ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags26i15
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_470113.1| Oryza sativa (japonica cultivar-group), mRNA 210 4e-51
2gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 210 4e-51
3dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 210 4e-51
4gb|AC133007.4| Oryza sativa chromosome 3 BAC OSJNBa0094J08 genom... 210 4e-51
5dbj|AK071479.1| Oryza sativa (japonica cultivar-group) cDNA clon... 210 4e-51
6gb|AC121363.2| Oryza sativa (japonica cultivar-group) chromosome... 76 2e-10
7dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 76 2e-10
8dbj|AK071031.1| Oryza sativa (japonica cultivar-group) cDNA clon... 76 2e-10
9ref|XM_470112.1| Oryza sativa (japonica cultivar-group), mRNA 74 6e-10
10dbj|AK104541.1| Oryza sativa (japonica cultivar-group) cDNA clon... 74 6e-10
11dbj|AK065071.1| Oryza sativa (japonica cultivar-group) cDNA clon... 74 6e-10
12dbj|AK061407.1| Oryza sativa (japonica cultivar-group) cDNA clon... 74 6e-10
13gb|AY108866.1| Zea mays PCO116267 mRNA sequence 74 6e-10
14gb|BT018101.1| Zea mays clone EL01N0553B02.c mRNA sequence 58 4e-05
15gb|AY111273.1| Zea mays CL33564_1 mRNA sequence 54 6e-04
16gb|AC137634.3| Oryza sativa (japonica cultivar-group) chromosome... 50 0.009
17dbj|AK099139.1| Oryza sativa (japonica cultivar-group) cDNA clon... 50 0.009
18dbj|AK070365.1| Oryza sativa (japonica cultivar-group) cDNA clon... 50 0.009
19dbj|AK064880.1| Oryza sativa (japonica cultivar-group) cDNA clon... 50 0.009
20dbj|AK060829.1| Oryza sativa (japonica cultivar-group) cDNA clon... 50 0.009
21ref|NM_185574.1| Oryza sativa (japonica cultivar-group), mRNA 48 0.035
22gb|AY596531.1| Saccharum officinarum clone SCVPRZ2041G02, comple... 48 0.035
23dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 48 0.035
24dbj|AK119589.1| Oryza sativa (japonica cultivar-group) cDNA clon... 48 0.035
25dbj|AK108401.1| Oryza sativa (japonica cultivar-group) cDNA clon... 48 0.035
26dbj|AP004333.3| Oryza sativa (japonica cultivar-group) genomic D... 48 0.035
27dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 46 0.14
28dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 46 0.14
29emb|BX841981.1|CNS09Y2Z Arabidopsis thaliana Full-length cDNA Co... 46 0.14
30dbj|AK065582.1| Oryza sativa (japonica cultivar-group) cDNA clon... 46 0.14
31dbj|AK060755.1| Oryza sativa (japonica cultivar-group) cDNA clon... 46 0.14
32gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 46 0.14
33gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 46 0.14
34emb|BX000494.2|CNS08CDK Oryza sativa chromosome 12, . BAC OSJNBa... 46 0.14
35emb|BX000497.1|CNS08CDN Oryza sativa chromosome 11, . BAC OSJNBa... 46 0.14
36ref|XM_479393.1| Oryza sativa (japonica cultivar-group), mRNA 44 0.54
37gb|AC132463.3| Mus musculus BAC clone RP23-42M5 from chromosome ... 44 0.54
38gb|CP000088.1| Thermobifida fusca YX, complete genome 44 0.54
39dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.54
40dbj|AP005182.5| Oryza sativa (japonica cultivar-group) genomic D... 44 0.54
41dbj|AP005707.3| Oryza sativa (japonica cultivar-group) genomic D... 44 0.54
42emb|CT025667.9| Mouse DNA sequence from clone RP23-227F4 on chro... 44 0.54
43emb|CR450734.11| Zebrafish DNA sequence from clone DKEY-53N24 in... 44 0.54
44gb|AC121364.2| Oryza sativa (japonica cultivar-group) chromosome... 42 2.1
45gb|AC166937.2| Mus musculus BAC clone RP24-121A12 from chromosom... 42 2.1
46gb|AC127250.3| Mus musculus BAC clone RP24-482H23 from chromosom... 42 2.1
47gb|AC112677.8| Mus musculus chromosome 3, clone RP23-176J23, com... 42 2.1
48gb|AC152410.6| Mus musculus BAC clone RP24-290C21 from chromosom... 42 2.1
49dbj|AK065359.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 2.1
50dbj|AK063646.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 2.1
51gb|AC164108.2| Mus musculus BAC clone RP24-96K15 from chromosome... 42 2.1
52gb|AC163390.2| Mus musculus chromosome 1, clone RP24-300C19, com... 40 8.5
53ref|XM_470109.1| Oryza sativa (japonica cultivar-group), mRNA 40 8.5
54ref|XM_468039.1| Oryza sativa (japonica cultivar-group), mRNA 40 8.5
55gb|AC102334.10| Mus musculus chromosome 15, clone RP24-544N15, c... 40 8.5
56gb|AC124332.9| Mus musculus chromosome 1, clone RP24-497F17, com... 40 8.5
57gb|AC123837.5| Mus musculus BAC clone RP23-385F8 from chromosome... 40 8.5
58gb|AE009328.1| Agrobacterium tumefaciens str. C58 linear chromos... 40 8.5
59gb|AE008286.1| Agrobacterium tumefaciens str. C58 linear chromos... 40 8.5
60gb|CP000117.1| Anabaena variabilis ATCC 29413 chromosome, comple... 40 8.5
61emb|CR450685.13| Zebrafish DNA sequence from clone DKEY-83K24 in... 40 8.5
62gb|AC125122.4| Mus musculus BAC clone RP24-269O4 from chromosome... 40 8.5
63gb|AC120055.5| Homo sapiens chromosome 18, clone CTD-2362J14, co... 40 8.5
64gb|AC122807.3| Mus musculus BAC clone RP23-297H3 from 8, complet... 40 8.5
65gb|AC004850.3| Homo sapiens PAC clone RP4-665C4 from 7, complete... 40 8.5
66emb|CR660452.2|CNS0F8KQ Tetraodon nigroviridis full-length cDNA 40 8.5
67gb|AC155261.3| Mus musculus BAC clone RP24-66D10 from chromosome... 40 8.5
68emb|AL645799.5| Mouse DNA sequence from clone RP23-459O24 on chr... 40 8.5
69gb|AF411804.1| Lycopersicon esculentum BAC clone Clemson_ID 47I1... 40 8.5
70gb|CP000240.1| Synechococcus sp. JA-2-3B'a(2-13), complete genome 40 8.5
71gb|AC103676.2| Homo sapiens chromosome 18, clone CTD-3223E7, com... 40 8.5
72gb|AC091555.6| Homo sapiens chromosome 18, clone CTD-2387I11, co... 40 8.5
73gb|AC151986.4| Mus musculus BAC clone RP23-365E22 from chromosom... 40 8.5
74dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.5
75gb|AC010907.10| Homo sapiens BAC clone RP11-568H24 from 2, compl... 40 8.5
76dbj|AP002485.2| Oryza sativa (japonica cultivar-group) genomic D... 40 8.5
77dbj|AP004853.3| Oryza sativa (japonica cultivar-group) genomic D... 40 8.5
78dbj|AP004068.3| Oryza sativa (japonica cultivar-group) genomic D... 40 8.5
79dbj|AK111450.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 8.5
80emb|AJ307662.1|OSA307662 Oryza sativa genomic DNA fragment, chro... 40 8.5 
>ref|XM_470113.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2012

