ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbags26i02 |
|---|---|
| Clone Library Name | barley_pub |
>RLA2A_MAIZE (P46252) 60S acidic ribosomal protein P2A (P2)| Length = 111 Score = 90.9 bits (224), Expect = 1e-18 Identities = 51/99 (51%), Positives = 57/99 (57%) Frame = -3 Query: 450 NASPSAEDLTSILESVGCEIDNEKMELMLCQVKGKDITELLAAGREKFXXXXXXXXXXXX 271 NASPSA+DLT+ILESVGCE+DNEKMEL+L Q+ GKDITEL+AAGREKF Sbjct: 14 NASPSADDLTAILESVGCEVDNEKMELLLSQLSGKDITELIAAGREKF-ASVPCGGGGVA 72 Query: 270 XXXXXXXXXXXXXXXXXXXXXXXXXXXXSDDDMGFSLFD 154 SDDDMGFSLFD Sbjct: 73 VAAAAPAAGGAAPAAEAKKEEKVEEKEESDDDMGFSLFD 111
>RLA2B_MAIZE (O24415) 60S acidic ribosomal protein P2B| Length = 113 Score = 71.6 bits (174), Expect = 8e-13 Identities = 39/99 (39%), Positives = 50/99 (50%) Frame = -3 Query: 450 NASPSAEDLTSILESVGCEIDNEKMELMLCQVKGKDITELLAAGREKFXXXXXXXXXXXX 271 N SP+A+D+ SILESVG E D EK+E +L ++K KDITE++AAGRE+ Sbjct: 15 NTSPTADDVKSILESVGAEADEEKLEFLLTELKDKDITEVIAAGRERLSSVPSGGGAIDM 74 Query: 270 XXXXXXXXXXXXXXXXXXXXXXXXXXXXSDDDMGFSLFD 154 SD+DMGFSLFD Sbjct: 75 GAPAAVAGGGAAPAEEAKKEEKVEEKEESDEDMGFSLFD 113
>RLA2_PARAR (P41099) 60S acidic ribosomal protein P2| Length = 114 Score = 67.4 bits (163), Expect = 2e-11 Identities = 39/99 (39%), Positives = 51/99 (51%) Frame = -3 Query: 450 NASPSAEDLTSILESVGCEIDNEKMELMLCQVKGKDITELLAAGREKFXXXXXXXXXXXX 271 N SP+ EDL SIL SVG + D++K+EL+L QVKGKDITEL+A+GRE+ Sbjct: 15 NTSPTDEDLKSILASVGADADDDKIELLLSQVKGKDITELIASGRERL-ASVPSGGGVAV 73 Query: 270 XXXXXXXXXXXXXXXXXXXXXXXXXXXXSDDDMGFSLFD 154 SD+++GFSLFD Sbjct: 74 AAAAGGGGGDAPAAAAEEPKKEEKSEEESDEELGFSLFD 112
>RLA2_ALTAL (P42037) 60S acidic ribosomal protein P2 (Minor allergen Alt a 5)| (Alt a 6) (Alt a VI) Length = 113 Score = 64.7 bits (156), Expect = 1e-10 Identities = 32/99 (32%), Positives = 48/99 (48%) Frame = -3 Query: 450 NASPSAEDLTSILESVGCEIDNEKMELMLCQVKGKDITELLAAGREKFXXXXXXXXXXXX 271 N SPSA D+ ++LESVG E D+++++ ++ +++GKDI EL+A+G EK Sbjct: 15 NTSPSAADVKAVLESVGIEADSDRLDKLISELEGKDINELIASGSEKLASVPSGGAGGAA 74 Query: 270 XXXXXXXXXXXXXXXXXXXXXXXXXXXXSDDDMGFSLFD 154 SD+DMGF LFD Sbjct: 75 ASGGAAAAGGSAQAEAAPEAAKEEEKEESDEDMGFGLFD 113
>RLA2A_ARATH (Q9SLF7) 60S acidic ribosomal protein P2-A| Length = 115 Score = 61.2 bits (147), Expect = 1e-09 Identities = 36/100 (36%), Positives = 49/100 (49%), Gaps = 2/100 (2%) Frame = -3 Query: 447 ASPSAEDLTSILESVGCEIDNEKMELMLCQVKGKDITELLAAGREKFXX--XXXXXXXXX 274 ASP++ D+ +IL SVG E ++ ++EL+L +VKGKD+ EL+AAGREK Sbjct: 16 ASPTSADIKTILGSVGAETEDSQIELLLKEVKGKDLAELIAAGREKLASVPSGGGGGVAV 75 Query: 273 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDDDMGFSLFD 154 SDDDMGFSLF+ Sbjct: 76 ASATSGGGGGGGASAAESKKEEKKEEKEESDDDMGFSLFE 115
>RLA4_CLAHE (P42039) 60S acidic ribosomal protein P2 (Minor allergen Cla h 4)| (Cla h IV) Length = 111 Score = 60.5 bits (145), Expect = 2e-09 Identities = 33/99 (33%), Positives = 47/99 (47%) Frame = -3 Query: 450 NASPSAEDLTSILESVGCEIDNEKMELMLCQVKGKDITELLAAGREKFXXXXXXXXXXXX 271 N+SPSAED+ ++L SVG + D E++ +L +++GKDI EL+++G EK Sbjct: 15 NSSPSAEDIKTVLSSVGIDADEERLSSLLKELEGKDINELISSGSEKL--ASVPSGGAGA 72 Query: 270 XXXXXXXXXXXXXXXXXXXXXXXXXXXXSDDDMGFSLFD 154 SDDDMGF LFD Sbjct: 73 ASAGGAAAAGGAAEAAPEAERAEEEKEESDDDMGFGLFD 111
