ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags26j09
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AY105792.1| Zea mays PCO111792 mRNA sequence 339 7e-90
2dbj|AK060514.1| Oryza sativa (japonica cultivar-group) cDNA clon... 305 9e-80
3dbj|AK120022.1| Oryza sativa (japonica cultivar-group) cDNA clon... 287 2e-74
4gb|BT009573.1| Triticum aestivum clone wre1n.pk0027.d4:fis, full... 190 4e-45
5dbj|AK102755.1| Oryza sativa (japonica cultivar-group) cDNA clon... 186 6e-44
6gb|AY111650.1| Zea mays CL15598_1 mRNA sequence 174 2e-40
7gb|AC104272.5| Oryza sativa (japonica cultivar-group) chromosome... 127 5e-26
8dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 127 5e-26
9gb|AY665227.1| Saimiri boliviensis transforming growth factor-be... 46 0.14
10gb|AC147007.17| Medicago truncatula clone mth2-26c3, complete se... 44 0.54
11gb|AC147437.2| Gallus gallus BAC clone CH261-80L21 from chromoso... 44 0.54
12ref|XM_459494.1| Debaryomyces hansenii CBS767 hypothetical prote... 42 2.1
13gb|AC006316.2| Homo sapiens PAC clone RP4-672O11 from 7, complet... 42 2.1
14gb|AC127314.4| Mus musculus BAC clone RP23-217N4 from chromosome... 42 2.1
15gb|BC090585.1| Xenopus tropicalis MGC69392 protein, mRNA (cDNA c... 42 2.1
16gb|AC126071.5| Rattus norvegicus 10 BAC CH230-209B21 (Children's... 42 2.1
17ref|NM_001030377.1| Xenopus tropicalis MGC69392 protein (MGC6939... 42 2.1
18emb|CR382137.1| Debaryomyces hansenii chromosome E of strain CBS... 42 2.1
19gb|AC163347.4| Mus musculus BAC clone RP23-259F13 from chromosom... 42 2.1
20gb|AC147653.5| Pan troglodytes BAC clone RP43-145M20 from chromo... 42 2.1
21gb|AC127185.3| Rattus norvegicus BAC CH230-28E5 (Children's Hos... 42 2.1
22gb|AC115766.9| Mus musculus chromosome 1, clone RP23-82I24, comp... 40 8.4
23gb|AC139673.9| Mus musculus chromosome 1, clone RP23-280I2, comp... 40 8.4
24gb|AC102596.8| Mus musculus chromosome 8, clone RP23-360N8, comp... 40 8.4
25gb|AC166541.2| Nectria haematococca clone JGIAYWI-5B17, complete... 40 8.4
26gb|AC109594.2| Oryza sativa (japonica cultivar-group) chromosome... 40 8.4
27emb|AL365179.30| Human DNA sequence from clone RP13-34C21 on chr... 40 8.4
28emb|AL359633.15| Human DNA sequence from clone RP11-795J1 on chr... 40 8.4
29gb|AC153538.10| Mus musculus 10 BAC RP23-136I11 (Roswell Park Ca... 40 8.4
30gb|AC153946.10| Mus musculus 10 BAC RP24-416M20 (Roswell Park Ca... 40 8.4
31emb|BX548012.11| Zebrafish DNA sequence from clone DKEY-271O4 in... 40 8.4
32dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.4
33dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.4
34dbj|AP003434.2| Oryza sativa (japonica cultivar-group) genomic D... 40 8.4
35gb|AC079042.31| Mus musculus strain C57BL/6J chromosome 3 clone ... 40 8.4
36gb|AC140442.4| Mus musculus BAC clone RP24-106P1 from 12, comple... 40 8.4
37emb|BX005202.14| Zebrafish DNA sequence from clone DKEY-224N5 in... 40 8.4
38emb|BX255967.4| Zebrafish DNA sequence from clone CH211-191G22 i... 40 8.4
39emb|Z71684.1|SCYNR069C S.cerevisiae chromosome XIV reading frame... 40 8.4
40gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 40 8.4
41gb|AC163040.5| Mus musculus BAC clone RP23-71C23 from chromosome... 40 8.4
42gb|AC163223.15| Mus musculus chromosome 8, clone RP24-334B10, co... 40 8.4
43emb|AL626771.9| Mouse DNA sequence from clone RP23-281O10 on chr... 40 8.4
44emb|AL596456.15| Mouse DNA sequence from clone RP23-353K20 on ch... 40 8.4
45emb|AL713865.10| Mouse DNA sequence from clone RP23-451D4 on chr... 40 8.4
46gb|AY067803.1| Schmidtea mediterranea clone HB.18.4h unknown mRN... 40 8.4
47emb|AL671877.15| Mouse DNA sequence from clone RP23-214E3 on chr... 40 8.4 
>gb|AY105792.1| Zea mays PCO111792 mRNA sequence
          Length = 1502

