| Clone Name | rbags26g20 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_470738.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1836 Score = 260 bits (131), Expect = 4e-66 Identities = 224/255 (87%) Strand = Plus / Minus Query: 277 ccagtattgcttaactgcaaagaggatcttctcaggcacacgagggccgccctcatggtc 336 ||||||||| ||||| |||||||| ||||||||||||||| ||||||| |||||||| || Sbjct: 1812 ccagtattgtttaaccgcaaagagtatcttctcaggcacatgagggccaccctcatgatc 1753 Query: 337 ggccagtgttgtctcccacctcatggcattggctactttttccacctttacaagagcgtc 396 | || | |||||| |||||||||||| || |||| ||| ||||||||||||||| | || Sbjct: 1752 agtcaatcttgtctgccacctcatggcgttagctattttctccacctttacaagaacatc 1693 Query: 397 aatcgtgtcacggattatgactgcgccctctgggcgtaagatccggtccatttccagtag 456 || | ||||||||||||| |||||||||||||| |||||||||||||||||||||| ||| Sbjct: 1692 aaccttgtcacggattataactgcgccctctggtcgtaagatccggtccatttccaatag 1633 Query: 457 tatatcttcaaatttacatttgttctggtacaaactgaagacaccgttagcatgtatgag 516 |||||||||||||||||| || |||| || || ||||| ||| |||||||||||||||| Sbjct: 1632 tatatcttcaaatttacacttattctcatataagctgaacacagcgttagcatgtatgag 1573 Query: 517 gtcatatgtccttgg 531 |||||||||||||| Sbjct: 1572 atcatatgtccttgg 1558
>dbj|AK119277.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-130-B10, full insert sequence Length = 2538 Score = 252 bits (127), Expect = 1e-63 Identities = 223/255 (87%) Strand = Plus / Minus Query: 277 ccagtattgcttaactgcaaagaggatcttctcaggcacacgagggccgccctcatggtc 336 ||||||||| ||||| |||||||| ||||||||||||||| ||||||| | |||||| || Sbjct: 1937 ccagtattgtttaaccgcaaagagtatcttctcaggcacatgagggccactctcatgatc 1878 Query: 337 ggccagtgttgtctcccacctcatggcattggctactttttccacctttacaagagcgtc 396 | || | |||||| |||||||||||| || |||| ||| ||||||||||||||| | || Sbjct: 1877 agtcaatcttgtctgccacctcatggcgttagctattttctccacctttacaagaacatc 1818 Query: 397 aatcgtgtcacggattatgactgcgccctctgggcgtaagatccggtccatttccagtag 456 || | ||||||||||||| |||||||||||||| |||||||||||||||||||||| ||| Sbjct: 1817 aaccttgtcacggattataactgcgccctctggtcgtaagatccggtccatttccaatag 1758 Query: 457 tatatcttcaaatttacatttgttctggtacaaactgaagacaccgttagcatgtatgag 516 |||||||||||||||||| || |||| || || ||||| ||| |||||||||||||||| Sbjct: 1757 tatatcttcaaatttacacttattctcatataagctgaacacagcgttagcatgtatgag 1698 Query: 517 gtcatatgtccttgg 531 |||||||||||||| Sbjct: 1697 atcatatgtccttgg 1683
>gb|AY107453.1| Zea mays PCO116376 mRNA sequence Length = 587 Score = 240 bits (121), Expect = 4e-60 Identities = 223/257 (86%) Strand = Plus / Minus Query: 275 gtccagtattgcttaactgcaaagaggatcttctcaggcacacgagggccgccctcatgg 334 |||||||||||||| || || ||||| ||||||||||| ||| ||||||| |||||||| Sbjct: 298 gtccagtattgcttgaccgcgaagagtatcttctcaggtacaagagggccaccctcatga 239 Query: 335 tcggccagtgttgtctcccacctcatggcattggctactttttccacctttacaagagcg 394 || |||| | |||||| |||||||||||||||||||| ||| ||||| ||||||||| | Sbjct: 238 tcagccaatcttgtcttccacctcatggcattggctattttctccacttttacaagaaca 179 Query: 395 tcaatcgtgtcacggattatgactgcgccctctgggcgtaagatccggtccatttccagt 454 |||| | ||||||| ||||||||||| ||||| ||||||||||| | |||||||||||| Sbjct: 178 tcaaccttgtcacgaattatgactgcaccctccgggcgtaagattctgtccatttccagg 119 Query: 455 agtatatcttcaaatttacatttgttctggtacaaactgaagacaccgttagcatgtatg 514 |||||||||||||| | ||||||||| |||||||| ||||||| || |||| |||||| Sbjct: 118 agtatatcttcaaactgacatttgttttggtacaagctgaagatgccattagaatgtata 59 Query: 515 aggtcatatgtccttgg 531 ||||||||||||||||| Sbjct: 58 aggtcatatgtccttgg 42
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 218 bits (110), Expect = 1e-53 Identities = 176/198 (88%) Strand = Plus / Minus Query: 277 ccagtattgcttaactgcaaagaggatcttctcaggcacacgagggccgccctcatggtc 336 ||||||||| ||||| |||||||| ||||||||||||||| ||||||| |||||||| || Sbjct: 14834960 ccagtattgtttaaccgcaaagagtatcttctcaggcacatgagggccaccctcatgatc 14834901 Query: 337 ggccagtgttgtctcccacctcatggcattggctactttttccacctttacaagagcgtc 396 | || | |||||| |||||||||||| || |||| ||| ||||||||||||||| | || Sbjct: 14834900 agtcaatcttgtctgccacctcatggcgttagctattttctccacctttacaagaacatc 14834841 Query: 397 aatcgtgtcacggattatgactgcgccctctgggcgtaagatccggtccatttccagtag 456 || | ||||||||||||| |||||||||||||| |||||||||||||||||||||| ||| Sbjct: 14834840 aaccttgtcacggattataactgcgccctctggtcgtaagatccggtccatttccaatag 14834781 Query: 457 tatatcttcaaatttaca 474 |||||||||||||||||| Sbjct: 14834780 tatatcttcaaatttaca 14834763 Score = 58.0 bits (29), Expect = 3e-05 Identities = 38/41 (92%) Strand = Plus / Minus Query: 491 ctgaagacaccgttagcatgtatgaggtcatatgtccttgg 531 ||||| ||| |||||||||||||||| |||||||||||||| Sbjct: 14834659 ctgaacacagcgttagcatgtatgagatcatatgtccttgg 14834619
>gb|AC084762.8| Oryza sativa chromosome 3 BAC OSJNBa0013O08 genomic sequence, complete sequence Length = 148021 Score = 218 bits (110), Expect = 1e-53 Identities = 176/198 (88%) Strand = Plus / Plus Query: 277 ccagtattgcttaactgcaaagaggatcttctcaggcacacgagggccgccctcatggtc 336 ||||||||| ||||| |||||||| ||||||||||||||| ||||||| |||||||| || Sbjct: 97808 ccagtattgtttaaccgcaaagagtatcttctcaggcacatgagggccaccctcatgatc 97867 Query: 337 ggccagtgttgtctcccacctcatggcattggctactttttccacctttacaagagcgtc 396 | || | |||||| |||||||||||| || |||| ||| ||||||||||||||| | || Sbjct: 97868 agtcaatcttgtctgccacctcatggcgttagctattttctccacctttacaagaacatc 97927 Query: 397 aatcgtgtcacggattatgactgcgccctctgggcgtaagatccggtccatttccagtag 456 || | ||||||||||||| |||||||||||||| |||||||||||||||||||||| ||| Sbjct: 97928 aaccttgtcacggattataactgcgccctctggtcgtaagatccggtccatttccaatag 97987 Query: 457 tatatcttcaaatttaca 474 |||||||||||||||||| Sbjct: 97988 tatatcttcaaatttaca 98005 Score = 58.0 bits (29), Expect = 3e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 491 ctgaagacaccgttagcatgtatgaggtcatatgtccttgg 531 ||||| ||| |||||||||||||||| |||||||||||||| Sbjct: 98109 ctgaacacagcgttagcatgtatgagatcatatgtccttgg 98149
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 218 bits (110), Expect = 1e-53 Identities = 176/198 (88%) Strand = Plus / Minus Query: 277 ccagtattgcttaactgcaaagaggatcttctcaggcacacgagggccgccctcatggtc 336 ||||||||| ||||| |||||||| ||||||||||||||| ||||||| |||||||| || Sbjct: 14829494 ccagtattgtttaaccgcaaagagtatcttctcaggcacatgagggccaccctcatgatc 14829435 Query: 337 ggccagtgttgtctcccacctcatggcattggctactttttccacctttacaagagcgtc 396 | || | |||||| |||||||||||| || |||| ||| ||||||||||||||| | || Sbjct: 14829434 agtcaatcttgtctgccacctcatggcgttagctattttctccacctttacaagaacatc 14829375 Query: 397 aatcgtgtcacggattatgactgcgccctctgggcgtaagatccggtccatttccagtag 456 || | ||||||||||||| |||||||||||||| |||||||||||||||||||||| ||| Sbjct: 14829374 aaccttgtcacggattataactgcgccctctggtcgtaagatccggtccatttccaatag 14829315 Query: 457 tatatcttcaaatttaca 474 |||||||||||||||||| Sbjct: 14829314 tatatcttcaaatttaca 14829297 Score = 58.0 bits (29), Expect = 3e-05 Identities = 38/41 (92%) Strand = Plus / Minus Query: 491 ctgaagacaccgttagcatgtatgaggtcatatgtccttgg 531 ||||| ||| |||||||||||||||| |||||||||||||| Sbjct: 14829193 ctgaacacagcgttagcatgtatgagatcatatgtccttgg 14829153
>gb|AC109365.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0034P08, complete sequence Length = 173088 Score = 54.0 bits (27), Expect = 5e-04 Identities = 39/43 (90%) Strand = Plus / Plus Query: 492 tgaagacaccgttagcatgtatgaggtcatatgtccttgggta 534 |||||||||| || ||||||||||||||||||| |||||||| Sbjct: 63498 tgaagacaccattgccatgtatgaggtcatatgttcttgggta 63540
>gb|AC146568.11| Medicago truncatula clone mth2-101o18, complete sequence Length = 129921 Score = 54.0 bits (27), Expect = 5e-04 Identities = 45/51 (88%) Strand = Plus / Minus Query: 481 ctggtacaaactgaagacaccgttagcatgtatgaggtcatatgtccttgg 531 ||||||||||||||||| || |||||||| ||||| |||||||| ||||| Sbjct: 4744 ctggtacaaactgaagaggccattagcatgaatgagatcatatgttcttgg 4694 Score = 42.1 bits (21), Expect = 1.8 Identities = 39/45 (86%) Strand = Plus / Minus Query: 403 gtcacggattatgactgcgccctctgggcgtaagatccggtccat 447 ||||||||||||||| ||||| ||||| || || ||||| ||||| Sbjct: 5559 gtcacggattatgacagcgccttctggtcgcaatatccgatccat 5515
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 54.0 bits (27), Expect = 5e-04 Identities = 39/43 (90%) Strand = Plus / Minus Query: 492 tgaagacaccgttagcatgtatgaggtcatatgtccttgggta 534 |||||||||| || ||||||||||||||||||| |||||||| Sbjct: 22277800 tgaagacaccattgccatgtatgaggtcatatgttcttgggta 22277758
>dbj|AK121243.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023099B06, full insert sequence Length = 2310 Score = 54.0 bits (27), Expect = 5e-04 Identities = 39/43 (90%) Strand = Plus / Minus Query: 492 tgaagacaccgttagcatgtatgaggtcatatgtccttgggta 534 |||||||||| || ||||||||||||||||||| |||||||| Sbjct: 1778 tgaagacaccattgccatgtatgaggtcatatgttcttgggta 1736
>gb|AF220204.1|AF220204 Malus domestica unknown mRNA Length = 2375 Score = 54.0 bits (27), Expect = 5e-04 Identities = 45/51 (88%) Strand = Plus / Minus Query: 484 gtacaaactgaagacaccgttagcatgtatgaggtcatatgtccttgggta 534 ||||| |||||| ||||| | ||||| ||||||||||||||||||||||| Sbjct: 1831 gtacatactgaaaacaccatgggcatgaatgaggtcatatgtccttgggta 1781
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 54.0 bits (27), Expect = 5e-04 Identities = 39/43 (90%) Strand = Plus / Minus Query: 492 tgaagacaccgttagcatgtatgaggtcatatgtccttgggta 534 |||||||||| || ||||||||||||||||||| |||||||| Sbjct: 22587711 tgaagacaccattgccatgtatgaggtcatatgttcttgggta 22587669
>ref|NM_197822.1| Oryza sativa (japonica cultivar-group) hypothetical protein (OSJNBa0095C07.16), mRNA Length = 2061 Score = 50.1 bits (25), Expect = 0.008 Identities = 94/117 (80%) Strand = Plus / Minus Query: 412 tatgactgcgccctctgggcgtaagatccggtccatttccagtagtatatcttcaaattt 471 ||||||||||||||| || ||||| |||| ||||| ||||| || || ||||| | || Sbjct: 1896 tatgactgcgccctcaggacgtaaaatcctatccatctccagaagaatgtcttccatgtt 1837 Query: 472 acatttgttctggtacaaactgaagacaccgttagcatgtatgaggtcatatgtcct 528 || || |||||||| || ||||||| ||| || |||||||| | ||| |||||||| Sbjct: 1836 gcacttattctggtataagctgaagagaccattggcatgtatcaagtcgtatgtcct 1780
