| Clone Name | rbags26g22 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | YKU2_YEAST (P36042) Hypothetical 21.2 kDa protein in TOR2-MNN4 i... | 30 | 6.9 |
|---|
>YKU2_YEAST (P36042) Hypothetical 21.2 kDa protein in TOR2-MNN4 intergenic| region Length = 193 Score = 29.6 bits (65), Expect = 6.9 Identities = 24/70 (34%), Positives = 32/70 (45%) Frame = +2 Query: 329 PQLVSPPPICTAMLSIDSEVPLL*PQLDRLECIPALPXMSSTGRASLLRSGDAWVILPSF 508 P SP P ++ L + S LL P L LP S LL ++ +LPS Sbjct: 115 PSSFSPLPPASSFLLLPSFSSLLLPSFSSLP----LPSFSF-----LLLPSSSFPLLPSS 165 Query: 509 SSNMPPTSKS 538 SS +PP+S S Sbjct: 166 SSPLPPSSSS 175 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 84,221,235 Number of Sequences: 219361 Number of extensions: 1664978 Number of successful extensions: 3921 Number of sequences better than 10.0: 1 Number of HSP's better than 10.0 without gapping: 3848 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3921 length of database: 80,573,946 effective HSP length: 107 effective length of database: 57,102,319 effective search space used: 5196311029 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)