +D
Sbjct: 92  GNVSFGIEEHTDFPGMRYDPNIGVFGMDVTVVLKRPGERICKRRIAARKIPAGHRVTVDD 151

Query: 247 AMKWFQVKY 221
           A+ +    Y
Sbjct: 152 AIAFLNESY 160

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>RL5_SULSO (Q9UX93) 50S ribosomal protein L5P|
          Length = 182

 Score = 45.8 bits (107), Expect = 4e-05
 Identities = 25/66 (37%), Positives = 33/66 (50%), Gaps = 1/66 (1%)
 Frame = -1

Query: 424 GCFGFGIQEHIDL-GMKYDPSXGIYGMDXFVVLEXXXXXXXXXXXXXXXXGIHQRVTKED 248
           G   FGI EH+ L G +YDP  GI+GMD  + LE                    RVTKE+
Sbjct: 107 GNVSFGIAEHVILPGARYDPEIGIFGMDIAITLERAGYRISRRRRKKAKIPKRHRVTKEE 166

Query: 247 AMKWFQ 230
           AM++ +
Sbjct: 167 AMEFLR 172

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>RL5_METTH (O26124) 50S ribosomal protein L5P|
          Length = 168

 Score = 44.3 bits (103), Expect = 1e-04
 Identities = 24/70 (34%), Positives = 36/70 (51%), Gaps = 1/70 (1%)
 Frame = -1

Query: 424 GCFGFGIQEHIDL-GMKYDPSXGIYGMDXFVVLEXXXXXXXXXXXXXXXXGIHQRVTKED 248
           G    GI EHID+ GMKYDP  GI+GM+  V  E                    RV++E+
Sbjct: 95  GNVSMGIDEHIDIPGMKYDPEIGIFGMNLSVTFEKPGHRINRRRIQRRKVPQKHRVSREE 154

Query: 247 AMKWFQVKYE 218
           A+++ + K++
Sbjct: 155 AIEFMKEKFQ 164

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>RL5_PYRHO (O59431) 50S ribosomal protein L5P|
          Length = 188

 Score = 43.9 bits (102), Expect = 2e-04
 Identities = 22/65 (33%), Positives = 34/65 (52%), Gaps = 1/65 (1%)
 Frame = -1

Query: 412 FGIQEHIDL-GMKYDPSXGIYGMDXFVVLEXXXXXXXXXXXXXXXXGIHQRVTKEDAMKW 236
           FGI+EHI++ G++YDP  GI+GMD  V LE                    ++TKE+ M +
Sbjct: 115 FGIEEHINIPGVEYDPEIGIFGMDVCVTLERPGFRVARRKRKRARIPTRHKLTKEEGMLY 174

Query: 235 FQVKY 221
              ++
Sbjct: 175 MMEEF 179

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>RL5_PYRFU (Q8U012) 50S ribosomal protein L5P|
          Length = 186

 Score = 43.9 bits (102), Expect = 2e-04
 Identities = 22/65 (33%), Positives = 34/65 (52%), Gaps = 1/65 (1%)
 Frame = -1

Query: 412 FGIQEHIDL-GMKYDPSXGIYGMDXFVVLEXXXXXXXXXXXXXXXXGIHQRVTKEDAMKW 236
           FGI+EHI++ G++YDP  GI+GMD  V LE                    ++TKE+ M +
Sbjct: 115 FGIEEHINIPGVEYDPEIGIFGMDVCVTLERPGFRVARRKRKRAKIPTRHKLTKEEGMVY 174

Query: 235 FQVKY 221
              ++
Sbjct: 175 MMEEF 179

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>RL5_PYRAB (Q9V1U9) 50S ribosomal protein L5P|
          Length = 188

 Score = 43.1 bits (100), Expect = 3e-04
 Identities = 22/65 (33%), Positives = 33/65 (50%), Gaps = 1/65 (1%)
 Frame = -1

Query: 412 FGIQEHIDL-GMKYDPSXGIYGMDXFVVLEXXXXXXXXXXXXXXXXGIHQRVTKEDAMKW 236
           FGI EHI++ G++YDP  GI+GMD  V LE                    ++TKE+ M +
Sbjct: 115 FGIDEHINIPGVEYDPEIGIFGMDVCVTLERPGFRVARRKRKRAKIPTRHKLTKEEGMVY 174

Query: 235 FQVKY 221
              ++
Sbjct: 175 MMEEF 179

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>RL5_METKA (Q8TW17) 50S ribosomal protein L5P|
          Length = 186

 Score = 42.0 bits (97), Expect = 6e-04
 Identities = 23/70 (32%), Positives = 37/70 (52%), Gaps = 1/70 (1%)
 Frame = -1