>gb|AC139328.4| Mus musculus BAC clone RP24-299C21 from chromosome Y, complete sequence Length = 156740 Score = 50.1 bits (25), Expect = 0.008 Identities = 28/29 (96%) Strand = Plus / Plus Query: 61 aacacgaacaaaaacaaacaaaaatacaa 89 ||||| ||||||||||||||||||||||| Sbjct: 103394 aacacaaacaaaaacaaacaaaaatacaa 103422
>gb|BT014452.1| Lycopersicon esculentum clone 133778R, mRNA sequence Length = 2259 Score = 50.1 bits (25), Expect = 0.008 Identities = 43/49 (87%) Strand = Plus / Minus Query: 440 cggtccatttccagtagtatatcttcaaatttacatttgttctggtaca 488 ||||||||||| || || ||||||||||||| ||| |||| |||||||| Sbjct: 1720 cggtccatttctaggagaatatcttcaaattcacacttgtcctggtaca 1672
>dbj|AK072459.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023121D12, full insert sequence Length = 2438 Score = 50.1 bits (25), Expect = 0.008 Identities = 94/117 (80%) Strand = Plus / Minus Query: 412 tatgactgcgccctctgggcgtaagatccggtccatttccagtagtatatcttcaaattt 471 ||||||||||||||| || ||||| |||| ||||| ||||| || || ||||| | || Sbjct: 1919 tatgactgcgccctcaggacgtaaaatcctatccatctccagaagaatgtcttccatgtt 1860 Query: 472 acatttgttctggtacaaactgaagacaccgttagcatgtatgaggtcatatgtcct 528 || || |||||||| || ||||||| ||| || |||||||| | ||| |||||||| Sbjct: 1859 gcacttattctggtataagctgaagagaccattggcatgtatcaagtcgtatgtcct 1803
>gb|BT014522.1| Lycopersicon esculentum clone 133918F, mRNA sequence Length = 2199 Score = 48.1 bits (24), Expect = 0.030 Identities = 30/32 (93%) Strand = Plus / Minus Query: 503 ttagcatgtatgaggtcatatgtccttgggta 534 |||||||| ||||| ||||||||||||||||| Sbjct: 1620 ttagcatgaatgagatcatatgtccttgggta 1589
>gb|AC167814.4| Mus musculus BAC clone RP24-248O12 from chromosome 17, complete sequence Length = 177174 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Minus Query: 70 aaaaacaaacaaaaatacaacac 92 ||||||||||||||||||||||| Sbjct: 108205 aaaaacaaacaaaaatacaacac 108183
>gb|AC168055.3| Mus musculus BAC clone RP24-360I1 from chromosome 10, complete sequence Length = 206775 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Minus Query: 69 caaaaacaaacaaaaatacaacacgaa 95 ||||||||||||||||||||| ||||| Sbjct: 159903 caaaaacaaacaaaaatacaaaacgaa 159877
>gb|AC151802.1| Solanum tuberosum chromosome 5 clone PGEC46 map MAP_LOC, complete sequence Length = 43509 Score = 46.1 bits (23), Expect = 0.12 Identities = 29/31 (93%) Strand = Plus / Plus Query: 504 tagcatgtatgaggtcatatgtccttgggta 534 ||||||| ||||| ||||||||||||||||| Sbjct: 943 tagcatgaatgagatcatatgtccttgggta 973
>gb|AC149267.1| Solanum demissum chromosome 5 clone PGEC747E24 map MAP_LOC, complete sequence Length = 92340 Score = 46.1 bits (23), Expect = 0.12 Identities = 29/31 (93%) Strand = Plus / Plus Query: 504 tagcatgtatgaggtcatatgtccttgggta 534 ||||||| ||||| ||||||||||||||||| Sbjct: 88205 tagcatgaatgagatcatatgtccttgggta 88235
>gb|AC149287.1| Solanum demissum chromosome 5 clone PGEC568D21 map MAP_LOC, complete sequence Length = 119525 Score = 46.1 bits (23), Expect = 0.12 Identities = 29/31 (93%) Strand = Plus / Plus Query: 504 tagcatgtatgaggtcatatgtccttgggta 534 ||||||| ||||| ||||||||||||||||| Sbjct: 1087 tagcatgaatgagatcatatgtccttgggta 1117
>gb|AC144791.1| Solanum demissum chromosome 5 BAC PGEC668E02 genomic sequence, complete sequence Length = 142575 Score = 46.1 bits (23), Expect = 0.12 Identities = 29/31 (93%) Strand = Plus / Minus Query: 504 tagcatgtatgaggtcatatgtccttgggta 534 ||||||| ||||| ||||||||||||||||| Sbjct: 44552 tagcatgaatgagatcatatgtccttgggta 44522
>gb|AC161442.5| Mus musculus chromosome 5, clone RP23-384P12, complete sequence Length = 174557 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Minus Query: 67 aacaaaaacaaacaaaaatacaa 89 ||||||||||||||||||||||| Sbjct: 132636 aacaaaaacaaacaaaaatacaa 132614
>gb|AC101969.6| Mus musculus chromosome 17, clone RP24-259G8, complete sequence Length = 219711 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 70 aaaaacaaacaaaaatacaacac 92 ||||||||||||||||||||||| Sbjct: 162892 aaaaacaaacaaaaatacaacac 162914
>gb|AC114648.25| Mus musculus chromosome 8, clone RP24-144H17, complete sequence Length = 171191 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 67 aacaaaaacaaacaaaaatacaa 89 ||||||||||||||||||||||| Sbjct: 91201 aacaaaaacaaacaaaaatacaa 91223
>gb|AC079988.6| Homo sapiens BAC clone RP11-795C1 from 2, complete sequence Length = 211305 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 67 aacaaaaacaaacaaaaatacaa 89 ||||||||||||||||||||||| Sbjct: 127666 aacaaaaacaaacaaaaatacaa 127688
>gb|AC013399.6| Homo sapiens BAC clone RP11-69O6 from 2, complete sequence Length = 171812 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 67 aacaaaaacaaacaaaaatacaa 89 ||||||||||||||||||||||| Sbjct: 26709 aacaaaaacaaacaaaaatacaa 26731
>emb|AL954231.3|PTB144O12 Pan troglodytes chromosome 22 BAC PTB-144O12, complete sequence Length = 180638 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Minus Query: 67 aacaaaaacaaacaaaaatacaa 89 ||||||||||||||||||||||| Sbjct: 176991 aacaaaaacaaacaaaaatacaa 176969
>emb|AL954232.2|RP43039B12 Pan troglodytes chromosome 22 BAC RP43-039B12, complete sequence Length = 201761 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Minus Query: 67 aacaaaaacaaacaaaaatacaa 89 ||||||||||||||||||||||| Sbjct: 185197 aacaaaaacaaacaaaaatacaa 185175
>emb|AL954233.1|RP43116M22 Pan troglodytes chromosome 22 BAC RP43-116M22, complete sequence Length = 163163 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Minus Query: 67 aacaaaaacaaacaaaaatacaa 89 ||||||||||||||||||||||| Sbjct: 70541 aacaaaaacaaacaaaaatacaa 70519
>emb|CT010568.14| Mouse DNA sequence from clone RP23-290F22 on chromosome 16, complete sequence Length = 203101 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 67 aacaaaaacaaacaaaaatacaa 89 ||||||||||||||||||||||| Sbjct: 133857 aacaaaaacaaacaaaaatacaa 133879
>gb|AC171209.1| Mus musculus BAC clone RP23-105E1 from chromosome 17, complete sequence Length = 212184 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 70 aaaaacaaacaaaaatacaacac 92 ||||||||||||||||||||||| Sbjct: 200342 aaaaacaaacaaaaatacaacac 200364
>gb|AC091807.4| Homo sapiens chromosome X clone RP6-186E3 map p11.4, complete sequence Length = 172150 Score = 44.1 bits (22), Expect = 0.46 Identities = 25/26 (96%) Strand = Plus / Plus Query: 59 acaacacgaacaaaaacaaacaaaaa 84 |||||| ||||||||||||||||||| Sbjct: 9413 acaacaagaacaaaaacaaacaaaaa 9438
>gb|BT013699.1| Lycopersicon esculentum clone 132541R, mRNA sequence Length = 2467 Score = 44.1 bits (22), Expect = 0.46 Identities = 61/74 (82%) Strand = Plus / Minus Query: 461 tcttcaaatttacatttgttctggtacaaactgaagacaccgttagcatgtatgaggtca 520 |||||||| || || |||| || ||| |||||||| | ||| | |||||| ||||| ||| Sbjct: 1867 tcttcaaagttgcacttgtccttgtataaactgaaaagaccatgagcatgaatgagatca 1808 Query: 521 tatgtccttgggta 534 || ||||||||||| Sbjct: 1807 taagtccttgggta 1794
>gb|AC158983.2| Mus musculus BAC clone RP23-264L8 from chromosome 14, complete sequence Length = 218519 Score = 44.1 bits (22), Expect = 0.46 Identities = 25/26 (96%) Strand = Plus / Minus Query: 67 aacaaaaacaaacaaaaatacaacac 92 ||||||||||||||||||| |||||| Sbjct: 151933 aacaaaaacaaacaaaaatccaacac 151908
>emb|AL389887.7| Human DNA sequence from clone RP11-54F22 on chromosome Xq21.1-21.31 Contains the 5' end of the RPS6KA6 gene for ribosomal protein S6 kinase (90kD) polypeptide 6 and a CpG island, complete sequence Length = 143220 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Plus Query: 67 aacaaaaacaaacaaaaataca 88 |||||||||||||||||||||| Sbjct: 131129 aacaaaaacaaacaaaaataca 131150
>gb|AC069233.16| Homo sapiens 3 BAC RP11-95H16 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 154204 Score = 44.1 bits (22), Expect = 0.46 Identities = 25/26 (96%) Strand = Plus / Minus Query: 59 acaacacgaacaaaaacaaacaaaaa 84 |||| ||||||||||||||||||||| Sbjct: 38273 acaaaacgaacaaaaacaaacaaaaa 38248
>gb|AC171497.3| Pan troglodytes chromosome X clone PTB-121G07 map human ortholog p11.4, complete sequence Length = 227065 Score = 44.1 bits (22), Expect = 0.46 Identities = 25/26 (96%) Strand = Plus / Plus Query: 59 acaacacgaacaaaaacaaacaaaaa 84 |||||| ||||||||||||||||||| Sbjct: 52473 acaacaagaacaaaaacaaacaaaaa 52498
>gb|AC093298.3| Homo sapiens chromosome 5 clone RP11-543L14, complete sequence Length = 198687 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Minus Query: 274 agtccagtattgcttaactgca 295 |||||||||||||||||||||| Sbjct: 185481 agtccagtattgcttaactgca 185460
>gb|AC087378.6| Homo sapiens chromosome 11, clone RP11-375L11, complete sequence Length = 166379 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Minus Query: 67 aacaaaaacaaacaaaaataca 88 |||||||||||||||||||||| Sbjct: 120116 aacaaaaacaaacaaaaataca 120095
>gb|AC104947.3| Homo sapiens chromosome 11, clone RP11-1029L14, complete sequence Length = 186823 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Plus Query: 67 aacaaaaacaaacaaaaataca 88 |||||||||||||||||||||| Sbjct: 1835 aacaaaaacaaacaaaaataca 1856
>gb|AC103870.3| Homo sapiens chromosome 11, clone RP11-702L21, complete sequence Length = 182598 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Plus Query: 67 aacaaaaacaaacaaaaataca 88 |||||||||||||||||||||| Sbjct: 154323 aacaaaaacaaacaaaaataca 154344
>dbj|AK145211.1| Mus musculus mammary gland RCB-0527 Jyg-MC(B) cDNA, RIKEN full-length enriched library, clone:G930020L04 product:purinergic receptor P2X, ligand-gated ion channel, 7, full insert sequence Length = 4713 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Minus Query: 67 aacaaaaacaaacaaaaataca 88 |||||||||||||||||||||| Sbjct: 3979 aacaaaaacaaacaaaaataca 3958
>gb|AC069362.12| Homo sapiens, clone RP11-745J24, complete sequence Length = 176295 Score = 44.1 bits (22), Expect = 0.46 Identities = 25/26 (96%) Strand = Plus / Minus Query: 59 acaacacgaacaaaaacaaacaaaaa 84 |||||| ||||||||||||||||||| Sbjct: 155302 acaacaagaacaaaaacaaacaaaaa 155277