 Score =  339 bits (171), Expect = 7e-90
 Identities = 375/442 (84%), Gaps = 1/442 (0%)
 Strand = Plus / Minus

                                                                        
Query: 177  catttcaatcacctttctggtgtaaggcacggggcaggctattaccattcagggctgcat 236
            ||||||||||| ||||||| ||||| ||||| |  || |||||||||||||| || ||||
Sbjct: 1265 catttcaatcatctttctgatgtaaagcacgagctagactattaccattcagtgcggcat 1206

                                                                        
Query: 237  ggtacactctcttctccgctaacccaagatctgagagaatcaaactcccctccactgcca 296
            ||||||||| ||||||||| | |||||| ||||| ||||||||  | |||||||||||||
Sbjct: 1205 ggtacactcgcttctccgccagcccaaggtctgaaagaatcaagtttccctccactgcca 1146

                                                                        
Query: 297  ttaatttccgtacattgtctgcgtagagcttgggatcatctttttcttgctcagaaggat 356
            | | |||||||||||||| ||| |||||||| |||||||| |||||||||||||||||||
Sbjct: 1145 tcagtttccgtacattgtttgcatagagcttaggatcatccttttcttgctcagaaggat 1086

                                                                        
Query: 357  agtacacaggcaaatgcacaacctctagatgattcacaaattgacaaaggagcagaaata 416
            |||| || || ||  | || |||||||| | ||| ||||||||||| || ||||||||||
Sbjct: 1085 agtaaactggtaagcggaccacctctaggtaatttacaaattgacagagcagcagaaata 1026

                                                                        
Query: 417  catggcgtgccccatccatggagtcccatgctggactgaatctcttgtaagggtatctta 476
            |||| ||||||||   |||||| |||||||||| | | ||||| |||||||| ||||| |
Sbjct: 1025 catgacgtgcccctgacatggaatcccatgctgcattaaatcttttgtaaggatatctca 966

                                                                        
Query: 477  aaatgactggttgtactggtgctcttgcgagaaaggctcctgtcttgaatggaagaagat 536
            ||||||||||||| ||||||||  |||| ||||| || ||||| ||||||||||| ||||
Sbjct: 965  aaatgactggttgaactggtgcctttgcaagaaaagcacctgttttgaatggaaggagat 906

                                                                        
Query: 537  aatccccgtttgtagtttgtgccctcangaaagagcaacatcatcggagaatctttttgt 596
            ||||||| ||||||| ||||||||||| | ||||| | |||||| || | || ||| |||
Sbjct: 905  aatccccatttgtag-ttgtgccctcagggaagagtagcatcattggtgcatttttctgt 847

                                  
Query: 597  tgatgagctcgctggattcttt 618
            |||||||| || ||||||||||
Sbjct: 846  tgatgagcacgatggattcttt 825
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>dbj|AK060514.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-019-F05, full
            insert sequence
          Length = 1500

 Score =  305 bits (154), Expect = 9e-80
 Identities = 372/443 (83%), Gaps = 4/443 (0%)
 Strand = Plus / Minus

                                                                        
Query: 177  catttcaatcacctttctggtgtaaggcacggggcaggctatta---ccattcagggctg 233
            ||||||||||| ||||||| ||||| ||||| || || ||||||   |||||||  || |
Sbjct: 1269 catttcaatcatctttctgatgtaaagcacgaggtagactattattaccattcaatgccg 1210

                                                                        
Query: 234  catggtacactctcttctccgctaacccaagatctgagagaatcaaactcccctccactg 293
            |||||||||| | |||||| |||| ||||||||| || ||||||||  ||||||||||||
Sbjct: 1209 catggtacacacgcttctctgctagcccaagatcagaaagaatcaagttcccctccactg 1150

                                                                        
Query: 294  ccattaatttccgtacattgtctgcgtagagcttgggatcatctttttcttgctcagaag 353
            |||| |||||||||||||| | |||||| ||||| ||||| || || ||||||||||| |
Sbjct: 1149 ccatcaatttccgtacattatttgcgtacagcttaggatcttccttctcttgctcagatg 1090

                                                                        
Query: 354  gatagtacacaggcaaatgcacaacctctagatgattcacaaattgacaaaggagcagaa 413
            | || |||||||||||||| |  ||||| || | ||| ||||||||||||||||||||||
Sbjct: 1089 ggtaatacacaggcaaatggatcacctcaaggttatttacaaattgacaaaggagcagaa 1030

