ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags26j23
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AP003570.3| Oryza sativa (japonica cultivar-group) genomic D... 107 5e-20
2dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 107 5e-20
3dbj|AP004331.3| Oryza sativa (japonica cultivar-group) genomic D... 107 5e-20
4dbj|AK104661.1| Oryza sativa (japonica cultivar-group) cDNA clon... 107 5e-20
5dbj|AK069730.1| Oryza sativa (japonica cultivar-group) cDNA clon... 107 5e-20
6dbj|AK061117.1| Oryza sativa (japonica cultivar-group) cDNA clon... 107 5e-20
7emb|AL731533.8| Human DNA sequence from clone RP11-118K6 on chro... 44 0.56
8gb|AC102287.16| Mus musculus chromosome 8, clone RP24-345M16, co... 42 2.2
9emb|AJ224683.1|NPAJ4683 Narcissus pseudonarcissus mRNA for zeta-... 42 2.2
10ref|XM_640037.1| Dictyostelium discoideum hypothetical protein (... 40 8.8
11gb|AC166817.3| Mus musculus BAC clone RP24-530C16 from chromosom... 40 8.8
12gb|AC147027.4| Pan troglodytes BAC clone RP43-92F2 from 7, compl... 40 8.8
13ref|XM_414691.1| PREDICTED: Gallus gallus similar to SET-binding... 40 8.8
14gb|AC161021.4| Pan troglodytes BAC clone CH251-2N24 from chromos... 40 8.8
15gb|AC161472.4| Pan troglodytes BAC clone CH251-584L3 from chromo... 40 8.8
16gb|AE016853.1| Pseudomonas syringae pv. tomato str. DC3000 compl... 40 8.8
17gb|AC140240.2| Mus musculus BAC clone RP24-281M12 from chromosom... 40 8.8
18gb|AC115680.3| Dictyostelium discoideum chromosome 2 map 4915084... 40 8.8
19ref|XM_993394.1| PREDICTED: Mus musculus hypothetical protein LO... 40 8.8
20gb|AC135963.3| Mus musculus BAC clone RP23-346N11 from chromosom... 40 8.8
21gb|AC092729.3| Canis familiaris clone RP81-60B6, complete sequence 40 8.8
22gb|AC002564.1| Homo sapiens BAC clone CTB-164L14 from 7, complet... 40 8.8
23gb|AC137837.3| Medicago truncatula clone mth2-30e7, complete seq... 40 8.8
24emb|AL392166.19| Human DNA sequence from clone RP11-758J17 on ch... 40 8.8
25gb|AC153460.22| Medicago truncatula clone mth2-76i7, complete se... 40 8.8
26gb|AC084881.19| Homo sapiens 12 BAC RP11-768F21 (Roswell Park Ca... 40 8.8
27gb|AC093810.4| Homo sapiens BAC clone RP11-354O24 from 4, comple... 40 8.8
28gb|AC093675.4| Homo sapiens BAC clone RP11-592G13 from 2, comple... 40 8.8
29gb|AC104812.5| Homo sapiens BAC clone RP11-656O23 from 2, comple... 40 8.8
30gb|AC092843.4| Homo sapiens BAC clone RP11-419O4 from 2, complet... 40 8.8
31gb|AC019208.8| Homo sapiens BAC clone RP11-439J5 from 2, complet... 40 8.8
32gb|AC017002.4| Homo sapiens BAC clone RP11-68E19 from 2, complet... 40 8.8
33gb|AC034099.16| Mus Musculus Strain C57BL6/J Chromosome 7 BAC, R... 40 8.8
34emb|X95964.1|ATCER1L A.thaliana CER1-like gene (4200bp) 40 8.8
35gb|AY104696.1| Zea mays PCO105438 mRNA sequence 40 8.8
36emb|CT485797.2| Medicago truncatula chromosome 5 clone mth4-11a3... 40 8.8
37gb|AC131120.4| Mus musculus BAC clone RP24-547N4 from 10, comple... 40 8.8
38gb|AC170594.2| Mus musculus BAC clone RP24-425N5 from chromosome... 40 8.8
39emb|AL731864.25| Mouse DNA sequence from clone RP23-342F20 on ch... 40 8.8
40emb|AL158059.3|CNS01RGK Human chromosome 14 DNA sequence BAC C-2... 40 8.8 
>dbj|AP003570.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0432B10
          Length = 131918

