ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbags26g04 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_450275.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1755 Score = 355 bits (179), Expect = 1e-94 Identities = 460/554 (83%) Strand = Plus / Minus Query: 193 gaacagaagctgagctcaagaggaatcctccgaaaagttgacagccaggtcccagtagtg 252 ||||||||||| ||||||||| ||||| || || || ||||||||||||||||||||||| Sbjct: 1458 gaacagaagctcagctcaagatgaatcttctgagaaattgacagccaggtcccagtagtg 1399 Query: 253 cggaactttagcatctgtaaacaccttcttggcagcagcctcgctccgacactgatgcac 312 |||||| |||||||| |||||||||||||||||||||||| || || || | || || Sbjct: 1398 tggaactgaagcatctgcaaacaccttcttggcagcagcctcactacggcaattgtgtac 1339 Query: 313 accgaacctcggaaaggtgggcttcaccacgctaccctgccagactaacacgcagctatt 372 || |||||| | |||| ||| || |||| || ||||||||||| || | |||||||| Sbjct: 1338 actgaacctggtaaagcagggttttgccacactcccctgccagaccaatgcacagctatt 1279 Query: 373 catcggcttgtcttgttcctcgtcggcaccatcctcaccaccaactgcagaggcccagtc 432 || ||||||||| |||||| || ||| |||| ||| || |||| |||| |||||||| Sbjct: 1278 cacaggcttgtctgattcctcatcagcatcatcatcatcatcaaccgcagcagcccagtc 1219 Query: 433 aatccggttcagcatcagcttattgtacctcttgatcgacttcctccctccttccacaac 492 ||| |||||||||||||||||||||||||| ||||| |||||| |||||||||| || || Sbjct: 1218 aatacggttcagcatcagcttattgtaccttttgattgacttcttccctccttcaacgac 1159 Query: 493 cacaacacttataccatctgtgataaccgccgcaccagtcagccggttctcctgggcatt 552 |||||||| || ||||| | || || || |||||||| || |||||||| || ||||| Sbjct: 1158 aacaacactgatcccatccgcaatgactgcagcaccagtaagacggttctcttgtgcatt 1099 Query: 553 cacgtccactttgaagcgggtctgagggtgtgacaggtctctgattctgtaaacacaaac 612 || ||||| || || || ||||| || ||||||||||||||||||||||| |||||||| Sbjct: 1098 tacatccaccttaaaacgtgtctgcggatgtgacaggtctctgattctgtacacacaaac 1039 Query: 613 aatacagccaagtgtgttgggatcatcaaaaagcttcctctnctttttctctcggcgctc 672 ||| | | |||||| ||||| |||||||||||||||| || || || |||||||| Sbjct: 1038 tatagtctccaatgtgttaggatcttcaaaaagcttcctctctttcttttcacggcgctc 979 Query: 673 tgatggtgtgagtttgcgggcaatgttgcggtccacgtgagcctgctcacgctctgcagc 732 |||||| ||||| ||||| ||||||||||| || || ||||||||||||||||||||||| Sbjct: 978 tgatggagtgagcttgcgagcaatgttgcgatctacatgagcctgctcacgctctgcagc 919 Query: 733 agctgttcgtattt 746 ||| || ||||||| Sbjct: 918 agcagtccgtattt 905
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 355 bits (179), Expect = 1e-94 Identities = 460/554 (83%) Strand = Plus / Plus Query: 193 gaacagaagctgagctcaagaggaatcctccgaaaagttgacagccaggtcccagtagtg 252 ||||||||||| ||||||||| ||||| || || || ||||||||||||||||||||||| Sbjct: 3697240 gaacagaagctcagctcaagatgaatcttctgagaaattgacagccaggtcccagtagtg 3697299 Query: 253 cggaactttagcatctgtaaacaccttcttggcagcagcctcgctccgacactgatgcac 312 |||||| |||||||| |||||||||||||||||||||||| || || || | || || Sbjct: 3697300 tggaactgaagcatctgcaaacaccttcttggcagcagcctcactacggcaattgtgtac 3697359 Query: 313 accgaacctcggaaaggtgggcttcaccacgctaccctgccagactaacacgcagctatt 372 || |||||| | |||| ||| || |||| || ||||||||||| || | |||||||| Sbjct: 3697360 actgaacctggtaaagcagggttttgccacactcccctgccagaccaatgcacagctatt 3697419 