>RLA2B_ARATH (P51407) 60S acidic ribosomal protein P2-B| Length = 115 Score = 59.3 bits (142), Expect = 4e-09 Identities = 36/100 (36%), Positives = 47/100 (47%), Gaps = 2/100 (2%) Frame = -3 Query: 447 ASPSAEDLTSILESVGCEIDNEKMELMLCQVKGKDITELLAAGREKFXX--XXXXXXXXX 274 ASP+ D+ IL SVG E ++ ++EL+L +VKGKD+ EL+AAGREK Sbjct: 16 ASPTTGDIKDILGSVGAETEDSQIELLLKEVKGKDLAELIAAGREKLASVPSGGGGGVAV 75 Query: 273 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDDDMGFSLFD 154 SDDDMGFSLF+ Sbjct: 76 ASATSGGGGGGGAPAAESKKEEKKEEKEESDDDMGFSLFE 115
>RLA3_CLAHE (P42038) 60S acidic ribosomal protein P2 (Allergen Cla h 3) (Cla h| III) Length = 111 Score = 58.9 bits (141), Expect = 6e-09 Identities = 32/99 (32%), Positives = 47/99 (47%) Frame = -3 Query: 450 NASPSAEDLTSILESVGCEIDNEKMELMLCQVKGKDITELLAAGREKFXXXXXXXXXXXX 271 N+SPSAED+ ++L SVG + D E++ +L +++GKDI EL+++G +K Sbjct: 15 NSSPSAEDIKTVLSSVGIDADEERLSSLLKELEGKDINELISSGSQKL--ASVPSGGSGA 72 Query: 270 XXXXXXXXXXXXXXXXXXXXXXXXXXXXSDDDMGFSLFD 154 SDDDMGF LFD Sbjct: 73 APSAGGAAAAGGATEAAPEAAKEEEKEESDDDMGFGLFD 111
>RLA4_CANAL (Q9HFQ4) 60S acidic ribosomal protein P2-B (CaRP2B)| Length = 111 Score = 57.8 bits (138), Expect = 1e-08 Identities = 32/99 (32%), Positives = 44/99 (44%) Frame = -3 Query: 450 NASPSAEDLTSILESVGCEIDNEKMELMLCQVKGKDITELLAAGREKFXXXXXXXXXXXX 271 N SPSA D+T++LESVG E + +++ +L ++GKD+ EL+A G K Sbjct: 15 NTSPSASDITALLESVGVEAEESRLQALLKDLEGKDLQELIAEGNTKL--ASVPSGGAAA 72 Query: 270 XXXXXXXXXXXXXXXXXXXXXXXXXXXXSDDDMGFSLFD 154 SDDDMGF LFD Sbjct: 73 GGASASTGAAAGGAAEAEEEKEEEAKEESDDDMGFGLFD 111
>RLA2_SCHPO (P08094) 60S acidic ribosomal protein P2-alpha (A2) (L40C) (L12EI)| Length = 110 Score = 57.4 bits (137), Expect = 2e-08 Identities = 32/97 (32%), Positives = 45/97 (46%) Frame = -3 Query: 444 SPSAEDLTSILESVGCEIDNEKMELMLCQVKGKDITELLAAGREKFXXXXXXXXXXXXXX 265 SPSA D+ S+L +VG E ++E++E ++ ++ GKDI EL+AAG EK Sbjct: 17 SPSASDIESVLSTVGIEAESERIETLINELNGKDIDELIAAGNEKL---ATVPTGGAASA 73 Query: 264 XXXXXXXXXXXXXXXXXXXXXXXXXXSDDDMGFSLFD 154 SD+DMGF LFD Sbjct: 74 APAAAAGGAAPAAEEAAKEEAKEEEESDEDMGFGLFD 110
>RLA2_PODAN (Q9C3Z5) 60S acidic ribosomal protein P2| Length = 111 Score = 56.2 bits (134), Expect = 4e-08 Identities = 30/98 (30%), Positives = 46/98 (46%) Frame = -3 Query: 447 ASPSAEDLTSILESVGCEIDNEKMELMLCQVKGKDITELLAAGREKFXXXXXXXXXXXXX 268 A+PSA D+ ++LESVG E D+++++ ++ +++GKD+ EL+A G K Sbjct: 16 ATPSAADVKAVLESVGIEADSDRLDKLISELEGKDVNELIAEGSSKL--ASVPSGGAGGA 73 Query: 267 XXXXXXXXXXXXXXXXXXXXXXXXXXXSDDDMGFSLFD 154 SDDDMGF LFD Sbjct: 74 AAAGGAAAAGGAAEAAPEEAKEEEKEESDDDMGFGLFD 111
>RLA4_SCHPO (P17478) 60S acidic ribosomal protein P2-beta (A4)| Length = 110 Score = 55.5 bits (132), Expect = 6e-08 Identities = 31/97 (31%), Positives = 44/97 (45%) Frame = -3 Query: 444 SPSAEDLTSILESVGCEIDNEKMELMLCQVKGKDITELLAAGREKFXXXXXXXXXXXXXX 265 SPSA D+ S+L +VG E + E++E ++ ++ GK+I EL+AAG EK Sbjct: 17 SPSASDIESVLSTVGIEAEAERVESLISELNGKNIEELIAAGNEKL---STVPSAGAVAT 73 Query: 264 XXXXXXXXXXXXXXXXXXXXXXXXXXSDDDMGFSLFD 154 SD+DMGF LFD Sbjct: 74 PAAGGAAGAEATSAAEEAKEEEAAEESDEDMGFGLFD 110