 Score =  210 bits (106), Expect = 4e-51
 Identities = 172/194 (88%)
 Strand = Plus / Minus

                                                                        
Query: 417  tgctcagggaaagaagagcttcgcgtagagcagctcgttccaggtgtcctggagtcctgg 476
            |||||| |||||||| ||||| | |||||||||||| ||||| ||||||||||| |||||
Sbjct: 1329 tgctcaaggaaagaacagcttggagtagagcagctcattccatgtgtcctggagacctgg 1270

                                                                        
Query: 477  gaggcaccaatgggtgcagtccgcgtagctcttaaggttcgcaatctgctccggggtcag 536
            |||||||||||| ||||| ||||||||||||||  ||||||| |||||||||||||| ||
Sbjct: 1269 gaggcaccaatgcgtgcaatccgcgtagctcttcgggttcgcgatctgctccggggttag 1210

                                                                        
Query: 537  cggattccattgcttcttgtatatctgggtatgtgcgtctttgcggtactcagacagctg 596
            ||| ||||| ||||||||||||||||| || || || |||||||||||||| || |||||
Sbjct: 1209 cgggttccactgcttcttgtatatctgagtgtgagcatctttgcggtactcggaaagctg 1150

                          
Query: 597  tgtgatgttgacga 610
             |||||||||||||
Sbjct: 1149 ggtgatgttgacga 1136
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  210 bits (106), Expect = 4e-51
 Identities = 172/194 (88%)
 Strand = Plus / Plus

                                                                            
Query: 417      tgctcagggaaagaagagcttcgcgtagagcagctcgttccaggtgtcctggagtcctgg 476
                |||||| |||||||| ||||| | |||||||||||| ||||| ||||||||||| |||||
Sbjct: 34017031 tgctcaaggaaagaacagcttggagtagagcagctcattccatgtgtcctggagacctgg 34017090

                                                                            
Query: 477      gaggcaccaatgggtgcagtccgcgtagctcttaaggttcgcaatctgctccggggtcag 536
                |||||||||||| ||||| ||||||||||||||  ||||||| |||||||||||||| ||
Sbjct: 34017091 gaggcaccaatgcgtgcaatccgcgtagctcttcgggttcgcgatctgctccggggttag 34017150

                                                                            
Query: 537      cggattccattgcttcttgtatatctgggtatgtgcgtctttgcggtactcagacagctg 596
                ||| ||||| ||||||||||||||||| || || || |||||||||||||| || |||||
Sbjct: 34017151 cgggttccactgcttcttgtatatctgagtgtgagcatctttgcggtactcggaaagctg 34017210

                              
Query: 597      tgtgatgttgacga 610
                 |||||||||||||
Sbjct: 34017211 ggtgatgttgacga 34017224



 Score = 73.8 bits (37), Expect = 6e-10
 Identities = 70/81 (86%)
 Strand = Plus / Plus

                                                                            
Query: 427      aagaagagcttcgcgtagagcagctcgttccaggtgtcctggagtcctgggaggcaccaa 486
                ||||||||||||  |||||||||||||||||| | |||  |||  || ||||||||||| 
Sbjct: 34007668 aagaagagcttccagtagagcagctcgttccacgcgtcggggacgccggggaggcaccag 34007727

                                     
Query: 487      tgggtgcagtccgcgtagctc 507
                ||||||||||| |||||||||
Sbjct: 34007728 tgggtgcagtcggcgtagctc 34007748



 Score = 50.1 bits (25), Expect = 0.009
 Identities = 55/65 (84%)
 Strand = Plus / Minus

                                                                            
Query: 439      gcgtagagcagctcgttccaggtgtcctggagtcctgggaggcaccaatgggtgcagtcc 498
                |||||||| | || ||||||||||||  |||| || ||||||||||| ||| ||||||| 
Sbjct: 10124583 gcgtagaggaactggttccaggtgtcggggaggcccgggaggcaccagtggatgcagtcg 10124524

                     
Query: 499      gcgta 503
                |||||
Sbjct: 10124523 gcgta 10124519



 Score = 42.1 bits (21), Expect = 2.1
 Identities = 45/53 (84%)
 Strand = Plus / Minus

                                                                     
Query: 448      agctcgttccaggtgtcctggagtcctgggaggcaccaatgggtgcagtccgc 500
                |||| |||||| |||||| | || || ||||||||||| ||| ||||||||||
Sbjct: 10079714 agctggttccacgtgtccggcaggccggggaggcaccagtggctgcagtccgc 10079662



 Score = 40.1 bits (20), Expect = 8.5
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                                
Query: 475      gggaggcaccaatgggtgcagtccgcgtagct 506
                ||||||||||| ||| ||||||| ||||||||
Sbjct: 33986143 gggaggcaccagtggatgcagtcggcgtagct 33986174
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score =  210 bits (106), Expect = 4e-51
 Identities = 172/194 (88%)
 Strand = Plus / Plus

                                                                            
Query: 417      tgctcagggaaagaagagcttcgcgtagagcagctcgttccaggtgtcctggagtcctgg 476
                |||||| |||||||| ||||| | |||||||||||| ||||| ||||||||||| |||||
Sbjct: 34107503 tgctcaaggaaagaacagcttggagtagagcagctcattccatgtgtcctggagacctgg 34107562

                                                                            
Query: 477      gaggcaccaatgggtgcagtccgcgtagctcttaaggttcgcaatctgctccggggtcag 536
                |||||||||||| ||||| ||||||||||||||  ||||||| |||||||||||||| ||
Sbjct: 34107563 gaggcaccaatgcgtgcaatccgcgtagctcttcgggttcgcgatctgctccggggttag 34107622

                                                                            
Query: 537      cggattccattgcttcttgtatatctgggtatgtgcgtctttgcggtactcagacagctg 596
                ||| ||||| ||||||||||||||||| || || || |||||||||||||| || |||||
Sbjct: 34107623 cgggttccactgcttcttgtatatctgagtgtgagcatctttgcggtactcggaaagctg 34107682

                              
Query: 597      tgtgatgttgacga 610
                 |||||||||||||
Sbjct: 34107683 ggtgatgttgacga 34107696



 Score = 73.8 bits (37), Expect = 6e-10
 Identities = 70/81 (86%)
 Strand = Plus / Plus