Query: 373 catcggcttgtcttgttcctcgtcggcaccatcctcaccaccaactgcagaggcccagtc 432 || ||||||||| |||||| || ||| |||| ||| || |||| |||| |||||||| Sbjct: 3697420 cacaggcttgtctgattcctcatcagcatcatcatcatcatcaaccgcagcagcccagtc 3697479 Query: 433 aatccggttcagcatcagcttattgtacctcttgatcgacttcctccctccttccacaac 492 ||| |||||||||||||||||||||||||| ||||| |||||| |||||||||| || || Sbjct: 3697480 aatacggttcagcatcagcttattgtaccttttgattgacttcttccctccttcaacgac 3697539 Query: 493 cacaacacttataccatctgtgataaccgccgcaccagtcagccggttctcctgggcatt 552 |||||||| || ||||| | || || || |||||||| || |||||||| || ||||| Sbjct: 3697540 aacaacactgatcccatccgcaatgactgcagcaccagtaagacggttctcttgtgcatt 3697599 Query: 553 cacgtccactttgaagcgggtctgagggtgtgacaggtctctgattctgtaaacacaaac 612 || ||||| || || || ||||| || ||||||||||||||||||||||| |||||||| Sbjct: 3697600 tacatccaccttaaaacgtgtctgcggatgtgacaggtctctgattctgtacacacaaac 3697659 Query: 613 aatacagccaagtgtgttgggatcatcaaaaagcttcctctnctttttctctcggcgctc 672 ||| | | |||||| ||||| |||||||||||||||| || || || |||||||| Sbjct: 3697660 tatagtctccaatgtgttaggatcttcaaaaagcttcctctctttcttttcacggcgctc 3697719 Query: 673 tgatggtgtgagtttgcgggcaatgttgcggtccacgtgagcctgctcacgctctgcagc 732 |||||| ||||| ||||| ||||||||||| || || ||||||||||||||||||||||| Sbjct: 3697720 tgatggagtgagcttgcgagcaatgttgcgatctacatgagcctgctcacgctctgcagc 3697779 Query: 733 agctgttcgtattt 746 ||| || ||||||| Sbjct: 3697780 agcagtccgtattt 3697793
>dbj|AP005578.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1695_A02 Length = 156214 Score = 355 bits (179), Expect = 1e-94 Identities = 460/554 (83%) Strand = Plus / Plus Query: 193 gaacagaagctgagctcaagaggaatcctccgaaaagttgacagccaggtcccagtagtg 252 ||||||||||| ||||||||| ||||| || || || ||||||||||||||||||||||| Sbjct: 105501 gaacagaagctcagctcaagatgaatcttctgagaaattgacagccaggtcccagtagtg 105560 Query: 253 cggaactttagcatctgtaaacaccttcttggcagcagcctcgctccgacactgatgcac 312 |||||| |||||||| |||||||||||||||||||||||| || || || | || || Sbjct: 105561 tggaactgaagcatctgcaaacaccttcttggcagcagcctcactacggcaattgtgtac 105620 Query: 313 accgaacctcggaaaggtgggcttcaccacgctaccctgccagactaacacgcagctatt 372 || |||||| | |||| ||| || |||| || ||||||||||| || | |||||||| Sbjct: 105621 actgaacctggtaaagcagggttttgccacactcccctgccagaccaatgcacagctatt 105680 Query: 373 catcggcttgtcttgttcctcgtcggcaccatcctcaccaccaactgcagaggcccagtc 432 || ||||||||| |||||| || ||| |||| ||| || |||| |||| |||||||| Sbjct: 105681 cacaggcttgtctgattcctcatcagcatcatcatcatcatcaaccgcagcagcccagtc 105740 Query: 433 aatccggttcagcatcagcttattgtacctcttgatcgacttcctccctccttccacaac 492 ||| |||||||||||||||||||||||||| ||||| |||||| |||||||||| || || Sbjct: 105741 aatacggttcagcatcagcttattgtaccttttgattgacttcttccctccttcaacgac 105800 Query: 493 cacaacacttataccatctgtgataaccgccgcaccagtcagccggttctcctgggcatt 552 |||||||| || ||||| | || || || |||||||| || |||||||| || ||||| Sbjct: 105801 aacaacactgatcccatccgcaatgactgcagcaccagtaagacggttctcttgtgcatt 105860 Query: 553 cacgtccactttgaagcgggtctgagggtgtgacaggtctctgattctgtaaacacaaac 612 || ||||| || || || ||||| || ||||||||||||||||||||||| |||||||| Sbjct: 105861 