| Clone Name | rbags26g20 |
|---|---|
| Clone Library Name | barley_pub |
>M4K2_MOUSE (Q61161) Mitogen-activated protein kinase kinase kinase kinase 2| (EC 2.7.11.1) (MAPK/ERK kinase kinase kinase 2) (MEK kinase kinase 2) (MEKKK 2) (Germinal center kinase) (GCK) (Rab8-interacting protein) Length = 821 Score = 31.2 bits (69), Expect = 1.9 Identities = 14/27 (51%), Positives = 16/27 (59%) Frame = +3 Query: 333 GRPVLSPTSWHWLLFPPLQERQSCHGL 413 G P L PT+W L +ER SCHGL Sbjct: 437 GSPALLPTAWATLKQQEDRERSSCHGL 463
>TRPG_THEMA (Q08654) Anthranilate synthase component II (EC 4.1.3.27)| [Includes: Glutamine amidotransferase; Anthranilate phosphoribosyltransferase (EC 2.4.2.18)] Length = 589 Score = 30.8 bits (68), Expect = 2.5 Identities = 20/88 (22%), Positives = 35/88 (39%) Frame = +1 Query: 115 YSPLVYRRLGFVSSLHAD*CVLAMNTASARDRVILKRSENNNPDMLAAALAVGSPVLLNC 294 Y VY + ++ + D C + + D + ++ E NP + + G P Sbjct: 53 YDSFVYNIVQYIGEVEPD-CEIEV---FRNDEITIEEIERKNPTHIVISPGPGRPEEAGI 108 Query: 295 KEDLLRHTRAALMVGQCCLPPHGIGYFF 378 D++RH + + CL IGY F Sbjct: 109 SVDVVRHFSGKVPILGVCLGHQVIGYAF 136
>GBLP_HYDAT (Q25189) Guanine nucleotide-binding protein beta subunit-like| protein (Receptor of activated protein kinase C) (RACK) Length = 317 Score = 29.3 bits (64), Expect = 7.2 Identities = 18/70 (25%), Positives = 29/70 (41%), Gaps = 4/70 (5%) Frame = -1 Query: 375 KVANAMRWETTLADH----EGGPRVPEKILFAVKQYWTADSKSRR*HVWIIVLASLQDNS 208 K NAM W+ H +GG V + F+ +YW + +W + + S+ D Sbjct: 212 KDGNAMLWDLNEGKHLYTLDGG-NVINALCFSPNRYWLCAATGPMIKIWDLEMKSVVDEL 270 Query: 207 VPGTGSVHCK 178 PG + K Sbjct: 271 KPGVIGISTK 280
>STP2_BOVIN (P26377) Nuclear transition protein 2 (TP-2) (TP2)| Length = 131 Score = 28.9 bits (63), Expect = 9.3 Identities = 22/78 (28%), Positives = 28/78 (35%) Frame = +3 Query: 174 CTCNEHCQCQGQSYPEEKREQ*SRHVSGGSCCRQSSIA*LQRGSSQAHEGRPHGRPVLSP 353 C+C++HCQ SR S R SS S H+GR +P Sbjct: 29 CSCSQHCQ--------------SRSRSRSCRSRSSSRRPRSHRSPTGHQGRARPQPSSEA 74 Query: 354 TSWHWLLFPPLQERQSCH 407 H L PP+ R H Sbjct: 75 PQTHHAL-PPVSSRPVTH 91
>AP1B1_SCHPO (O43079) AP-1 complex subunit beta-1 (Beta(1)-adaptin) (Clathrin| assembly protein large beta-1 chain) (Clathrin assembly protein complex 1 beta-1 large chain) Length = 683 Score = 28.9 bits (63), Expect = 9.3 Identities = 19/56 (33%), Positives = 27/56 (48%) Frame = +1 Query: 124 LVYRRLGFVSSLHAD*CVLAMNTASARDRVILKRSENNNPDMLAAALAVGSPVLLN 291 LVY L + H D C+LA+NT +K SE NP + A A+ + +N Sbjct: 72 LVYLYLINYAKTHPDLCILAVNT-------FVKDSEEYNPTLRALAIRTMGCIRVN 120 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 70,666,519 Number of Sequences: 219361 Number of extensions: 1483429 Number of successful extensions: 3627 Number of sequences better than 10.0: 5 Number of HSP's better than 10.0 without gapping: 3550 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3626 length of database: 80,573,946 effective HSP length: 105 effective length of database: 57,541,041 effective search space used: 4142954952 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)