 Score =  107 bits (54), Expect = 5e-20
 Identities = 108/126 (85%)
 Strand = Plus / Plus

                                                                          
Query: 273    aagaagcaagttggttctgactcaagaaagagaacatccctttgtacttggcagccacaa 332
              ||||||| || ||||| |||||| | |  ||||||||||| |||||||| ||||||||||
Sbjct: 130607 aagaagctagctggttgtgactccatagtgagaacatccccttgtactttgcagccacaa 130666

                                                                          
Query: 333    attggcgtgatagcatgcttatcggcggctccttgcagcagctggagctgcgtttgatcg 392
              | |||||||| || | ||| |  ||| |||||||||||||||||||||||||||||||||
Sbjct: 130667 actggcgtgacagaaagctcaaaggctgctccttgcagcagctggagctgcgtttgatcg 130726

                    
Query: 393    gttcca 398
              | ||||
Sbjct: 130727 gctcca 130732
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score =  107 bits (54), Expect = 5e-20
 Identities = 108/126 (85%)
 Strand = Plus / Plus

                                                                            
Query: 273      aagaagcaagttggttctgactcaagaaagagaacatccctttgtacttggcagccacaa 332
                ||||||| || ||||| |||||| | |  ||||||||||| |||||||| ||||||||||
Sbjct: 34633313 aagaagctagctggttgtgactccatagtgagaacatccccttgtactttgcagccacaa 34633372

                                                                            
Query: 333      attggcgtgatagcatgcttatcggcggctccttgcagcagctggagctgcgtttgatcg 392
                | |||||||| || | ||| |  ||| |||||||||||||||||||||||||||||||||
Sbjct: 34633373 actggcgtgacagaaagctcaaaggctgctccttgcagcagctggagctgcgtttgatcg 34633432

                      
Query: 393      gttcca 398
                | ||||
Sbjct: 34633433 gctcca 34633438
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>dbj|AP004331.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:OSJNBa0085D07
          Length = 172483

 Score =  107 bits (54), Expect = 5e-20
 Identities = 108/126 (85%)
 Strand = Plus / Plus

                                                                         
Query: 273   aagaagcaagttggttctgactcaagaaagagaacatccctttgtacttggcagccacaa 332
             ||||||| || ||||| |||||| | |  ||||||||||| |||||||| ||||||||||
Sbjct: 85330 aagaagctagctggttgtgactccatagtgagaacatccccttgtactttgcagccacaa 85389

                                                                         
Query: 333   attggcgtgatagcatgcttatcggcggctccttgcagcagctggagctgcgtttgatcg 392
             | |||||||| || | ||| |  ||| |||||||||||||||||||||||||||||||||
Sbjct: 85390 actggcgtgacagaaagctcaaaggctgctccttgcagcagctggagctgcgtttgatcg 85449

                   
Query: 393   gttcca 398
             | ||||
Sbjct: 85450 gctcca 85455
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>dbj|AK104661.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-311-E03, full
           insert sequence
          Length = 1158

 Score =  107 bits (54), Expect = 5e-20
 Identities = 108/126 (85%)
 Strand = Plus / Minus

                                                                       
Query: 273 aagaagcaagttggttctgactcaagaaagagaacatccctttgtacttggcagccacaa 332
           ||||||| || ||||| |||||| | |  ||||||||||| |||||||| ||||||||||
Sbjct: 935 aagaagctagctggttgtgactccatagtgagaacatccccttgtactttgcagccacaa 876

                                                                       
Query: 333 attggcgtgatagcatgcttatcggcggctccttgcagcagctggagctgcgtttgatcg 392
           | |||||||| || | ||| |  ||| |||||||||||||||||||||||||||||||||
Sbjct: 875 actggcgtgacagaaagctcaaaggctgctccttgcagcagctggagctgcgtttgatcg 816

                 
Query: 393 gttcca 398
           | ||||
Sbjct: 815 gctcca 810
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>dbj|AK069730.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023026G14, full
            insert sequence
          Length = 2162

