ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaal1f21
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1GSTU1_ORYSA (O65032) Probable glutathione S-transferase GSTU1 (E... 110 3e-24
2GSTXC_TOBAC (P49332) Probable glutathione S-transferase parC (EC... 82 1e-15
3GSTX4_TOBAC (Q03666) Probable glutathione S-transferase (EC 2.5.... 80 3e-15
4GSTXA_TOBAC (P25317) Probable glutathione S-transferase parA (EC... 78 1e-14
5LGUL_SOYBN (P46417) Lactoylglutathione lyase (EC 4.4.1.5) (Methy... 73 6e-13
6GSTX1_NICPL (P50471) Probable glutathione S-transferase MSR-1 (E... 69 1e-11
7CYAA_DICDI (Q03100) Adenylate cyclase, aggregation specific (EC ... 32 1.1
8GPI16_SCHPO (O94380) GPI transamidase component PIG-T homolog pr... 30 3.3
9CNG_ICTPU (P55934) Cyclic nucleotide-gated cation channel 30 3.3
10DHPH_BACBA (Q59224) Phenylalanine dehydrogenase (EC 1.4.1.20) (P... 29 7.5

>GSTU1_ORYSA (O65032) Probable glutathione S-transferase GSTU1 (EC 2.5.1.18)|
          Length = 231

 Score =  110 bits (274), Expect = 3e-24
 Identities = 48/71 (67%), Positives = 59/71 (83%)
 Frame = -3

Query: 541 KFGFVDAAFAPFTAWFHSYERYGEFSLAEVAPKIAAWAKRCGERESVAKSLYSPEKVYDF 362
           + GFVD A  PFTAWF+SYER G FS+ EVAP++AAWA+RCG  +SV K L SPEKVYDF
Sbjct: 161 RLGFVDVALVPFTAWFYSYERCGGFSVEEVAPRLAAWARRCGRIDSVVKHLPSPEKVYDF 220

Query: 361 IGLLKKRYGIE 329
           +G+LKK+YG+E
Sbjct: 221 VGVLKKKYGVE 231



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>GSTXC_TOBAC (P49332) Probable glutathione S-transferase parC (EC 2.5.1.18)|
           (Auxin-regulated protein parC)
          Length = 221

 Score = 81.6 bits (200), Expect = 1e-15
 Identities = 36/70 (51%), Positives = 49/70 (70%)
 Frame = -3

Query: 538 FGFVDAAFAPFTAWFHSYERYGEFSLAEVAPKIAAWAKRCGERESVAKSLYSPEKVYDFI 359
           FGFVD A   F +WF++YE +G FS     PK  AWAKRC +RESVAKSL    KV +F+
Sbjct: 152 FGFVDIALIGFYSWFYAYETFGNFSTEAECPKFVAWAKRCMQRESVAKSLPDQPKVLEFV 211

Query: 358 GLLKKRYGIE 329
            +L++++G+E
Sbjct: 212 KVLRQKFGLE 221



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>GSTX4_TOBAC (Q03666) Probable glutathione S-transferase (EC 2.5.1.18)|
           (Auxin-induced protein PCNT107)
          Length = 221

 Score = 80.5 bits (197), Expect = 3e-15
 Identities = 35/70 (50%), Positives = 49/70 (70%)
 Frame = -3

Query: 538 FGFVDAAFAPFTAWFHSYERYGEFSLAEVAPKIAAWAKRCGERESVAKSLYSPEKVYDFI 359
           FGFVD A   + +WF++YE +G FS     PK  AWAKRC +RESVAKSL    KV +F+
Sbjct: 152 FGFVDIALIGYYSWFYAYETFGNFSTEAECPKFVAWAKRCMQRESVAKSLPDQPKVLEFV 211

Query: 358 GLLKKRYGIE 329
            +L++++G+E
Sbjct: 212 KVLRQKFGLE 221



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>GSTXA_TOBAC (P25317) Probable glutathione S-transferase parA (EC 2.5.1.18)|
           (Auxin-regulated protein parA) (STR246C protein)
          Length = 220

 Score = 78.2 bits (191), Expect = 1e-14
 Identities = 35/68 (51%), Positives = 44/68 (64%)
 Frame = -3

Query: 535 GFVDAAFAPFTAWFHSYERYGEFSLAEVAPKIAAWAKRCGERESVAKSLYSPEKVYDFIG 356
           GFVD A  PFT+WF+SYE    FS+    PK+  WAK C E ESV+KSL  P K+Y F+ 
Sbjct: 152 GFVDVALVPFTSWFYSYETCANFSIEAECPKLVVWAKTCMESESVSKSLPHPHKIYGFVL 211