tacatccaccttaaaacgtgtctgcggatgtgacaggtctctgattctgtacacacaaac 105920 Query: 613 aatacagccaagtgtgttgggatcatcaaaaagcttcctctnctttttctctcggcgctc 672 ||| | | |||||| ||||| |||||||||||||||| || || || |||||||| Sbjct: 105921 tatagtctccaatgtgttaggatcttcaaaaagcttcctctctttcttttcacggcgctc 105980 Query: 673 tgatggtgtgagtttgcgggcaatgttgcggtccacgtgagcctgctcacgctctgcagc 732 |||||| ||||| ||||| ||||||||||| || || ||||||||||||||||||||||| Sbjct: 105981 tgatggagtgagcttgcgagcaatgttgcgatctacatgagcctgctcacgctctgcagc 106040 Query: 733 agctgttcgtattt 746 ||| || ||||||| Sbjct: 106041 agcagtccgtattt 106054
>dbj|AP005553.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1116_H10 Length = 101054 Score = 355 bits (179), Expect = 1e-94 Identities = 460/554 (83%) Strand = Plus / Plus Query: 193 gaacagaagctgagctcaagaggaatcctccgaaaagttgacagccaggtcccagtagtg 252 ||||||||||| ||||||||| ||||| || || || ||||||||||||||||||||||| Sbjct: 4542 gaacagaagctcagctcaagatgaatcttctgagaaattgacagccaggtcccagtagtg 4601 Query: 253 cggaactttagcatctgtaaacaccttcttggcagcagcctcgctccgacactgatgcac 312 |||||| |||||||| |||||||||||||||||||||||| || || || | || || Sbjct: 4602 tggaactgaagcatctgcaaacaccttcttggcagcagcctcactacggcaattgtgtac 4661 Query: 313 accgaacctcggaaaggtgggcttcaccacgctaccctgccagactaacacgcagctatt 372 || |||||| | |||| ||| || |||| || ||||||||||| || | |||||||| Sbjct: 4662 actgaacctggtaaagcagggttttgccacactcccctgccagaccaatgcacagctatt 4721 Query: 373 catcggcttgtcttgttcctcgtcggcaccatcctcaccaccaactgcagaggcccagtc 432 || ||||||||| |||||| || ||| |||| ||| || |||| |||| |||||||| Sbjct: 4722 cacaggcttgtctgattcctcatcagcatcatcatcatcatcaaccgcagcagcccagtc 4781 Query: 433 aatccggttcagcatcagcttattgtacctcttgatcgacttcctccctccttccacaac 492 ||| |||||||||||||||||||||||||| ||||| |||||| |||||||||| || || Sbjct: 4782 aatacggttcagcatcagcttattgtaccttttgattgacttcttccctccttcaacgac 4841 Query: 493 cacaacacttataccatctgtgataaccgccgcaccagtcagccggttctcctgggcatt 552 |||||||| || ||||| | || || || |||||||| || |||||||| || ||||| Sbjct: 4842 aacaacactgatcccatccgcaatgactgcagcaccagtaagacggttctcttgtgcatt 4901 Query: 553 cacgtccactttgaagcgggtctgagggtgtgacaggtctctgattctgtaaacacaaac 612 || ||||| || || || ||||| || ||||||||||||||||||||||| |||||||| Sbjct: 4902 tacatccaccttaaaacgtgtctgcggatgtgacaggtctctgattctgtacacacaaac 4961 Query: 613 aatacagccaagtgtgttgggatcatcaaaaagcttcctctnctttttctctcggcgctc 672 ||| | | |||||| ||||| |||||||||||||||| || || || |||||||| Sbjct: 4962 tatagtctccaatgtgttaggatcttcaaaaagcttcctctctttcttttcacggcgctc 5021 Query: 673 tgatggtgtgagtttgcgggcaatgttgcggtccacgtgagcctgctcacgctctgcagc 732 |||||| ||||| ||||| ||||||||||| || || ||||||||||||||||||||||| Sbjct: 5022 tgatggagtgagcttgcgagcaatgttgcgatctacatgagcctgctcacgctctgcagc 5081 Query: 733 agctgttcgtattt 746 ||| || ||||||| Sbjct: 5082 agcagtccgtattt 5095