>emb|BX649300.4| Zebrafish DNA sequence from clone CH211-195I16 in linkage group 23, complete sequence Length = 202963 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Minus Query: 67 aacaaaaacaaacaaaaataca 88 |||||||||||||||||||||| Sbjct: 19083 aacaaaaacaaacaaaaataca 19062
>gb|AC068914.7| Homo sapiens BAC clone CTD-2026C7 from 2, complete sequence Length = 129954 Score = 44.1 bits (22), Expect = 0.46 Identities = 25/26 (96%) Strand = Plus / Plus Query: 61 aacacgaacaaaaacaaacaaaaata 86 |||||||| ||||||||||||||||| Sbjct: 18487 aacacgaagaaaaacaaacaaaaata 18512
>gb|AC157560.3| Mus musculus chromosome 15, clone RP24-270I3, complete sequence Length = 157844 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 67 aacaaaaacaaacaaaaatac 87 ||||||||||||||||||||| Sbjct: 99693 aacaaaaacaaacaaaaatac 99673
>gb|AC104881.9| Mus musculus chromosome 18, clone RP23-244A24, complete sequence Length = 184796 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 69 caaaaacaaacaaaaatacaa 89 ||||||||||||||||||||| Sbjct: 14969 caaaaacaaacaaaaatacaa 14949
>gb|AC130222.4| Mus musculus BAC clone RP23-18K19 from chromosome 12, complete sequence Length = 218608 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 67 aacaaaaacaaacaaaaatac 87 ||||||||||||||||||||| Sbjct: 6401 aacaaaaacaaacaaaaatac 6381
>gb|AC126217.3| Rattus norvegicus 1 BAC CH230-9L4 (Children's Hospital Oakland Research Institute) complete sequence Length = 243051 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Minus Query: 70 aaaaacaaacaaaaatacaacacgaacca 98 ||||||||||||||| ||||||| ||||| Sbjct: 185986 aaaaacaaacaaaaaaacaacacaaacca 185958
>gb|AC134534.3| Mus musculus BAC clone RP24-562E3 from chromosome 7, complete sequence Length = 185268 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 67 aacaaaaacaaacaaaaatacaaca 91 |||||||||||||||||| |||||| Sbjct: 67549 aacaaaaacaaacaaaaaaacaaca 67525
>emb|CR956355.2| Pan troglodytes chromosome X BAC RP43-051D20, complete sequence Length = 185393 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 67 aacaaaaacaaacaaaaatacaaca 91 |||||||||||||||||||| |||| Sbjct: 38984 aacaaaaacaaacaaaaataaaaca 39008
>gb|AC127423.4| Mus musculus BAC clone RP24-487D5 from chromosome 7, complete sequence Length = 160293 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 67 aacaaaaacaaacaaaaatacaaca 91 |||||||||||||||||| |||||| Sbjct: 99545 aacaaaaacaaacaaaaaaacaaca 99521
>gb|AC098711.2| Mus musculus BAC clone RP23-1M11 from 13, complete sequence Length = 204508 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Minus Query: 61 aacacgaacaaaaacaaacaaaaatacaa 89 |||| ||||||||||||||||| |||||| Sbjct: 82755 aacaagaacaaaaacaaacaaatatacaa 82727
>gb|AC102692.6| Mus musculus chromosome 18, clone RP24-491K18, complete sequence Length = 225042 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 69 caaaaacaaacaaaaatacaa 89 ||||||||||||||||||||| Sbjct: 202223 caaaaacaaacaaaaatacaa 202203
>gb|AC103574.7| Rattus norvegicus 1 BAC CH230-205C19 (Children's Hospital Oakland Research Institute) complete sequence Length = 199047 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Plus Query: 70 aaaaacaaacaaaaatacaacacgaacca 98 ||||||||||||||| ||||||| ||||| Sbjct: 194137 aaaaacaaacaaaaaaacaacacaaacca 194165
>emb|CR932961.2| Medicago truncatula chromosome 5 clone mth2-62c4, COMPLETE SEQUENCE Length = 119142 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 459 tatcttcaaatttacatttgt 479 ||||||||||||||||||||| Sbjct: 95249 tatcttcaaatttacatttgt 95229
>emb|BX682235.2| Human DNA sequence from clone WI2-83379A6 on chromosome X, complete sequence Length = 40361 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 67 aacaaaaacaaacaaaaatacaaca 91 |||||||||||| |||||||||||| Sbjct: 27265 aacaaaaacaaaaaaaaatacaaca 27289
>emb|AL390728.37| Human DNA sequence from clone RP11-488L18 on chromosome 1 Contains a pseudogene similar to part of fibroblast growth factor receptor 3 (achondroplasia, thanatophoric dwarfism) (FGFR3), the ZNF124 gene for zinc finger protein 124 (HZF-16), a peroxisomal biogenesis factor 5 (PEX5) pseudogene, a zinc finger protein pseudogene, the 3' end of a novel transcript, a heat shock 70kDa protein 8 (HSPA8) pseudogene and five CpG islands, complete sequence Length = 123668 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 67 aacaaaaacaaacaaaaatacaaca 91 |||||||||||||||||| |||||| Sbjct: 112041 aacaaaaacaaacaaaaacacaaca 112017
>emb|AL359832.33| Human DNA sequence from clone RP11-790G19 on chromosome 10 Contains the 5' end of the gene for transmembrane receptor Unc5H2 (UNC5H2),the 3'end of a novel gene and two CpG islands, complete sequence Length = 195130 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 69 caaaaacaaacaaaaatacaa 89 ||||||||||||||||||||| Sbjct: 34948 caaaaacaaacaaaaatacaa 34968
>emb|AL356532.9| Human DNA sequence from clone RP3-503M14 on chromosome 1 Contains the 3' end of the gene for a novel protein, the 5' end of the MPZL1 gene for myelin protein zero-like 1 and two CpG islands, complete sequence Length = 24706 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 64 acgaacaaaaacaaacaaaaa 84 ||||||||||||||||||||| Sbjct: 13438 acgaacaaaaacaaacaaaaa 13458
>emb|AL139085.13| Human DNA sequence from clone RP11-431O22 on chromosome 13 Contains the 5' end of the gene for chondromodulin I precursor (CHM-I), a novel gene, the PCDH8 gene for protocadherin 8 and 4 CpG islands, complete sequence Length = 173292 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 67 aacaaaaacaaacaaaaatac 87 ||||||||||||||||||||| Sbjct: 102580 aacaaaaacaaacaaaaatac 102600
>gb|AC117633.6| Mus musculus, clone RP23-200C8, complete sequence Length = 224221 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 67 aacaaaaacaaacaaaaatac 87 ||||||||||||||||||||| Sbjct: 178441 aacaaaaacaaacaaaaatac 178461
>emb|AL049643.12|HSJ672M15 Human DNA sequence from clone RP4-672M15 on chromosome Xp21.1-21.3 Contains the 5' end of three variants of the DMD gene for dystrophin (muscular dystrophy, Duchenne and Becker types), complete sequence Length = 118695 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 67 aacaaaaacaaacaaaaatacaaca 91 |||||||||||||||||||| |||| Sbjct: 4383 aacaaaaacaaacaaaaataaaaca 4407
>emb|AL033384.2|HS523E19 Human DNA sequence from clone RP3-523E19 on chromosome 6p11.2-12.3 Contains the 3' end of the LRRC1 gene for leucine rich repeat containing 1, a novel gene and the 5' end of a novel gene, complete sequence Length = 67512 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 69 caaaaacaaacaaaaatacaa 89 ||||||||||||||||||||| Sbjct: 57938 caaaaacaaacaaaaatacaa 57958
>gb|CP000088.1| Thermobifida fusca YX, complete genome Length = 3642249 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 251 tagcggcggctcttgctgtcg 271 ||||||||||||||||||||| Sbjct: 1831186 tagcggcggctcttgctgtcg 1831206
>gb|AC141879.5| Mus musculus BAC clone RP24-249I4 from chromosome 16, complete sequence Length = 148167 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 67 aacaaaaacaaacaaaaatac 87 ||||||||||||||||||||| Sbjct: 92007 aacaaaaacaaacaaaaatac 92027
>gb|AC114969.2| Homo sapiens chromosome 5 clone RP11-356D23, complete sequence Length = 164526 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 67 aacaaaaacaaacaaaaatacaaca 91 |||||||||||||||||| |||||| Sbjct: 137381 aacaaaaacaaacaaaaaaacaaca 137405
>gb|AC004673.1| Homo sapiens X BAC GSHB-590J15 (Genome Systems Human BAC library) complete sequence Length = 236281 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 67 aacaaaaacaaacaaaaatac 87 ||||||||||||||||||||| Sbjct: 143261 aacaaaaacaaacaaaaatac 143241
>emb|BX927071.12| Zebrafish DNA sequence from clone DKEY-286O23 in linkage group 18, complete sequence Length = 143863 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 67 aacaaaaacaaacaaaaatac 87 ||||||||||||||||||||| Sbjct: 99578 aacaaaaacaaacaaaaatac 99598
>gb|AC109496.2| Homo sapiens chromosome 5 clone RP11-93D22, complete sequence Length = 186984 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 67 aacaaaaacaaacaaaaatac 87 ||||||||||||||||||||| Sbjct: 180309 aacaaaaacaaacaaaaatac 180329
>gb|AC010600.6| Homo sapiens chromosome 5 clone CTC-564D18, complete sequence Length = 173349 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 67 aacaaaaacaaacaaaaatac 87 ||||||||||||||||||||| Sbjct: 97341 aacaaaaacaaacaaaaatac 97361
>dbj|AB063327.1| Anthocidaris crassispina EGIP gene for exogastrula-inducing peptide precursor, partial cds Length = 4566 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 64 acgaacaaaaacaaacaaaaa 84 ||||||||||||||||||||| Sbjct: 1272 acgaacaaaaacaaacaaaaa 1292
>gb|AC163706.2| Gallus gallus BAC clone CH261-71A16 from chromosome w, complete sequence Length = 206206 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 70 aaaaacaaacaaaaatacaac 90 ||||||||||||||||||||| Sbjct: 116109 aaaaacaaacaaaaatacaac 116089
>emb|AL772275.9| Mouse DNA sequence from clone RP23-308P6 on chromosome 4, complete sequence Length = 31386 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 67 aacaaaaacaaacaaaaatacaaca 91 |||||||| |||||||||||||||| Sbjct: 28858 aacaaaaagaaacaaaaatacaaca 28882
>gb|AC006329.5| Homo sapiens BAC clone RP11-132A1 from 7, complete sequence Length = 145253 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 67 aacaaaaacaaacaaaaatacaaca 91 |||||||||||||||||| |||||| Sbjct: 45579 aacaaaaacaaacaaaaaaacaaca 45555
>gb|AC154902.2| Mus musculus BAC clone RP24-85I19 from chromosome 7, complete sequence Length = 213932 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 67 aacaaaaacaaacaaaaatacaaca 91 |||||||||||||||||| |||||| Sbjct: 8033 aacaaaaacaaacaaaaaaacaaca 8057