Query: 412 FGIQEHIDL-GMKYDPSXGIYGMDXFVVLEXXXXXXXXXXXXXXXXGIHQRVTKEDAMKW 236
           FG++EHI L G++YDP  GI+GMD  V LE                    R+TKE+ + +
Sbjct: 116 FGLEEHIALEGVEYDPEIGIFGMDIAVTLERPGFRVMRRRRCRRPVPRRHRLTKEEGIVF 175

Query: 235 FQVKYEGVIL 206
            + +++  +L
Sbjct: 176 MEEEFDVEVL 185

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>RL5_SULAC (P41202) 50S ribosomal protein L5P|
          Length = 178

 Score = 42.0 bits (97), Expect = 6e-04
 Identities = 24/74 (32%), Positives = 34/74 (45%), Gaps = 1/74 (1%)
 Frame = -1

Query: 424 GCFGFGIQEHIDL-GMKYDPSXGIYGMDXFVVLEXXXXXXXXXXXXXXXXGIHQRVTKED 248
           G   FGI EH+ + G +YDP  GI+GMD  + L                     RVTKE+
Sbjct: 103 GNVSFGIAEHVLIPGTRYDPEIGIFGMDVAITLVRPGYRTMKRKRKKASIPRRHRVTKEE 162

Query: 247 AMKWFQVKYEGVIL 206
           A+ + +  +   IL
Sbjct: 163 AINFMKENFNVTIL 176

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>RL5_HALMA (P14124) 50S ribosomal protein L5P (Hmal5) (Hl13)|
          Length = 176

 Score = 40.8 bits (94), Expect = 0.001
 Identities = 22/71 (30%), Positives = 32/71 (45%), Gaps = 1/71 (1%)
 Frame = -1

Query: 427 TGCFGFGIQEHIDL-GMKYDPSXGIYGMDXFVVLEXXXXXXXXXXXXXXXXGIHQRVTKE 251
           TG F FG++EH +    +YDPS GIYG+D  V L                     R+   
Sbjct: 101 TGNFSFGVEEHTEFPSQEYDPSIGIYGLDVTVNLVRPGYRVAKRDKASRSIPTKHRLNPA 160

Query: 250 DAMKWFQVKYE 218
           DA+ + +  Y+
Sbjct: 161 DAVAFIESTYD 171

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>RL5_HALSA (P50558) 50S ribosomal protein L5P (HSal5) (HHal5) (HCul5) (HL19)|
          Length = 174

 Score = 40.4 bits (93), Expect = 0.002
 Identities = 23/71 (32%), Positives = 32/71 (45%), Gaps = 1/71 (1%)
 Frame = -1

Query: 427 TGCFGFGIQEHIDL-GMKYDPSXGIYGMDXFVVLEXXXXXXXXXXXXXXXXGIHQRVTKE 251
           TG   FGI+EH D    +YDP+ GIYGMD  V L                   + R+  E
Sbjct: 99  TGNVSFGIEEHTDFPSQEYDPNIGIYGMDVTVNLTRPGYRVAKRDQGTRQIPSNHRLNSE 158

Query: 250 DAMKWFQVKYE 218
           DA+ +    ++
Sbjct: 159 DAVSFLVSNFD 169

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>RL5_SULTO (Q975J3) 50S ribosomal protein L5P|
          Length = 178

 Score = 38.1 bits (87), Expect = 0.009
 Identities = 23/75 (30%), Positives = 36/75 (48%), Gaps = 2/75 (2%)
 Frame = -1

Query: 424 GCFGFGIQEHIDL-GMKYDPSXGIYGMDXFVVL-EXXXXXXXXXXXXXXXXGIHQRVTKE 251
           G   FGI EH+ + G +YDP  GI+GMD  + L                    H+ V+KE
Sbjct: 102 GNVSFGIAEHVLIPGTRYDPEIGIFGMDVAITLVRPGFRVARRRRKKAHIPKRHRTVSKE 161

Query: 250 DAMKWFQVKYEGVIL 206
           +AM++ +  +   I+
Sbjct: 162 EAMEFLKQNFNVTIV 176

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>RL5_THEVO (Q97BW3) 50S ribosomal protein L5P|
          Length = 170

 Score = 38.1 bits (87), Expect = 0.009
 Identities = 17/30 (56%), Positives = 22/30 (73%), Gaps = 1/30 (3%)
 Frame = -1

Query: 412 FGIQEHIDL-GMKYDPSXGIYGMDXFVVLE 326
           FGI ++ D  GMKYDP  GI+GMD  +VL+
Sbjct: 99  FGISDYTDFKGMKYDPDIGIFGMDVAIVLK 128

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>RL5_THEAC (Q56231) 50S ribosomal protein L5P|
          Length = 170

