ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbags26f11 |
|---|---|
| Clone Library Name | barley_pub |
>ASNS_ASPOF (P31752) Asparagine synthetase [glutamine-hydrolyzing] (EC 6.3.5.4)| (AS) Length = 589 Score = 180 bits (456), Expect = 2e-45 Identities = 90/126 (71%), Positives = 101/126 (80%), Gaps = 6/126 (4%) Frame = -3 Query: 499 KAHTESNVTDKMMSNAKFIYPHNTPTTKEAYCYRMIFERFFPQNSAILTVPGGPSVACST 320 KAH +VTD+MM NA IYPHNTPTTKEAY YRMIFERFFPQNSA TVPGGPS+ACST Sbjct: 465 KAHAAKHVTDRMMLNAARIYPHNTPTTKEAYYYRMIFERFFPQNSARFTVPGGPSIACST 524 Query: 319 AKAVEWDARWSGNLDPSGRAALGVHLSAYEQEHLPATIMAG------TSKKPRMIKVAAP 158 AKA+EWDARWS NLDPSGRAALGVH SAY+ LP++I AG T+KKPR++ VA P Sbjct: 525 AKAIEWDARWSNNLDPSGRAALGVHDSAYDPP-LPSSISAGKGAAMITNKKPRIVDVATP 583 Query: 157 GVAIES 140 GV I + Sbjct: 584 GVVIST 589
>ASNS1_PEA (P19251) Asparagine synthetase, nodule [glutamine-hydrolyzing] (EC| 6.3.5.4) (Glutamine-dependent asparagine synthetase) Length = 585 Score = 158 bits (400), Expect = 7e-39 Identities = 80/120 (66%), Positives = 89/120 (74%) Frame = -3 Query: 499 KAHTESNVTDKMMSNAKFIYPHNTPTTKEAYCYRMIFERFFPQNSAILTVPGGPSVACST 320 K H +VTD+MM NA I+P NTP TKEAY YRMIFERFFPQNSA LTVPGGPSVACST Sbjct: 466 KDHAAKHVTDRMMFNASHIFPFNTPNTKEAYYYRMIFERFFPQNSARLTVPGGPSVACST 525 Query: 319 AKAVEWDARWSGNLDPSGRAALGVHLSAYEQEHLPATIMAGTSKKPRMIKVAAPGVAIES 140 KA+EWDA WS NLDPSGRAALGVH+SAYE + P T K I V+ GVAI++ Sbjct: 526 EKAIEWDASWSNNLDPSGRAALGVHVSAYEHQINPVTKGVEPEKIIPKIGVSPLGVAIQT 585
>ASNS_ARATH (P49078) Asparagine synthetase [glutamine-hydrolyzing] (EC 6.3.5.4)| (Glutamine-dependent asparagine synthetase) Length = 583 Score = 158 bits (399), Expect = 9e-39 Identities = 80/122 (65%), Positives = 91/122 (74%), Gaps = 2/122 (1%) Frame = -3 Query: 499 KAHTESNVTDKMMSNAKFIYPHNTPTTKEAYCYRMIFERFFPQNSAILTVPGGPSVACST 320 K H NV DKMMSNA I+PHNTP TKEAY YRMIFERFFPQNSA LTVPGG +VACST Sbjct: 465 KDHAAQNVNDKMMSNAGHIFPHNTPNTKEAYYYRMIFERFFPQNSARLTVPGGATVACST 524 Query: 319 AKAVEWDARWSGNLDPSGRAALGVHLSAYEQEHLPATI--MAGTSKKPRMIKVAAPGVAI 146 AKAVEWDA WS N+DPSGRAA+GVHLSAY+ +++ TI + P M+ GV I Sbjct: 525 AKAVEWDASWSNNMDPSGRAAIGVHLSAYDGKNVALTIPPLKAIDNMPMMM---GQGVVI 581 Query: 145 ES 140 +S Sbjct: 582 QS 583
>ASNS_BRAOL (P49091) Asparagine synthetase [glutamine-hydrolyzing] (EC 6.3.5.4)| (Glutamine-dependent asparagine synthetase) Length = 585 Score = 156 bits (395), Expect = 3e-38 Identities = 73/90 (81%), Positives = 78/90 (86%) Frame = -3 Query: 499 KAHTESNVTDKMMSNAKFIYPHNTPTTKEAYCYRMIFERFFPQNSAILTVPGGPSVACST 320 KAH NV DKMMS A FI+PHNTP TKEAY YRMIFERFFPQNSA LTVPGG +VACST Sbjct: 466 KAHAAENVNDKMMSKAAFIFPHNTPLTKEAYYYRMIFERFFPQNSARLTVPGGATVACST 525 Query: 319 AKAVEWDARWSGNLDPSGRAALGVHLSAYE 230 AKAVEWDA WS N+DPSGRAA+GVHLSAY+ Sbjct: 526 AKAVEWDASWSNNMDPSGRAAIGVHLSAYD 555