                                                                        
Query: 414  atacatggcgtgccccatccatggagtcccatgctggactgaatctcttgtaagggtatc 473
            ||||||| || ||||||  ||| || |||||||||||||| |||||||||||||| ||||
Sbjct: 1029 atacatgccgagccccagacatcgaatcccatgctggactaaatctcttgtaaggatatc 970

                                                                        
Query: 474  ttaaaatgactggttgtactggtgctcttgcgagaaaggctcctgtcttgaatggaagaa 533
            ||||||||||||| |  ||||||||| |||| ||||| |||||||||||||| || || |
Sbjct: 969  ttaaaatgactggcttcactggtgcttttgcaagaaatgctcctgtcttgaaagggagga 910

                                                                        
Query: 534  gataatccccgtttgtagtttgtgccctcangaaagagcaacatcatcggagaatctttt 593
            ||||||| || ||||||| ||||||| ||| | || || | |||||| |||||||  || 
Sbjct: 909  gataatcaccatttgtag-ttgtgccttcagggaaaagtagcatcattggagaattcttc 851

                                   
Query: 594  tgttgatgagctcgctggattct 616
            ||||||||||  || ||||||||
Sbjct: 850  tgttgatgagtccgttggattct 828
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>dbj|AK120022.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-186-C04, full
            insert sequence
          Length = 1727

 Score =  287 bits (145), Expect = 2e-74
 Identities = 325/384 (84%), Gaps = 1/384 (0%)
 Strand = Plus / Minus

                                                                        
Query: 233  gcatggtacactctcttctccgctaacccaagatctgagagaatcaaactcccctccact 292
            ||||||||||| | || ||| |||| ||||||||| || ||||||||  |||||||||||
Sbjct: 1373 gcatggtacacacgctcctctgctagcccaagatcagaaagaatcaagttcccctccact 1314

                                                                        
Query: 293  gccattaatttccgtacattgtctgcgtagagcttgggatcatctttttcttgctcagaa 352
            ||||| |||||||||||||| | |||||| ||||| ||||| || || ||||||||||| 
Sbjct: 1313 gccatcaatttccgtacattatttgcgtacagcttaggatcttccttctcttgctcagat 1254

                                                                        
Query: 353  ggatagtacacaggcaaatgcacaacctctagatgattcacaaattgacaaaggagcaga 412
            || || |||||||||||||| |  ||||| || | ||| |||||||||||||||||||||
Sbjct: 1253 gggtaatacacaggcaaatggatcacctcaaggttatttacaaattgacaaaggagcaga 1194

                                                                        
Query: 413  aatacatggcgtgccccatccatggagtcccatgctggactgaatctcttgtaagggtat 472
            |||||||| || ||||||  ||| || |||||||||||||| |||||||||||||| |||
Sbjct: 1193 aatacatgccgagccccagacatcgaatcccatgctggactaaatctcttgtaaggatat 1134

                                                                        
Query: 473  cttaaaatgactggttgtactggtgctcttgcgagaaaggctcctgtcttgaatggaaga 532
            |||||||||||||| |  ||||||||| |||| ||||| |||||||||||||| || || 
Sbjct: 1133 cttaaaatgactggcttcactggtgcttttgcaagaaatgctcctgtcttgaaagggagg 1074

                                                                        
Query: 533  agataatccccgtttgtagtttgtgccctcangaaagagcaacatcatcggagaatcttt 592
            |||||||| || ||||||| ||||||| ||| | || || | |||||| |||||||  ||
Sbjct: 1073 agataatcaccatttgtag-ttgtgccttcagggaaaagtagcatcattggagaattctt 1015

                                    
Query: 593  ttgttgatgagctcgctggattct 616
             ||||||||||| || ||||||||
Sbjct: 1014 ctgttgatgagcccgttggattct 991
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>gb|BT009573.1| Triticum aestivum clone wre1n.pk0027.d4:fis, full insert mRNA
           sequence
          Length = 1042

 Score =  190 bits (96), Expect = 4e-45
 Identities = 207/243 (85%), Gaps = 1/243 (0%)
 Strand = Plus / Minus

                                                                       
Query: 338 ttttcttgctcagaaggatagtacacaggcaaatgcacaacctctagatgattcacaaat 397
           ||||||||||||||||||||||| ||||||||  | || |||||||  | |||  |||||
Sbjct: 639 ttttcttgctcagaaggatagtatacaggcaagcgaaccacctctatgtaatttgcaaat 580

