ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags26e17
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AC156558.1| Mus musculus BAC clone RP24-531M24 from 12, compl... 48 0.025
2gb|AC160130.2| Mus musculus BAC clone RP23-254K13 from chromosom... 48 0.025
3ref|XM_634816.1| Dictyostelium discoideum hypothetical protein (... 44 0.40
4emb|CR954246.1| Pseudoalteromonas haloplanktis str. TAC125 chrom... 44 0.40
5dbj|AP000623.6| Homo sapiens genomic DNA, chromosome 11 clone:CM... 44 0.40
6gb|AC149418.2| Phakopsora pachyrhizi clone JGIAFNA-77J14, comple... 42 1.6
7gb|AC149401.2| Phakopsora pachyrhizi clone JGIAFNA-61H17, comple... 42 1.6
8gb|AC167117.5| Mus musculus chromosome 1, clone RP24-73D23, comp... 42 1.6
9gb|AC101852.7| Mus musculus chromosome 1, clone RP23-279P3, comp... 42 1.6
10gb|AC116695.12| Mus musculus chromosome 1, clone RP24-407C10, co... 42 1.6
11gb|AC009902.13| Homo sapiens chromosome 8, clone RP11-363E6, com... 42 1.6
12gb|AC126611.3| Mus musculus BAC clone RP23-316N22 from chromosom... 42 1.6
13gb|AC112269.3| Mus musculus BAC clone RP24-115O19 from 2, comple... 42 1.6
14gb|AC165052.2| Phakopsora pachyrhizi clone JGIAFNA-1197M20, comp... 42 1.6
15emb|CR848728.7| Zebrafish DNA sequence from clone CH211-251H16 i... 42 1.6
16emb|AL359257.9| Human DNA sequence from clone RP11-226E21 on chr... 42 1.6
17gb|AC158962.4| Mus musculus chromosome 1, clone RP23-443N21, com... 42 1.6
18gb|AC141480.4| Mus musculus BAC clone RP23-210I6 from chromosome... 42 1.6
19emb|BX469911.9| Zebrafish DNA sequence from clone DKEY-13K9 in l... 42 1.6
20gb|AC157667.11| Mus musculus 6 BAC RP24-86B22 (Roswell Park Canc... 42 1.6
21gb|AC093600.3| Homo sapiens BAC clone RP11-333E5 from 4, complet... 42 1.6
22dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.6
23gb|AY137757.1| Mus musculus vacuolar proton translocating ATPase... 42 1.6
24gb|AC011000.3|F16P17 Sequence of BAC F16P17 from Arabidopsis tha... 42 1.6
25dbj|AP003886.3| Oryza sativa (japonica cultivar-group) genomic D... 42 1.6
26dbj|AP004166.3| Oryza sativa (japonica cultivar-group) genomic D... 42 1.6
27gb|AC009999.2|T20M3 Sequence of BAC T20M3 from Arabidopsis thali... 42 1.6
28gb|AC149376.2| Phakopsora pachyrhizi clone JGIAFNA-5A2, complete... 42 1.6
29gb|AC122222.6| Mus musculus BAC clone RP23-128D11 from 7, comple... 42 1.6
30gb|AC113936.16| Mus musculus chromosome 10, clone RP23-9F21, com... 42 1.6
31emb|AL844144.10| Mouse DNA sequence from clone RP23-204D17 on ch... 42 1.6
32gb|AC134244.4| Mus musculus BAC clone RP24-218O13 from 14, compl... 42 1.6
33gb|AC132240.3| Mus musculus BAC clone RP24-411A22 from 3, comple... 42 1.6
34gb|AC149340.2| Phakopsora pachyrhizi clone JGIAFNA-25D18, comple... 42 1.6
35emb|BX004998.7| Mouse DNA sequence from clone RP23-402C17 on chr... 42 1.6
36gb|AC162442.19| Mus musculus chromosome 1, clone RP24-178O17, co... 42 1.6
37emb|AL845350.6| Mouse DNA sequence from clone RP23-322M5 on chro... 42 1.6
38gb|AC158537.2| Mus musculus BAC clone RP23-2H7 from chromosome 1... 40 6.2
39gb|AC158767.3| Mus musculus chromosome 1, clone RP24-128E5, comp... 40 6.2
40gb|AY368673.1| Triticum turgidum HMW-glutenin locus, complete se... 40 6.2
41gb|DQ112036.1| Perna viridis clone PV106 microsatellite sequences 40 6.2
42gb|AC154354.2| Mus musculus BAC clone RP23-203C5 from chromosome... 40 6.2
43gb|AC112968.11| Mus musculus chromosome 1, clone RP24-273P12, co... 40 6.2
44gb|AE016822.1| Leifsonia xyli subsp. xyli str. CTCB07, complete ... 40 6.2
45gb|AC149429.1| Populus trichocarpa clone Pop1-109D09, complete s... 40 6.2
46gb|AC133648.3| Mus musculus BAC clone RP23-291B1 from chromosome... 40 6.2
47emb|CR382335.12| Zebrafish DNA sequence from clone DKEY-56I16 in... 40 6.2
48gb|AC122258.4| Mus musculus BAC clone RP23-182F18 from 7, comple... 40 6.2
49gb|AC125208.2| Mus musculus BAC clone RP23-183I4 from 6, complet... 40 6.2