>ASNS2_PEA (P19252) Asparagine synthetase, root [glutamine-hydrolyzing] (EC| 6.3.5.4) (Glutamine-dependent asparagine synthetase) Length = 582 Score = 156 bits (394), Expect = 3e-38 Identities = 75/93 (80%), Positives = 79/93 (84%) Frame = -3 Query: 499 KAHTESNVTDKMMSNAKFIYPHNTPTTKEAYCYRMIFERFFPQNSAILTVPGGPSVACST 320 KAH +VTDKMM NA I+PHNTP TKEAY YRMIFERFFPQNSA LTVPGGP+VACST Sbjct: 465 KAHAAKHVTDKMMLNAGNIFPHNTPNTKEAYYYRMIFERFFPQNSARLTVPGGPTVACST 524 Query: 319 AKAVEWDARWSGNLDPSGRAALGVHLSAYEQEH 221 AKAVEWDA WS NLDPSGRAALGVH SAYE + Sbjct: 525 AKAVEWDAAWSNNLDPSGRAALGVHDSAYENHN 557
>ASNS_TRIVS (O24661) Asparagine synthetase [glutamine-hydrolyzing] (EC 6.3.5.4)| (Glutamine-dependent asparagine synthetase) Length = 585 Score = 152 bits (385), Expect = 4e-37 Identities = 79/112 (70%), Positives = 84/112 (75%) Frame = -3 Query: 499 KAHTESNVTDKMMSNAKFIYPHNTPTTKEAYCYRMIFERFFPQNSAILTVPGGPSVACST 320 KAH E +VTDKMM NA I+PHNTPTTKE Y YRMIFERFFPQNSA LTVPGGPSVACST Sbjct: 465 KAHAEQHVTDKMMLNAGHIFPHNTPTTKEGYYYRMIFERFFPQNSAKLTVPGGPSVACST 524 Query: 319 AKAVEWDARWSGNLDPSGRAALGVHLSAYEQEHLPATIMAGTSKKPRMIKVA 164 A AV WDA WS NLDPSGRAA GVH AYE H+P G K +M V+ Sbjct: 525 ATAVAWDASWSKNLDPSGRAATGVHDLAYE-NHVP----IGNLKSKKMDSVS 571
>ASNS1_LOTJA (P49092) Asparagine synthetase [glutamine-hydrolyzing] 1 (EC| 6.3.5.4) (Glutamine-dependent asparagine synthetase 1) Length = 585 Score = 151 bits (381), Expect = 1e-36 Identities = 81/122 (66%), Positives = 91/122 (74%), Gaps = 2/122 (1%) Frame = -3 Query: 499 KAHTESNVTDKMMSNAKFIYPHNTPTTKEAYCYRMIFERFFPQNSAILTVPGGPSVACST 320 K H +VTDKM+ NA I+ HNTP TKEAY YRMIFERFFPQNSA LTVPGGP+VACST Sbjct: 465 KDHAAKHVTDKMILNAGNIFRHNTPLTKEAYYYRMIFERFFPQNSARLTVPGGPTVACST 524 Query: 319 AKAVEWDARWSGNLDPSGRAALGVHLSAYEQEHLPATIMAGTSKKPRMIKVAAP--GVAI 146 AKAVEWDA WS NLDPSGRAALGVHLSAY+ + I + ++I + AP GVAI Sbjct: 525 AKAVEWDAAWSNNLDPSGRAALGVHLSAYDDKQ-NNLINNKPVEFEKLIPMEAPSLGVAI 583 Query: 145 ES 140 S Sbjct: 584 HS 585
>ASNS2_LOTJA (P49093) Asparagine synthetase [glutamine-hydrolyzing] 2 (EC| 6.3.5.4) (Glutamine-dependent asparagine synthetase 2) Length = 585 Score = 148 bits (373), Expect = 9e-36 Identities = 79/123 (64%), Positives = 91/123 (73%), Gaps = 3/123 (2%) Frame = -3 Query: 499 KAHTESNVTDKMMSNAKFIYPHNTPTTKEAYCYRMIFERFFPQNSAILTVPGGPSVACST 320 K H +VTDKMM NA IYP NTP TKEAY YRMIFERFFPQNSA L+VPGG S+ACST Sbjct: 465 KDHAAKHVTDKMMLNASNIYPFNTPNTKEAYYYRMIFERFFPQNSARLSVPGGASIACST 524 Query: 319 AKAVEWDARWSGNLDPSGRAALGVHLSAYEQEHLPATIMAGTSKK---PRMIKVAAPGVA 149 KA+EWDA WS NLDPSGRAALGVH SAY+ + L ++ G + P+M +V+ GVA Sbjct: 525 EKAIEWDAAWSNNLDPSGRAALGVHDSAYD-DQLNKSVSKGVEPEKIIPKM-EVSPLGVA 582 Query: 148 IES 140 I S Sbjct: 583 ILS 585
>ASNS_ORYSA (Q43011) Asparagine synthetase [glutamine-hydrolyzing] (EC 6.3.5.4)| (Glutamine-dependent asparagine synthetase) Length = 590 Score = 146 bits (368), Expect = 3e-35 Identities = 68/90 (75%), Positives = 75/90 (83%) Frame = -3 Query: 499 KAHTESNVTDKMMSNAKFIYPHNTPTTKEAYCYRMIFERFFPQNSAILTVPGGPSVACST 320 K H +V+D MM NA F+YP NTP TKEAY YR IFE+FFP+N+A LTVPGGPSVACST Sbjct: 465 KDHANEHVSDSMMMNASFVYPENTPVTKEAYYYRTIFEKFFPKNAARLTVPGGPSVACST 524 Query: 319 AKAVEWDARWSGNLDPSGRAALGVHLSAYE 230 AKAVEWDA WS NLDPSGRAALGVH +AYE Sbjct: 525 AKAVEWDAAWSKNLDPSGRAALGVHDAAYE 554