                                                                       
Query: 398 tgacaaaggagcagaaatacatggcgtgccccatccatggagtcccatgctggactgaat 457
           ||||| ||||||| ||| ||||| ||||||||||||||||||||||| |||||||| |||
Sbjct: 579 tgacagaggagcaaaaacacatgacgtgccccatccatggagtcccaggctggactaaat 520

                                                                       
Query: 458 ctcttgtaagggtatcttaaaatgactggttgtactggtgctcttgcgagaaaggctcct 517
           ||| ||||||| ||||| ||||| || ||||| | |||||| ||||| ||||||||||||
Sbjct: 519 ctcctgtaaggatatctcaaaattacaggttgcaatggtgcccttgcaagaaaggctcct 460

                                                                       
Query: 518 gtcttgaatggaagaagataatccccgtttgtagtttgtgccctcangaaagagcaacat 577
           ||||| ||||| ||||| |||||||| || |||| | || |||||| ||||||| || ||
Sbjct: 459 gtcttaaatgggagaaggtaatccccattcgtag-tagtaccctcaggaaagagtaagat 401

              
Query: 578 cat 580
           |||
Sbjct: 400 cat 398
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>dbj|AK102755.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033107A02, full
            insert sequence
          Length = 2522

 Score =  186 bits (94), Expect = 6e-44
 Identities = 220/261 (84%), Gaps = 1/261 (0%)
 Strand = Plus / Minus

                                                                        
Query: 320  tagagcttgggatcatctttttcttgctcagaaggatagtacacaggcaaatgcacaacc 379
            |||||||||||||| || |||||||||||||| ||  |||| ||||||||| | ||||| 
Sbjct: 2189 tagagcttgggatcttccttttcttgctcagatgggcagtatacaggcaaacgaacaact 2130

                                                                        
Query: 380  tctagatgattcacaaattgacaaaggagcagaaatacatggcgtgccccatccatggag 439
            ||||  | ||| ||||||||||| ||||||| ||| ||||||||||||||||||||||||
Sbjct: 2129 tctatgtaatttacaaattgacagaggagcaaaaagacatggcgtgccccatccatggag 2070

                                                                        
Query: 440  tcccatgctggactgaatctcttgtaagggtatcttaaaatgactggttgtactggtgct 499
            ||||| |||||||| ||  || |||| || ||||| ||||||||||| || |||||  ||
Sbjct: 2069 tcccaggctggactaaacatcgtgtacggatatctcaaaatgactggctgaactggaact 2010

                                                                        
Query: 500  cttgcgagaaaggctcctgtcttgaatggaagaagataatccccgtttgtagtttgtgcc 559
            ||||| ||||||||||||||| | ||||| ||||| |||||||| |  |||| | || ||
Sbjct: 2009 cttgcaagaaaggctcctgtcctaaatggcagaaggtaatccccatccgtag-tagtacc 1951

                                 
Query: 560  ctcangaaagagcaacatcat 580
            |||| |||| |||||||||||
Sbjct: 1950 ctcaggaaatagcaacatcat 1930
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>gb|AY111650.1| Zea mays CL15598_1 mRNA sequence
          Length = 920

 Score =  174 bits (88), Expect = 2e-40
 Identities = 268/328 (81%)
 Strand = Plus / Plus

                                                                       
Query: 225 tcagggctgcatggtacactctcttctccgctaacccaagatctgagagaatcaaactcc 284
           |||| |||||||||||||| | |||||| || | ||||| ||  || ||||  ||| | |
Sbjct: 229 tcagtgctgcatggtacacgcgcttctctgccagcccaatattagaaagaactaaattgc 288

                                                                       
Query: 285 cctccactgccattaatttccgtacattgtctgcgtagagcttgggatcatctttttctt 344
           |||||| ||| |||| ||| |  ||||| | |||||||||||| ||||| || |||||| 
Sbjct: 289 cctccattgctattagttttctgacattatttgcgtagagcttcggatcttccttttcta 348

                                                                       
Query: 345 gctcagaaggatagtacacaggcaaatgcacaacctctagatgattcacaaattgacaaa 404
           | | |||||||||||| ||||||||  | || ||||| |  ||||| | ||||||||| |
Sbjct: 349 gttgagaaggatagtatacaggcaaccggaccacctcgatgtgatttataaattgacaga 408

                                                                       
Query: 405 ggagcagaaatacatggcgtgccccatccatggagtcccatgctggactgaatctcttgt 464
           | ||||  || ||||| ||||| |||||||| || |||||||||||||| |||||| |||
Sbjct: 409 gcagcaataacacatgacgtgctccatccattgaatcccatgctggactaaatctcctgt 468