>RLA2_BRAFL (O01725) 60S acidic ribosomal protein P2| Length = 116 Score = 54.3 bits (129), Expect = 1e-07 Identities = 33/102 (32%), Positives = 46/102 (45%), Gaps = 3/102 (2%) Frame = -3 Query: 450 NASPSAEDLTSILESVGCEIDNEKMELMLCQVKGKDITELLAAGREKFX---XXXXXXXX 280 NA+PSA D+ IL SVG + ++E++ ++ ++KGKDI E++AAGR K Sbjct: 15 NANPSAGDIKKILGSVGIDAEDERLNKVIGELKGKDIEEVMAAGRGKLSSMPSGGGVAAA 74 Query: 279 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDDDMGFSLFD 154 SDDDMGF LFD Sbjct: 75 AGGGGAAAGGGGAAPAAEEKKEEKKEESEEESDDDMGFGLFD 116
>RLA2_ASPFU (Q9UUZ6) 60S acidic ribosomal protein P2 (Allergen Asp f 8) (AfP2)| Length = 111 Score = 54.3 bits (129), Expect = 1e-07 Identities = 29/99 (29%), Positives = 44/99 (44%) Frame = -3 Query: 450 NASPSAEDLTSILESVGCEIDNEKMELMLCQVKGKDITELLAAGREKFXXXXXXXXXXXX 271 N SPS+ED+ ++L SVG + D E++ ++ +++GKD+ EL+A G K Sbjct: 15 NTSPSSEDVKAVLSSVGIDADEERLNKLIAELEGKDLQELIAEGSTKL--ASVPSGGAAA 72 Query: 270 XXXXXXXXXXXXXXXXXXXXXXXXXXXXSDDDMGFSLFD 154 SD+DMGF LFD Sbjct: 73 AAPAAAGAAAGGAAAPAAEEKKEEEKEESDEDMGFGLFD 111
>RLA4_YEAST (P02400) 60S acidic ribosomal protein P2-beta (L45) (YL44C) (YPA1)| (L12EIA) Length = 110 Score = 52.0 bits (123), Expect = 7e-07 Identities = 30/100 (30%), Positives = 46/100 (46%), Gaps = 1/100 (1%) Frame = -3 Query: 450 NASPSAEDLTSILESVGCEIDNEKMELMLCQVKGK-DITELLAAGREKFXXXXXXXXXXX 274 NA+PSA D+ +++ESVG E+D ++ +L ++GK + E++A G++KF Sbjct: 15 NAAPSAADIKAVVESVGAEVDEARINELLSSLEGKGSLEEIIAEGQKKF----ATVPTGG 70 Query: 273 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDDDMGFSLFD 154 SDDDMGF LFD Sbjct: 71 ASSAAAGAAGAAAGGDAAEEEKEEEAKEESDDDMGFGLFD 110
>RLA2_FUSCU (Q8TFM9) 60S acidic ribosomal protein P2 (Allergen Fus c 1)| Length = 109 Score = 51.6 bits (122), Expect = 9e-07 Identities = 29/99 (29%), Positives = 44/99 (44%) Frame = -3 Query: 450 NASPSAEDLTSILESVGCEIDNEKMELMLCQVKGKDITELLAAGREKFXXXXXXXXXXXX 271 N SPSA D+ ++L SVG + D +++ ++ +++GKDI +L+A G EK Sbjct: 15 NTSPSAADVKAVLTSVGIDADEDRLNKLISELEGKDIQQLIAEGSEKL----ASVPSGGA 70 Query: 270 XXXXXXXXXXXXXXXXXXXXXXXXXXXXSDDDMGFSLFD 154 SD+DMGF LFD Sbjct: 71 GGASGGAAAAGGAAEEAKEEEKEEEKEESDEDMGFGLFD 109
>RLA2_DROME (P05389) 60S acidic ribosomal protein P2 (Acidic ribosomal protein| RPA1) Length = 113 Score = 51.2 bits (121), Expect = 1e-06 Identities = 28/97 (28%), Positives = 40/97 (41%) Frame = -3 Query: 444 SPSAEDLTSILESVGCEIDNEKMELMLCQVKGKDITELLAAGREKFXXXXXXXXXXXXXX 265 SP+ DL IL SVG E+D E++ ++ ++ GK I +L+ GREK Sbjct: 17 SPANSDLEKILSSVGVEVDAERLTKVIKELAGKSIDDLIKEGREKLSSMPVGGGGAVAAA 76 Query: 264 XXXXXXXXXXXXXXXXXXXXXXXXXXSDDDMGFSLFD 154 DDDMGF+LF+ Sbjct: 77 DAAPAAAAGGDKKEAKKEEKKEESESEDDDMGFALFE 113
>RLA2_HORSE (Q6X9Z5) 60S acidic ribosomal protein P2| Length = 115 Score = 51.2 bits (121), Expect = 1e-06 Identities = 29/101 (28%), Positives = 45/101 (44%), Gaps = 2/101 (1%) Frame = -3 Query: 450 NASPSAEDLTSILESVGCEIDNEKMELMLCQVKGKDITELLAAGREKFXX--XXXXXXXX 277 N SPSA+D+ IL+SVG E D+++++ ++ ++ GK+I +++A G K Sbjct: 15 NTSPSAKDIKKILDSVGIEADDDRLDKVISELNGKNIEDVIAQGIGKLASVPAGGAVAVS 74 Query: 276 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDDDMGFSLFD 154 SDDDMGF LFD Sbjct: 75 AAPGSAAPAAGSAPAAAEERKEEKKEESEESDDDMGFGLFD 115