>ASNS_MAIZE (P49094) Asparagine synthetase [glutamine-hydrolyzing] (EC 6.3.5.4)| (Glutamine-dependent asparagine synthetase) Length = 585 Score = 107 bits (267), Expect = 2e-23 Identities = 49/79 (62%), Positives = 60/79 (75%) Frame = -3 Query: 499 KAHTESNVTDKMMSNAKFIYPHNTPTTKEAYCYRMIFERFFPQNSAILTVPGGPSVACST 320 K+ TE VTD+MM+NA ++P+NTP KEAY YRMIFER FPQ+SA TVP GPS+ACST Sbjct: 465 KSFTEQQVTDEMMNNAAQMFPYNTPVNKEAYYYRMIFERLFPQDSARETVPWGPSIACST 524 Query: 319 AKAVEWDARWSGNLDPSGR 263 A+EW +W + DPSGR Sbjct: 525 PAAIEWVEQWKASNDPSGR 543
>ASNB_ECOLI (P22106) Asparagine synthetase B [glutamine-hydrolyzing] (EC| 6.3.5.4) Length = 553 Score = 102 bits (254), Expect = 6e-22 Identities = 50/83 (60%), Positives = 62/83 (74%) Frame = -3 Query: 478 VTDKMMSNAKFIYPHNTPTTKEAYCYRMIFERFFPQNSAILTVPGGPSVACSTAKAVEWD 299 V+D+ + A+F +P+NTPT+KEAY YR IFE FP SA VPGGPSVACS+AKA+EWD Sbjct: 472 VSDQQLETARFRFPYNTPTSKEAYLYREIFEELFPLPSAAECVPGGPSVACSSAKAIEWD 531 Query: 298 ARWSGNLDPSGRAALGVHLSAYE 230 + DPSGR A+GVH SAY+ Sbjct: 532 EAFKKMDDPSGR-AVGVHQSAYK 553
>ASNS_SANAU (O24338) Asparagine synthetase [glutamine-hydrolyzing] (EC 6.3.5.4)| (Glutamine-dependent asparagine synthetase) Length = 524 Score = 76.3 bits (186), Expect = 4e-14 Identities = 35/43 (81%), Positives = 37/43 (86%) Frame = -3 Query: 499 KAHTESNVTDKMMSNAKFIYPHNTPTTKEAYCYRMIFERFFPQ 371 KAH+ +VTDKMM NA IYPHNTPTTKEAY YRMIFERFFPQ Sbjct: 465 KAHSALHVTDKMMLNAAHIYPHNTPTTKEAYYYRMIFERFFPQ 507
>ASNS_MOUSE (Q61024) Asparagine synthetase [glutamine-hydrolyzing] (EC 6.3.5.4)| (Glutamine-dependent asparagine synthetase) Length = 560 Score = 52.0 bits (123), Expect = 9e-07 Identities = 30/77 (38%), Positives = 36/77 (46%) Frame = -3 Query: 493 HTESNVTDKMMSNAKFIYPHNTPTTKEAYCYRMIFERFFPQNSAILTVPGGPSVACSTAK 314 + E V D+MMS A +P NTP TKE Y YR IFER +P + LT Sbjct: 487 YVEHQVDDEMMSAASQKFPFNTPKTKEGYFYRQIFERHYPGRADWLT------------- 533 Query: 313 AVEWDARWSGNLDPSGR 263 W +W DPS R Sbjct: 534 -HYWMPKWINATDPSAR 549
>ASNS_CRIGR (P19891) Asparagine synthetase [glutamine-hydrolyzing] (EC 6.3.5.4)| (Glutamine-dependent asparagine synthetase) Length = 560 Score = 51.2 bits (121), Expect = 2e-06 Identities = 29/77 (37%), Positives = 36/77 (46%) Frame = -3 Query: 493 HTESNVTDKMMSNAKFIYPHNTPTTKEAYCYRMIFERFFPQNSAILTVPGGPSVACSTAK 314 + E V D+MM+ A +P NTP TKE Y YR IFER +P + LT Sbjct: 487 YVEHQVDDEMMATAAQKFPFNTPKTKEGYYYRQIFERHYPGRADWLT------------- 533 Query: 313 AVEWDARWSGNLDPSGR 263 W +W DPS R Sbjct: 534 -HYWMPKWINATDPSAR 549