>dbj|AK068062.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013129F10, full insert sequence Length = 1517 Score = 347 bits (175), Expect = 3e-92 Identities = 459/554 (82%) Strand = Plus / Minus Query: 193 gaacagaagctgagctcaagaggaatcctccgaaaagttgacagccaggtcccagtagtg 252 ||||||||||| ||||||||| ||||| || || || ||||||||||||||||||||||| Sbjct: 1149 gaacagaagctcagctcaagatgaatcttctgagaaattgacagccaggtcccagtagtg 1090 Query: 253 cggaactttagcatctgtaaacaccttcttggcagcagcctcgctccgacactgatgcac 312 |||||| |||||||| |||||||||||||||||||||||| || || || | || || Sbjct: 1089 tggaactgaagcatctgcaaacaccttcttggcagcagcctcactacggcaattgtgtac 1030 Query: 313 accgaacctcggaaaggtgggcttcaccacgctaccctgccagactaacacgcagctatt 372 || |||||| | |||| ||| || |||| || ||||||||||| || | |||||||| Sbjct: 1029 actgaacctggtaaagcagggttttgccacactcccctgccagaccaatgcacagctatt 970 Query: 373 catcggcttgtcttgttcctcgtcggcaccatcctcaccaccaactgcagaggcccagtc 432 || ||||||||| |||||| || ||| |||| ||| || |||| |||| |||||||| Sbjct: 969 cacaggcttgtctgattcctcatcagcatcatcatcatcatcaaccgcagcagcccagtc 910 Query: 433 aatccggttcagcatcagcttattgtacctcttgatcgacttcctccctccttccacaac 492 ||| |||||||||||||||||||||||||| ||||| |||||| |||||||||| || || Sbjct: 909 aatacggttcagcatcagcttattgtaccttttgattgacttcttccctccttcaacgac 850 Query: 493 cacaacacttataccatctgtgataaccgccgcaccagtcagccggttctcctgggcatt 552 |||||||| || ||||| | || || || |||||||| || |||||||| || ||||| Sbjct: 849 aacaacactgatcccatccgcaatgactgcagcaccagtaagacggttctcttgtgcatt 790 Query: 553 cacgtccactttgaagcgggtctgagggtgtgacaggtctctgattctgtaaacacaaac 612 || ||||| || || || ||||| || || |||||||||||||||||||| |||||||| Sbjct: 789 tacatccaccttaaaacgtgtctgcggatgagacaggtctctgattctgtacacacaaac 730 Query: 613 aatacagccaagtgtgttgggatcatcaaaaagcttcctctnctttttctctcggcgctc 672 ||| | | |||||| ||||| |||||||||||||||| || || || |||||||| Sbjct: 729 tatagtctccaatgtgttaggatcttcaaaaagcttcctctctttcttttcacggcgctc 670 Query: 673 tgatggtgtgagtttgcgggcaatgttgcggtccacgtgagcctgctcacgctctgcagc 732 |||||| ||||| ||||| ||||||||||| || || ||||||||||||||||||||||| Sbjct: 669 tgatggagtgagcttgcgagcaatgttgcgatctacatgagcctgctcacgctctgcagc 610 Query: 733 agctgttcgtattt 746 ||| || ||||||| Sbjct: 609 agcagtccgtattt 596
>dbj|AK059394.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-026-H12, full insert sequence Length = 1755 Score = 347 bits (175), Expect = 3e-92 Identities = 459/554 (82%) Strand = Plus / Minus Query: 193 gaacagaagctgagctcaagaggaatcctccgaaaagttgacagccaggtcccagtagtg 252 ||||||||||| ||||||||| ||||| || || || ||||||||||||||||||||||| Sbjct: 1458 gaacagaagctcagctcaagatgaatcttctgagaaattgacagccaggtcccagtagtg 1399 Query: 253 cggaactttagcatctgtaaacaccttcttggcagcagcctcgctccgacactgatgcac 312 |||||| |||||||| ||||||| |||||||||||||||| || || || | || || Sbjct: 1398 tggaactgaagcatctgcaaacaccctcttggcagcagcctcactacggcaattgtgtac 1339 Query: 313 accgaacctcggaaaggtgggcttcaccacgctaccctgccagactaacacgcagctatt 372 || |||||| | |||| ||| || |||| || ||||||||||| || | |||||||| Sbjct: 1338 actgaacctggtaaagcagggttttgccacactcccctgccagaccaatgcacagctatt 1279 Query: 373 catcggcttgtcttgttcctcgtcggcaccatcctcaccaccaactgcagaggcccagtc 432 || ||||||||| |||||| || ||| |||| ||| || |||| |||| |||||||| Sbjct: 1278 cacaggcttgtctgattcctcatcagcatcatcatcatcatcaaccgcagcagcccagtc 1219 Query: 433 aatccggttcagcatcagcttattgtacctcttgatcgacttcctccctccttccacaac 492 ||| |||||||||||||||||||||||||| ||||| |||||| |||||||||| || || Sbjct: 