>RLA2_RAT (P02401) 60S acidic ribosomal protein P2| Length = 115 Score = 50.8 bits (120), Expect = 2e-06 Identities = 29/101 (28%), Positives = 45/101 (44%), Gaps = 2/101 (1%) Frame = -3 Query: 450 NASPSAEDLTSILESVGCEIDNEKMELMLCQVKGKDITELLAAGREKFXX--XXXXXXXX 277 N++PSA+D+ IL+SVG E D+E++ ++ ++ GK+I +++A G K Sbjct: 15 NSNPSAKDIKKILDSVGIEADDERLNKVISELNGKNIEDVIAQGVGKLASVPAGGAVAVS 74 Query: 276 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDDDMGFSLFD 154 SDDDMGF LFD Sbjct: 75 AAPGSAAPAAGSAPAAAEEKKDEKKEESEESDDDMGFGLFD 115
>RLA2_MOUSE (P99027) 60S acidic ribosomal protein P2| Length = 115 Score = 50.8 bits (120), Expect = 2e-06 Identities = 29/101 (28%), Positives = 45/101 (44%), Gaps = 2/101 (1%) Frame = -3 Query: 450 NASPSAEDLTSILESVGCEIDNEKMELMLCQVKGKDITELLAAGREKFXX--XXXXXXXX 277 N+SPSA+D+ IL+SVG E D++++ ++ ++ GK+I +++A G K Sbjct: 15 NSSPSAKDIKKILDSVGIEADDDRLNKVISELNGKNIEDVIAQGVGKLASVPAGGAVAVS 74 Query: 276 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDDDMGFSLFD 154 SDDDMGF LFD Sbjct: 75 AAPGSAAPAAGSAPAAAEEKKDEKKEESEESDDDMGFGLFD 115
>RLA2_HUMAN (P05387) 60S acidic ribosomal protein P2 (NY-REN-44 antigen)| Length = 115 Score = 50.8 bits (120), Expect = 2e-06 Identities = 29/101 (28%), Positives = 45/101 (44%), Gaps = 2/101 (1%) Frame = -3 Query: 450 NASPSAEDLTSILESVGCEIDNEKMELMLCQVKGKDITELLAAGREKFXX--XXXXXXXX 277 N+SPSA+D+ IL+SVG E D++++ ++ ++ GK+I +++A G K Sbjct: 15 NSSPSAKDIKKILDSVGIEADDDRLNKVISELNGKNIEDVIAQGIGKLASVPAGGAVAVS 74 Query: 276 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDDDMGFSLFD 154 SDDDMGF LFD Sbjct: 75 AAPGSAAPAAGSAPAAAEEKKDEKKEESEESDDDMGFGLFD 115
>RLA2_CANAL (Q9HFQ5) 60S acidic ribosomal protein P2-A (CaRP2A)| Length = 108 Score = 50.4 bits (119), Expect = 2e-06 Identities = 28/99 (28%), Positives = 42/99 (42%) Frame = -3 Query: 450 NASPSAEDLTSILESVGCEIDNEKMELMLCQVKGKDITELLAAGREKFXXXXXXXXXXXX 271 NA+PSA D+ ++L + E++ EK+E ++ + GK++ EL+A G EK Sbjct: 15 NATPSAADVKAVLSAADIEVEEEKVEKLISESDGKNVEELIAEGNEKL-----SSVPSGA 69 Query: 270 XXXXXXXXXXXXXXXXXXXXXXXXXXXXSDDDMGFSLFD 154 SDDDM F LFD Sbjct: 70 PAAAAGGASAAAGGEATEEAAEEEAAEESDDDMSFGLFD 108
>RLA2_BOVIN (P42899) 60S acidic ribosomal protein P2| Length = 115 Score = 50.4 bits (119), Expect = 2e-06 Identities = 29/101 (28%), Positives = 45/101 (44%), Gaps = 2/101 (1%) Frame = -3 Query: 450 NASPSAEDLTSILESVGCEIDNEKMELMLCQVKGKDITELLAAGREKFXX--XXXXXXXX 277 N+SPSA+D+ IL+SVG E D++++ ++ ++ GK+I +++A G K Sbjct: 15 NSSPSAKDIKKILDSVGIEADDDRLNKVISELHGKNIEDVIAQGIGKLASVPAGGAVAVS 74 Query: 276 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDDDMGFSLFD 154 SDDDMGF LFD Sbjct: 75 AAPGSAAPAAGSAPAAAEEKKEEKKEESEESDDDMGFGLFD 115
>RLA2_YEAST (P05319) 60S acidic ribosomal protein P2-alpha (A2) (L44) (L12EIB)| Length = 106 Score = 50.1 bits (118), Expect = 3e-06 Identities = 30/97 (30%), Positives = 41/97 (42%) Frame = -3 Query: 444 SPSAEDLTSILESVGCEIDNEKMELMLCQVKGKDITELLAAGREKFXXXXXXXXXXXXXX 265 +P A + +ILESVG EI++EK+ +L ++GK + EL+ G EK Sbjct: 16 TPDATKIKAILESVGIEIEDEKVSSVLSALEGKSVDELITEGNEKL------AAVPAAGP 69 Query: 264 XXXXXXXXXXXXXXXXXXXXXXXXXXSDDDMGFSLFD 154 SDDDMGF LFD Sbjct: 70 ASAGGAAAASGDAAAEEEKEEEAAEESDDDMGFGLFD 106