>ASNS_PONPY (Q5R6W9) Asparagine synthetase [glutamine-hydrolyzing] (EC 6.3.5.4)| (Glutamine-dependent asparagine synthetase) Length = 560 Score = 50.8 bits (120), Expect = 2e-06 Identities = 28/77 (36%), Positives = 36/77 (46%) Frame = -3 Query: 493 HTESNVTDKMMSNAKFIYPHNTPTTKEAYCYRMIFERFFPQNSAILTVPGGPSVACSTAK 314 + E V D MM+NA +P NTP TKE Y YR +FER +P + L Sbjct: 487 YVEHQVDDAMMANAAQKFPFNTPKTKEGYYYRQVFERHYPGRADWL-------------- 532 Query: 313 AVEWDARWSGNLDPSGR 263 + W +W DPS R Sbjct: 533 SHYWMPKWINATDPSAR 549
>ASNS_HUMAN (P08243) Asparagine synthetase [glutamine-hydrolyzing] (EC 6.3.5.4)| (Glutamine-dependent asparagine synthetase) (Cell cycle control protein TS11) Length = 560 Score = 50.8 bits (120), Expect = 2e-06 Identities = 28/77 (36%), Positives = 36/77 (46%) Frame = -3 Query: 493 HTESNVTDKMMSNAKFIYPHNTPTTKEAYCYRMIFERFFPQNSAILTVPGGPSVACSTAK 314 + E V D MM+NA +P NTP TKE Y YR +FER +P + L Sbjct: 487 YVEHQVDDAMMANAAQKFPFNTPKTKEGYYYRQVFERHYPGRADWL-------------- 532 Query: 313 AVEWDARWSGNLDPSGR 263 + W +W DPS R Sbjct: 533 SHYWMPKWINATDPSAR 549
>ASNS_RAT (P49088) Asparagine synthetase [glutamine-hydrolyzing] (EC 6.3.5.4)| (Glutamine-dependent asparagine synthetase) Length = 560 Score = 49.3 bits (116), Expect = 6e-06 Identities = 29/75 (38%), Positives = 33/75 (44%) Frame = -3 Query: 487 ESNVTDKMMSNAKFIYPHNTPTTKEAYCYRMIFERFFPQNSAILTVPGGPSVACSTAKAV 308 E V D MMS A +P NTP TKE Y YR IFE +P + LT Sbjct: 489 EHQVDDAMMSEASQKFPFNTPQTKEGYYYRQIFEHHYPGRADWLT--------------H 534 Query: 307 EWDARWSGNLDPSGR 263 W +W DPS R Sbjct: 535 YWMPKWINATDPSAR 549
>ASNS_MESAU (P17714) Asparagine synthetase [glutamine-hydrolyzing] (EC 6.3.5.4)| (Glutamine-dependent asparagine synthetase) Length = 560 Score = 48.5 bits (114), Expect = 1e-05 Identities = 28/77 (36%), Positives = 34/77 (44%) Frame = -3 Query: 493 HTESNVTDKMMSNAKFIYPHNTPTTKEAYCYRMIFERFFPQNSAILTVPGGPSVACSTAK 314 + E V D MM+ A +P NTP TKE Y YR IFE +P + LT Sbjct: 487 YVEHQVDDAMMATAAQKFPFNTPKTKEGYFYRQIFEHHYPGRADWLT------------- 533 Query: 313 AVEWDARWSGNLDPSGR 263 W +W DPS R Sbjct: 534 -HYWMPKWINATDPSAR 549
>ASNS2_YEAST (P49090) Asparagine synthetase [glutamine-hydrolyzing] 2 (EC| 6.3.5.4) (Glutamine-dependent asparagine synthetase 2) Length = 571 Score = 47.8 bits (112), Expect = 2e-05 Identities = 30/79 (37%), Positives = 40/79 (50%), Gaps = 2/79 (2%) Frame = -3 Query: 487 ESNVTDKMMSNAKFIYPHNTPTTKEAYCYRMIFERFFPQNSAILTVPGGPSVACSTAKAV 308 E ++D M +N K + + PTTKEAY YR+ F+ +FPQ +A TV + Sbjct: 497 ERAISDAMFANPKADWGDDIPTTKEAYWYRLKFDAWFPQKTAADTV-------------M 543 Query: 307 EW--DARWSGNLDPSGRAA 257 W A W DPSGR A Sbjct: 544 RWIPKADWGCAEDPSGRYA 562
>ASNS_CHICK (Q5ZJU3) Asparagine synthetase [glutamine-hydrolyzing] (EC 6.3.5.4)| (Glutamine-dependent asparagine synthetase) Length = 560 Score = 45.1 bits (105), Expect = 1e-04 Identities = 26/77 (33%), Positives = 34/77 (44%) Frame = -3 Query: 493 HTESNVTDKMMSNAKFIYPHNTPTTKEAYCYRMIFERFFPQNSAILTVPGGPSVACSTAK 314 + + V D ++ A YP N P TKE+Y YR IFE+ +P S+ L Sbjct: 487 YIDQQVDDLLLEKAAEKYPFNPPRTKESYYYRQIFEKHYPGRSSWL-------------- 532 Query: 313 AVEWDARWSGNLDPSGR 263 W RW DPS R Sbjct: 533 PHYWMPRWVEATDPSAR 549