                                                                            
Query: 427      aagaagagcttcgcgtagagcagctcgttccaggtgtcctggagtcctgggaggcaccaa 486
                ||||||||||||  |||||||||||||||||| | |||  |||  || ||||||||||| 
Sbjct: 34098140 aagaagagcttccagtagagcagctcgttccacgcgtcggggacgccggggaggcaccag 34098199

                                     
Query: 487      tgggtgcagtccgcgtagctc 507
                ||||||||||| |||||||||
Sbjct: 34098200 tgggtgcagtcggcgtagctc 34098220



 Score = 50.1 bits (25), Expect = 0.009
 Identities = 55/65 (84%)
 Strand = Plus / Minus

                                                                            
Query: 439      gcgtagagcagctcgttccaggtgtcctggagtcctgggaggcaccaatgggtgcagtcc 498
                |||||||| | || ||||||||||||  |||| || ||||||||||| ||| ||||||| 
Sbjct: 10122704 gcgtagaggaactggttccaggtgtcggggaggcccgggaggcaccagtggatgcagtcg 10122645

                     
Query: 499      gcgta 503
                |||||
Sbjct: 10122644 gcgta 10122640



 Score = 42.1 bits (21), Expect = 2.1
 Identities = 45/53 (84%)
 Strand = Plus / Minus

                                                                     
Query: 448      agctcgttccaggtgtcctggagtcctgggaggcaccaatgggtgcagtccgc 500
                |||| |||||| |||||| | || || ||||||||||| ||| ||||||||||
Sbjct: 10077835 agctggttccacgtgtccggcaggccggggaggcaccagtggctgcagtccgc 10077783



 Score = 40.1 bits (20), Expect = 8.5
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                                
Query: 475      gggaggcaccaatgggtgcagtccgcgtagct 506
                ||||||||||| ||| ||||||| ||||||||
Sbjct: 34076615 gggaggcaccagtggatgcagtcggcgtagct 34076646
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>gb|AC133007.4| Oryza sativa chromosome 3 BAC OSJNBa0094J08 genomic sequence, complete
             sequence
          Length = 172337

 Score =  210 bits (106), Expect = 4e-51
 Identities = 172/194 (88%)
 Strand = Plus / Minus

                                                                         
Query: 417   tgctcagggaaagaagagcttcgcgtagagcagctcgttccaggtgtcctggagtcctgg 476
             |||||| |||||||| ||||| | |||||||||||| ||||| ||||||||||| |||||
Sbjct: 40660 tgctcaaggaaagaacagcttggagtagagcagctcattccatgtgtcctggagacctgg 40601

                                                                         
Query: 477   gaggcaccaatgggtgcagtccgcgtagctcttaaggttcgcaatctgctccggggtcag 536
             |||||||||||| ||||| ||||||||||||||  ||||||| |||||||||||||| ||
Sbjct: 40600 gaggcaccaatgcgtgcaatccgcgtagctcttcgggttcgcgatctgctccggggttag 40541

                                                                         
Query: 537   cggattccattgcttcttgtatatctgggtatgtgcgtctttgcggtactcagacagctg 596
             ||| ||||| ||||||||||||||||| || || || |||||||||||||| || |||||
Sbjct: 40540 cgggttccactgcttcttgtatatctgagtgtgagcatctttgcggtactcggaaagctg 40481

                           
Query: 597   tgtgatgttgacga 610
              |||||||||||||
Sbjct: 40480 ggtgatgttgacga 40467



 Score = 73.8 bits (37), Expect = 6e-10
 Identities = 70/81 (86%)
 Strand = Plus / Minus

                                                                         
Query: 427   aagaagagcttcgcgtagagcagctcgttccaggtgtcctggagtcctgggaggcaccaa 486
             ||||||||||||  |||||||||||||||||| | |||  |||  || ||||||||||| 
Sbjct: 50023 aagaagagcttccagtagagcagctcgttccacgcgtcggggacgccggggaggcaccag 49964

                                  
Query: 487   tgggtgcagtccgcgtagctc 507
             ||||||||||| |||||||||
Sbjct: 49963 tgggtgcagtcggcgtagctc 49943



 Score = 40.1 bits (20), Expect = 8.5
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                             
Query: 475   gggaggcaccaatgggtgcagtccgcgtagct 506
             ||||||||||| ||| ||||||| ||||||||
Sbjct: 71548 gggaggcaccagtggatgcagtcggcgtagct 71517
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>dbj|AK071479.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023093O16, full
            insert sequence
          Length = 2028

 Score =  210 bits (106), Expect = 4e-51
 Identities = 172/194 (88%)
 Strand = Plus / Minus

                                                                        
Query: 417  tgctcagggaaagaagagcttcgcgtagagcagctcgttccaggtgtcctggagtcctgg 476
            |||||| |||||||| ||||| | |||||||||||| ||||| ||||||||||| |||||
Sbjct: 1629 tgctcaaggaaagaacagcttggagtagagcagctcattccatgtgtcctggagacctgg 1570

                                                                        
Query: 477  gaggcaccaatgggtgcagtccgcgtagctcttaaggttcgcaatctgctccggggtcag 536
            |||||||||||| ||||| ||||||||||||||  ||||||| |||||||||||||| ||
Sbjct: 1569 gaggcaccaatgcgtgcaatccgcgtagctcttcgggttcgcgatctgctccggggttag 1510

                                                                        
Query: 537  cggattccattgcttcttgtatatctgggtatgtgcgtctttgcggtactcagacagctg 596
            ||| ||||| ||||||||||||||||| || || || |||||||||||||| || |||||
Sbjct: 1509 cgggttccactgcttcttgtatatctgagtgtgagcatctttgcggtactcggaaagctg 1450

                          
Query: 597  tgtgatgttgacga 610
             |||||||||||||
Sbjct: 1449 ggtgatgttgacga 1436
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>gb|AC121363.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone
             OSJNBa0036C12, complete sequence
          Length = 145517

 Score = 75.8 bits (38), Expect = 2e-10
 Identities = 107/130 (82%)
 Strand = Plus / Plus

                                                                         
Query: 428   agaagagcttcgcgtagagcagctcgttccaggtgtcctggagtcctgggaggcaccaat 487
             |||||||||| | |||||| ||||||||||| |||||||| || || ||||||||||| |
Sbjct: 86239 agaagagcttggtgtagaggagctcgttccacgtgtcctgcaggccggggaggcaccagt 86298

                                                                         
Query: 488   gggtgcagtccgcgtagctcttaaggttcgcaatctgctccggggtcagcggattccatt 547
             ||  |||||| |||||| ||||  |||  || | ||||||||| ||| ||||  |||| |
Sbjct: 86299 ggacgcagtcggcgtaggtcttggggtcggcgagctgctccggcgtcggcggcgtccact 86358

                       
Query: 548   gcttcttgta 557
             ||||||||||
Sbjct: 86359 gcttcttgta 86368
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 75.8 bits (38), Expect = 2e-10
 Identities = 107/130 (82%)
 Strand = Plus / Plus

                                                                            
Query: 428      agaagagcttcgcgtagagcagctcgttccaggtgtcctggagtcctgggaggcaccaat 487
                |||||||||| | |||||| ||||||||||| |||||||| || || ||||||||||| |
Sbjct: 16762129 agaagagcttggtgtagaggagctcgttccacgtgtcctgcaggccggggaggcaccagt 16762188