>RLA2_RHOGU (Q96UQ7) 60S acidic ribosomal protein P2 (Acyl carrier protein)| Length = 110 Score = 50.1 bits (118), Expect = 3e-06 Identities = 27/99 (27%), Positives = 43/99 (43%) Frame = -3 Query: 450 NASPSAEDLTSILESVGCEIDNEKMELMLCQVKGKDITELLAAGREKFXXXXXXXXXXXX 271 N SPSAED+ +L + + D E++ +++ +++GKD+ E++A G +K Sbjct: 15 NTSPSAEDVKKVLAAADIQADEERLSVLIKELEGKDVNEVIAEGSKKL---ASVPSGGAA 71 Query: 270 XXXXXXXXXXXXXXXXXXXXXXXXXXXXSDDDMGFSLFD 154 SDDDMGF LFD Sbjct: 72 PAAAAGGAAAGGAAEEKAEDKPAEKDEESDDDMGFGLFD 110
>RLA2_BRUMA (P90703) 60S acidic ribosomal protein P2| Length = 114 Score = 48.1 bits (113), Expect = 1e-05 Identities = 28/99 (28%), Positives = 39/99 (39%) Frame = -3 Query: 450 NASPSAEDLTSILESVGCEIDNEKMELMLCQVKGKDITELLAAGREKFXXXXXXXXXXXX 271 N SPSA+D+ +L SVG ++D E ++ + GK I E++ AG K Sbjct: 16 NKSPSAKDIEDVLGSVGLDVDMEDANKVVSALSGKSIDEVITAGLAKVSSVPSDAAVSAI 75 Query: 270 XXXXXXXXXXXXXXXXXXXXXXXXXXXXSDDDMGFSLFD 154 SD+DMGF LFD Sbjct: 76 APVVSATPTDALQAGSKKGETKEGPKEESDEDMGFGLFD 114
>RLA2_CRYST (O61463) 60S acidic ribosomal protein P2| Length = 110 Score = 47.4 bits (111), Expect = 2e-05 Identities = 28/99 (28%), Positives = 43/99 (43%) Frame = -3 Query: 450 NASPSAEDLTSILESVGCEIDNEKMELMLCQVKGKDITELLAAGREKFXXXXXXXXXXXX 271 N PS DL IL+SVG E++ +++ ++ ++KGK++ E++A G +K Sbjct: 15 NEKPSESDLKKILDSVGIEVEKDQLTKVINELKGKNLDEVIAEGEKKL---ASVPSGGGV 71 Query: 270 XXXXXXXXXXXXXXXXXXXXXXXXXXXXSDDDMGFSLFD 154 SDDDMGF LFD Sbjct: 72 AAAAPAAGGGGADPAEAKEEKKEEPEEESDDDMGFGLFD 110
>RLA2_PIG (Q29315) 60S acidic ribosomal protein P2| Length = 115 Score = 47.4 bits (111), Expect = 2e-05 Identities = 30/101 (29%), Positives = 44/101 (43%), Gaps = 2/101 (1%) Frame = -3 Query: 450 NASPSAEDLTSILESVGCEIDNEKMELMLCQVKGKDITELLAAGREKFXX--XXXXXXXX 277 N SPSA+D+ L+SVG E D +++ ++ ++ GK+I +++A G K Sbjct: 15 NTSPSAKDIKKXLDSVGIEADXDRLNKVISELNGKNIEDVIAQGIGKLASVPSGGAXAVA 74 Query: 276 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDDDMGFSLFD 154 SDDDMGF LFD Sbjct: 75 AAPGSXAPAAGSAPAAAEEKKEEKKEESEESDDDMGFGLFD 115
>RLA2_ARTSA (P02399) 60S acidic ribosomal protein P2 (EL12)| Length = 111 Score = 46.2 bits (108), Expect = 4e-05 Identities = 27/99 (27%), Positives = 40/99 (40%) Frame = -3 Query: 450 NASPSAEDLTSILESVGCEIDNEKMELMLCQVKGKDITELLAAGREKFXXXXXXXXXXXX 271 NA PS D+ IL SVG E + +++ ++ ++KGKD+ L+A G+ K Sbjct: 15 NADPSTADIEKILSSVGIECNPSQLQKVMNELKGKDLEALIAEGQTKL--ASMPTGGAPA 72 Query: 270 XXXXXXXXXXXXXXXXXXXXXXXXXXXXSDDDMGFSLFD 154 D+DMGF LFD Sbjct: 73 AAAGGAATAPAAEAKEAKKEEKKEESEEEDEDMGFGLFD 111
>RLA2_CAEEL (O01504) 60S acidic ribosomal protein P2| Length = 107 Score = 46.2 bits (108), Expect = 4e-05 Identities = 30/99 (30%), Positives = 42/99 (42%) Frame = -3 Query: 450 NASPSAEDLTSILESVGCEIDNEKMELMLCQVKGKDITELLAAGREKFXXXXXXXXXXXX 271 NASPSA+D+ +LE+ G + D E ++ +KGK I+E++A G+ K Sbjct: 15 NASPSAQDVLKVLEAGGLDCDMENANSVVDALKGKTISEVIAQGKVKL------SSVPSG 68 Query: 270 XXXXXXXXXXXXXXXXXXXXXXXXXXXXSDDDMGFSLFD 154 SDDDMGF LFD Sbjct: 69 GSAPAAAAPSGGAAPKAEEKKKEEPKEESDDDMGFGLFD 107