>ASNS1_YEAST (P49089) Asparagine synthetase [glutamine-hydrolyzing] 1 (EC| 6.3.5.4) (Glutamine-dependent asparagine synthetase 1) Length = 571 Score = 43.9 bits (102), Expect = 2e-04 Identities = 28/83 (33%), Positives = 41/83 (49%), Gaps = 2/83 (2%) Frame = -3 Query: 499 KAHTESNVTDKMMSNAKFIYPHNTPTTKEAYCYRMIFERFFPQNSAILTVPGGPSVACST 320 K E+ ++D+M ++ K + + PTTKEA+ YR+ F+ FPQ + TV Sbjct: 494 KDTAEAVISDEMFASPKAEWGSDIPTTKEAFWYRLKFDALFPQKTVADTV---------- 543 Query: 319 AKAVEW--DARWSGNLDPSGRAA 257 + W A W DPSGR A Sbjct: 544 ---MRWIPKADWGCAEDPSGRYA 563
>ASNS_SCHPO (P78753) Probable asparagine synthetase [glutamine-hydrolyzing] (EC| 6.3.5.4) (Glutamine-dependent asparagine synthetase) Length = 556 Score = 36.6 bits (83), Expect = 0.039 Identities = 23/64 (35%), Positives = 30/64 (46%) Frame = -3 Query: 427 PTTKEAYCYRMIFERFFPQNSAILTVPGGPSVACSTAKAVEWDARWSGNLDPSGRAALGV 248 PTTKEA+ YR +F+ FP+ A + P A W DPSGR G Sbjct: 504 PTTKEAFWYRKLFDEIFPRQCADTVMRWVPK------------AEWGCPEDPSGRYQAG- 550 Query: 247 HLSA 236 H++A Sbjct: 551 HVAA 554
>ZAN_MOUSE (O88799) Zonadhesin precursor| Length = 5376 Score = 33.1 bits (74), Expect = 0.43 Identities = 24/78 (30%), Positives = 34/78 (43%), Gaps = 6/78 (7%) Frame = -1 Query: 462 CQMRSSFTHTTPRLQKRPTVTG*YLRGSSPRT----RQS*QCQAGQASHAAR--RRQ*SG 301 C S+FT P Q + T + GSSP T R+ CQ+G H + R G Sbjct: 3060 CPANSNFTSCLPSCQPSCSNTDVHCEGSSPNTLSSCREGCVCQSGYVLHNDKCILRNQCG 3119 Query: 300 MLGGRGTWIPQGEQHLES 247 +G IP+G+ + S Sbjct: 3120 CKDAQGALIPEGKTWITS 3137
>SIX3_CHICK (O42406) Homeobox protein SIX3 (Sine oculis homeobox homolog 3)| (CSIX3) Length = 314 Score = 32.0 bits (71), Expect = 0.95 Identities = 29/94 (30%), Positives = 38/94 (40%), Gaps = 7/94 (7%) Frame = -2 Query: 440 PTQHPDYKRGLLLQDDI*EVLPPELGN-------PDSARRAKRRMQHGEGSRVGCSVVGE 282 P +P KR L + P ++GN D A AK R+QH + G + E Sbjct: 211 PYPNPSKKRELAQATGL---TPTQVGNWFKNRRQRDRAAAAKNRLQHQAIGQSGMRSLAE 267 Query: 281 PGSLRESSTWSPSLGL*AGASPSNHHGRNQQEAE 180 PG SS SPS ASP+ + AE Sbjct: 268 PGCPTHSSAESPS----TAASPTTSVSSLTERAE 297
>POLG_RHDVF (P27410) Genome polyprotein (p254) [Contains: p16; p23; Helicase| (2C-like protein) (P2C); 3A-like protein; Viral genome-linked protein (VPg); Thiol protease P3C (EC 3.4.22.-); RNA-directed RNA polymerase (EC 2.7.7.48); Capsid protein VP60, sub Length = 2344 Score = 30.4 bits (67), Expect = 2.8 Identities = 11/29 (37%), Positives = 15/29 (51%) Frame = +1 Query: 319 PCCMRRLARLALSGLPSSGGRTSQISSCN 405 PCC+R RLA P G+ + +CN Sbjct: 33 PCCIRATGRLAWPVFPGQNGKEGPLETCN 61
>POLG_RHDV3 (P27411) Genome polyprotein (p254) [Contains: p16; p23; Helicase| (2C-like protein) (P2C); 3A-like protein; Viral genome-linked protein (VPg); Thiol protease P3C (EC 3.4.22.-); RNA-directed RNA polymerase (EC 2.7.7.48); Capsid protein VP60, sub Length = 2344 Score = 30.4 bits (67), Expect = 2.8 Identities = 11/29 (37%), Positives = 15/29 (51%) Frame = +1 Query: 319 PCCMRRLARLALSGLPSSGGRTSQISSCN 405 PCC+R RLA P G+ + +CN Sbjct: 33 PCCIRATGRLAWPVFPGQNGKEGPLETCN 61