 Score = 37.4 bits (85), Expect = 0.015
 Identities = 22/71 (30%), Positives = 33/71 (46%), Gaps = 2/71 (2%)
 Frame = -1

Query: 412 FGIQEHIDL-GMKYDPSXGIYGMDXFVVLEXXXXXXXXXXXXXXXXGIHQ-RVTKEDAMK 239
           FGI ++ D  GMKYDP  GI+GMD  +V                    +  RV KE+A  
Sbjct: 99  FGISDYTDFKGMKYDPDIGIFGMDVAIVFRRRGGYRIERRRIGSKTIPNSIRVRKEEAQD 158

Query: 238 WFQVKYEGVIL 206
           + Q  ++  ++
Sbjct: 159 FLQKNFKVTVV 169

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>RL5_AERPE (Q9YF87) 50S ribosomal protein L5P|
          Length = 194

 Score = 36.6 bits (83), Expect = 0.025
 Identities = 17/34 (50%), Positives = 23/34 (67%), Gaps = 1/34 (2%)
 Frame = -1

Query: 424 GCFGFGIQEHIDL-GMKYDPSXGIYGMDXFVVLE 326
           G   FGI+EHI + G+KYDP  GI GMD  + ++
Sbjct: 120 GNVSFGIEEHILIPGVKYDPRVGILGMDVAITIQ 153

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>RL11_TOXCA (Q94793) 60S ribosomal protein L11 (Fragment)|
          Length = 125

 Score = 32.7 bits (73), Expect = 0.37
 Identities = 13/17 (76%), Positives = 15/17 (88%)
 Frame = -1

Query: 427 TGCFGFGIQEHIDLGMK 377
           TG FG G+QEHIDLG+K
Sbjct: 109 TGNFGLGVQEHIDLGIK 125

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>SPRR1_PIG (P35323) Cornifin (Small proline-rich protein I) (SPR-I) (Small|
           proline-rich squamous cell marker) (SPRP)
          Length = 97

 Score = 30.4 bits (67), Expect = 1.8
 Identities = 18/48 (37%), Positives = 23/48 (47%), Gaps = 6/48 (12%)
 Frame = -3

Query: 314 PCLPPP-----QVQGPCRYPPEGHQGGRHEVVPGQV*GCHPQ-QVPCE 189
           PC PPP     QV+ PC+ PP+         VP     CHP+   PC+
Sbjct: 9   PCTPPPQPQQQQVKQPCQPPPQ------EPCVPKTKEPCHPKVPEPCQ 50

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>BAT2_HUMAN (P48634) Large proline-rich protein BAT2 (HLA-B-associated transcript|
            2)
          Length = 2157

 Score = 29.6 bits (65), Expect = 3.1
 Identities = 13/27 (48%), Positives = 15/27 (55%)
 Frame = -3

Query: 317  VPCLPPPQVQGPCRYPPEGHQGGRHEV 237
            VPC  PP  + P R PP  H G R E+
Sbjct: 1696 VPCEGPPGSEPPRRPPPAPHDGDRKEL 1722

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>BAT2_MACMU (Q5TM26) Large proline-rich protein BAT2 (HLA-B-associated transcript|
            2)
          Length = 2160

 Score = 29.6 bits (65), Expect = 3.1
 Identities = 13/27 (48%), Positives = 15/27 (55%)
 Frame = -3

Query: 317  VPCLPPPQVQGPCRYPPEGHQGGRHEV 237
            VPC  PP  + P R PP  H G R E+
Sbjct: 1699 VPCEGPPGSEPPRRPPPAPHDGDRKEL 1725

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>SPR1B_HUMAN (P22528) Cornifin B (Small proline-rich protein IB) (SPR-IB) (14.9|
           kDa pancornulin)
          Length = 89

 Score = 29.6 bits (65), Expect = 3.1
 Identities = 17/47 (36%), Positives = 22/47 (46%), Gaps = 6/47 (12%)
 Frame = -3

Query: 314 PCLPPPQVQ-----GPCRYPPEGHQGGRHEVVPGQV*GCHPQ-QVPC 192
           PC PPPQ+Q      PC+ PP+         +P     CHP+   PC
Sbjct: 9   PCTPPPQLQQQQVKQPCQPPPQ------EPCIPKTKEPCHPKVPEPC 49

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>SYE_AGRT5 (Q8U7H5) Glutamyl-tRNA synthetase (EC 6.1.1.17) (Glutamate--tRNA|
           ligase) (GluRS)
          Length = 485

 Score = 28.9 bits (63), Expect = 5.3
 Identities = 22/70 (31%), Positives = 33/70 (47%)
 Frame = +2