                                                                       
Query: 465 aagggtatcttaaaatgactggttgtactggtgctcttgcgagaaaggctcctgtcttga 524
           |||||||| | ||||||||||| || |||||||| | ||| ||||||||||| ||||| |
Sbjct: 469 aagggtatttcaaaatgactggctgcactggtgcacctgcaagaaaggctccagtcttaa 528

                                       
Query: 525 atggaagaagataatccccgtttgtagt 552
           |||||||||| |||||||| ||||||||
Sbjct: 529 atggaagaaggtaatccccatttgtagt 556
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>gb|AC104272.5| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1045_C06,
             complete sequence
          Length = 143130

 Score =  127 bits (64), Expect = 5e-26
 Identities = 118/136 (86%)
 Strand = Plus / Plus

                                                                         
Query: 285   cctccactgccattaatttccgtacattgtctgcgtagagcttgggatcatctttttctt 344
             ||||||||||||| |||||||||||||| | |||||| ||||| ||||| || || ||||
Sbjct: 55338 cctccactgccatcaatttccgtacattatttgcgtacagcttaggatcttccttctctt 55397

                                                                         
Query: 345   gctcagaaggatagtacacaggcaaatgcacaacctctagatgattcacaaattgacaaa 404
             ||||||| || || |||||||||||||| |  ||||| || | ||| |||||||||||||
Sbjct: 55398 gctcagatgggtaatacacaggcaaatggatcacctcaaggttatttacaaattgacaaa 55457

                             
Query: 405   ggagcagaaatacatg 420
             ||||||||||||||||
Sbjct: 55458 ggagcagaaatacatg 55473



 Score =  123 bits (62), Expect = 7e-25
 Identities = 101/114 (88%)
 Strand = Plus / Plus

                                                                         
Query: 440   tcccatgctggactgaatctcttgtaagggtatcttaaaatgactggttgtactggtgct 499
             |||||||||||||| |||||||||||||| ||||||||||||||||| |  |||||||||
Sbjct: 55891 tcccatgctggactaaatctcttgtaaggatatcttaaaatgactggcttcactggtgct 55950

                                                                   
Query: 500   cttgcgagaaaggctcctgtcttgaatggaagaagataatccccgtttgtagtt 553
              |||| ||||| |||||||||||||| || || |||||||| || |||||||||
Sbjct: 55951 tttgcaagaaatgctcctgtcttgaaagggaggagataatcaccatttgtagtt 56004



 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 88/106 (83%), Gaps = 3/106 (2%)
 Strand = Plus / Plus

                                                                         
Query: 177   catttcaatcacctttctggtgtaaggcacggggcaggctatta---ccattcagggctg 233
             ||||||||||| ||||||| ||||| ||||| || || ||||||   |||||||  || |
Sbjct: 55099 catttcaatcatctttctgatgtaaagcacgaggtagactattattaccattcaatgccg 55158

                                                           
Query: 234   catggtacactctcttctccgctaacccaagatctgagagaatcaa 279
             |||||||||| | |||||| |||| ||||||||| || ||||||||
Sbjct: 55159 catggtacacacgcttctctgctagcccaagatcagaaagaatcaa 55204
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score =  127 bits (64), Expect = 5e-26
 Identities = 118/136 (86%)
 Strand = Plus / Plus

                                                                            
Query: 285      cctccactgccattaatttccgtacattgtctgcgtagagcttgggatcatctttttctt 344
                ||||||||||||| |||||||||||||| | |||||| ||||| ||||| || || ||||
Sbjct: 16842842 cctccactgccatcaatttccgtacattatttgcgtacagcttaggatcttccttctctt 16842901

                                                                            
Query: 345      gctcagaaggatagtacacaggcaaatgcacaacctctagatgattcacaaattgacaaa 404
                ||||||| || || |||||||||||||| |  ||||| || | ||| |||||||||||||
Sbjct: 16842902 gctcagatgggtaatacacaggcaaatggatcacctcaaggttatttacaaattgacaaa 16842961

                                
Query: 405      ggagcagaaatacatg 420
                ||||||||||||||||
Sbjct: 16842962 ggagcagaaatacatg 16842977



 Score =  123 bits (62), Expect = 7e-25
 Identities = 101/114 (88%)
 Strand = Plus / Plus

                                                                            
Query: 440      tcccatgctggactgaatctcttgtaagggtatcttaaaatgactggttgtactggtgct 499
                |||||||||||||| |||||||||||||| ||||||||||||||||| |  |||||||||
Sbjct: 16843395 tcccatgctggactaaatctcttgtaaggatatcttaaaatgactggcttcactggtgct 16843454