>FUT7_HUMAN (Q11130) Alpha-(1,3)-fucosyltransferase (EC 2.4.1.-) (Galactoside| 3-L-fucosyltransferase) (Fucosyltransferase 7) (FUCT-VII) (Selectin-ligand synthase) Length = 342 Score = 30.0 bits (66), Expect = 3.6 Identities = 23/59 (38%), Positives = 29/59 (49%), Gaps = 1/59 (1%) Frame = +1 Query: 184 ASCWFLP*WLLGDAPAHRPRDGLQVLLSLRDPGSPTTEHPTLLPSPCCMR-RLARLALS 357 A+ W L WLLG AP P Q +++ P T+ P LPS C R +AR LS Sbjct: 25 AALWLL--WLLGSAPRGTPAP--QPTITILVWHWPFTDQPPELPSDTCTRYGIARCHLS 79
>DNLJ_MYCLE (O33102) DNA ligase (EC 6.5.1.2) (Polydeoxyribonucleotide synthase| [NAD+]) Length = 694 Score = 29.6 bits (65), Expect = 4.7 Identities = 15/33 (45%), Positives = 18/33 (54%) Frame = +1 Query: 214 LGDAPAHRPRDGLQVLLSLRDPGSPTTEHPTLL 312 LG RP Q L+LRD G P +EH TL+ Sbjct: 238 LGHIEGFRPATQHQAYLALRDWGLPVSEHTTLV 270
>ISP5_SCHPO (P40901) Sexual differentiation process putative amino-acid| permease isp5 Length = 580 Score = 29.6 bits (65), Expect = 4.7 Identities = 26/84 (30%), Positives = 34/84 (40%), Gaps = 11/84 (13%) Frame = -2 Query: 467 DDVKCEVHLPTQHPDY-------KRGLLLQDDI*EVLPPELGNPDSARR---AKRRMQHG 318 +DVK + + Y +RG L Q LPPE G P +R A+ G Sbjct: 33 EDVKVDASYEKEEVGYGELEVVPERGNLFQRWYRSFLPPEDGKPQKLKRTLTARHIQMIG 92 Query: 317 EGSRVGCSV-VGEPGSLRESSTWS 249 G +G V VG +LRE S Sbjct: 93 IGGAIGTGVWVGSKNTLREGGAAS 116
>POLG_RHDVB (Q89273) Genome polyprotein (p254) [Contains: p16; p23; Helicase| (2C-like protein) (P2C); 3A-like protein; Viral genome-linked protein (VPg); Thiol protease P3C (EC 3.4.22.-); RNA-directed RNA polymerase (EC 2.7.7.48); Capsid protein VP60, sub Length = 2344 Score = 29.3 bits (64), Expect = 6.2 Identities = 10/29 (34%), Positives = 15/29 (51%) Frame = +1 Query: 319 PCCMRRLARLALSGLPSSGGRTSQISSCN 405 PCC+R +LA P G+ + +CN Sbjct: 33 PCCIRATGKLAWPVFPGQNGKEGPLKTCN 61
>TENS1_BOVIN (Q9GLM4) Tensin-1| Length = 1715 Score = 29.3 bits (64), Expect = 6.2 Identities = 19/58 (32%), Positives = 26/58 (44%) Frame = -2 Query: 374 PELGNPDSARRAKRRMQHGEGSRVGCSVVGEPGSLRESSTWSPSLGL*AGASPSNHHG 201 P L P S + R++ G+ + P S ++ SPSLG GA SN HG Sbjct: 1183 PSLAAPSSPSLSHRQVMGPLGTGFHGNTGSSPQSSAATTPGSPSLGRHPGAQVSNLHG 1240
>GLYA_GLUOX (Q5FNK4) Serine hydroxymethyltransferase (EC 2.1.2.1) (Serine| methylase) (SHMT) Length = 434 Score = 29.3 bits (64), Expect = 6.2 Identities = 17/54 (31%), Positives = 27/54 (50%), Gaps = 4/54 (7%) Frame = -3 Query: 313 AVEWDARWSGNLDPSGRAALGV----HLSAYEQEHLPATIMAGTSKKPRMIKVA 164 A + +W ++ RA G+ + A +EH P I+AG+S PR+I A Sbjct: 142 APNYSGKWFNSVQYGVRAEDGLIDYDQMEALAREHKPKIIVAGSSAYPRVIDFA 195
>PSD2_PEA (P81930) Defense-related peptide 2 (Defensin-2) (Antifungal protein| Psd2) Length = 47 Score = 29.3 bits (64), Expect = 6.2 Identities = 13/26 (50%), Positives = 16/26 (61%), Gaps = 2/26 (7%) Frame = +2 Query: 146 NCDTRCRNLDHPRLLAGSCHDG--CW 217 NC+ CRN +H LL+G C D CW Sbjct: 19 NCNKHCRNNEH--LLSGRCRDDFRCW 42