                                                                            
Query: 488      gggtgcagtccgcgtagctcttaaggttcgcaatctgctccggggtcagcggattccatt 547
                ||  |||||| |||||| ||||  |||  || | ||||||||| ||| ||||  |||| |
Sbjct: 16762189 ggacgcagtcggcgtaggtcttggggtcggcgagctgctccggcgtcggcggcgtccact 16762248

                          
Query: 548      gcttcttgta 557
                ||||||||||
Sbjct: 16762249 gcttcttgta 16762258



 Score = 42.1 bits (21), Expect = 2.1
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                             
Query: 475      gggaggcaccaatgggtgcagtccgcgta 503
                ||||||||||| ||| |||||||||||||
Sbjct: 22936297 gggaggcaccagtggatgcagtccgcgta 22936325
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>dbj|AK071031.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023076I22, full
            insert sequence
          Length = 1551

 Score = 75.8 bits (38), Expect = 2e-10
 Identities = 107/130 (82%)
 Strand = Plus / Minus

                                                                        
Query: 428  agaagagcttcgcgtagagcagctcgttccaggtgtcctggagtcctgggaggcaccaat 487
            |||||||||| | |||||| ||||||||||| |||||||| || || ||||||||||| |
Sbjct: 1390 agaagagcttggtgtagaggagctcgttccacgtgtcctgcaggccggggaggcaccagt 1331

                                                                        
Query: 488  gggtgcagtccgcgtagctcttaaggttcgcaatctgctccggggtcagcggattccatt 547
            ||  |||||| |||||| ||||  |||  || | ||||||||| ||| ||||  |||| |
Sbjct: 1330 ggacgcagtcggcgtaggtcttggggtcggcgagctgctccggcgtcggcggcgtccact 1271

                      
Query: 548  gcttcttgta 557
            ||||||||||
Sbjct: 1270 gcttcttgta 1261
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>ref|XM_470112.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1454

 Score = 73.8 bits (37), Expect = 6e-10
 Identities = 70/81 (86%)
 Strand = Plus / Minus

                                                                        
Query: 427  aagaagagcttcgcgtagagcagctcgttccaggtgtcctggagtcctgggaggcaccaa 486
            ||||||||||||  |||||||||||||||||| | |||  |||  || ||||||||||| 
Sbjct: 1196 aagaagagcttccagtagagcagctcgttccacgcgtcggggacgccggggaggcaccag 1137

                                 
Query: 487  tgggtgcagtccgcgtagctc 507
            ||||||||||| |||||||||
Sbjct: 1136 tgggtgcagtcggcgtagctc 1116
to top
>dbj|AK104541.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-305-A10, full
            insert sequence
          Length = 1392

 Score = 73.8 bits (37), Expect = 6e-10
 Identities = 70/81 (86%)
 Strand = Plus / Minus

                                                                        
Query: 427  aagaagagcttcgcgtagagcagctcgttccaggtgtcctggagtcctgggaggcaccaa 486
            ||||||||||||  |||||||||||||||||| | |||  |||  || ||||||||||| 
Sbjct: 1181 aagaagagcttccagtagagcagctcgttccacgcgtcggggacgccggggaggcaccag 1122

                                 
Query: 487  tgggtgcagtccgcgtagctc 507
            ||||||||||| |||||||||
Sbjct: 1121 tgggtgcagtcggcgtagctc 1101
to top
>dbj|AK065071.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001K07, full
            insert sequence
          Length = 3436

 Score = 73.8 bits (37), Expect = 6e-10
 Identities = 70/81 (86%)
 Strand = Plus / Minus

                                                                        
Query: 427  aagaagagcttcgcgtagagcagctcgttccaggtgtcctggagtcctgggaggcaccaa 486
            ||||||||||||  |||||||||||||||||| | |||  |||  || ||||||||||| 
Sbjct: 3164 aagaagagcttccagtagagcagctcgttccacgcgtcggggacgccggggaggcaccag 3105

                                 
Query: 487  tgggtgcagtccgcgtagctc 507
            ||||||||||| |||||||||
Sbjct: 3104 tgggtgcagtcggcgtagctc 3084
to top
>dbj|AK061407.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-306-A07, full
            insert sequence
          Length = 1437

 Score = 73.8 bits (37), Expect = 6e-10
 Identities = 70/81 (86%)
 Strand = Plus / Minus

                                                                        
Query: 427  aagaagagcttcgcgtagagcagctcgttccaggtgtcctggagtcctgggaggcaccaa 486
            ||||||||||||  |||||||||||||||||| | |||  |||  || ||||||||||| 
Sbjct: 1226 aagaagagcttccagtagagcagctcgttccacgcgtcggggacgccggggaggcaccag 1167

                                 
Query: 487  tgggtgcagtccgcgtagctc 507
            ||||||||||| |||||||||
Sbjct: 1166 tgggtgcagtcggcgtagctc 1146
to top
>gb|AY108866.1| Zea mays PCO116267 mRNA sequence
          Length = 858

 Score = 73.8 bits (37), Expect = 6e-10
 Identities = 70/81 (86%)
 Strand = Plus / Minus

                                                                       
Query: 427 aagaagagcttcgcgtagagcagctcgttccaggtgtcctggagtcctgggaggcaccaa 486
           ||||||||||||  |||||||||||||||||| |||||| | |  || ||||||||||| 
Sbjct: 534 aagaagagcttccagtagagcagctcgttccacgtgtccggcacgccggggaggcaccag 475

                                
Query: 487 tgggtgcagtccgcgtagctc 507
           || |||||||| |||||||||
Sbjct: 474 tgcgtgcagtcggcgtagctc 454
to top
>gb|BT018101.1| Zea mays clone EL01N0553B02.c mRNA sequence
          Length = 730

 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 50/57 (87%)
 Strand = Plus / Minus

                                                                    
Query: 453 gttccaggtgtcctggagtcctgggaggcaccaatgggtgcagtccgcgtagctctt 509
           ||||||||||||  ||||||| ||||||||||| ||| ||||||| |||||| ||||
Sbjct: 585 gttccaggtgtcggggagtcccgggaggcaccagtggatgcagtcggcgtaggtctt 529
to top
>gb|AY111273.1| Zea mays CL33564_1 mRNA sequence
          Length = 545

 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 33/35 (94%)
 Strand = Plus / Plus

                                              
Query: 472 cctgggaggcaccaatgggtgcagtccgcgtagct 506
           |||||||||||||| || |||||||||||||||||
Sbjct: 332 cctgggaggcaccagtgcgtgcagtccgcgtagct 366
to top
>gb|AC137634.3| Oryza sativa (japonica cultivar-group) chromosome 3 clone
             OSJNBb0078C05, complete sequence
          Length = 122116

 Score = 50.1 bits (25), Expect = 0.009
 Identities = 55/65 (84%)
 Strand = Plus / Minus