>RLA2_EUPRA (Q9GPU2) 60S acidic ribosomal protein P2| Length = 113 Score = 45.8 bits (107), Expect = 5e-05 Identities = 19/47 (40%), Positives = 34/47 (72%) Frame = -3 Query: 450 NASPSAEDLTSILESVGCEIDNEKMELMLCQVKGKDITELLAAGREK 310 N+SPSA+D+ +L+SVG + + +K++ +L ++GK + EL+ AG K Sbjct: 15 NSSPSADDVKKVLKSVGVDSEQDKLDALLKNLEGKQLHELIEAGSSK 61
>RLA2_TRYBB (P51408) 60S acidic ribosomal protein P2| Length = 107 Score = 45.8 bits (107), Expect = 5e-05 Identities = 25/97 (25%), Positives = 39/97 (40%) Frame = -3 Query: 444 SPSAEDLTSILESVGCEIDNEKMELMLCQVKGKDITELLAAGREKFXXXXXXXXXXXXXX 265 +PS D+ ++L++ G +D+ ++E +L +V+GKD L A G+ K Sbjct: 16 TPSKADVEAVLKAAGVPVDSSRVEELLSEVEGKDFDALCAEGKAKL-----VGGVTAGGA 70 Query: 264 XXXXXXXXXXXXXXXXXXXXXXXXXXSDDDMGFSLFD 154 DDDMGF LFD Sbjct: 71 APSGGAAAHAAAASAPAAAAAEAEEEDDDDMGFGLFD 107
>RLA2_DICDI (P22683) 60S acidic ribosomal protein P2| Length = 105 Score = 45.1 bits (105), Expect = 8e-05 Identities = 27/99 (27%), Positives = 41/99 (41%) Frame = -3 Query: 450 NASPSAEDLTSILESVGCEIDNEKMELMLCQVKGKDITELLAAGREKFXXXXXXXXXXXX 271 + + +A +T IL+SVG E+D ++E + ++ GKD+ L+AAG+ K Sbjct: 12 SGNANAASVTKILQSVGVEVDAARVESVCKELDGKDVQALIAAGKSK-----VGSVAAAA 66 Query: 270 XXXXXXXXXXXXXXXXXXXXXXXXXXXXSDDDMGFSLFD 154 SDDDMG LFD Sbjct: 67 APAAATSAAPAAAAAAPAKKVVEEKKEESDDDMGMGLFD 105
>RLA2_BABBO (P27055) 60S acidic ribosomal protein P2 (L12EI)| Length = 112 Score = 45.1 bits (105), Expect = 8e-05 Identities = 27/99 (27%), Positives = 41/99 (41%) Frame = -3 Query: 450 NASPSAEDLTSILESVGCEIDNEKMELMLCQVKGKDITELLAAGREKFXXXXXXXXXXXX 271 N +PS +DL IL++VG ++D E ++ ++ + GK + E +AAG K Sbjct: 17 NENPSVDDLKKILDAVGSDVDEECLQGLVDSMSGKTVHETIAAGMTKL---QSMPAGGAA 73 Query: 270 XXXXXXXXXXXXXXXXXXXXXXXXXXXXSDDDMGFSLFD 154 +DDMGFSLFD Sbjct: 74 MPAAAAGGAPAAAEDKAEAKKPEAEPEEEEDDMGFSLFD 112
>RLA2_EIMTE (Q967Y9) 60S acidic ribosomal protein P2| Length = 114 Score = 42.0 bits (97), Expect = 7e-04 Identities = 25/100 (25%), Positives = 42/100 (42%), Gaps = 1/100 (1%) Frame = -3 Query: 450 NASPSAEDLTSILESVGCEIDNEKMELMLCQVKGKDITELLAAGREKFXXXXXXXXXXXX 271 N +P+A D++ +LE VG E++ E ++ ++ ++GK E+++AG EK Sbjct: 15 NEAPTAADVSRVLEPVGAEVNPEVLKTLIDAMQGKAAHEVISAGLEKLQKVPCGGGAAAA 74 Query: 270 XXXXXXXXXXXXXXXXXXXXXXXXXXXXSDD-DMGFSLFD 154 +D DMG SLFD Sbjct: 75 APAAAAAAGGGDSSSAAKETKKEEPEEEEEDGDMGLSLFD 114
>RLA3_LEIIN (Q06382) 60S acidic ribosomal protein P2-2| Length = 111 Score = 40.8 bits (94), Expect = 0.002 Identities = 24/98 (24%), Positives = 37/98 (37%) Frame = -3 Query: 447 ASPSAEDLTSILESVGCEIDNEKMELMLCQVKGKDITELLAAGREKFXXXXXXXXXXXXX 268 ASPS D+ +I ++V ++D + ++ V G+D+ L+A G K Sbjct: 17 ASPSQADVEAICKAVHIDVDQATLAFVMESVTGRDVATLIAEGAAKM---SAMPAASSGA 73 Query: 267 XXXXXXXXXXXXXXXXXXXXXXXXXXXSDDDMGFSLFD 154 +DDDMGF LFD Sbjct: 74 AAGVTASAAGDAAPAAAAAKKDEPEEEADDDMGFGLFD 111
>RLA2_LEIIN (Q06383) 60S acidic ribosomal protein P2-1| Length = 106 Score = 39.3 bits (90), Expect = 0.005 Identities = 23/97 (23%), Positives = 38/97 (39%) Frame = -3 Query: 444 SPSAEDLTSILESVGCEIDNEKMELMLCQVKGKDITELLAAGREKFXXXXXXXXXXXXXX 265 +PS D+ ++L++ G +D +++ + +V+GK L+A GR K Sbjct: 16 TPSKADVQAVLKAAGVAVDASRVDAVFQEVEGKSFDALVAEGRTKL------VGSGSAAP 69 Query: 264 XXXXXXXXXXXXXXXXXXXXXXXXXXSDDDMGFSLFD 154 +DDDMGF LFD Sbjct: 70 AGAVSTAGAGAGAVAEAKKEEPEEEEADDDMGFGLFD 106