50ref|XM_648407.1| Entamoeba histolytica HM-1:IMSS hypothetical pr... 40 6.2
51gb|AC004160.1| Homo sapiens BAC clone GS1-164B5 from 7, complete... 40 6.2
52ref|XM_725981.1| Plasmodium yoelii yoelii str. 17XNL vacuolar me... 40 6.2
53ref|XM_671939.1| Plasmodium berghei strain ANKA hypothetical pro... 40 6.2
54gb|AY198133.1| Spiroplasma kunkelii strain CR2-3x partial genome... 40 6.2
55emb|BX293536.4| Human DNA sequence from clone RP11-472D17 on chr... 40 6.2
56emb|AL953874.2| Human DNA sequence from clone CTD-2267G17 on chr... 40 6.2
57emb|AL137127.7| Human DNA sequence from clone RP5-1126H10 on chr... 40 6.2
58emb|AL022726.1|HS625H18 Human DNA sequence from clone RP4-625H18... 40 6.2
59emb|AL929354.1|PFA929354 Plasmodium falciparum strain 3D7, chrom... 40 6.2
60emb|AL954167.4| Mouse DNA sequence from clone RP23-300M3 on chro... 40 6.2
61emb|CR407548.6| Zebrafish DNA sequence from clone DKEY-166N22 in... 40 6.2
62emb|BX323580.6| Zebrafish DNA sequence from clone DKEY-49J14 in ... 40 6.2
63dbj|AB100500.1| Selenomonas ruminantium regulator gene for degra... 40 6.2
64gb|AC116363.2| Homo sapiens chromosome 5 clone RP11-758E17, comp... 40 6.2
65gb|AC126778.9| Medicago truncatula clone mth2-32j21, complete se... 40 6.2
66gb|AC023755.14| Homo sapiens chromosome 12, clone RP11-44P17, co... 40 6.2
67gb|AC006135.3| Arabidopsis thaliana chromosome 2 clone F24H14 ma... 40 6.2
68ref|XM_931950.1| PREDICTED: Homo sapiens similar to XAGE-2 prote... 40 6.2
69gb|AC073589.6| Mus musculus strain C57BL/6J chromosome 12 clone ... 40 6.2
70gb|AC011257.9| Homo sapiens chromosome , clone RP11-26E5, comple... 40 6.2
71dbj|AK156521.1| Mus musculus activated spleen cDNA, RIKEN full-l... 40 6.2
72gb|AC159200.2| Mus musculus BAC clone RP23-366K13 from chromosom... 40 6.2
73emb|BX470131.7| Zebrafish DNA sequence from clone CH211-175M2 in... 40 6.2
74gb|AC010261.5| Homo sapiens chromosome 5 clone CTC-459M5, comple... 40 6.2
75emb|AL732370.10| Mouse DNA sequence from clone RP23-413I21 on ch... 40 6.2
76dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.2
77gb|AF250390.1|AF250390 Carsonella ruddii elongation factor Tu (t... 40 6.2
78gb|AC105755.4| Homo sapiens BAC clone RP11-46H14 from 4, complet... 40 6.2
79gb|AC012152.13| Homo sapiens 3 BAC CTC-552C10 (Cal Tech Human BA... 40 6.2
80gb|AC117075.2| Dictyostelium discoideum chromosome 2 map 5201047... 40 6.2
81gb|AC115606.2| Dictyostelium discoideum chromosome 2 map 159760-... 40 6.2
82gb|AC026714.5|AC026714 Homo sapiens chromosome 5 clone CTD-2132P... 40 6.2
83gb|AC084524.1|CBRG20K13 Caenorhabditis briggsae cosmid G20K13, c... 40 6.2
84gb|AC091983.3| Homo sapiens chromosome 5 clone RP11-559F22, comp... 40 6.2
85gb|AC175034.1| Mus musculus BAC clone RP23-204E23 from chromosom... 40 6.2
86dbj|AP004854.2| Oryza sativa (japonica cultivar-group) genomic D... 40 6.2
87dbj|AB009048.1| Arabidopsis thaliana genomic DNA, chromosome 5, ... 40 6.2
88emb|AL161712.5|CEY66D12A Caenorhabditis elegans YAC Y66D12A, com... 40 6.2
89emb|BX510957.15| Zebrafish DNA sequence from clone DKEY-69C1 in ... 40 6.2
90emb|BX001012.6| Zebrafish DNA sequence from clone CH211-11C20 in... 40 6.2
91emb|AL645786.5| Zebrafish DNA sequence from clone XX-B51 in link... 40 6.2
92emb|CR354425.7| Zebrafish DNA sequence from clone CH211-93N11 in... 40 6.2
93tpe|BN000872.1| TPA: TPA_exp: Mus musculus immunoglobulin heavy ... 40 6.2
94gb|AC117771.17| Mus musculus chromosome 1, clone RP24-512A5, com... 40 6.2
95emb|AJ318892.1|HSA318892 Homo sapiens partial XAGE-2 gene, exons... 40 6.2
96dbj|AB092729.1| Carabus reitterianus reitterianus ND5 gene for N... 40 6.2
97emb|AL929057.9| Zebrafish DNA sequence from clone CH211-147G21, ... 40 6.2
98emb|AL683897.5| Mouse DNA sequence from clone RP23-208E23 on chr... 40 6.2
99emb|AL611970.11| Mouse DNA sequence from clone RP23-413K17 on ch... 40 6.2 
>gb|AC156558.1| Mus musculus BAC clone RP24-531M24 from 12, complete sequence
          Length = 161831