 Score =  107 bits (54), Expect = 5e-20
 Identities = 108/126 (85%)
 Strand = Plus / Minus

                                                                        
Query: 273  aagaagcaagttggttctgactcaagaaagagaacatccctttgtacttggcagccacaa 332
            ||||||| || ||||| |||||| | |  ||||||||||| |||||||| ||||||||||
Sbjct: 1894 aagaagctagctggttgtgactccatagtgagaacatccccttgtactttgcagccacaa 1835

                                                                        
Query: 333  attggcgtgatagcatgcttatcggcggctccttgcagcagctggagctgcgtttgatcg 392
            | |||||||| || | ||| |  ||| |||||||||||||||||||||||||||||||||
Sbjct: 1834 actggcgtgacagaaagctcaaaggctgctccttgcagcagctggagctgcgtttgatcg 1775

                  
Query: 393  gttcca 398
            | ||||
Sbjct: 1774 gctcca 1769
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>dbj|AK061117.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-207-F03, full
           insert sequence
          Length = 1180

 Score =  107 bits (54), Expect = 5e-20
 Identities = 108/126 (85%)
 Strand = Plus / Minus

                                                                       
Query: 273 aagaagcaagttggttctgactcaagaaagagaacatccctttgtacttggcagccacaa 332
           ||||||| || ||||| |||||| | |  ||||||||||| |||||||| ||||||||||
Sbjct: 912 aagaagctagctggttgtgactccatagtgagaacatccccttgtactttgcagccacaa 853

                                                                       
Query: 333 attggcgtgatagcatgcttatcggcggctccttgcagcagctggagctgcgtttgatcg 392
           | |||||||| || | ||| |  ||| |||||||||||||||||||||||||||||||||
Sbjct: 852 actggcgtgacagaaagctcaaaggctgctccttgcagcagctggagctgcgtttgatcg 793

                 
Query: 393 gttcca 398
           | ||||
Sbjct: 792 gctcca 787
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>emb|AL731533.8| Human DNA sequence from clone RP11-118K6 on chromosome 10 Contains a
             novel gene, the 5' end of the PFKP gene for
             phosphofructokinase platelet and a CpG island, complete
             sequence
          Length = 98398

 Score = 44.1 bits (22), Expect = 0.56
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 47    tacacagataaatgagcaaaga 68
             ||||||||||||||||||||||
Sbjct: 81057 tacacagataaatgagcaaaga 81036
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>gb|AC102287.16| Mus musculus chromosome 8, clone RP24-345M16, complete sequence
          Length = 179888

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 133   aaccaaagaattttcaaaaccatgt 157
             ||||||||||||||||||| |||||
Sbjct: 59870 aaccaaagaattttcaaaaacatgt 59894
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>emb|AJ224683.1|NPAJ4683 Narcissus pseudonarcissus mRNA for zeta-carotene desaturase
          Length = 2133

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 479 gggggcatggcttcttccact 499
           |||||||||||||||||||||
Sbjct: 8   gggggcatggcttcttccact 28
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>ref|XM_640037.1| Dictyostelium discoideum hypothetical protein (DDB0217043), partial
            mRNA
          Length = 3241

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 132  caaccaaagaattttcaaaa 151
            ||||||||||||||||||||
Sbjct: 1054 caaccaaagaattttcaaaa 1073
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>gb|AC166817.3| Mus musculus BAC clone RP24-530C16 from chromosome 10, complete
             sequence
          Length = 155876

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 364   cttgcagcagctggagctgc 383
             ||||||||||||||||||||
Sbjct: 31710 cttgcagcagctggagctgc 31691
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>gb|AC147027.4| Pan troglodytes BAC clone RP43-92F2 from 7, complete sequence
          Length = 162023

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 620   ctgctgctgccaccattgct 639
             ||||||||||||||||||||
Sbjct: 98947 ctgctgctgccaccattgct 98966
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>ref|XM_414691.1| PREDICTED: Gallus gallus similar to SET-binding protein (SEB)
            (LOC416377), mRNA
          Length = 4047

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 312  ctttgtacttggcagccaca 331
            ||||||||||||||||||||
Sbjct: 3335 ctttgtacttggcagccaca 3354
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>gb|AC161021.4| Pan troglodytes BAC clone CH251-2N24 from chromosome 7, complete sequence
          Length = 187139