>dbj|AK042678.1| Mus musculus 7 days neonate cerebellum cDNA, RIKEN full-length enriched library, clone:A730014O07 product:MESENCHYMAL STEM CELL PROTEIN DSC54 homolog [Homo sapiens], full insert sequence Length = 2503 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 67 aacaaaaacaaacaaaaatac 87 ||||||||||||||||||||| Sbjct: 2170 aacaaaaacaaacaaaaatac 2190
>dbj|AK050437.1| Mus musculus adult male liver tumor cDNA, RIKEN full-length enriched library, clone:C730047P15 product:unclassifiable, full insert sequence Length = 2867 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Minus Query: 61 aacacgaacaaaaacaaacaaaaatacaa 89 ||||| |||||||||||||||||| |||| Sbjct: 601 aacacaaacaaaaacaaacaaaaacacaa 573
>tpg|BK000438.1| TPA: TPA_exp: Homo sapiens RING finger protein COP1 gene, complete cds Length = 421987 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 72 aaacaaacaaaaatacaacacgaac 96 |||||||||||||||||||| |||| Sbjct: 55635 aaacaaacaaaaatacaacaagaac 55659
>emb|BX470242.10| Zebrafish DNA sequence from clone CH211-195I24 in linkage group 16, complete sequence Length = 114149 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 67 aacaaaaacaaacaaaaatacaaca 91 |||||||||||||||||| |||||| Sbjct: 108669 aacaaaaacaaacaaaaaaacaaca 108645
>emb|BX908741.7| Mouse DNA sequence from clone RP23-189F6 on chromosome 2, complete sequence Length = 139484 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 67 aacaaaaacaaacaaaaatacaaca 91 |||||||||||||||||| |||||| Sbjct: 100605 aacaaaaacaaacaaaaagacaaca 100581
>gb|AC021989.8| Homo sapiens BAC clone RP11-92H22 from 4, complete sequence Length = 154413 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 67 aacaaaaacaaacaaaaatac 87 ||||||||||||||||||||| Sbjct: 19926 aacaaaaacaaacaaaaatac 19906
>gb|AC018462.4| Homo sapiens BAC clone RP11-270B14 from 2, complete sequence Length = 189326 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 370 tactttttccacctttacaag 390 ||||||||||||||||||||| Sbjct: 109194 tactttttccacctttacaag 109214
>gb|AC122227.4| Mus musculus BAC clone RP23-131H10 from chromosome 12, complete sequence Length = 208332 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 67 aacaaaaacaaacaaaaatac 87 ||||||||||||||||||||| Sbjct: 153801 aacaaaaacaaacaaaaatac 153781
>gb|AC008430.3|AC008430 Homo sapiens chromosome 5 clone CTC-310F2, complete sequence Length = 199912 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 67 aacaaaaacaaacaaaaatac 87 ||||||||||||||||||||| Sbjct: 146652 aacaaaaacaaacaaaaatac 146672
>emb|AL954170.4| Mouse DNA sequence from clone RP23-467H15 on chromosome 2, complete sequence Length = 138152 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 67 aacaaaaacaaacaaaaatacaaca 91 |||||||||||||||||| |||||| Sbjct: 98579 aacaaaaacaaacaaaaagacaaca 98555
>emb|CR855373.6| Zebrafish DNA sequence from clone CH73-124C24 in linkage group 18, complete sequence Length = 28461 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 67 aacaaaaacaaacaaaaatac 87 ||||||||||||||||||||| Sbjct: 25074 aacaaaaacaaacaaaaatac 25054
>emb|CR388170.5| Zebrafish DNA sequence from clone CH211-87E4 in linkage group 20, complete sequence Length = 174079 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 67 aacaaaaacaaacaaaaatacaaca 91 |||||||||| |||||||||||||| Sbjct: 75952 aacaaaaacatacaaaaatacaaca 75976
>emb|BX276086.4| Zebrafish DNA sequence from clone CH211-114C9 in linkage group 20, complete sequence Length = 172431 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 67 aacaaaaacaaacaaaaatacaaca 91 |||||||||| |||||||||||||| Sbjct: 99240 aacaaaaacatacaaaaatacaaca 99216
>gb|AC006925.6|AC006925 Homo sapiens chromosome 17, clone hRPK.81_I_9, complete sequence Length = 176186 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 73 aacaaacaaaaatacaacacgaacc 97 |||||||||||||||||| |||||| Sbjct: 31764 aacaaacaaaaatacaacccgaacc 31740
>dbj|AP002379.4| Homo sapiens genomic DNA, chromosome 11 clone:RP11-463F4, complete sequence Length = 215986 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 468 atttacatttgttctggtacaaact 492 ||||||||||||| ||||||||||| Sbjct: 193604 atttacatttgttatggtacaaact 193580
>dbj|AP001709.1| Homo sapiens genomic DNA, chromosome 21q, section 53/105 Length = 340000 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 70 aaaaacaaacaaaaatacaacacga 94 ||||||||||||||||| ||||||| Sbjct: 293760 aaaaacaaacaaaaataaaacacga 293736
>gb|AC110216.10| Mus musculus chromosome 18, clone RP24-502I6, complete sequence Length = 201138 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 67 aacaaaaacaaacaaaaatac 87 ||||||||||||||||||||| Sbjct: 87475 aacaaaaacaaacaaaaatac 87495
>dbj|AP000245.3| Homo sapiens genomic DNA, chromosome 21 clone:RP11-14B21, complete sequence Length = 159903 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 70 aaaaacaaacaaaaatacaacacga 94 ||||||||||||||||| ||||||| Sbjct: 62336 aaaaacaaacaaaaataaaacacga 62312
>emb|AL359265.8| Human DNA sequence from clone RP11-195C7 on chromosome 1 Contains the 5' end of the gene for constitutive photomorphogenic protein (COP1), a novel gene, a ribosomal protein L13 (RPL13) pseudogene, a novel pseudogene and a CpG island, complete sequence Length = 155805 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 72 aaacaaacaaaaatacaacacgaac 96 |||||||||||||||||||| |||| Sbjct: 100171 aaacaaacaaaaatacaacaagaac 100147
>gb|AC135635.5| Mus musculus BAC clone RP23-245M20 from 3, complete sequence Length = 192485 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 67 aacaaaaacaaacaaaaatac 87 ||||||||||||||||||||| Sbjct: 94324 aacaaaaacaaacaaaaatac 94304
>emb|AL833795.7| Mouse DNA sequence from clone RP23-81B16 on chromosome X, complete sequence Length = 72909 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 66 gaacaaaaacaaacaaaaata 86 ||||||||||||||||||||| Sbjct: 10381 gaacaaaaacaaacaaaaata 10401
>emb|AL805957.12| Mouse DNA sequence from clone RP23-259P7 on chromosome 4, complete sequence Length = 197911 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 67 aacaaaaacaaacaaaaatacaaca 91 |||||||||||||||||| |||||| Sbjct: 176093 aacaaaaacaaacaaaaaaacaaca 176117
>gb|AC154248.2| Mus musculus BAC clone RP24-182I14 from chromosome 13, complete sequence Length = 188542 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Minus Query: 61 aacacgaacaaaaacaaacaaaaatacaa 89 ||||| |||||||||||||||||| |||| Sbjct: 57561 aacacaaacaaaaacaaacaaaaacacaa 57533
>emb|AL772219.7| Zebrafish DNA sequence from clone DKEY-51K10 in linkage group 17, complete sequence Length = 117244 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 67 aacaaaaacaaacaaaaatacaaca 91 |||||||||||||||||| |||||| Sbjct: 91626 aacaaaaacaaacaaaaaaacaaca 91650
>gb|AC155652.25| Mus musculus 6 BAC RP24-480I7 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 121680 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 67 aacaaaaacaaacaaaaatac 87 ||||||||||||||||||||| Sbjct: 68753 aacaaaaacaaacaaaaatac 68733
>emb|AL732530.6| Mouse DNA sequence from clone RP23-102I12 on chromosome 4, complete sequence Length = 211998 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 67 aacaaaaacaaacaaaaatacaaca 91 |||||||||||||||||| |||||| Sbjct: 163921 aacaaaaacaaacaaaaagacaaca 163945
>dbj|AP000206.1| Homo sapiens genomic DNA, chromosome 21q22.1, D21S226-AML region, clone f43D11-119B8, segment 4/12, complete sequence Length = 100000 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 70 aaaaacaaacaaaaatacaacacga 94 ||||||||||||||||| ||||||| Sbjct: 28748 aaaaacaaacaaaaataaaacacga 28724
>gb|AC153609.2| Mus musculus 6 BAC RP23-77I23 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 221782 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 59 acaacacgaacaaaaacaaa 78 |||||||||||||||||||| Sbjct: 103877 acaacacgaacaaaaacaaa 103858
>gb|AY540678.1| Trypanosoma cruzi strain CM17 histone H1 genes, partial cds; and intergenic repeat region, complete sequence Length = 479 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 67 aacaaaaacaaacaaaaata 86 |||||||||||||||||||| Sbjct: 178 aacaaaaacaaacaaaaata 159
>gb|AY540677.1| Trypanosoma cruzi strain Tulahuen cl2 histone H1 genes, partial cds; and intergenic repeat region, complete sequence Length = 480 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 67 aacaaaaacaaacaaaaata 86 |||||||||||||||||||| Sbjct: 178 aacaaaaacaaacaaaaata 159
>gb|AY540676.1| Trypanosoma cruzi strain SC43 cl1 histone H1 genes, partial cds; and intergenic repeat region, complete sequence Length = 482 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 67 aacaaaaacaaacaaaaata 86 |||||||||||||||||||| Sbjct: 181 aacaaaaacaaacaaaaata 162
>gb|AY540675.1| Trypanosoma cruzi strain P63 histone H1 genes, partial cds; and intergenic repeat region, complete sequence Length = 480 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 67 aacaaaaacaaacaaaaata 86 |||||||||||||||||||| Sbjct: 181 aacaaaaacaaacaaaaata 162
>gb|AY540674.1| Trypanosoma cruzi strain NR cl3 histone H1 genes, partial cds; and intergenic repeat region, complete sequence Length = 480 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 67 aacaaaaacaaacaaaaata 86 |||||||||||||||||||| Sbjct: 178 aacaaaaacaaacaaaaata 159
>gb|AC114585.19| Mus musculus chromosome 14, clone RP23-296J16, complete sequence Length = 192819 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 216 cctgaagagaagcgagaaca 235 |||||||||||||||||||| Sbjct: 84026 cctgaagagaagcgagaaca 84007
>gb|AC119269.9| Mus musculus chromosome 5, clone RP24-324B22, complete sequence Length = 172282 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 67 aacaaaaacaaacaaaaata 86 |||||||||||||||||||| Sbjct: 93506 aacaaaaacaaacaaaaata 93525
>gb|AC120348.9| Mus musculus chromosome 5, clone RP23-55P22, complete sequence Length = 244565 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 61 aacacgaacaaaaacaaacaaaaa 84 |||| ||||||||||||||||||| Sbjct: 40703 aacaagaacaaaaacaaacaaaaa 40726