 Score = 48.1 bits (24), Expect = 0.025
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                         
Query: 94    tacaaattaataggtttcataatgacat 121
             ||||||||||||||||||||| ||||||
Sbjct: 62813 tacaaattaataggtttcatactgacat 62840
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>gb|AC160130.2| Mus musculus BAC clone RP23-254K13 from chromosome 12, complete sequence
          Length = 177970

 Score = 48.1 bits (24), Expect = 0.025
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                          
Query: 94     tacaaattaataggtttcataatgacat 121
              ||||||||||||||||||||| ||||||
Sbjct: 176982 tacaaattaataggtttcatactgacat 177009
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>ref|XM_634816.1| Dictyostelium discoideum hypothetical protein (DDB0218648), partial
           mRNA
          Length = 1263

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 134 gtattatttttaaaaataattc 155
           ||||||||||||||||||||||
Sbjct: 589 gtattatttttaaaaataattc 610
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>emb|CR954246.1| Pseudoalteromonas haloplanktis str. TAC125 chromosome I, complete
              sequence
          Length = 3214944

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 123    catatcatagcgtattattttt 144
              ||||||||||||||||||||||
Sbjct: 367269 catatcatagcgtattattttt 367290
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>dbj|AP000623.6| Homo sapiens genomic DNA, chromosome 11 clone:CMB9-71P3, complete
             sequence
          Length = 121627

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 87    ggagaaatacaaattaataggt 108
             ||||||||||||||||||||||
Sbjct: 25107 ggagaaatacaaattaataggt 25086
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>gb|AC149418.2| Phakopsora pachyrhizi clone JGIAFNA-77J14, complete sequence
          Length = 43981

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 1     ctgaaattgaatagacaacat 21
             |||||||||||||||||||||
Sbjct: 34159 ctgaaattgaatagacaacat 34179
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>gb|AC149401.2| Phakopsora pachyrhizi clone JGIAFNA-61H17, complete sequence
          Length = 36209

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 1     ctgaaattgaatagacaacat 21
             |||||||||||||||||||||
Sbjct: 35988 ctgaaattgaatagacaacat 36008
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>gb|AC167117.5| Mus musculus chromosome 1, clone RP24-73D23, complete sequence
          Length = 166651

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                          
Query: 93    atacaaattaataggtttcataatgacat 121
             |||||||||||| |||||||| |||||||
Sbjct: 57229 atacaaattaattggtttcattatgacat 57257
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>gb|AC101852.7| Mus musculus chromosome 1, clone RP23-279P3, complete sequence
          Length = 185975

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                          
Query: 93    atacaaattaataggtttcataatgacat 121
             ||||||||||| ||||||||| |||||||
Sbjct: 26807 atacaaattaaaaggtttcattatgacat 26779
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>gb|AC116695.12| Mus musculus chromosome 1, clone RP24-407C10, complete sequence
          Length = 199978

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                           
Query: 93     atacaaattaataggtttcataatgacat 121
              |||||||||||| |||||||| |||||||
Sbjct: 165303 atacaaattaattggtttcattatgacat 165331
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>gb|AC009902.13| Homo sapiens chromosome 8, clone RP11-363E6, complete sequence
          Length = 217249

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 135    tattatttttaaaaataattcattc 159
              ||||||||||||||| |||||||||
Sbjct: 102575 tattatttttaaaaacaattcattc 102599
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>gb|AC126611.3| Mus musculus BAC clone RP23-316N22 from chromosome 14, complete
             sequence
          Length = 177469