Query: 355 LLKKRYGI 332
            LK + G+
Sbjct: 212 ELKHKLGL 219



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>LGUL_SOYBN (P46417) Lactoylglutathione lyase (EC 4.4.1.5) (Methylglyoxalase)|
           (Aldoketomutase) (Glyoxalase I)
          Length = 219

 Score = 72.8 bits (177), Expect = 6e-13
 Identities = 32/65 (49%), Positives = 43/65 (66%)
 Frame = -3

Query: 538 FGFVDAAFAPFTAWFHSYERYGEFSLAEVAPKIAAWAKRCGERESVAKSLYSPEKVYDFI 359
           FGFVD     F++WF++YE YG F + E  PK+ AW KRC ERE+V+ +L   +KVY  I
Sbjct: 150 FGFVDLCLITFSSWFYTYETYGNFKMEEECPKLMAWVKRCMERETVSNTLPDAKKVYGLI 209

Query: 358 GLLKK 344
             L+K
Sbjct: 210 VELQK 214



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>GSTX1_NICPL (P50471) Probable glutathione S-transferase MSR-1 (EC 2.5.1.18)|
           (Auxin-regulated protein MSR-1)
          Length = 219

 Score = 68.6 bits (166), Expect = 1e-11
 Identities = 32/68 (47%), Positives = 42/68 (61%)
 Frame = -3

Query: 535 GFVDAAFAPFTAWFHSYERYGEFSLAEVAPKIAAWAKRCGERESVAKSLYSPEKVYDFIG 356
           GFVD A  PFT+WF+SYE    FS+     K+  W + C E E V+KSL  P K+YDF+ 
Sbjct: 152 GFVDVALVPFTSWFYSYETCANFSIEAECRKLVVW-QNCMENERVSKSLPHPHKIYDFVL 210

Query: 355 LLKKRYGI 332
            LK + G+
Sbjct: 211 ELKHKLGL 218



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>CYAA_DICDI (Q03100) Adenylate cyclase, aggregation specific (EC 4.6.1.1) (ATP|
           pyrophosphate-lyase) (Adenylyl cyclase)
          Length = 1407

 Score = 32.0 bits (71), Expect = 1.1
 Identities = 13/47 (27%), Positives = 24/47 (51%)
 Frame = +1

Query: 43  GIAGGNSVLPPPKTRVDT*HTHRAGEHNTHPHCLTQPYTTNHSHANN 183
           G  GG   + P    +++   +    HN HP+ L+ P+  NH++ N+
Sbjct: 68  GGGGGGGHINPMHLNLNSITNNHNNHHNHHPNTLSTPHNNNHNNNNH 114



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>GPI16_SCHPO (O94380) GPI transamidase component PIG-T homolog precursor|
          Length = 545

 Score = 30.4 bits (67), Expect = 3.3
 Identities = 22/74 (29%), Positives = 29/74 (39%)
 Frame = +1

Query: 37  RNGIAGGNSVLPPPKTRVDT*HTHRAGEHNTHPHCLTQPYTTNHSHANNLFH**RKKYPN 216
           RNG   G +   PP       + H   E     HCL   Y+T H   ++LFH    K P 
Sbjct: 247 RNGRRKGKTTFQPPSE-----YCH--DEDMDSLHCLMSGYSTEHHTVDDLFH----KVPK 295

Query: 217 ARTXXHPNRSIIFI 258
            R       S +F+
Sbjct: 296 ERCLLSSTFSDVFV 309



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>CNG_ICTPU (P55934) Cyclic nucleotide-gated cation channel|
          Length = 682

 Score = 30.4 bits (67), Expect = 3.3
 Identities = 19/44 (43%), Positives = 19/44 (43%), Gaps = 1/44 (2%)
 Frame = +2

Query: 74  HRRPGLTHDTHIEQEST-TRTHTA*PNHILPTTHTRTIYSTNKE 202
           H   GL  D   E E     THT    H  P THTRT   TN E
Sbjct: 636 HTGLGLLSDNEAEGEHAGVPTHTHADIHAQPETHTRTSAETNSE 679



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>DHPH_BACBA (Q59224) Phenylalanine dehydrogenase (EC 1.4.1.20) (PheDH)|
          Length = 380

 Score = 29.3 bits (64), Expect = 7.5
 Identities = 12/33 (36%), Positives = 19/33 (57%)
 Frame = -2

Query: 107 CVCHVSTLVFGGGSTELPPAIPFLYPLRAMNKL 9
           C+  V     GGG + +P A+  LY ++A NK+
Sbjct: 142 CIVGVPEAYGGGGDSSIPTAMGVLYGIKATNKM 174


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 73,245,199
Number of Sequences: 219361
Number of extensions: 1517881
Number of successful extensions: 4318
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 4162
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4300
length of database: 80,573,946
effective HSP length: 105
effective length of database: 57,541,041
effective search space used: 4315578075
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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