                                                                      
Query: 500      cttgcgagaaaggctcctgtcttgaatggaagaagataatccccgtttgtagtt 553
                 |||| ||||| |||||||||||||| || || |||||||| || |||||||||
Sbjct: 16843455 tttgcaagaaatgctcctgtcttgaaagggaggagataatcaccatttgtagtt 16843508



 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 88/106 (83%), Gaps = 3/106 (2%)
 Strand = Plus / Plus

                                                                            
Query: 177      catttcaatcacctttctggtgtaaggcacggggcaggctatta---ccattcagggctg 233
                ||||||||||| ||||||| ||||| ||||| || || ||||||   |||||||  || |
Sbjct: 16842603 catttcaatcatctttctgatgtaaagcacgaggtagactattattaccattcaatgccg 16842662

                                                              
Query: 234      catggtacactctcttctccgctaacccaagatctgagagaatcaa 279
                |||||||||| | |||||| |||| ||||||||| || ||||||||
Sbjct: 16842663 catggtacacacgcttctctgctagcccaagatcagaaagaatcaa 16842708
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>gb|AY665227.1| Saimiri boliviensis transforming growth factor-beta-induced factor
           mRNA, partial cds
          Length = 708

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                  
Query: 336 ctttttcttgctcagaaggatag 358
           |||||||||||||||||||||||
Sbjct: 98  ctttttcttgctcagaaggatag 76
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>gb|AC147007.17| Medicago truncatula clone mth2-26c3, complete sequence
          Length = 122770

 Score = 44.1 bits (22), Expect = 0.54
 Identities = 79/98 (80%)
 Strand = Plus / Minus

                                                                         
Query: 434   atggagtcccatgctggactgaatctcttgtaagggtatcttaaaatgactggttgtact 493
             ||||| ||||| || || || ||||||| |||||||||| ||||||| || ||  |||||
Sbjct: 75917 atggaatcccaagcggggctaaatctctggtaagggtattttaaaattacaggaagtact 75858

                                                   
Query: 494   ggtgctcttgcgagaaaggctcctgtcttgaatggaag 531
             |||||  |||| | |||  | || ||||||||||||||
Sbjct: 75857 ggtgcctttgccaaaaaaccaccagtcttgaatggaag 75820
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>gb|AC147437.2| Gallus gallus BAC clone CH261-80L21 from chromosome unknown, complete
              sequence
          Length = 221338

 Score = 44.1 bits (22), Expect = 0.54
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 10     tttgttgctgatgtttactgaa 31
              ||||||||||||||||||||||
Sbjct: 146614 tttgttgctgatgtttactgaa 146635
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>ref|XM_459494.1| Debaryomyces hansenii CBS767 hypothetical protein (DEHA0E04620g)
           partial mRNA
          Length = 1293

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 340 ttcttgctcagaaggatagta 360
           |||||||||||||||||||||
Sbjct: 746 ttcttgctcagaaggatagta 766
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>gb|AC006316.2| Homo sapiens PAC clone RP4-672O11 from 7, complete sequence
          Length = 143369

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 135   gcaagtcactcaactgtcagt 155
             |||||||||||||||||||||
Sbjct: 18180 gcaagtcactcaactgtcagt 18200
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>gb|AC127314.4| Mus musculus BAC clone RP23-217N4 from chromosome 18, complete sequence
          Length = 232320

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 426   ccccatccatggagtcccatg 446
             |||||||||||||||||||||
Sbjct: 25008 ccccatccatggagtcccatg 25028
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>gb|BC090585.1| Xenopus tropicalis MGC69392 protein, mRNA (cDNA clone MGC:69392
            IMAGE:5335334), complete cds
          Length = 4198

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 114  accttctatttattgttacaa 134
            |||||||||||||||||||||
Sbjct: 3997 accttctatttattgttacaa 3977
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>gb|AC126071.5| Rattus norvegicus 10 BAC CH230-209B21 (Children's Hospital Oakland
              Research Institute) complete sequence
          Length = 227741

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 507    gaaaggctcctgtcttgaatggaag 531
              ||||||||| |||||||||||||||
Sbjct: 202168 gaaaggctcttgtcttgaatggaag 202144
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>ref|NM_001030377.1| Xenopus tropicalis MGC69392 protein (MGC69392), mRNA
          Length = 4198