>10KD_VIGUN (P18646) 10 kDa protein precursor (Clone PSAS10)| Length = 75 Score = 29.3 bits (64), Expect = 6.2 Identities = 13/29 (44%), Positives = 18/29 (62%), Gaps = 2/29 (6%) Frame = +2 Query: 137 STLNCDTRCRNLDHPRLLAGSCHDG--CW 217 +T +CD C+N +H LL+G C D CW Sbjct: 44 TTGSCDDHCKNKEH--LLSGRCRDDVRCW 70
>LUXS_STRPY (P0C0C7) S-ribosylhomocysteine lyase (EC 4.4.1.21) (Autoinducer-2| production protein luxS) (AI-2 synthesis protein) Length = 160 Score = 28.9 bits (63), Expect = 8.1 Identities = 15/47 (31%), Positives = 27/47 (57%), Gaps = 3/47 (6%) Frame = -1 Query: 213 QPSWQEPARSRG*SRLRHLVSQL---RVDGVLSCLPFLIRNKMYLVL 82 QP+ Q + G + HL+++L R+DG++ C PF R +L++ Sbjct: 45 QPN-QNSIETAGLHTIEHLLAKLIRQRIDGMIDCSPFGCRTGFHLIM 90
>LUXS_STRP8 (P0A3P9) S-ribosylhomocysteine lyase (EC 4.4.1.21) (Autoinducer-2| production protein luxS) (AI-2 synthesis protein) Length = 160 Score = 28.9 bits (63), Expect = 8.1 Identities = 15/47 (31%), Positives = 27/47 (57%), Gaps = 3/47 (6%) Frame = -1 Query: 213 QPSWQEPARSRG*SRLRHLVSQL---RVDGVLSCLPFLIRNKMYLVL 82 QP+ Q + G + HL+++L R+DG++ C PF R +L++ Sbjct: 45 QPN-QNSIETAGLHTIEHLLAKLIRQRIDGMIDCSPFGCRTGFHLIM 90
>LUXS_STRP6 (Q5XAN3) S-ribosylhomocysteine lyase (EC 4.4.1.21) (Autoinducer-2| production protein luxS) (AI-2 synthesis protein) Length = 160 Score = 28.9 bits (63), Expect = 8.1 Identities = 15/47 (31%), Positives = 27/47 (57%), Gaps = 3/47 (6%) Frame = -1 Query: 213 QPSWQEPARSRG*SRLRHLVSQL---RVDGVLSCLPFLIRNKMYLVL 82 QP+ Q + G + HL+++L R+DG++ C PF R +L++ Sbjct: 45 QPN-QNSIETAGLHTIEHLLAKLIRQRIDGMIDCSPFGCRTGFHLIM 90
>LUXS_STRP3 (P0A3P8) S-ribosylhomocysteine lyase (EC 4.4.1.21) (Autoinducer-2| production protein luxS) (AI-2 synthesis protein) Length = 160 Score = 28.9 bits (63), Expect = 8.1 Identities = 15/47 (31%), Positives = 27/47 (57%), Gaps = 3/47 (6%) Frame = -1 Query: 213 QPSWQEPARSRG*SRLRHLVSQL---RVDGVLSCLPFLIRNKMYLVL 82 QP+ Q + G + HL+++L R+DG++ C PF R +L++ Sbjct: 45 QPN-QNSIETAGLHTIEHLLAKLIRQRIDGMIDCSPFGCRTGFHLIM 90
>LUXS_STRP1 (P0C0C8) S-ribosylhomocysteine lyase (EC 4.4.1.21) (Autoinducer-2| production protein luxS) (AI-2 synthesis protein) Length = 160 Score = 28.9 bits (63), Expect = 8.1 Identities = 15/47 (31%), Positives = 27/47 (57%), Gaps = 3/47 (6%) Frame = -1 Query: 213 QPSWQEPARSRG*SRLRHLVSQL---RVDGVLSCLPFLIRNKMYLVL 82 QP+ Q + G + HL+++L R+DG++ C PF R +L++ Sbjct: 45 QPN-QNSIETAGLHTIEHLLAKLIRQRIDGMIDCSPFGCRTGFHLIM 90
>FOXH1_XENLA (P70056) Forkhead box protein H1 (Forkhead activin signal| transducer 1) (Fast-1) (xFAST-1) Length = 518 Score = 28.9 bits (63), Expect = 8.1 Identities = 12/23 (52%), Positives = 12/23 (52%) Frame = -2 Query: 269 RESSTWSPSLGL*AGASPSNHHG 201 RE TWSP G G SP H G Sbjct: 62 REGGTWSPDRGSMYGLSPGTHEG 84
>FDHA_METJA (P61159) Formate dehydrogenase alpha chain (EC 1.2.1.2)| Length = 673 Score = 28.9 bits (63), Expect = 8.1 Identities = 11/25 (44%), Positives = 16/25 (64%) Frame = +2 Query: 356 QDCRVLGEEPLKYHPVTVGLFCSRG 430 +D RV+G P K HP+ G C++G Sbjct: 24 KDGRVIGIHPNKRHPINEGKLCAKG 48