>RLA2_LEIBR (O44010) 60S acidic ribosomal protein P2 (Acidic ribosomal P2 beta| protein) (P2B-protein) Length = 105 Score = 39.3 bits (90), Expect = 0.005 Identities = 21/97 (21%), Positives = 36/97 (37%) Frame = -3 Query: 444 SPSAEDLTSILESVGCEIDNEKMELMLCQVKGKDITELLAAGREKFXXXXXXXXXXXXXX 265 +P D+ ++L++ G I+ +++ + +++GK EL+ GR K Sbjct: 16 TPCKADVQAVLKAAGVAIELSRVDALFQELEGKSFDELMTEGRSKLVGSGSAAPAAAAST 75 Query: 264 XXXXXXXXXXXXXXXXXXXXXXXXXXSDDDMGFSLFD 154 DDDMGF LFD Sbjct: 76 AGAAVAAAADAKKEASEEEA-------DDDMGFGLFD 105
>RLA2_TAESO (P50879) 60S acidic ribosomal protein P2| Length = 121 Score = 39.3 bits (90), Expect = 0.005 Identities = 17/44 (38%), Positives = 29/44 (65%) Frame = -3 Query: 441 PSAEDLTSILESVGCEIDNEKMELMLCQVKGKDITELLAAGREK 310 P D+ +IL SVG E + E+ +L + Q+ GK++ +L+ G+EK Sbjct: 18 PQESDIKNILSSVGVECEQERAKLGVDQLHGKNVRDLINTGKEK 61
>RLA3_TRYCR (P26795) 60S acidic ribosomal protein P2-B (P2B)| Length = 112 Score = 38.1 bits (87), Expect = 0.010 Identities = 20/97 (20%), Positives = 36/97 (37%) Frame = -3 Query: 444 SPSAEDLTSILESVGCEIDNEKMELMLCQVKGKDITELLAAGREKFXXXXXXXXXXXXXX 265 +P A D+ +I ++ G E++++ + ++ + G+ + L+A G K Sbjct: 18 TPGAADVEAICKACGIEVESDALSFVMESIAGRSVATLVAEGAAKMSAVAVSAAPAAGDA 77 Query: 264 XXXXXXXXXXXXXXXXXXXXXXXXXXSDDDMGFSLFD 154 DDDMGF LFD Sbjct: 78 AAPAAAAGGAAAPAAADAKKEEEEE--DDDMGFGLFD 112
>RLA2_LEIDO (O43940) 60S acidic ribosomal protein P2 (Acidic ribosomal protein| 1) Length = 105 Score = 36.6 bits (83), Expect = 0.030 Identities = 21/97 (21%), Positives = 37/97 (38%) Frame = -3 Query: 444 SPSAEDLTSILESVGCEIDNEKMELMLCQVKGKDITELLAAGREKFXXXXXXXXXXXXXX 265 +PS + ++L++ G +D +++ + +++GK L+A GR K Sbjct: 16 TPSKAAVEAVLKAAGVAVDASRVDAVFQELEGKSFDALVAEGRAKL-------VGSGSAA 68 Query: 264 XXXXXXXXXXXXXXXXXXXXXXXXXXSDDDMGFSLFD 154 +DDDMGF LFD Sbjct: 69 PAAAASTAAAAAAVVAEAKKEEPEEEADDDMGFGLFD 105
>RLA2_TRYCR (P23632) 60S acidic ribosomal protein P2-A (P) (P-JL5) (L12E)| Length = 107 Score = 35.8 bits (81), Expect = 0.052 Identities = 19/97 (19%), Positives = 33/97 (34%) Frame = -3 Query: 444 SPSAEDLTSILESVGCEIDNEKMELMLCQVKGKDITELLAAGREKFXXXXXXXXXXXXXX 265 +PS + ++L++ G +D +++ + + GKD + G+ K Sbjct: 16 TPSKSAVEAVLKAAGVPVDPSRVDALFAEFAGKDFDTVCTEGKSKL-----VGGVTRPNA 70 Query: 264 XXXXXXXXXXXXXXXXXXXXXXXXXXSDDDMGFSLFD 154 DDDMGF LFD Sbjct: 71 ATASAPTAAAAASSGAAAPAAAAEEEEDDDMGFGLFD 107
>RLA2_RABIT (P19943) 60S acidic ribosomal protein P2 (Acidic phosphoprotein P3)| (Fragment) Length = 44 Score = 33.5 bits (75), Expect = 0.26 Identities = 13/29 (44%), Positives = 23/29 (79%) Frame = -3 Query: 450 NASPSAEDLTSILESVGCEIDNEKMELML 364 N+SPSA+D+ IL+SVG E D++++ ++ Sbjct: 15 NSSPSAKDIKKILDSVGIEADDDRLNKVI 43
>RLA2_WHEAT (P05390) 60S acidic ribosomal protein P2 (Ribosomal protein 'A')| (Fragment) Length = 42 Score = 33.1 bits (74), Expect = 0.33 Identities = 14/28 (50%), Positives = 20/28 (71%) Frame = -3 Query: 450 NASPSAEDLTSILESVGCEIDNEKMELM 367 N+SPSA D+ IL +VG E + EK+E + Sbjct: 15 NSSPSAADVKDILNAVGAEANEEKLEFL 42