                                                                         
Query: 439   gcgtagagcagctcgttccaggtgtcctggagtcctgggaggcaccaatgggtgcagtcc 498
             |||||||| | || ||||||||||||  |||| || ||||||||||| ||| ||||||| 
Sbjct: 70204 gcgtagaggaactggttccaggtgtcggggaggcccgggaggcaccagtggatgcagtcg 70145

                  
Query: 499   gcgta 503
             |||||
Sbjct: 70144 gcgta 70140



 Score = 42.1 bits (21), Expect = 2.1
 Identities = 45/53 (84%)
 Strand = Plus / Minus

                                                                  
Query: 448   agctcgttccaggtgtcctggagtcctgggaggcaccaatgggtgcagtccgc 500
             |||| |||||| |||||| | || || ||||||||||| ||| ||||||||||
Sbjct: 25335 agctggttccacgtgtccggcaggccggggaggcaccagtggctgcagtccgc 25283
to top
>dbj|AK099139.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023050B10, full
            insert sequence
          Length = 2263

 Score = 50.1 bits (25), Expect = 0.009
 Identities = 55/65 (84%)
 Strand = Plus / Minus

                                                                        
Query: 439  gcgtagagcagctcgttccaggtgtcctggagtcctgggaggcaccaatgggtgcagtcc 498
            |||||||| | || ||||||||||||  |||| || ||||||||||| ||| ||||||| 
Sbjct: 1774 gcgtagaggaactggttccaggtgtcggggaggcccgggaggcaccagtggatgcagtcg 1715

                 
Query: 499  gcgta 503
            |||||
Sbjct: 1714 gcgta 1710
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>dbj|AK070365.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023050A10, full
            insert sequence
          Length = 2263

 Score = 50.1 bits (25), Expect = 0.009
 Identities = 55/65 (84%)
 Strand = Plus / Minus

                                                                        
Query: 439  gcgtagagcagctcgttccaggtgtcctggagtcctgggaggcaccaatgggtgcagtcc 498
            |||||||| | || ||||||||||||  |||| || ||||||||||| ||| ||||||| 
Sbjct: 1774 gcgtagaggaactggttccaggtgtcggggaggcccgggaggcaccagtggatgcagtcg 1715

                 
Query: 499  gcgta 503
            |||||
Sbjct: 1714 gcgta 1710
to top
>dbj|AK064880.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013000J23, full
            insert sequence
          Length = 1747

 Score = 50.1 bits (25), Expect = 0.009
 Identities = 55/65 (84%)
 Strand = Plus / Minus

                                                                        
Query: 439  gcgtagagcagctcgttccaggtgtcctggagtcctgggaggcaccaatgggtgcagtcc 498
            |||||||| | || ||||||||||||  |||| || ||||||||||| ||| ||||||| 
Sbjct: 1267 gcgtagaggaactggttccaggtgtcggggaggcccgggaggcaccagtggatgcagtcg 1208

                 
Query: 499  gcgta 503
            |||||
Sbjct: 1207 gcgta 1203
to top
>dbj|AK060829.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-C02, full
           insert sequence
          Length = 1189

 Score = 50.1 bits (25), Expect = 0.009
 Identities = 55/65 (84%)
 Strand = Plus / Minus

                                                                       
Query: 439 gcgtagagcagctcgttccaggtgtcctggagtcctgggaggcaccaatgggtgcagtcc 498
           |||||||| | || ||||||||||||  |||| || ||||||||||| ||| ||||||| 
Sbjct: 701 gcgtagaggaactggttccaggtgtcggggaggcccgggaggcaccagtggatgcagtcg 642

                
Query: 499 gcgta 503
           |||||
Sbjct: 641 gcgta 637
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>ref|NM_185574.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1527

 Score = 48.1 bits (24), Expect = 0.035
 Identities = 45/52 (86%)
 Strand = Plus / Minus

                                                                
Query: 453  gttccaggtgtcctggagtcctgggaggcaccaatgggtgcagtccgcgtag 504
            ||||||||||||  |||| || ||||||||||| ||| ||||||| ||||||
Sbjct: 1488 gttccaggtgtcggggaggccagggaggcaccagtggatgcagtcggcgtag 1437
to top
>gb|AY596531.1| Saccharum officinarum clone SCVPRZ2041G02, complete sequence
          Length = 1641

 Score = 48.1 bits (24), Expect = 0.035
 Identities = 30/32 (93%)
 Strand = Plus / Plus

                                           
Query: 475 gggaggcaccaatgggtgcagtccgcgtagct 506
           |||||||||||||| ||||| |||||||||||
Sbjct: 305 gggaggcaccaatgcgtgcaatccgcgtagct 336
to top
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 48.1 bits (24), Expect = 0.035
 Identities = 45/52 (86%)
 Strand = Plus / Plus

                                                                    
Query: 453      gttccaggtgtcctggagtcctgggaggcaccaatgggtgcagtccgcgtag 504
                ||||||||||||  |||| || ||||||||||| ||| ||||||| ||||||
Sbjct: 29458928 gttccaggtgtcggggaggccagggaggcaccagtggatgcagtcggcgtag 29458979



 Score = 44.1 bits (22), Expect = 0.54
 Identities = 52/62 (83%)
 Strand = Plus / Minus

                                                                            
Query: 439      gcgtagagcagctcgttccaggtgtcctggagtcctgggaggcaccaatgggtgcagtcc 498
                |||||||| ||||||||||| | |||| | |  || ||||||||||| ||| ||||||||
Sbjct: 27533757 gcgtagaggagctcgttccacgcgtccggcacgccggggaggcaccagtggctgcagtcc 27533698

                  
Query: 499      gc 500
                ||
Sbjct: 27533697 gc 27533696
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>dbj|AK119589.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-117-D01, full
            insert sequence
          Length = 2056

 Score = 48.1 bits (24), Expect = 0.035
 Identities = 45/52 (86%)
 Strand = Plus / Minus

                                                                
Query: 453  gttccaggtgtcctggagtcctgggaggcaccaatgggtgcagtccgcgtag 504
            ||||||||||||  |||| || ||||||||||| ||| ||||||| ||||||
Sbjct: 1780 gttccaggtgtcggggaggccagggaggcaccagtggatgcagtcggcgtag 1729
to top
>dbj|AK108401.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-142-G04, full
           insert sequence
          Length = 884

 Score = 48.1 bits (24), Expect = 0.035
 Identities = 45/52 (86%)
 Strand = Plus / Plus

                                                               
Query: 453 gttccaggtgtcctggagtcctgggaggcaccaatgggtgcagtccgcgtag 504
           ||||||||||||  |||| || ||||||||||| ||| ||||||| ||||||
Sbjct: 189 gttccaggtgtcggggaggccagggaggcaccagtggatgcagtcggcgtag 240
to top
>dbj|AP004333.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
              clone:P0034A04
          Length = 151263

 Score = 48.1 bits (24), Expect = 0.035
 Identities = 45/52 (86%)
 Strand = Plus / Plus