>gb|AC159318.4| Mus musculus BAC clone RP23-76M13 from chromosome 12, complete sequence Length = 269200 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 274 agtccagtattgcttaactg 293 |||||||||||||||||||| Sbjct: 75346 agtccagtattgcttaactg 75327
>gb|AC154039.17| Mus musculus 10 BAC RP23-282M20 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 210923 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 70 aaaaacaaacaaaaatacaa 89 |||||||||||||||||||| Sbjct: 82907 aaaaacaaacaaaaatacaa 82926
>gb|AC104932.22| Mus musculus chromosome 3, clone RP24-337A16, complete sequence Length = 184718 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 70 aaaaacaaacaaaaatacaa 89 |||||||||||||||||||| Sbjct: 142968 aaaaacaaacaaaaatacaa 142949
>gb|AC157931.11| Mus musculus chromosome 5, clone RP24-159I10, complete sequence Length = 147518 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 67 aacaaaaacaaacaaaaata 86 |||||||||||||||||||| Sbjct: 45346 aacaaaaacaaacaaaaata 45327
>gb|AC102168.9| Mus musculus chromosome 7, clone RP23-452N21, complete sequence Length = 171392 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 67 aacaaaaacaaacaaaaata 86 |||||||||||||||||||| Sbjct: 114322 aacaaaaacaaacaaaaata 114303
>gb|AC005179.1| Homo sapiens chromosome 5, P1 clone 1041F10 (LBNL H88), complete sequence Length = 59765 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 67 aacaaaaacaaacaaaaata 86 |||||||||||||||||||| Sbjct: 41937 aacaaaaacaaacaaaaata 41918
>gb|AC163335.6| Mus musculus chromosome 7, clone RP24-149G13, complete sequence Length = 164660 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 59 acaacacgaacaaaaacaaacaaa 82 ||||||| |||||||||||||||| Sbjct: 2760 acaacaccaacaaaaacaaacaaa 2737
>gb|AC138641.10| Mus musculus chromosome 5, clone RP23-466K15, complete sequence Length = 175628 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 61 aacacgaacaaaaacaaacaaaaa 84 |||| ||||||||||||||||||| Sbjct: 60198 aacaagaacaaaaacaaacaaaaa 60175
>gb|AC139621.4| Artibeus jamaicensis clone 47H5, complete sequence Length = 103728 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 67 aacaaaaacaaacaaaaata 86 |||||||||||||||||||| Sbjct: 77850 aacaaaaacaaacaaaaata 77869
>gb|AC122469.4| Mus musculus chromosome 6 clone RP24-318I5, complete sequence Length = 181769 Score = 40.1 bits (20), Expect = 7.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 57 atacaacacgaacaaaaacaaacaaaaa 84 |||||||| |||||||||||||||||| Sbjct: 22455 atacaacaacaacaaaaacaaacaaaaa 22482
>gb|AY500829.1| Sylvia atricapilla D-loop, partial sequence; mitochondrial Length = 503 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 70 aaaaacaaacaaaaatacaa 89 |||||||||||||||||||| Sbjct: 43 aaaaacaaacaaaaatacaa 24
>gb|AC115728.11| Mus musculus chromosome 5, clone RP23-31J24, complete sequence Length = 211351 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 69 caaaaacaaacaaaaataca 88 |||||||||||||||||||| Sbjct: 180706 caaaaacaaacaaaaataca 180725
>gb|AC146460.3| Pan troglodytes BAC clone CH251-182B16 from X, complete sequence Length = 172064 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 67 aacaaaaacaaacaaaaata 86 |||||||||||||||||||| Sbjct: 75765 aacaaaaacaaacaaaaata 75784
>gb|AC129580.14| Mus musculus chromosome 14, clone RP24-149P3, complete sequence Length = 185100 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 67 aacaaaaacaaacaaaaata 86 |||||||||||||||||||| Sbjct: 89005 aacaaaaacaaacaaaaata 89024
>gb|AC068608.5| Mus musculus strain C57BL6/J chromosome 6 clone RP23-434O14, complete sequence Length = 191358 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 72 aaacaaacaaaaatacaaca 91 |||||||||||||||||||| Sbjct: 65037 aaacaaacaaaaatacaaca 65018
>ref|NM_001038839.1| Mus musculus purinergic receptor P2X, ligand-gated ion channel, 7 (P2rx7), transcript variant 3, mRNA Length = 2563 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 69 caaaaacaaacaaaaataca 88 |||||||||||||||||||| Sbjct: 1831 caaaaacaaacaaaaataca 1812
>ref|NM_011027.2| Mus musculus purinergic receptor P2X, ligand-gated ion channel, 7 (P2rx7), transcript variant 1, mRNA Length = 4931 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 69 caaaaacaaacaaaaataca 88 |||||||||||||||||||| Sbjct: 4199 caaaaacaaacaaaaataca 4180
>gb|AC159980.10| Mus musculus chromosome 3, clone RP24-171D20, complete sequence Length = 153366 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 67 aacaaaaacaaacaaaaata 86 |||||||||||||||||||| Sbjct: 128425 aacaaaaacaaacaaaaata 128406
>gb|AC148008.2| Mus musculus BAC clone RP23-253C14 from chromosome 18, complete sequence Length = 161965 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 67 aacaaaaacaaacaaaaata 86 |||||||||||||||||||| Sbjct: 28107 aacaaaaacaaacaaaaata 28088
>gb|AC147988.3| Mus musculus BAC clone RP24-459A9 from chromosome 18, complete sequence Length = 155208 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 59 acaacacgaacaaaaacaaacaaa 82 ||||||| |||||||||||||||| Sbjct: 144737 acaacaccaacaaaaacaaacaaa 144714
>gb|AC146432.3| Pan troglodytes BAC clone RP43-19M2 from 7, complete sequence Length = 177888 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 67 aacaaaaacaaacaaaaatacaac 90 |||||||||||||||||| ||||| Sbjct: 62388 aacaaaaacaaacaaaaaaacaac 62411
>gb|AC140408.3| Mus musculus BAC clone RP24-92P14 from chromosome Y, complete sequence Length = 189100 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 72 aaacaaacaaaaatacaaca 91 |||||||||||||||||||| Sbjct: 174497 aaacaaacaaaaatacaaca 174516
>gb|AC144794.2| Mus musculus BAC clone RP24-463B6 from chromosome 18, complete sequence Length = 152588 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 67 aacaaaaacaaacaaaaata 86 |||||||||||||||||||| Sbjct: 105844 aacaaaaacaaacaaaaata 105825
>gb|AC138109.3| Mus musculus BAC clone RP24-444I15 from chromosome 1, complete sequence Length = 209820 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 67 aacaaaaacaaacaaaaata 86 |||||||||||||||||||| Sbjct: 43149 aacaaaaacaaacaaaaata 43130
>gb|AC146633.2| Mus musculus BAC clone RP24-483C21 from chromosome Y, complete sequence Length = 172652 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 70 aaaaacaaacaaaaatacaa 89 |||||||||||||||||||| Sbjct: 167619 aaaaacaaacaaaaatacaa 167638
>gb|AC123711.14| Mus musculus chromosome 3, clone RP23-378N16, complete sequence Length = 209168 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 67 aacaaaaacaaacaaaaatacaac 90 |||||||||||||||||| ||||| Sbjct: 185811 aacaaaaacaaacaaaaaaacaac 185788
>gb|AC113504.10| Mus musculus chromosome 5, clone RP23-370G17, complete sequence Length = 219617 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 67 aacaaaaacaaacaaaaata 86 |||||||||||||||||||| Sbjct: 179559 aacaaaaacaaacaaaaata 179540
>gb|BC088517.1| Xenopus tropicalis lectin, mannose-binding 2-like, mRNA (cDNA clone IMAGE:6978826), partial cds Length = 1625 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 67 aacaaaaacaaacaaaaata 86 |||||||||||||||||||| Sbjct: 1270 aacaaaaacaaacaaaaata 1251
>gb|AC102374.7| Mus musculus chromosome 1, clone RP23-278G2, complete sequence Length = 170448 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 66 gaacaaaaacaaacaaaaatacaa 89 ||||||||||||||||||| |||| Sbjct: 113658 gaacaaaaacaaacaaaaaaacaa 113681
>gb|AC091396.4| Mus musculus strain C57BL6/J chromosome 6 clone RP23-298M8, complete sequence Length = 237142 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 71 aaaacaaacaaaaatacaac 90 |||||||||||||||||||| Sbjct: 115727 aaaacaaacaaaaatacaac 115746
>gb|AC163434.5| Mus musculus chromosome 7, clone RP23-320N24, complete sequence Length = 224337 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 67 aacaaaaacaaacaaaaata 86 |||||||||||||||||||| Sbjct: 41848 aacaaaaacaaacaaaaata 41829
>gb|AC105161.10| Mus musculus chromosome 1, clone RP24-73O16, complete sequence Length = 255501 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 61 aacacgaacaaaaacaaacaaaaa 84 |||| ||||||||||||||||||| Sbjct: 91108 aacaagaacaaaaacaaacaaaaa 91085
>gb|AC163092.4| Mus musculus chromosome 3, clone RP24-212F17, complete sequence Length = 150636 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 70 aaaaacaaacaaaaatacaa 89 |||||||||||||||||||| Sbjct: 35559 aaaaacaaacaaaaatacaa 35540
>gb|AC153510.10| Mus musculus 10 BAC RP23-151C4 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 197889 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 64 acgaacaaaaacaaacaaaa 83 |||||||||||||||||||| Sbjct: 500 acgaacaaaaacaaacaaaa 519
>gb|AC009974.10| Homo sapiens BAC clone RP11-459I19 from 2, complete sequence Length = 206855 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 71 aaaacaaacaaaaatacaac 90 |||||||||||||||||||| Sbjct: 149227 aaaacaaacaaaaatacaac 149246
>gb|AC132106.4| Mus musculus BAC clone RP24-240D2 from chromosome 17, complete sequence Length = 169722 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 64 acgaacaaaaacaaacaaaa 83 |||||||||||||||||||| Sbjct: 81166 acgaacaaaaacaaacaaaa 81185
>gb|AC073320.8| Homo sapiens BAC clone RP11-306G20 from 7, complete sequence Length = 185273 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 67 aacaaaaacaaacaaaaata 86 |||||||||||||||||||| Sbjct: 18541 aacaaaaacaaacaaaaata 18560
>gb|AC007683.5| Homo sapiens BAC clone RP11-401L13 from 7, complete sequence Length = 155735 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 67 aacaaaaacaaacaaaaata 86 |||||||||||||||||||| Sbjct: 151784 aacaaaaacaaacaaaaata 151803
>gb|AC134524.5| Mus musculus BAC clone RP24-496E20 from chromosome Y, complete sequence Length = 157055 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 72 aaacaaacaaaaatacaaca 91 |||||||||||||||||||| Sbjct: 90518 aaacaaacaaaaatacaaca 90499