Query: 152 LTQGLAIATSFLARMGLVEDDTLILDLEPLHGVLLGDPLVDTDTGLAPAAAGDTXPSTLE 331
           LT+GL +A S ++++G         +L  L G L     V +D GL PA+         E
Sbjct: 351 LTEGLKLAQSRISKLG---------ELPNLAGFL-----VSSDVGLTPASFAGLKSKPEE 396

Query: 332 HHEXVHTIDA 361
            HE + T+ A
Sbjct: 397 IHEILTTVAA 406

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>RL5_WOLPM (Q73H98) 50S ribosomal protein L5|
          Length = 177

 Score = 28.5 bits (62), Expect = 6.9
 Identities = 15/32 (46%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
 Frame = -1

Query: 424 GCFGFGIQEHID-LGMKYDPSXGIYGMDXFVV 332
           G F FGI+EHI  L + YD    I GMD  ++
Sbjct: 124 GNFSFGIKEHISFLEIDYDKISKIRGMDINII 155

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>ZN207_HUMAN (O43670) Zinc finger protein 207|
          Length = 478

 Score = 28.5 bits (62), Expect = 6.9
 Identities = 14/36 (38%), Positives = 18/36 (50%)
 Frame = -3

Query: 314 PCLPPPQVQGPCRYPPEGHQGGRHEVVPGQV*GCHP 207
           P +P  Q   P   PP G  GG H+ +PG + G  P
Sbjct: 410 PGIPQQQGMRP-PMPPHGQYGGHHQGMPGYLPGAMP 444

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>SPRR1_MACMU (P35322) Cornifin (Small proline-rich protein I) (SPR-I) (Small|
           proline-rich squamous cell marker)
          Length = 89

 Score = 28.1 bits (61), Expect = 9.0
 Identities = 17/50 (34%), Positives = 24/50 (48%), Gaps = 8/50 (16%)
 Frame = -3

Query: 314 PCLPPPQVQ-----GPCRYPPEGH--QGGRHEVVPGQV*GCHPQ-QVPCE 189
           PC PPPQ+Q      PC+ PP+       +   +P     CHP+   PC+
Sbjct: 9   PCTPPPQLQQQQVKQPCQPPPQEPCIPKTKEPCLPKVPEPCHPKVPEPCQ 58

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>AGO2_DROME (Q9VUQ5) Argonaute 2 protein|
          Length = 1214

 Score = 28.1 bits (61), Expect = 9.0
 Identities = 14/34 (41%), Positives = 18/34 (52%)
 Frame = -3

Query: 305 PPPQVQGPCRYPPEGHQGGRHEVVPGQV*GCHPQ 204
           PP Q QG  +   +G +GG  +  PGQ  G H Q
Sbjct: 252 PPGQQQGGHQQGRQGQEGGYQQRPPGQQQGGHEQ 285



 Score = 28.1 bits (61), Expect = 9.0
 Identities = 14/34 (41%), Positives = 18/34 (52%)
 Frame = -3

Query: 305 PPPQVQGPCRYPPEGHQGGRHEVVPGQV*GCHPQ 204
           PP Q QG  +   +G +GG  +  PGQ  G H Q
Sbjct: 137 PPGQQQGGHQQGRQGQEGGYQQRPPGQQQGGHQQ 170

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>SPR1A_MOUSE (Q62266) Cornifin A (Small proline-rich protein 1A) (SPR1A) (SPR1|
           A)
          Length = 144

 Score = 28.1 bits (61), Expect = 9.0
 Identities = 16/46 (34%), Positives = 19/46 (41%), Gaps = 5/46 (10%)
 Frame = -3

Query: 314 PCLPPPQ-----VQGPCRYPPEGHQGGRHEVVPGQV*GCHPQQVPC 192
           PC  PPQ     V+ PC+ PP+          P     CHP   PC
Sbjct: 9   PCTVPPQLHQQQVKQPCQPPPQ------EPCAPKTKDPCHPVPEPC 48

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>OPSD_TODPA (P31356) Rhodopsin|
          Length = 447

 Score = 28.1 bits (61), Expect = 9.0
 Identities = 16/39 (41%), Positives = 19/39 (48%), Gaps = 2/39 (5%)
 Frame = -3

Query: 305 PPPQVQGPCRYPPEGH--QGGRHEVVPGQV*GCHPQQVP 195
           PPPQ   P  YPP+G+  QG   +  P    G  PQ  P
Sbjct: 394 PPPQGYPPQGYPPQGYPPQGYPPQGYPPPPQGAPPQGAP 432


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 62,729,234
Number of Sequences: 219361
Number of extensions: 1276833
Number of successful extensions: 3452
Number of sequences better than 10.0: 57
Number of HSP's better than 10.0 without gapping: 3237
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3413
length of database: 80,573,946
effective HSP length: 101
effective length of database: 58,418,485
effective search space used: 2336739400
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result