>RLA2_PLAFA (O00806) 60S acidic ribosomal protein P2| Length = 112 Score = 32.7 bits (73), Expect = 0.44 Identities = 13/47 (27%), Positives = 29/47 (61%) Frame = -3 Query: 450 NASPSAEDLTSILESVGCEIDNEKMELMLCQVKGKDITELLAAGREK 310 N +PS +++ ++L +V ++++E + + +KGK EL+ G +K Sbjct: 17 NENPSTKEVKNVLGAVNADVEDEVLNNFIDSLKGKSCHELITDGLKK 63
>HLX1_HUMAN (Q14774) Homeobox protein HLX1 (Homeobox protein HB24)| Length = 488 Score = 30.8 bits (68), Expect = 1.7 Identities = 17/41 (41%), Positives = 20/41 (48%), Gaps = 6/41 (14%) Frame = +3 Query: 282 HHH------QMEPQQTSPCQQPRAR*CPCPSLGTA*VPSSH 386 HHH Q +PQQ P PRA P+ GT VP+ H Sbjct: 121 HHHPQQQQQQQQPQQQQPPPPPRAGALQPPASGTRVVPNPH 161
>RLA3_CANAL (Q9HFQ6) 60S acidic ribosomal protein P1-B (CaRP1B)| Length = 108 Score = 30.8 bits (68), Expect = 1.7 Identities = 21/95 (22%), Positives = 32/95 (33%) Frame = -3 Query: 438 SAEDLTSILESVGCEIDNEKMELMLCQVKGKDITELLAAGREKFXXXXXXXXXXXXXXXX 259 ++E L +I ++ G +D ++ V+GK++ ELL Sbjct: 22 TSEKLLAITKAAGANVDQVWADVFAKAVEGKNLKELL--------FSFAAAAPASGAAAG 73 Query: 258 XXXXXXXXXXXXXXXXXXXXXXXXSDDDMGFSLFD 154 SDDDMGF LFD Sbjct: 74 SASGAAAGGEAAAEEAAEEEAAEESDDDMGFGLFD 108
>VID21_NEUCR (Q7SBU6) Chromatin modification-related protein vid-21| Length = 2189 Score = 30.4 bits (67), Expect = 2.2 Identities = 18/46 (39%), Positives = 22/46 (47%), Gaps = 2/46 (4%) Frame = +3 Query: 285 HHQMEPQQTSPCQQPRAR*CPCPSLGTA*VP--SSHCQFHNQQTQE 416 H Q +PQQ QQ R + P P L A P S Q + QTQ+ Sbjct: 1929 HQQQQPQQAQQTQQQRQQVHPAPQLPQAQPPQHSHQAQAQHPQTQQ 1974
>CAC1D_RAT (P27732) Voltage-dependent L-type calcium channel alpha-1D subunit| (Voltage-gated calcium channel alpha subunit Cav1.3) (Calcium channel, L type, alpha-1 polypeptide, isoform 2) (RAT brain class D) (RBD) Length = 2203 Score = 28.9 bits (63), Expect = 6.3 Identities = 7/10 (70%), Positives = 9/10 (90%) Frame = -2 Query: 307 CCGSIWWWWR 278 CCGS+W WW+ Sbjct: 488 CCGSLWCWWK 497
>RL12_METTH (P05394) 50S ribosomal protein L12P ('A' type)|
Length = 101
Score = 28.9 bits (63), Expect = 6.3
Identities = 10/35 (28%), Positives = 24/35 (68%)
Frame = -3
Query: 432 EDLTSILESVGCEIDNEKMELMLCQVKGKDITELL 328
E++ S+LE+ G E+D+ +++ ++ ++ DI E +
Sbjct: 20 ENVKSVLEAAGAEVDDARVKALIAALEDVDIEEAM 54
>SFR15_RAT (Q63627) Splicing factor, arginine/serine-rich 15 (CTD-binding| SR-like protein RA4) (Fragment) Length = 1048 Score = 28.5 bits (62), Expect = 8.2 Identities = 16/50 (32%), Positives = 22/50 (44%) Frame = +3 Query: 279 RHHHQMEPQQTSPCQQPRAR*CPCPSLGTA*VPSSHCQFHNQQTQEWMSG 428 + Q + QQ P QQ + + P PS A QF N Q++ SG Sbjct: 847 QQQQQQQQQQQPPPQQSQTQQQPAPSQQPAPAQQQPQQFRNDNRQQFNSG 896 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 51,229,129 Number of Sequences: 219361 Number of extensions: 754902 Number of successful extensions: 1951 Number of sequences better than 10.0: 51 Number of HSP's better than 10.0 without gapping: 1878 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1916 length of database: 80,573,946 effective HSP length: 102 effective length of database: 58,199,124 effective search space used: 2793557952 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)