>emb|CT005239.3| Pan troglodytes chromosome X clone PTB-125H24 map Xq28, complete sequence Length = 262483 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 72 aaacaaacaaaaatacaaca 91 |||||||||||||||||||| Sbjct: 61923 aaacaaacaaaaatacaaca 61904
>emb|CR847512.10| Zebrafish DNA sequence from clone DKEYP-13G11 in linkage group 9, complete sequence Length = 169581 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 66 gaacaaaaacaaacaaaaatacaa 89 ||||||||||||||||| |||||| Sbjct: 111752 gaacaaaaacaaacaaacatacaa 111729
>emb|CT025281.2| Xenopus tropicalis finished cDNA, clone TEgg129k12 Length = 2512 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 67 aacaaaaacaaacaaaaata 86 |||||||||||||||||||| Sbjct: 1280 aacaaaaacaaacaaaaata 1261
>gb|AC146257.3| Pan troglodytes BAC clone CH251-113A6 from Y, complete sequence Length = 174522 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 69 caaaaacaaacaaaaataca 88 |||||||||||||||||||| Sbjct: 153359 caaaaacaaacaaaaataca 153340
>gb|AC115117.5| Mus musculus BAC clone RP23-76J12 from chromosome 18, complete sequence Length = 197626 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 59 acaacacgaacaaaaacaaacaaa 82 ||||||| |||||||||||||||| Sbjct: 45116 acaacaccaacaaaaacaaacaaa 45093
>gb|AC124512.3| Mus musculus BAC clone RP23-444C17 from chromosome 18, complete sequence Length = 192528 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 67 aacaaaaacaaacaaaaata 86 |||||||||||||||||||| Sbjct: 157793 aacaaaaacaaacaaaaata 157774
>gb|AC124422.5| Mus musculus BAC clone RP24-326L13 from chromosome 9, complete sequence Length = 174375 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 67 aacaaaaacaaacaaaaata 86 |||||||||||||||||||| Sbjct: 116940 aacaaaaacaaacaaaaata 116959
>gb|AC123565.6| Homo sapiens 3 BAC RP11-539J20 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 156163 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 72 aaacaaacaaaaatacaaca 91 |||||||||||||||||||| Sbjct: 6951 aaacaaacaaaaatacaaca 6932
>gb|AC127268.2| Mus musculus BAC clone RP23-426K20 from chromosome 3, complete sequence Length = 182377 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 67 aacaaaaacaaacaaaaatacaac 90 |||| ||||||||||||||||||| Sbjct: 138881 aacagaaacaaacaaaaatacaac 138858
>gb|AC125181.4| Mus musculus BAC clone RP23-324L6 from chromosome 8, complete sequence Length = 223306 Score = 40.1 bits (20), Expect = 7.2 Identities = 26/28 (92%) Strand = Plus / Minus Query: 67 aacaaaaacaaacaaaaatacaacacga 94 |||||||||||||||||| | ||||||| Sbjct: 109704 aacaaaaacaaacaaaaaaaaaacacga 109677
>gb|AE014313.1| Homo sapiens chromosome 13q34 schizophrenia region contig 1 section 10 of 11 of the complete sequence Length = 250029 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 65 cgaacaaaaacaaacaaaaa 84 |||||||||||||||||||| Sbjct: 101551 cgaacaaaaacaaacaaaaa 101570
>emb|CR956362.5| Pig DNA sequence from clone CH242-98D1 on chromosome 17, complete sequence Length = 212503 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 67 aacaaaaacaaacaaaaatacaac 90 |||||||||||||||||| ||||| Sbjct: 20197 aacaaaaacaaacaaaaaaacaac 20174
>gb|AC072063.5| Homo sapiens BAC clone RP11-697B15 from 7, complete sequence Length = 136286 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 67 aacaaaaacaaacaaaaata 86 |||||||||||||||||||| Sbjct: 53946 aacaaaaacaaacaaaaata 53965
>gb|AC091731.4| Homo sapiens BAC clone RP11-343F24 from 7, complete sequence Length = 114253 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 70 aaaaacaaacaaaaatacaa 89 |||||||||||||||||||| Sbjct: 8417 aaaaacaaacaaaaatacaa 8398
>gb|AC113019.13| Mus musculus chromosome 7, clone RP23-185A21, complete sequence Length = 215975 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 68 acaaaaacaaacaaaaatacaaca 91 ||||||||||| |||||||||||| Sbjct: 167313 acaaaaacaaagaaaaatacaaca 167290
>gb|AC111141.7| Mus musculus chromosome 3, clone RP23-369G12, complete sequence Length = 241179 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 67 aacaaaaacaaacaaaaata 86 |||||||||||||||||||| Sbjct: 111281 aacaaaaacaaacaaaaata 111262
>gb|AC146224.2| Pan troglodytes BAC clone RP43-27B20 from 7, complete sequence Length = 141824 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 67 aacaaaaacaaacaaaaatacaac 90 |||||||||||||||||| ||||| Sbjct: 51961 aacaaaaacaaacaaaaaaacaac 51938
>gb|AC165175.2| Zea mays clone ZMMBBb-136N21, complete sequence Length = 129274 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 25 ctgttattagcttcagttcatgaa 48 ||||| |||||||||||||||||| Sbjct: 96883 ctgttgttagcttcagttcatgaa 96906
>gb|AC163109.5| Mus musculus 6 BAC RP23-172E18 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 199216 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 67 aacaaaaacaaacaaaaata 86 |||||||||||||||||||| Sbjct: 130222 aacaaaaacaaacaaaaata 130241
>emb|BX284678.3| Human DNA sequence from clone RP4-740O15 on chromosome 1 Contains a cytochrome c oxidase subunit VIb (COX6B) pseudogene, complete sequence Length = 27724 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 61 aacacgaacaaaaacaaacaaaaa 84 ||||| |||||||||||||||||| Sbjct: 15425 aacacaaacaaaaacaaacaaaaa 15402
>emb|AL591890.31| Human DNA sequence from clone RP11-54A22 on chromosome 9 Contains three novel genes, and the 5' end of the COL5A1 gene for collagen (type V) alpha 1, and a CpG island, complete sequence Length = 173415 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 194 ccagtgccagggacagagtt 213 |||||||||||||||||||| Sbjct: 122533 ccagtgccagggacagagtt 122552
>emb|AL513175.10| Human DNA sequence from clone RP11-142L4 on chromosome 1 Contains the 3' end of the RGS18 gene for regulator of G-protein signalling 18 and two processed pseudogenes similar to ATP-binding cassette, sub-family E (OABP), member (ABCE1), complete sequence Length = 94175 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 67 aacaaaaacaaacaaaaatacaac 90 |||||||||||||||||| ||||| Sbjct: 21376 aacaaaaacaaacaaaaaaacaac 21399
>emb|AL451075.15| Human DNA sequence from clone RP11-215I23 on chromosome 1 Contains the 3' end of the SOAT1 gene for sterol O-acyltransferase (acyl-Coenzyme A: cholesterol acyltransferase) 1, the 5' end of a novel gene, a MADS box transcription enhancer factor 2 polypeptide A (myocyte enhancer factor 2A) (MEF2A) pseudogene and a heterogeneous nuclear ribonucleoprotein A1 (HNRPA1) pseudogene, complete sequence Length = 153937 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 61 aacacgaacaaaaacaaacaaaaa 84 |||| ||||||||||||||||||| Sbjct: 110455 aacaagaacaaaaacaaacaaaaa 110478
>emb|AL513185.12| Human DNA sequence from clone RP11-167P22 on chromosome 10 Contains the 5' end of the CBARA1 gene for calcium binding atopy-related autoantigen 1, an HMG17 pseudogene, a cytochrome c oxidase subunit VIIc (COX7C) pseudogene, a novel gene, a novel pseudogene (FLJ12684) and a CpG island, complete sequence Length = 163632 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 69 caaaaacaaacaaaaatacaacac 92 ||||||||||||||||| |||||| Sbjct: 97229 caaaaacaaacaaaaatccaacac 97252
>emb|AL583828.4| Human DNA sequence from clone RP11-501I19 on chromosome 6 Contains a novel gene (ortholog of human ADG-90), the 5' end of a novel gene (FLJ20330), a novel gene, a ribosomal protein s4x (Rps4x) pseudogene and three CpG islands, complete sequence Length = 124659 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 70 aaaaacaaacaaaaatacaa 89 |||||||||||||||||||| Sbjct: 112587 aaaaacaaacaaaaatacaa 112568
>emb|AL391384.18| Human DNA sequence from clone RP11-555G22 on chromosome 13 Contains the 5' end of the gene for mitotic control protein (DIS3,KIAA1008), the 5' end of the gene for progesterone-induced blocking factor 1 (PIBF1) and a CpG island, complete sequence Length = 155270 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 67 aacaaaaacaaacaaaaata 86 |||||||||||||||||||| Sbjct: 68418 aacaaaaacaaacaaaaata 68399
>emb|AL392172.9| Human DNA sequence from clone RP11-452F19 on chromosome 1 Contains the 5' end of the gene for a novel protein (FLJ12806), the gene for a novel protein (FLJ32421), two novel genes, the 5' end of two variants of the DISP1 gene for dispatched homolog 1 (Drosophila) and a CpG island, complete sequence Length = 195849 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 70 aaaaacaaacaaaaatacaa 89 |||||||||||||||||||| Sbjct: 151242 aaaaacaaacaaaaatacaa 151223
>emb|AL365259.23| Human DNA sequence from clone RP11-624M8 on chromosome 6 Contains part of a novel gene, complete sequence Length = 106607 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 72 aaacaaacaaaaatacaaca 91 |||||||||||||||||||| Sbjct: 100301 aaacaaacaaaaatacaaca 100282
>emb|AL360182.15| Human DNA sequence from clone RP11-549L6 on chromosome 10 Contains the MXI1 gene for MAX interacting protein 1 (MAD2,MXD2), a ribosomal protein L21 (RPL21) pseudogene, a novel gene, the SPF30 gene for splicing factor 30, survival of motor neuron-related (SMNR) and three CpG islands, complete sequence Length = 145256 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 61 aacacgaacaaaaacaaacaaaaa 84 ||||| |||||||||||||||||| Sbjct: 132968 aacacaaacaaaaacaaacaaaaa 132945
>emb|AL358789.22| Human DNA sequence from clone RP11-507C22 on chromosome 1 Contains the 5' end of the MCOLN2 gene for mucolipin 2, the MCOLN3 gene for mucolipin 3, the gene for testis development protein NYD-SP29 (NYD-SP29) and two CpG islands, complete sequence Length = 165799 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 67 aacaaaaacaaacaaaaata 86 |||||||||||||||||||| Sbjct: 59333 aacaaaaacaaacaaaaata 59314
>gb|AE014829.1| Plasmodium falciparum 3D7 chromosome 10 section 1 of 7 of the complete sequence Length = 250078 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 67 aacaaaaacaaacaaaaata 86 |||||||||||||||||||| Sbjct: 164541 aacaaaaacaaacaaaaata 164522