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 114  accttctatttattgttacaa 134
            |||||||||||||||||||||
Sbjct: 3997 accttctatttattgttacaa 3977
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>emb|CR382137.1| Debaryomyces hansenii chromosome E of strain CBS767 of Debaryomyces
              hansenii
          Length = 2037969

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 340    ttcttgctcagaaggatagta 360
              |||||||||||||||||||||
Sbjct: 331672 ttcttgctcagaaggatagta 331692
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>gb|AC163347.4| Mus musculus BAC clone RP23-259F13 from chromosome 18, complete sequence
          Length = 184836

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 426    ccccatccatggagtcccatg 446
              |||||||||||||||||||||
Sbjct: 151900 ccccatccatggagtcccatg 151920
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>gb|AC147653.5| Pan troglodytes BAC clone RP43-145M20 from chromosome 7, complete
              sequence
          Length = 192464

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 135    gcaagtcactcaactgtcagt 155
              |||||||||||||||||||||
Sbjct: 126013 gcaagtcactcaactgtcagt 126033
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>gb|AC127185.3| Rattus norvegicus  BAC CH230-28E5 (Children's Hospital Oakland Research
              Institute Rat (BN/SsNHsd/MCW) BAC library) complete
              sequence
          Length = 233648

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 507    gaaaggctcctgtcttgaatggaag 531
              ||||||||| |||||||||||||||
Sbjct: 157536 gaaaggctcttgtcttgaatggaag 157560
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>gb|AC115766.9| Mus musculus chromosome 1, clone RP23-82I24, complete sequence
          Length = 225600

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 358   gtacacaggcaaatgcacaa 377
             ||||||||||||||||||||
Sbjct: 45685 gtacacaggcaaatgcacaa 45666
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>gb|AC139673.9| Mus musculus chromosome 1, clone RP23-280I2, complete sequence
          Length = 263505

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 358   gtacacaggcaaatgcacaa 377
             ||||||||||||||||||||
Sbjct: 71807 gtacacaggcaaatgcacaa 71826
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>gb|AC102596.8| Mus musculus chromosome 8, clone RP23-360N8, complete sequence
          Length = 185607

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 384    gatgattcacaaattgacaaagga 407
              ||||||||||||| ||||||||||
Sbjct: 170949 gatgattcacaaactgacaaagga 170972
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>gb|AC166541.2| Nectria haematococca clone JGIAYWI-5B17, complete sequence
          Length = 30255

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 592  tttgttgatgagctcgctgg 611
            ||||||||||||||||||||
Sbjct: 2361 tttgttgatgagctcgctgg 2380
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>gb|AC109594.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone
             OSJNBa0007P22, complete sequence
          Length = 148068

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 388   attcacaaattgacaaagga 407
             ||||||||||||||||||||
Sbjct: 93000 attcacaaattgacaaagga 93019
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>emb|AL365179.30| Human DNA sequence from clone RP13-34C21 on chromosome Xq24-25 Contains a
              chromobox homolog 1 (HP1 beta homolog Drosophila) (CBX1)
              pseudogene and a CpG island, complete sequence
          Length = 180851

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 99     ccatgtaacacacccacctt 118
              ||||||||||||||||||||
Sbjct: 130802 ccatgtaacacacccacctt 130821
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>emb|AL359633.15| Human DNA sequence from clone RP11-795J1 on chromosome 6 Contains the
             5' end of the DSCR1L1 gene for Down syndrome critical
             region gene 1-like 1 (MCIP2 ZAKI-4), three novel genes and
             a CpG island, complete sequence
          Length = 199200

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 66    tagcagggtatattcacaat 85
             ||||||||||||||||||||
Sbjct: 53903 tagcagggtatattcacaat 53884
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>gb|AC153538.10| Mus musculus 10 BAC RP23-136I11 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 210649

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 107    cacacccaccttctatttat 126
              ||||||||||||||||||||
Sbjct: 168119 cacacccaccttctatttat 168138
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>gb|AC153946.10| Mus musculus 10 BAC RP24-416M20 (Roswell Park Cancer Institute
             (C57BL/6J Male) Mouse BAC Library) complete sequence
          Length = 151904

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 176   acatttcaatcacctttctg 195
             ||||||||||||||||||||
Sbjct: 53032 acatttcaatcacctttctg 53013
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>emb|BX548012.11| Zebrafish DNA sequence from clone DKEY-271O4 in linkage group 18,
             complete sequence
          Length = 154557

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 271   gagaatcaaactcccctcca 290
             ||||||||||||||||||||
Sbjct: 85284 gagaatcaaactcccctcca 85303
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 388      attcacaaattgacaaagga 407
                ||||||||||||||||||||
Sbjct: 22359816 attcacaaattgacaaagga 22359797
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
               sequence
          Length = 43261740