                                                                  
Query: 453    gttccaggtgtcctggagtcctgggaggcaccaatgggtgcagtccgcgtag 504
              ||||||||||||  |||| || ||||||||||| ||| ||||||| ||||||
Sbjct: 121850 gttccaggtgtcggggaggccagggaggcaccagtggatgcagtcggcgtag 121901
to top
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12,
              complete sequence
          Length = 27566993

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                                 
Query: 571    gcgtctttgcggtactcagacagctgtgtgatgtt 605
              ||||| |||||||||||||| ||||| ||||||||
Sbjct: 340111 gcgtccttgcggtactcagaaagctgggtgatgtt 340077



 Score = 44.1 bits (22), Expect = 0.54
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                            
Query: 475    gggaggcaccaatgggtgcagtccgcgtag 504
              |||||||||||||| |||||||| ||||||
Sbjct: 340207 gggaggcaccaatgcgtgcagtctgcgtag 340178
to top
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11,
              complete sequence
          Length = 28386948

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                                 
Query: 571    gcgtctttgcggtactcagacagctgtgtgatgtt 605
              ||||| |||||||||||||| ||||| ||||||||
Sbjct: 331476 gcgtccttgcggtactcagaaagctgggtgatgtt 331442



 Score = 44.1 bits (22), Expect = 0.54
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                            
Query: 475    gggaggcaccaatgggtgcagtccgcgtag 504
              |||||||||||||| |||||||| ||||||
Sbjct: 331572 gggaggcaccaatgcgtgcagtctgcgtag 331543
to top
>emb|BX841981.1|CNS09Y2Z Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTSIL88ZG01 of Silique of strain col-0 of Arabidopsis
           thaliana (thale cress)
          Length = 1080

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                      
Query: 463 tcctggagtcctgggaggcaccaatgg 489
           ||||||||||| |||||||||||||||
Sbjct: 112 tcctggagtcccgggaggcaccaatgg 138
to top
>dbj|AK065582.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013032I12, full
            insert sequence
          Length = 1789

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                               
Query: 571  gcgtctttgcggtactcagacagctgtgtgatgtt 605
            ||||| |||||||||||||| ||||| ||||||||
Sbjct: 1442 gcgtccttgcggtactcagaaagctgggtgatgtt 1408



 Score = 44.1 bits (22), Expect = 0.54
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                          
Query: 475  gggaggcaccaatgggtgcagtccgcgtag 504
            |||||||||||||| |||||||| ||||||
Sbjct: 1538 gggaggcaccaatgcgtgcagtctgcgtag 1509
to top
>dbj|AK060755.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-032-H01, full
            insert sequence
          Length = 1858

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                               
Query: 571  gcgtctttgcggtactcagacagctgtgtgatgtt 605
            ||||| |||||||||||||| ||||| ||||||||
Sbjct: 1505 gcgtccttgcggtactcagaaagctgggtgatgtt 1471



 Score = 44.1 bits (22), Expect = 0.54
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                          
Query: 475  gggaggcaccaatgggtgcagtccgcgtag 504
            |||||||||||||| |||||||| ||||||
Sbjct: 1601 gggaggcaccaatgcgtgcagtctgcgtag 1572
to top
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                                 
Query: 571    gcgtctttgcggtactcagacagctgtgtgatgtt 605
              ||||| |||||||||||||| ||||| ||||||||
Sbjct: 331476 gcgtccttgcggtactcagaaagctgggtgatgtt 331442



 Score = 44.1 bits (22), Expect = 0.54
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                            
Query: 475    gggaggcaccaatgggtgcagtccgcgtag 504
              |||||||||||||| |||||||| ||||||
Sbjct: 331572 gggaggcaccaatgcgtgcagtctgcgtag 331543
to top
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                                 
Query: 571    gcgtctttgcggtactcagacagctgtgtgatgtt 605
              ||||| |||||||||||||| ||||| ||||||||
Sbjct: 340111 gcgtccttgcggtactcagaaagctgggtgatgtt 340077



 Score = 44.1 bits (22), Expect = 0.54
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                            
Query: 475    gggaggcaccaatgggtgcagtccgcgtag 504
              |||||||||||||| |||||||| ||||||
Sbjct: 340207 gggaggcaccaatgcgtgcagtctgcgtag 340178
to top
>emb|BX000494.2|CNS08CDK Oryza sativa chromosome 12, . BAC OSJNBa0052H10 of library OSJNBa from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 152222

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                                
Query: 571   gcgtctttgcggtactcagacagctgtgtgatgtt 605
             ||||| |||||||||||||| ||||| ||||||||
Sbjct: 73162 gcgtccttgcggtactcagaaagctgggtgatgtt 73128



 Score = 44.1 bits (22), Expect = 0.54
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                           
Query: 475   gggaggcaccaatgggtgcagtccgcgtag 504
             |||||||||||||| |||||||| ||||||
Sbjct: 73258 gggaggcaccaatgcgtgcagtctgcgtag 73229
to top
>emb|BX000497.1|CNS08CDN Oryza sativa chromosome 11, . BAC OSJNBa0010K05 of library OSJNBa from
             chromosome 11 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 164143

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                                
Query: 571   gcgtctttgcggtactcagacagctgtgtgatgtt 605
             ||||| |||||||||||||| ||||| ||||||||
Sbjct: 38794 gcgtccttgcggtactcagaaagctgggtgatgtt 38760



 Score = 44.1 bits (22), Expect = 0.54
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                           
Query: 475   gggaggcaccaatgggtgcagtccgcgtag 504
             |||||||||||||| |||||||| ||||||
Sbjct: 38890 gggaggcaccaatgcgtgcagtctgcgtag 38861
to top
>ref|XM_479393.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1326

 Score = 44.1 bits (22), Expect = 0.54
 Identities = 52/62 (83%)
 Strand = Plus / Minus

                                                                        
Query: 439  gcgtagagcagctcgttccaggtgtcctggagtcctgggaggcaccaatgggtgcagtcc 498
            |||||||| ||||||||||| | |||| | |  || ||||||||||| ||| ||||||||
Sbjct: 1301 gcgtagaggagctcgttccacgcgtccggcacgccggggaggcaccagtggctgcagtcc 1242

              
Query: 499  gc 500
            ||
Sbjct: 1241 gc 1240
to top
>gb|AC132463.3| Mus musculus BAC clone RP23-42M5 from chromosome 13, complete sequence
          Length = 151340

 Score = 44.1 bits (22), Expect = 0.54
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 158    acaggcaaccacaaaacctcag 179
              ||||||||||||||||||||||
Sbjct: 133613 acaggcaaccacaaaacctcag 133634
to top
>gb|CP000088.1| Thermobifida fusca YX, complete genome
          Length = 3642249

 Score = 44.1 bits (22), Expect = 0.54
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                     
Query: 516     cgcaatctgctccggggtcagc 537
               ||||||||||||||||||||||
Sbjct: 3618405 cgcaatctgctccggggtcagc 3618426
to top
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score = 44.1 bits (22), Expect = 0.54
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                              
Query: 71       atcatgcttatgcttacaaatcatgccact 100
                |||||||||||||| |||||| ||||||||
Sbjct: 14371033 atcatgcttatgctaacaaataatgccact 14371004
to top
>dbj|AP005182.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0018C07
          Length = 141707