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 620    ctgctgctgccaccattgct 639
              ||||||||||||||||||||
Sbjct: 140853 ctgctgctgccaccattgct 140872
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>gb|AC161472.4| Pan troglodytes BAC clone CH251-584L3 from chromosome 7, complete
            sequence
          Length = 189756

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 620  ctgctgctgccaccattgct 639
            ||||||||||||||||||||
Sbjct: 4739 ctgctgctgccaccattgct 4758
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>gb|AE016853.1| Pseudomonas syringae pv. tomato str. DC3000 complete genome
          Length = 6397126

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 595     atgttgaggatcactagcat 614
               ||||||||||||||||||||
Sbjct: 4768197 atgttgaggatcactagcat 4768178
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>gb|AC140240.2| Mus musculus BAC clone RP24-281M12 from chromosome 18, complete
             sequence
          Length = 166476

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 131   tcaaccaaagaattttcaaaacca 154
             |||||||||||||||| |||||||
Sbjct: 99375 tcaaccaaagaatttttaaaacca 99352
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>gb|AC115680.3| Dictyostelium discoideum chromosome 2 map 4915084-5005461 strain AX4,
             complete sequence
          Length = 90373

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 132   caaccaaagaattttcaaaa 151
             ||||||||||||||||||||
Sbjct: 88662 caaccaaagaattttcaaaa 88681
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>ref|XM_993394.1| PREDICTED: Mus musculus hypothetical protein LOC672428 (LOC672428),
           mRNA
          Length = 666

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 364 cttgcagcagctggagctgc 383
           ||||||||||||||||||||
Sbjct: 180 cttgcagcagctggagctgc 161
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>gb|AC135963.3| Mus musculus BAC clone RP23-346N11 from chromosome 7, complete
            sequence
          Length = 202404

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 364  cttgcagcagctggagctgc 383
            ||||||||||||||||||||
Sbjct: 1901 cttgcagcagctggagctgc 1882
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>gb|AC092729.3| Canis familiaris clone RP81-60B6, complete sequence
          Length = 165116

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 172   ccaaaagtccacagatcaaa 191
             ||||||||||||||||||||
Sbjct: 75165 ccaaaagtccacagatcaaa 75146
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>gb|AC002564.1| Homo sapiens BAC clone CTB-164L14 from 7, complete sequence
          Length = 94320

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 620   ctgctgctgccaccattgct 639
             ||||||||||||||||||||
Sbjct: 55320 ctgctgctgccaccattgct 55339
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>gb|AC137837.3| Medicago truncatula clone mth2-30e7, complete sequence
          Length = 79015

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 566   ctgctagtgatgatgccata 585
             ||||||||||||||||||||
Sbjct: 25226 ctgctagtgatgatgccata 25245
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>emb|AL392166.19| Human DNA sequence from clone RP11-758J17 on chromosome 6 Contains the
             3' end of the IMPG1 gene for interphotoreceptor matrix
             proteoglycan 1, complete sequence
          Length = 90766

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 26    taacacacataagatgctta 45
             ||||||||||||||||||||
Sbjct: 70640 taacacacataagatgctta 70659
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>gb|AC153460.22| Medicago truncatula clone mth2-76i7, complete sequence
          Length = 127094

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 566   ctgctagtgatgatgccata 585
             ||||||||||||||||||||
Sbjct: 93849 ctgctagtgatgatgccata 93830
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>gb|AC084881.19| Homo sapiens 12 BAC RP11-768F21 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 194598

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 610    agcatcagttctgctgctgc 629
              ||||||||||||||||||||
Sbjct: 115968 agcatcagttctgctgctgc 115987
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>gb|AC093810.4| Homo sapiens BAC clone RP11-354O24 from 4, complete sequence
          Length = 146671

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 88    ataatgagcaaagatacttgacaa 111
             ||||||||||||||||||| ||||
Sbjct: 94968 ataatgagcaaagatactttacaa 94945
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>gb|AC093675.4| Homo sapiens BAC clone RP11-592G13 from 2, complete sequence
          Length = 123182