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 232     tgcatggtacactctcttct 251
               ||||||||||||||||||||
Sbjct: 7038957 tgcatggtacactctcttct 7038976
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>dbj|AP003434.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0452F10
          Length = 145120

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 232   tgcatggtacactctcttct 251
             ||||||||||||||||||||
Sbjct: 26537 tgcatggtacactctcttct 26556
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>gb|AC079042.31| Mus musculus strain C57BL/6J chromosome 3 clone rp23-313f7, complete
             sequence
          Length = 197424

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 399   gacaaaggagcagaaatacatggc 422
             ||||| ||||||||||||||||||
Sbjct: 22478 gacaatggagcagaaatacatggc 22501
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>gb|AC140442.4| Mus musculus BAC clone RP24-106P1 from 12, complete sequence
          Length = 153574

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 504   cgagaaaggctcctgtcttgaatg 527
             ||||||||||| ||||||||||||
Sbjct: 49846 cgagaaaggctactgtcttgaatg 49823
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>emb|BX005202.14| Zebrafish DNA sequence from clone DKEY-224N5 in linkage group 13,
              complete sequence
          Length = 220733

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 263    agatctgagagaatcaaact 282
              ||||||||||||||||||||
Sbjct: 169644 agatctgagagaatcaaact 169625
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>emb|BX255967.4| Zebrafish DNA sequence from clone CH211-191G22 in linkage group 7,
             complete sequence
          Length = 146969

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 263   agatctgagagaatcaaact 282
             ||||||||||||||||||||
Sbjct: 30122 agatctgagagaatcaaact 30103
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>emb|Z71684.1|SCYNR069C S.cerevisiae chromosome XIV reading frame ORF YNR069c
          Length = 4489

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 48   ttgttttctacagtgaaata 67
            ||||||||||||||||||||
Sbjct: 1064 ttgttttctacagtgaaata 1083
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 388      attcacaaattgacaaagga 407
                ||||||||||||||||||||
Sbjct: 22669727 attcacaaattgacaaagga 22669708
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>gb|AC163040.5| Mus musculus BAC clone RP23-71C23 from chromosome 12, complete sequence
          Length = 235086

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 504    cgagaaaggctcctgtcttgaatg 527
              ||||||||||| ||||||||||||
Sbjct: 218643 cgagaaaggctactgtcttgaatg 218620
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>gb|AC163223.15| Mus musculus chromosome 8, clone RP24-334B10, complete sequence
          Length = 157069

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 384   gatgattcacaaattgacaaagga 407
             ||||||||||||| ||||||||||
Sbjct: 12256 gatgattcacaaactgacaaagga 12279
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>emb|AL626771.9| Mouse DNA sequence from clone RP23-281O10 on chromosome 4, complete
             sequence
          Length = 185594

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 329   ggatcatctttttcttgctc 348
             ||||||||||||||||||||
Sbjct: 44158 ggatcatctttttcttgctc 44177
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>emb|AL596456.15| Mouse DNA sequence from clone RP23-353K20 on chromosome 11, complete
              sequence
          Length = 228428

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 359    tacacaggcaaatgcacaac 378
              ||||||||||||||||||||
Sbjct: 169022 tacacaggcaaatgcacaac 169041
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>emb|AL713865.10| Mouse DNA sequence from clone RP23-451D4 on chromosome 4, complete
             sequence
          Length = 172962

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 329   ggatcatctttttcttgctc 348
             ||||||||||||||||||||
Sbjct: 38693 ggatcatctttttcttgctc 38712
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>gb|AY067803.1| Schmidtea mediterranea clone HB.18.4h unknown mRNA sequence
          Length = 619

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 394 aaattgacaaaggagcagaaatac 417
           |||||||||||||||||| |||||
Sbjct: 255 aaattgacaaaggagcagcaatac 278
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>emb|AL671877.15| Mouse DNA sequence from clone RP23-214E3 on chromosome 3, complete
             sequence
          Length = 146015

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 399   gacaaaggagcagaaatacatggc 422
             ||||| ||||||||||||||||||
Sbjct: 82065 gacaatggagcagaaatacatggc 82042


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,607,742
Number of Sequences: 3902068
Number of extensions: 5607742
Number of successful extensions: 103459
Number of sequences better than 10.0: 47
Number of HSP's better than 10.0 without gapping: 46
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 103252
Number of HSP's gapped (non-prelim): 199
length of query: 620
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 597
effective length of database: 17,143,297,704
effective search space: 10234548729288
effective search space used: 10234548729288
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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