>emb|AL358876.11| Human DNA sequence from clone RP11-431K24 on chromosome 1 Contains the 3' end of a novel gene (FLJ26758), a 52kDa eukaryotic translation initiation factor 2 subunit 3 gamma (EIF2S3) pseudogene and two novel genes, complete sequence Length = 171183 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 67 aacaaaaacaaacaaaaata 86 |||||||||||||||||||| Sbjct: 27459 aacaaaaacaaacaaaaata 27440
>emb|AL356857.10| Human DNA sequence from clone RP11-211O14 on chromosome 13, complete sequence Length = 88528 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 65 cgaacaaaaacaaacaaaaa 84 |||||||||||||||||||| Sbjct: 51691 cgaacaaaaacaaacaaaaa 51710
>emb|AL353623.16| Human DNA sequence from clone RP11-376H15 on chromosome 13 Contains the 5' end of a novel gene and a CpG island, complete sequence Length = 128538 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 68 acaaaaacaaacaaaaatac 87 |||||||||||||||||||| Sbjct: 44426 acaaaaacaaacaaaaatac 44445
>emb|AL354704.17| Human DNA sequence from clone RP11-630H9 on chromosome 9, complete sequence Length = 130718 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 67 aacaaaaacaaacaaaaata 86 |||||||||||||||||||| Sbjct: 66030 aacaaaaacaaacaaaaata 66011
>emb|AL353639.10| Human DNA sequence from clone RP11-664D14 on chromosome 9 Contains part of the MPDZ gene for multiple PDZ domain protein and GSSs, complete sequence Length = 103822 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 67 aacaaaaacaaacaaaaata 86 |||||||||||||||||||| Sbjct: 25522 aacaaaaacaaacaaaaata 25503
>emb|AL159161.11| Human DNA sequence from clone RP11-95N14 on chromosome 13 Contains the 5' end of the gene similar to G protein coupled receptor affecting testicular descent (H. sapiens)(GREAT), complete sequence Length = 90724 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 72 aaacaaacaaaaatacaaca 91 |||||||||||||||||||| Sbjct: 31631 aaacaaacaaaaatacaaca 31650
>emb|AL139002.18| Human DNA sequence from clone RP11-318G21 on chromosome 13q22.2-31.1 Contains the EDNRB gene for endothelin receptor type B, three novel genes and a CpG island, complete sequence Length = 183337 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 70 aaaaacaaacaaaaatacaa 89 |||||||||||||||||||| Sbjct: 170640 aaaaacaaacaaaaatacaa 170659
>emb|AL157884.9| Human DNA sequence from clone RP11-462B18 on chromosome 9p13.1-21.1 Contains a pseudogene similar to part of membrane guanylyl cyclase, a ribosomal protein S11 (RPS11) pseudogene, a novel gene and a CpG island, complete sequence Length = 176932 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 67 aacaaaaacaaacaaaaata 86 |||||||||||||||||||| Sbjct: 67043 aacaaaaacaaacaaaaata 67024
>emb|AL133378.16| Human DNA sequence from clone RP1-91B17 on chromosome 6q13-14.3 Contains part of the BAI3 gene for brain-specific angiogenesis inhibitor 3, complete sequence Length = 113826 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 360 tggcattggctactttttcc 379 |||||||||||||||||||| Sbjct: 45352 tggcattggctactttttcc 45371
>emb|AL117340.3|HSBA192P3 Human DNA sequence from clone RP11-192P3 on chromosome 10 Contains a novel gene, the 5' end of the TCF8 gene for transcription factor 8 (represses interleukin 2 expression) (BZP,ZEB,ZEB1,AREB6,ZFHEP,NIL-2A,ZFHX1A,NIL-2-A), a pseudogene similar to part of serine palmitoyltransferase, long chain base subunit 1 (SPTLC1) (HSAN, HSN1, LBC1, LCB1, SPT1, SPTI) and two CpG islands, complete sequence Length = 187517 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 67 aacaaaaacaaacaaaaata 86 |||||||||||||||||||| Sbjct: 64622 aacaaaaacaaacaaaaata 64641
>emb|AL109854.10|HSJ834A16 Human DNA sequence from clone RP5-834A16 on chromosome X Contains part of a gene similar to PGAM and a CpG Island, complete sequence Length = 47834 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 72 aaacaaacaaaaatacaaca 91 |||||||||||||||||||| Sbjct: 13719 aaacaaacaaaaatacaaca 13738
>gb|AC158342.4| Mus musculus chromosome 1, clone RP23-12H12, complete sequence Length = 224295 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 70 aaaaacaaacaaaaatacaa 89 |||||||||||||||||||| Sbjct: 201629 aaaaacaaacaaaaatacaa 201610
>emb|BX469918.7| Zebrafish DNA sequence from clone DKEYP-89H8 in linkage group 8, complete sequence Length = 86183 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 72 aaacaaacaaaaatacaaca 91 |||||||||||||||||||| Sbjct: 8305 aaacaaacaaaaatacaaca 8324
>emb|AL023096.1|HS398I9 Human DNA sequence from clone RP3-398I9 on chromosome 1p34.3-36.13 Contains the 3' end of the RUNX3 gene for runt-related transcription factor 3 and a CpG island, complete sequence Length = 95241 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 193 gccagtgccagggacagagt 212 |||||||||||||||||||| Sbjct: 71652 gccagtgccagggacagagt 71671
>emb|AL163202.2|HS21C002 Homo sapiens chromosome 21 segment HS21C002 Length = 340000 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 67 aacaaaaacaaacaaaaata 86 |||||||||||||||||||| Sbjct: 284903 aacaaaaacaaacaaaaata 284884
>gb|BC037670.1| Mus musculus, clone IMAGE:4486259, mRNA Length = 2414 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 67 aacaaaaacaaacaaaaata 86 |||||||||||||||||||| Sbjct: 716 aacaaaaacaaacaaaaata 735
>emb|CR860115.1| Pongo pygmaeus mRNA; cDNA DKFZp459C232 (from clone DKFZp459C232) Length = 3603 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 70 aaaaacaaacaaaaatacaa 89 |||||||||||||||||||| Sbjct: 1940 aaaaacaaacaaaaatacaa 1921
>gb|AC162804.2| Mus musculus BAC clone RP23-192H11 from chromosome 18, complete sequence Length = 183966 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 67 aacaaaaacaaacaaaaata 86 |||||||||||||||||||| Sbjct: 62045 aacaaaaacaaacaaaaata 62026
>gb|AC158763.6| Mus musculus chromosome 18, clone RP23-343L17, complete sequence Length = 204022 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 70 aaaaacaaacaaaaatacaa 89 |||||||||||||||||||| Sbjct: 7491 aaaaacaaacaaaaatacaa 7510
>emb|AL845512.9| Zebrafish DNA sequence from clone CH211-286M4 in linkage group 4 Contains the gene for a novel protein similar to mouse and human F-box protein 7 (FBXO7), the gene for a novel protein similar to human exportin tRNA (nuclear export receptor for tRNAs) (XPOT), the gene for a novel protein similar to parathyroid hormone-like hormone (PTHLH), the 3' end of a novel gene, a novel gene and two CpG islands, complete sequence Length = 192940 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 70 aaaaacaaacaaaaatacaa 89 |||||||||||||||||||| Sbjct: 54049 aaaaacaaacaaaaatacaa 54068
>emb|AL513025.13| Mouse DNA sequence from clone RP23-235O1 on chromosome 13 Contains the 5' end of a novel gene, the E2f3 gene for E2F transcription factor 3, a novel gene and two CpG islands, complete sequence Length = 197940 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 67 aacaaaaacaaacaaaaata 86 |||||||||||||||||||| Sbjct: 157392 aacaaaaacaaacaaaaata 157411
>emb|AL161589.2|ATCHRIV85 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 85 Length = 198750 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 67 aacaaaaacaaacaaaaata 86 |||||||||||||||||||| Sbjct: 36108 aacaaaaacaaacaaaaata 36127
>emb|AL022141.1|ATF23E13 Arabidopsis thaliana DNA chromosome 4, BAC clone F23E13 (ESSAII project) Length = 94695 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 67 aacaaaaacaaacaaaaata 86 |||||||||||||||||||| Sbjct: 59387 aacaaaaacaaacaaaaata 59406
>emb|CR847868.9| Zebrafish DNA sequence from clone DKEYP-99G4 in linkage group 8, complete sequence Length = 147399 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 67 aacaaaaacaaacaaaaata 86 |||||||||||||||||||| Sbjct: 108791 aacaaaaacaaacaaaaata 108772
>gb|AC158749.5| Mus musculus chromosome 7, clone RP23-285C18, complete sequence Length = 237364 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 68 acaaaaacaaacaaaaatacaaca 91 ||||||||||| |||||||||||| Sbjct: 18608 acaaaaacaaagaaaaatacaaca 18585
>gb|AC087455.7| Homo sapiens, clone RP11-143J24, complete sequence Length = 185644 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 67 aacaaaaacaaacaaaaata 86 |||||||||||||||||||| Sbjct: 23665 aacaaaaacaaacaaaaata 23646
>emb|AL645973.8| Mouse DNA sequence from clone RP23-287B6 on chromosome 11 Contains a pseudogene similar to part of ribosomal protein S2 (Rps2), a mitchondrial ribosomal protein S7 (Rpms7, MRP-S7) (Mrps7) pseudogene, a pseudogene similar to part of a novel protein, a novel gene and a eukaryotic translation initiation factor pseudogene, complete sequence Length = 196006 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 61 aacacgaacaaaaacaaacaaaaa 84 |||| ||||||||||||||||||| Sbjct: 164562 aacaagaacaaaaacaaacaaaaa 164585
>gb|AC004554.1| Homo sapiens X BAC GSHB-590J6 (Genome Systems Human BAC library) complete sequence Length = 195142 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 68 acaaaaacaaacaaaaatacaaca 91 ||||||||||||||||| |||||| Sbjct: 157603 acaaaaacaaacaaaaaaacaaca 157626
>emb|BX296523.4| Mouse DNA sequence from clone RP23-310L11 on chromosome 4 Contains a glyceraldehyde-3-phosphate dehydrogenase (Gapd) pseudogene, complete sequence Length = 18706 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 67 aacaaaaacaaacaaaaatacaac 90 |||||||||||||||||| ||||| Sbjct: 10823 aacaaaaacaaacaaaaaaacaac 10800
>emb|BX088694.4| Zebrafish DNA sequence from clone CH211-193C2 in linkage group 4 Contains the gene for a novel protein similar to vertebrate discoidin domain receptor family, member 2, a novel gene and two CpG islands, complete sequence Length = 150975 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 67 aacaaaaacaaacaaaaata 86 |||||||||||||||||||| Sbjct: 22388 aacaaaaacaaacaaaaata 22369 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 67 aacaaaaacaaacaaaaata 86 |||||||||||||||||||| Sbjct: 14407 aacaaaaacaaacaaaaata 14388