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 539   tattcaggaacactagtgtc 558
             ||||||||||||||||||||
Sbjct: 14407 tattcaggaacactagtgtc 14388
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>gb|AC104812.5| Homo sapiens BAC clone RP11-656O23 from 2, complete sequence
          Length = 120574

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 615 cagttctgctgctgccacca 634
           ||||||||||||||||||||
Sbjct: 128 cagttctgctgctgccacca 109
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>gb|AC092843.4| Homo sapiens BAC clone RP11-419O4 from 2, complete sequence
          Length = 83412

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 615   cagttctgctgctgccacca 634
             ||||||||||||||||||||
Sbjct: 81539 cagttctgctgctgccacca 81520
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>gb|AC019208.8| Homo sapiens BAC clone RP11-439J5 from 2, complete sequence
          Length = 188164

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 620   ctgctgctgccaccattgct 639
             ||||||||||||||||||||
Sbjct: 22891 ctgctgctgccaccattgct 22910
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>gb|AC017002.4| Homo sapiens BAC clone RP11-68E19 from 2, complete sequence
          Length = 205662

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 172    ccaaaagtccacagatcaaa 191
              ||||||||||||||||||||
Sbjct: 125146 ccaaaagtccacagatcaaa 125127
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>gb|AC034099.16| Mus Musculus Strain C57BL6/J Chromosome 7 BAC, RP23-145I16, complete
              sequence
          Length = 229553

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 364    cttgcagcagctggagctgc 383
              ||||||||||||||||||||
Sbjct: 155831 cttgcagcagctggagctgc 155812
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>emb|X95964.1|ATCER1L A.thaliana CER1-like gene (4200bp)
          Length = 4200

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 284 tggttctgactcaagaaagagaac 307
           ||||||||||| ||||||||||||
Sbjct: 410 tggttctgactaaagaaagagaac 433
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>gb|AY104696.1| Zea mays PCO105438 mRNA sequence
          Length = 1009

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 41/48 (85%)
 Strand = Plus / Minus

                                                           
Query: 271 tcaagaagcaagttggttctgactcaagaaagagaacatccctttgta 318
           ||||||||| || ||||| || ||| |||| ||||||||||| |||||
Sbjct: 735 tcaagaagccagctggttttggctccagaaggagaacatccccttgta 688
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>emb|CT485797.2| Medicago truncatula chromosome 5 clone mth4-11a3, COMPLETE SEQUENCE
          Length = 211224

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 186    atcaaaacaccgtccaacatgaag 209
              |||||||||||||||| |||||||
Sbjct: 142508 atcaaaacaccgtccagcatgaag 142485
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>gb|AC131120.4| Mus musculus BAC clone RP24-547N4 from 10, complete sequence
          Length = 228657

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 364    cttgcagcagctggagctgc 383
              ||||||||||||||||||||
Sbjct: 164085 cttgcagcagctggagctgc 164066
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>gb|AC170594.2| Mus musculus BAC clone RP24-425N5 from chromosome 17, complete sequence
          Length = 161769

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 620   ctgctgctgccaccattgctactg 643
             ||||||||||||||| ||||||||
Sbjct: 93648 ctgctgctgccaccagtgctactg 93625



 Score = 40.1 bits (20), Expect = 8.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 620   ctgctgctgccaccattgctactg 643
             ||||||||||||||| ||||||||
Sbjct: 47260 ctgctgctgccaccagtgctactg 47237
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>emb|AL731864.25| Mouse DNA sequence from clone RP23-342F20 on chromosome 7, complete
             sequence
          Length = 148047

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 364   cttgcagcagctggagctgc 383
             ||||||||||||||||||||
Sbjct: 75469 cttgcagcagctggagctgc 75488
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>emb|AL158059.3|CNS01RGK Human chromosome 14 DNA sequence BAC C-2007A10 of library CalTech-D from
              chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 148515

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 35     taagatgcttattacacagataaa 58
              |||||||||||||||||| |||||
Sbjct: 102248 taagatgcttattacacacataaa 102225


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,529,817
Number of Sequences: 3902068
Number of extensions: 5529817
Number of successful extensions: 123889
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 40
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 123578
Number of HSP's gapped (non-prelim): 311
length of query: 643
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 620
effective length of database: 17,143,297,704
effective search space: 10628844576480
effective search space used: 10628844576480
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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