1218 aatacggttcagcatcagcttattgtaccttttgattgacttcttccctccttcaacgac 1159 Query: 493 cacaacacttataccatctgtgataaccgccgcaccagtcagccggttctcctgggcatt 552 |||||||| || ||||| | || || || |||||||| || |||||||| || ||||| Sbjct: 1158 aacaacactgatcccatccgcaatgactgcagcaccagtaagacggttctcttgtgcatt 1099 Query: 553 cacgtccactttgaagcgggtctgagggtgtgacaggtctctgattctgtaaacacaaac 612 || ||||| || || || ||||| || ||||||||||||||||||||||| |||||||| Sbjct: 1098 tacatccaccttaaaacgtgtctgcggatgtgacaggtctctgattctgtacacacaaac 1039 Query: 613 aatacagccaagtgtgttgggatcatcaaaaagcttcctctnctttttctctcggcgctc 672 ||| | | |||||| ||||| |||||||||||||||| || || || |||||||| Sbjct: 1038 tatagtctccaatgtgttaggatcttcaaaaagcttcctctctttcttttcacggcgctc 979 Query: 673 tgatggtgtgagtttgcgggcaatgttgcggtccacgtgagcctgctcacgctctgcagc 732 |||||| ||||| ||||| ||||||||||| || || ||||||||||||||||||||||| Sbjct: 978 tgatggagtgagcttgcgagcaatgttgcgatctacatgagcctgctcacgctctgcagc 919 Query: 733 agctgttcgtattt 746 ||| || ||||||| Sbjct: 918 agcagtccgtattt 905
>gb|AY110939.1| Zea mays CL9080_-1 mRNA sequence Length = 504 Score = 46.1 bits (23), Expect = 0.17 Identities = 50/59 (84%) Strand = Plus / Plus Query: 326 aaggtgggcttcaccacgctaccctgccagactaacacgcagctattcatcggcttgtc 384 |||||||| || |||| |||||||||||||| || || |||||||||| |||||||| Sbjct: 246 aaggtgggttttgccacactaccctgccagaccaatacacagctattcactggcttgtc 304 Score = 42.1 bits (21), Expect = 2.6 Identities = 57/69 (82%) Strand = Plus / Plus Query: 407 tcaccaccaactgcagaggcccagtcaatccggttcagcatcagcttattgtacctcttg 466 ||||||||||| |||| | |||||| || ||||| ||||| |||||||| || || ||| Sbjct: 327 tcaccaccaacagcagcaggccagtctatacggtttagcatgagcttattatatcttttg 386 Query: 467 atcgacttc 475 || |||||| Sbjct: 387 attgacttc 395
>dbj|AP004250.1| Lotus japonicus genomic DNA, chromosome 5, clone:LjT47K21, TM0260, complete sequence Length = 79947 Score = 46.1 bits (23), Expect = 0.17 Identities = 79/98 (80%) Strand = Plus / Plus Query: 635 tcatcaaaaagcttcctctnctttttctctcggcgctctgatggtgtgagtttgcgggca 694 |||||||| |||||||||| ||| ||||| || |||| | || ||||| ||||| ||| Sbjct: 44388 tcatcaaacagcttcctctccttcttctcacgcagctcagcaggagtgagcttgcgagca 44447 Query: 695 atgttgcggtccacgtgagcctgctcacgctctgcagc 732 ||||| | || | ||| |||||||||||||| ||||| Sbjct: 44448 atgttcctatctatgtgggcctgctcacgctcagcagc 44485
>gb|AY642689.1| Fragaria x ananassa putative splicing factor 3b subunit 3 mRNA, partial cds Length = 112 Score = 44.1 bits (22), Expect = 0.66 Identities = 22/22 (100%) Strand = Plus / Minus Query: 398 gcaccatcctcaccaccaactg 419 |||||||||||||||||||||| Sbjct: 89 gcaccatcctcaccaccaactg 68
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome Length = 9105828 Score = 44.1 bits (22), Expect = 0.66 Identities = 22/22 (100%) Strand = Plus / Minus Query: 391 ctcgtcggcaccatcctcacca 412 |||||||||||||||||||||| Sbjct: 6212021 ctcgtcggcaccatcctcacca 6212000
>gb|BC036775.1| Homo sapiens G protein-coupled receptor 88, mRNA (cDNA clone IMAGE:5729354), partial cds Length = 1474 Score = 42.1 bits (21), Expect = 2.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 196 cagaagctgagctcaagagga 216 ||||||||||||||||||||| Sbjct: 34 cagaagctgagctcaagagga 14