>RNC_HUMAN (Q9NRR4) Ribonuclease III (EC 3.1.26.3) (RNase III) (Drosha) (p241)| Length = 1374 Score = 28.9 bits (63), Expect = 8.1 Identities = 19/70 (27%), Positives = 30/70 (42%), Gaps = 9/70 (12%) Frame = -2 Query: 353 SARRAKRRMQHGEGSRVGCSVVGEPGS---------LRESSTWSPSLGL*AGASPSNHHG 201 S R+ ++ G G SVV EP ++ + +W+P L + SPS Sbjct: 302 SLERSYKKEYKRSGRSYGLSVVPEPAGCTPELPGEIIKNTDSWAPPLEIVNHRSPSREKK 361 Query: 200 RNQQEAEDDQ 171 R + E E D+ Sbjct: 362 RARWEEEKDR 371
>ATP6_PYLLI (Q37601) ATP synthase a chain (EC 3.6.3.14) (ATPase protein 6)| Length = 248 Score = 28.9 bits (63), Expect = 8.1 Identities = 15/29 (51%), Positives = 19/29 (65%) Frame = +3 Query: 129 GHHQLSIATPGAATLIILGFLLVPAMMVA 215 G H LS+ PG T I+L FLLVP +V+ Sbjct: 137 GFHMLSLFLPG-GTSIVLAFLLVPIEIVS 164
>MURD_NITEU (Q82VS5) UDP-N-acetylmuramoylalanine--D-glutamate ligase (EC| 6.3.2.9) (UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase) (D-glutamic acid-adding enzyme) Length = 471 Score = 28.9 bits (63), Expect = 8.1 Identities = 17/76 (22%), Positives = 31/76 (40%), Gaps = 6/76 (7%) Frame = -3 Query: 427 PTTKEAYCYRMIFERFFPQNSAILTVPGG------PSVACSTAKAVEWDARWSGNLDPSG 266 P + + + +++ P + IL + G S+ K WD +GN+ P+ Sbjct: 93 PVIGDIELFAVALDQYAPPGTKILAITGSNGKTTVTSMVGEMVKNAGWDVEVAGNIGPAA 152 Query: 265 RAALGVHLSAYEQEHL 218 AL + A + HL Sbjct: 153 LDALMQRMDANKWPHL 168
>CXCC1_HUMAN (Q9P0U4) CpG-binding protein (PHD finger and CXXC domain-containing| protein 1) (CXXC finger protein 1) Length = 656 Score = 28.9 bits (63), Expect = 8.1 Identities = 28/86 (32%), Positives = 38/86 (44%), Gaps = 3/86 (3%) Frame = -2 Query: 362 NPDSARRAKRRMQHGEGSRVGCSVVGEPGSLRESSTWSPSLGL*AGASPSNHHGRNQQEA 183 +PD RRA G G+ VG + S +SS P + A+PS HH + QQ+ Sbjct: 115 DPDLQRRA------GSGTGVGAMLARGSASPHKSSP-QPLV-----ATPSQHHQQQQQQI 162 Query: 182 E-DDQGCGTW--CRN*ELMVSCPACR 114 + + CG CR E C CR Sbjct: 163 KRSARMCGECEACRRTEDCGHCDFCR 188
>D108B_PANTR (Q5IAA6) Beta-defensin 108B precursor (Defensin, beta 108B)| (Defensin, beta 108) (Beta-defensin 8) (DEFB-8) (BD-8) (cBD-8) (Fragment) Length = 53 Score = 28.9 bits (63), Expect = 8.1 Identities = 14/30 (46%), Positives = 19/30 (63%), Gaps = 1/30 (3%) Frame = +2 Query: 194 GSCHDGCWEMLLLIGREMDSK-CCSP*GIQ 280 GSC D C E + +GR ++S+ CC P G Q Sbjct: 13 GSCRDFCLETEIHVGRCLNSRPCCLPLGHQ 42 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 79,159,676 Number of Sequences: 219361 Number of extensions: 1832188 Number of successful extensions: 5650 Number of sequences better than 10.0: 46 Number of HSP's better than 10.0 without gapping: 5442 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5649 length of database: 80,573,946 effective HSP length: 104 effective length of database: 57,760,402 effective search space used: 3581144924 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