>emb|BX855595.2| Zebrafish DNA sequence from clone DKEY-102F17 in linkage group 7 Contains a novel gene and 5' end of the lmo1 gene for LIM domain only 1, complete sequence Length = 33172 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 69 caaaaacaaacaaaaataca 88 |||||||||||||||||||| Sbjct: 10555 caaaaacaaacaaaaataca 10574
>emb|BX465851.5| Zebrafish DNA sequence from clone CH211-215H21 in linkage group 6, complete sequence Length = 145469 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 68 acaaaaacaaacaaaaatac 87 |||||||||||||||||||| Sbjct: 79559 acaaaaacaaacaaaaatac 79540
>gb|AC158345.8| Mus musculus chromosome 7, clone RP23-271M19, complete sequence Length = 188354 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 59 acaacacgaacaaaaacaaacaaa 82 ||||||| |||||||||||||||| Sbjct: 75661 acaacaccaacaaaaacaaacaaa 75684
>gb|AC060764.13| Homo sapiens chromosome 8, clone RP11-626A5, complete sequence Length = 184338 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 67 aacaaaaacaaacaaaaata 86 |||||||||||||||||||| Sbjct: 40768 aacaaaaacaaacaaaaata 40749
>emb|CR354422.7| Zebrafish DNA sequence from clone CH211-129O4 in linkage group 20, complete sequence Length = 177570 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 70 aaaaacaaacaaaaatacaa 89 |||||||||||||||||||| Sbjct: 6238 aaaaacaaacaaaaatacaa 6257
>emb|BX510356.7| Zebrafish DNA sequence from clone DKEY-6I22 in linkage group 14, complete sequence Length = 167499 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 70 aaaaacaaacaaaaatacaa 89 |||||||||||||||||||| Sbjct: 23173 aaaaacaaacaaaaatacaa 23154
>gb|AE014175.1| Mus musculus piebald deletion region section 3 of 11 of the complete sequence Length = 404829 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 216 cctgaagagaagcgagaaca 235 |||||||||||||||||||| Sbjct: 377829 cctgaagagaagcgagaaca 377810
>gb|AC159255.3| Mus musculus BAC clone RP24-89C11 from chromosome 3, complete sequence Length = 216011 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 67 aacaaaaacaaacaaaaatacaac 90 |||||||||||||||||| ||||| Sbjct: 156155 aacaaaaacaaacaaaaaaacaac 156132
>gb|AC078816.16| Homo sapiens 3 BAC RP11-600P18 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 183861 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 67 aacaaaaacaaacaaaaata 86 |||||||||||||||||||| Sbjct: 165606 aacaaaaacaaacaaaaata 165587
>gb|AC044836.9| Homo sapiens chromosome 8, clone RP11-767C6, complete sequence Length = 157493 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 67 aacaaaaacaaacaaaaata 86 |||||||||||||||||||| Sbjct: 87079 aacaaaaacaaacaaaaata 87060
>gb|AC009930.7| Homo sapiens chromosome 8, clone RP11-114O8, complete sequence Length = 165662 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 61 aacacgaacaaaaacaaacaaaaa 84 ||||| |||||||||||||||||| Sbjct: 101829 aacacaaacaaaaacaaacaaaaa 101852
>gb|AC040963.6| Homo sapiens chromosome 18, clone RP11-685A21, complete sequence Length = 146198 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 70 aaaaacaaacaaaaatacaa 89 |||||||||||||||||||| Sbjct: 99068 aaaaacaaacaaaaatacaa 99087
>dbj|BS000591.1| Pan troglodytes chromosome Y clone:PTB-113D22, complete sequence Length = 188847 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 69 caaaaacaaacaaaaataca 88 |||||||||||||||||||| Sbjct: 90585 caaaaacaaacaaaaataca 90604
>gb|AC004666.9| Homo sapiens chromosome 17, clone CTC-468F23, complete sequence Length = 75120 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 70 aaaaacaaacaaaaatacaa 89 |||||||||||||||||||| Sbjct: 25584 aaaaacaaacaaaaatacaa 25565
>gb|DP000054.1| Pan troglodytes chromosome Y, partial sequence Length = 23952694 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 69 caaaaacaaacaaaaataca 88 |||||||||||||||||||| Sbjct: 16979447 caaaaacaaacaaaaataca 16979428
>gb|AC025905.3| Oryza sativa (japonica cultivar-group) chromosome 10 clone nbxb0018F16, complete sequence Length = 179157 Score = 40.1 bits (20), Expect = 7.2 Identities = 26/28 (92%) Strand = Plus / Minus Query: 71 aaaacaaacaaaaatacaacacgaacca 98 |||| ||| ||||||||||||||||||| Sbjct: 152789 aaaataaaaaaaaatacaacacgaacca 152762
>gb|AC182359.3| Spermophilus tridecemlineatus clone VMRC20-329J14, complete sequence Length = 154296 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 67 aacaaaaacaaacaaaaata 86 |||||||||||||||||||| Sbjct: 153020 aacaaaaacaaacaaaaata 153001
>gb|AC034258.10| Oryza sativa chromosome 10 BAC OSJNBb0011A08 genomic sequence, complete sequence Length = 117157 Score = 40.1 bits (20), Expect = 7.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 71 aaaacaaacaaaaatacaacacgaacca 98 |||| ||| ||||||||||||||||||| Sbjct: 84183 aaaataaaaaaaaatacaacacgaacca 84210
>gb|AC106854.5| Homo sapiens chromosome 18, clone CTD-2302G2, complete sequence Length = 116879 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 67 aacaaaaacaaacaaaaata 86 |||||||||||||||||||| Sbjct: 76568 aacaaaaacaaacaaaaata 76587
>gb|AC069382.9| Homo sapiens chromosome 15, clone RP11-360J18, complete sequence Length = 193681 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 67 aacaaaaacaaacaaaaata 86 |||||||||||||||||||| Sbjct: 99181 aacaaaaacaaacaaaaata 99162
>gb|AC104448.2| Homo sapiens chromosome 3 clone RP11-24C3, complete sequence Length = 155470 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 67 aacaaaaacaaacaaaaatacaac 90 |||||||||||||||||| ||||| Sbjct: 53696 aacaaaaacaaacaaaaaaacaac 53719
>gb|AC009509.7| Homo sapiens 12p11-37.2-54.4 BAC RP11-1060J15 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 192690 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 67 aacaaaaacaaacaaaaata 86 |||||||||||||||||||| Sbjct: 46854 aacaaaaacaaacaaaaata 46873
>gb|AC073613.16| Homo sapiens Xp BAC RP11-797I1 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 137432 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 68 acaaaaacaaacaaaaatacaaca 91 ||||||||||||||||| |||||| Sbjct: 133734 acaaaaacaaacaaaaaaacaaca 133711
>gb|AC096588.1| Homo sapiens BAC clone RP11-725D20 from 4, complete sequence Length = 150864 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 59 acaacacgaacaaaaacaaacaaa 82 ||||||| |||||||||||||||| Sbjct: 103096 acaacacaaacaaaaacaaacaaa 103119
>gb|AC040926.5| Homo sapiens chromosome 8, clone RP11-776K3, complete sequence Length = 204177 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 72 aaacaaacaaaaatacaaca 91 |||||||||||||||||||| Sbjct: 9304 aaacaaacaaaaatacaaca 9323
>dbj|AK137774.1| Mus musculus 16 days neonate thymus cDNA, RIKEN full-length enriched library, clone:A130003O08 product:unclassifiable, full insert sequence Length = 1190 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 67 aacaaaaacaaacaaaaatacaac 90 |||||||||||||||||| ||||| Sbjct: 258 aacaaaaacaaacaaaaaaacaac 281
>gb|AC021760.9| Homo sapiens chromosome 8, clone RP11-433L7, complete sequence Length = 183059 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 72 aaacaaacaaaaatacaaca 91 |||||||||||||||||||| Sbjct: 181626 aaacaaacaaaaatacaaca 181645
>gb|AC108173.1| Homo sapiens chromosome 5 clone RP11-526L22, complete sequence Length = 174346 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 70 aaaaacaaacaaaaatacaa 89 |||||||||||||||||||| Sbjct: 138324 aaaaacaaacaaaaatacaa 138305
>gb|AC093926.6| Genomic sequence for Mus musculus, clone RP23-342N3, complete sequence Length = 210913 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 67 aacaaaaacaaacaaaaata 86 |||||||||||||||||||| Sbjct: 207624 aacaaaaacaaacaaaaata 207643
>gb|AC134860.4| Mus musculus BAC clone RP23-388A16 from chromosome 13, complete sequence Length = 206634 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 67 aacaaaaacaaacaaaaatacaac 90 |||||||| ||||||||||||||| Sbjct: 107492 aacaaaaataaacaaaaatacaac 107469
>gb|DP000001.1| Artibeus jamaicensis target 1 genomic scaffold Length = 584809 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 67 aacaaaaacaaacaaaaata 86 |||||||||||||||||||| Sbjct: 248681 aacaaaaacaaacaaaaata 248700
>gb|AC008664.6| Homo sapiens chromosome 5 clone CTB-34B5, complete sequence Length = 132185 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 67 aacaaaaacaaacaaaaata 86 |||||||||||||||||||| Sbjct: 40821 aacaaaaacaaacaaaaata 40802
>gb|AF545078.1| Trypanosoma cruzi isolate Esmeraldo histone H1 genes, partial cds Length = 480 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 67 aacaaaaacaaacaaaaata 86 |||||||||||||||||||| Sbjct: 181 aacaaaaacaaacaaaaata 162
>gb|AF545077.1| Trypanosoma cruzi isolate CL Brenner histone H1 genes, partial cds Length = 476 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 67 aacaaaaacaaacaaaaata 86 |||||||||||||||||||| Sbjct: 178 aacaaaaacaaacaaaaata 159
>gb|AF545076.1| Trypanosoma cruzi isolate Sylvio X10 histone H1 genes, partial cds Length = 481 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 67 aacaaaaacaaacaaaaata 86 |||||||||||||||||||| Sbjct: 181 aacaaaaacaaacaaaaata 162
>gb|AF545075.1| Trypanosoma cruzi isolate Dm28c histone H1 genes, partial cds Length = 481 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 67 aacaaaaacaaacaaaaata 86 |||||||||||||||||||| Sbjct: 180 aacaaaaacaaacaaaaata 161 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6,401,300 Number of Sequences: 3902068 Number of extensions: 6401300 Number of successful extensions: 276740 Number of sequences better than 10.0: 352 Number of HSP's better than 10.0 without gapping: 352 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 274592 Number of HSP's gapped (non-prelim): 2148 length of query: 534 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 511 effective length of database: 17,143,297,704 effective search space: 8760225126744 effective search space used: 8760225126744 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)