 Score = 44.1 bits (22), Expect = 0.54
 Identities = 52/62 (83%)
 Strand = Plus / Minus

                                                                         
Query: 439   gcgtagagcagctcgttccaggtgtcctggagtcctgggaggcaccaatgggtgcagtcc 498
             |||||||| ||||||||||| | |||| | |  || ||||||||||| ||| ||||||||
Sbjct: 97728 gcgtagaggagctcgttccacgcgtccggcacgccggggaggcaccagtggctgcagtcc 97669

               
Query: 499   gc 500
             ||
Sbjct: 97668 gc 97667
to top
>dbj|AP005707.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
             clone:P0465E03
          Length = 151206

 Score = 44.1 bits (22), Expect = 0.54
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                           
Query: 71    atcatgcttatgcttacaaatcatgccact 100
             |||||||||||||| |||||| ||||||||
Sbjct: 62836 atcatgcttatgctaacaaataatgccact 62807
to top
>emb|CT025667.9| Mouse DNA sequence from clone RP23-227F4 on chromosome 13, complete
              sequence
          Length = 206864

 Score = 44.1 bits (22), Expect = 0.54
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 158    acaggcaaccacaaaacctcag 179
              ||||||||||||||||||||||
Sbjct: 148856 acaggcaaccacaaaacctcag 148835
to top
>emb|CR450734.11| Zebrafish DNA sequence from clone DKEY-53N24 in linkage group 5,
             complete sequence
          Length = 73893

 Score = 44.1 bits (22), Expect = 0.54
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 50    gcattcatgttgaataaaagaa 71
             ||||||||||||||||||||||
Sbjct: 41606 gcattcatgttgaataaaagaa 41585
to top
>gb|AC121364.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone
             OSJNBa0052E20, complete sequence
          Length = 162434

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                          
Query: 475   gggaggcaccaatgggtgcagtccgcgta 503
             ||||||||||| ||| |||||||||||||
Sbjct: 40310 gggaggcaccagtggatgcagtccgcgta 40338
to top
>gb|AC166937.2| Mus musculus BAC clone RP24-121A12 from chromosome 10, complete sequence
          Length = 183115

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 305    aggaacttacttgggccaggtgttt 329
              ||||||||||||| |||||||||||
Sbjct: 180504 aggaacttacttgtgccaggtgttt 180528
to top
>gb|AC127250.3| Mus musculus BAC clone RP24-482H23 from chromosome 3, complete sequence
          Length = 136942

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 410   ttcctaatgctcagggaaagaagag 434
             ||||||||||||||| |||||||||
Sbjct: 33662 ttcctaatgctcaggtaaagaagag 33686
to top
>gb|AC112677.8| Mus musculus chromosome 3, clone RP23-176J23, complete sequence
          Length = 215247

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 410   ttcctaatgctcagggaaagaagag 434
             ||||||||||||||| |||||||||
Sbjct: 20841 ttcctaatgctcaggtaaagaagag 20817
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>gb|AC152410.6| Mus musculus BAC clone RP24-290C21 from chromosome 10, complete sequence
          Length = 175812

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 305    aggaacttacttgggccaggtgttt 329
              ||||||||||||| |||||||||||
Sbjct: 130396 aggaacttacttgtgccaggtgttt 130372
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>dbj|AK065359.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013007F12, full
            insert sequence
          Length = 2034

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 475  gggaggcaccaatgggtgcagtccgcgta 503
            ||||||||||| ||| |||||||||||||
Sbjct: 1462 gggaggcaccagtggatgcagtccgcgta 1434
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>dbj|AK063646.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-118-H07, full
            insert sequence
          Length = 1399

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 45/53 (84%)
 Strand = Plus / Minus

                                                                 
Query: 448  agctcgttccaggtgtcctggagtcctgggaggcaccaatgggtgcagtccgc 500
            |||| |||||| |||||| | || || ||||||||||| ||| ||||||||||
Sbjct: 1164 agctggttccacgtgtccggcaggccggggaggcaccagtggctgcagtccgc 1112
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>gb|AC164108.2| Mus musculus BAC clone RP24-96K15 from chromosome 16, complete sequence
          Length = 180800

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 556    tatatctgggtatgtgcgtct 576
              |||||||||||||||||||||
Sbjct: 113759 tatatctgggtatgtgcgtct 113779
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>gb|AC163390.2| Mus musculus chromosome 1, clone RP24-300C19, complete sequence
          Length = 180465

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 118   aaagaggaatgtggtacatt 137
             ||||||||||||||||||||
Sbjct: 55508 aaagaggaatgtggtacatt 55489
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>ref|XM_470109.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1422

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                            
Query: 475  gggaggcaccaatgggtgcagtccgcgtagct 506
            ||||||||||| ||| ||||||| ||||||||
Sbjct: 1370 gggaggcaccagtggatgcagtcggcgtagct 1339
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>ref|XM_468039.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2103

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 50/60 (83%)
 Strand = Plus / Minus

                                                                        
Query: 439  gcgtagagcagctcgttccaggtgtcctggagtcctgggaggcaccaatgggtgcagtcc 498
            |||||||| ||||| ||||||| |||  | | ||| ||||||||||| ||| ||||||||
Sbjct: 2063 gcgtagagaagctcattccaggagtcgggtactccagggaggcaccagtggctgcagtcc 2004
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>gb|AC102334.10| Mus musculus chromosome 15, clone RP24-544N15, complete sequence
          Length = 162721

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 464   cctggagtcctgggaggcac 483
             ||||||||||||||||||||
Sbjct: 83760 cctggagtcctgggaggcac 83741
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>gb|AC124332.9| Mus musculus chromosome 1, clone RP24-497F17, complete sequence
          Length = 181313

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 118    aaagaggaatgtggtacatt 137
              ||||||||||||||||||||
Sbjct: 107791 aaagaggaatgtggtacatt 107772
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>gb|AC123837.5| Mus musculus BAC clone RP23-385F8 from chromosome 7, complete sequence
          Length = 208880

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 112    acagtgaaagaggaatgtggtaca 135
              ||||||||||| ||||||||||||
Sbjct: 111336 acagtgaaagatgaatgtggtaca 111359
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>gb|AE009328.1| Agrobacterium tumefaciens str. C58 linear chromosome, section 98 of
            187 of the complete sequence
          Length = 12668

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 517  gcaatctgctccggggtcag 536
            ||||||||||||||||||||
Sbjct: 3443 gcaatctgctccggggtcag 3462
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>gb|AE008286.1| Agrobacterium tumefaciens str. C58 linear chromosome, section 90 of
            187 of the complete sequence
          Length = 9083

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 517  gcaatctgctccggggtcag 536
            ||||||||||||||||||||
Sbjct: 5641 gcaatctgctccggggtcag 5622
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>gb|CP000117.1| Anabaena variabilis ATCC 29413 chromosome, complete sequence
          Length = 6365727