>gb|AC099670.2| Homo sapiens chromosome 1 clone RP11-84O12, complete sequence Length = 171226 Score = 42.1 bits (21), Expect = 2.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 196 cagaagctgagctcaagagga 216 ||||||||||||||||||||| Sbjct: 152064 cagaagctgagctcaagagga 152084
>ref|NM_022049.1| Homo sapiens G protein-coupled receptor 88 (GPR88), mRNA Length = 3517 Score = 42.1 bits (21), Expect = 2.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 196 cagaagctgagctcaagagga 216 ||||||||||||||||||||| Sbjct: 67 cagaagctgagctcaagagga 47
>gb|AC090453.4| Homo sapiens chromosome 8, clone RP11-380B11, complete sequence Length = 166452 Score = 42.1 bits (21), Expect = 2.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 583 tgacaggtctctgattctgta 603 ||||||||||||||||||||| Sbjct: 44644 tgacaggtctctgattctgta 44664
>dbj|AP006301.1| Homo sapiens genomic DNA, chromosome 8 clone:RP11-139F6, complete sequence Length = 163604 Score = 42.1 bits (21), Expect = 2.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 583 tgacaggtctctgattctgta 603 ||||||||||||||||||||| Sbjct: 54208 tgacaggtctctgattctgta 54188
>gb|AC092818.4| Homo sapiens chromosome 8, clone RP11-419C23, complete sequence Length = 175100 Score = 42.1 bits (21), Expect = 2.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 583 tgacaggtctctgattctgta 603 ||||||||||||||||||||| Sbjct: 162594 tgacaggtctctgattctgta 162614
>dbj|AP000073.1| Homo sapiens genomic DNA, chromosome 8p11.2, senescence gene region, section 9/19, complete sequence Length = 100000 Score = 42.1 bits (21), Expect = 2.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 583 tgacaggtctctgattctgta 603 ||||||||||||||||||||| Sbjct: 65960 tgacaggtctctgattctgta 65980
>dbj|AB042411.1| Homo sapiens strg gene for striatum-specific G potein-coupled receptor, complete cds Length = 9448 Score = 42.1 bits (21), Expect = 2.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 196 cagaagctgagctcaagagga 216 ||||||||||||||||||||| Sbjct: 5313 cagaagctgagctcaagagga 5293
>dbj|AB042410.1| Homo sapiens strg mRNA for striatum-specific G protein-coupled receptor, complete cds Length = 3517 Score = 42.1 bits (21), Expect = 2.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 196 cagaagctgagctcaagagga 216 ||||||||||||||||||||| Sbjct: 67 cagaagctgagctcaagagga 47 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,690,772 Number of Sequences: 3902068 Number of extensions: 5690772 Number of successful extensions: 114076 Number of sequences better than 10.0: 19 Number of HSP's better than 10.0 without gapping: 18 Number of HSP's successfully gapped in prelim test: 1 Number of HSP's that attempted gapping in prelim test: 113983 Number of HSP's gapped (non-prelim): 94 length of query: 746 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 723 effective length of database: 17,143,297,704 effective search space: 12394604239992 effective search space used: 12394604239992 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 21 (42.1 bits)