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 41      cagaatttggcattcatgtt 60
               ||||||||||||||||||||
Sbjct: 4457464 cagaatttggcattcatgtt 4457445
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>emb|CR450685.13| Zebrafish DNA sequence from clone DKEY-83K24 in linkage group 8, complete
              sequence
          Length = 195473

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 50     gcattcatgttgaataaaag 69
              ||||||||||||||||||||
Sbjct: 174986 gcattcatgttgaataaaag 175005
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>gb|AC125122.4| Mus musculus BAC clone RP24-269O4 from chromosome 18, complete sequence
          Length = 173614

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 461    tgtcctggagtcctgggagg 480
              ||||||||||||||||||||
Sbjct: 155227 tgtcctggagtcctgggagg 155208
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>gb|AC120055.5| Homo sapiens chromosome 18, clone CTD-2362J14, complete sequence
          Length = 96630

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 419   ctcagggaaagaagagcttc 438
             ||||||||||||||||||||
Sbjct: 31430 ctcagggaaagaagagcttc 31449
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>gb|AC122807.3| Mus musculus BAC clone RP23-297H3 from 8, complete sequence
          Length = 210372

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 553   ttgtatatctgggtatgtgc 572
             ||||||||||||||||||||
Sbjct: 67921 ttgtatatctgggtatgtgc 67940
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>gb|AC004850.3| Homo sapiens PAC clone RP4-665C4 from 7, complete sequence
          Length = 105891

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 414   taatgctcagggaaagaaga 433
             ||||||||||||||||||||
Sbjct: 69016 taatgctcagggaaagaaga 69035
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>emb|CR660452.2|CNS0F8KQ Tetraodon nigroviridis full-length cDNA
          Length = 664

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 453 gttccaggtgtcctggagtc 472
           ||||||||||||||||||||
Sbjct: 351 gttccaggtgtcctggagtc 370
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>gb|AC155261.3| Mus musculus BAC clone RP24-66D10 from chromosome 18, complete sequence
          Length = 207400

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 461    tgtcctggagtcctgggagg 480
              ||||||||||||||||||||
Sbjct: 184983 tgtcctggagtcctgggagg 185002
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>emb|AL645799.5| Mouse DNA sequence from clone RP23-459O24 on chromosome 13, complete
             sequence
          Length = 63170

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 319   gccaggtgtttgtcctggac 338
             ||||||||||||||||||||
Sbjct: 49177 gccaggtgtttgtcctggac 49196
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>gb|AF411804.1| Lycopersicon esculentum BAC clone Clemson_ID 47I13, complete sequence
          Length = 100810

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 315   ttgggccaggtgtttgtcct 334
             ||||||||||||||||||||
Sbjct: 53330 ttgggccaggtgtttgtcct 53311
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>gb|CP000240.1| Synechococcus sp. JA-2-3B'a(2-13), complete genome
          Length = 3046682

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 522    ctgctccggggtcagcggat 541
              ||||||||||||||||||||
Sbjct: 117638 ctgctccggggtcagcggat 117657
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>gb|AC103676.2| Homo sapiens chromosome 18, clone CTD-3223E7, complete sequence
          Length = 199566

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 419    ctcagggaaagaagagcttc 438
              ||||||||||||||||||||
Sbjct: 178039 ctcagggaaagaagagcttc 178058
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>gb|AC091555.6| Homo sapiens chromosome 18, clone CTD-2387I11, complete sequence
          Length = 86914

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 419   ctcagggaaagaagagcttc 438
             ||||||||||||||||||||
Sbjct: 22199 ctcagggaaagaagagcttc 22180
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>gb|AC151986.4| Mus musculus BAC clone RP23-365E22 from chromosome 7, complete sequence
          Length = 199337

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 112   acagtgaaagaggaatgtggtaca 135
             ||||||||||| ||||||||||||
Sbjct: 26755 acagtgaaagatgaatgtggtaca 26732
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 50/60 (83%)
 Strand = Plus / Plus

                                                                            
Query: 439      gcgtagagcagctcgttccaggtgtcctggagtcctgggaggcaccaatgggtgcagtcc 498
                |||||||| ||||| ||||||| |||  | | ||| ||||||||||| ||| ||||||||
Sbjct: 32689705 gcgtagagaagctcattccaggagtcgggtactccagggaggcaccagtggctgcagtcc 32689764



 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 546      ttgcttcttgtatatctggg 565
                ||||||||||||||||||||
Sbjct: 26336480 ttgcttcttgtatatctggg 26336461
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>gb|AC010907.10| Homo sapiens BAC clone RP11-568H24 from 2, complete sequence
          Length = 139357

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 522   ctgctccggggtcagcggat 541
             ||||||||||||||||||||
Sbjct: 11565 ctgctccggggtcagcggat 11584
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>dbj|AP002485.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:P0491E01
          Length = 136150

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 546   ttgcttcttgtatatctggg 565
             ||||||||||||||||||||
Sbjct: 68832 ttgcttcttgtatatctggg 68813
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>dbj|AP004853.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1448_G06
          Length = 136823

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 50/60 (83%)
 Strand = Plus / Plus

                                                                         
Query: 439   gcgtagagcagctcgttccaggtgtcctggagtcctgggaggcaccaatgggtgcagtcc 498
             |||||||| ||||| ||||||| |||  | | ||| ||||||||||| ||| ||||||||
Sbjct: 17940 gcgtagagaagctcattccaggagtcgggtactccagggaggcaccagtggctgcagtcc 17999
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>dbj|AP004068.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
              clone:OJ1611_C08
          Length = 135386

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 50/60 (83%)
 Strand = Plus / Plus

                                                                          
Query: 439    gcgtagagcagctcgttccaggtgtcctggagtcctgggaggcaccaatgggtgcagtcc 498
              |||||||| ||||| ||||||| |||  | | ||| ||||||||||| ||| ||||||||
Sbjct: 117076 gcgtagagaagctcattccaggagtcgggtactccagggaggcaccagtggctgcagtcc 117135
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>dbj|AK111450.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-183-B10, full
            insert sequence
          Length = 1616

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                            
Query: 475  gggaggcaccaatgggtgcagtccgcgtagct 506
            ||||||||||| ||| ||||||| ||||||||
Sbjct: 1446 gggaggcaccagtggatgcagtcggcgtagct 1415
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>emb|AJ307662.1|OSA307662 Oryza sativa genomic DNA fragment, chromosome 2
          Length = 339972

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 546   ttgcttcttgtatatctggg 565
             ||||||||||||||||||||
Sbjct: 59149 ttgcttcttgtatatctggg 59130


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,178,530
Number of Sequences: 3902068
Number of extensions: 5178530
Number of successful extensions: 86546
Number of sequences better than 10.0: 80
Number of HSP's better than 10.0 without gapping: 79
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 85995
Number of HSP's gapped (non-prelim): 543
length of query: 621
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 598
effective length of database: 17,143,297,704
effective search space: 10251692026992
effective search space used: 10251692026992
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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