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 136   attatttttaaaaataattca 156
             |||||||||||||||||||||
Sbjct: 19218 attatttttaaaaataattca 19238



 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 136   attatttttaaaaataattc 155
             ||||||||||||||||||||
Sbjct: 19235 attatttttaaaaataattc 19216
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>gb|AC112269.3| Mus musculus BAC clone RP24-115O19 from 2, complete sequence
          Length = 172714

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                           
Query: 93     atacaaattaataggtttcataatgacat 121
              ||||||| ||||||||||||| |||||||
Sbjct: 128635 atacaaagtaataggtttcattatgacat 128663
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>gb|AC165052.2| Phakopsora pachyrhizi clone JGIAFNA-1197M20, complete sequence
          Length = 38135

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 1     ctgaaattgaatagacaacat 21
             |||||||||||||||||||||
Sbjct: 36474 ctgaaattgaatagacaacat 36494
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>emb|CR848728.7| Zebrafish DNA sequence from clone CH211-251H16 in linkage group 2,
             complete sequence
          Length = 169884

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 138   tatttttaaaaataattcatt 158
             |||||||||||||||||||||
Sbjct: 44364 tatttttaaaaataattcatt 44344
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>emb|AL359257.9| Human DNA sequence from clone RP11-226E21 on chromosome 13 Contains
             part of a novel gene (KIAA0916)amd two novel genes,
             complete sequence
          Length = 97477

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 137   ttatttttaaaaataattcat 157
             |||||||||||||||||||||
Sbjct: 84083 ttatttttaaaaataattcat 84103
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>gb|AC158962.4| Mus musculus chromosome 1, clone RP23-443N21, complete sequence
          Length = 180337

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                           
Query: 93     atacaaattaataggtttcataatgacat 121
              ||||||||||| ||||||||| |||||||
Sbjct: 132986 atacaaattaaaaggtttcattatgacat 133014
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>gb|AC141480.4| Mus musculus BAC clone RP23-210I6 from chromosome 3, complete sequence
          Length = 209458

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                          
Query: 93    atacaaattaataggtttcataatgacat 121
             ||||||| ||||||||||||| |||||||
Sbjct: 19544 atacaaagtaataggtttcattatgacat 19572
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>emb|BX469911.9| Zebrafish DNA sequence from clone DKEY-13K9 in linkage group 5,
             complete sequence
          Length = 226730

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 134   gtattatttttaaaaataatt 154
             |||||||||||||||||||||
Sbjct: 83634 gtattatttttaaaaataatt 83654
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>gb|AC157667.11| Mus musculus 6 BAC RP24-86B22 (Roswell Park Cancer Institute (C57BL/6J
              Male) Mouse BAC Library) complete sequence
          Length = 206878

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                           
Query: 93     atacaaattaataggtttcataatgacat 121
              ||||||| ||||||||||||| |||||||
Sbjct: 106907 atacaaaataataggtttcattatgacat 106935
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>gb|AC093600.3| Homo sapiens BAC clone RP11-333E5 from 4, complete sequence
          Length = 165536

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 134   gtattatttttaaaaataatt 154
             |||||||||||||||||||||
Sbjct: 50335 gtattatttttaaaaataatt 50315
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
               sequence
          Length = 28434780

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 88      gagaaatacaaattaataggt 108
               |||||||||||||||||||||
Sbjct: 1501074 gagaaatacaaattaataggt 1501054
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>gb|AY137757.1| Mus musculus vacuolar proton translocating ATPase 100 kDa a4 subunit
             (a4) gene, partial cds; alternatively spliced
          Length = 32199

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                          
Query: 93    atacaaattaataggtttcataatgacat 121
             ||||||| ||||||||||||| |||||||
Sbjct: 12247 atacaaaataataggtttcattatgacat 12275
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>gb|AC011000.3|F16P17 Sequence of BAC F16P17 from Arabidopsis thaliana chromosome 1, complete
             sequence
          Length = 98412

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 167   aatatagtgtcctttccattt 187
             |||||||||||||||||||||
Sbjct: 15017 aatatagtgtcctttccattt 15037
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>dbj|AP003886.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OJ1163_G08
          Length = 150676

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 88    gagaaatacaaattaataggt 108
             |||||||||||||||||||||
Sbjct: 28562 gagaaatacaaattaataggt 28542
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>dbj|AP004166.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
              clone:OJ1499_A07
          Length = 132146

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 88     gagaaatacaaattaataggt 108
              |||||||||||||||||||||
Sbjct: 110979 gagaaatacaaattaataggt 110959
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>gb|AC009999.2|T20M3 Sequence of BAC T20M3 from Arabidopsis thaliana chromosome 1, complete
             sequence
          Length = 79554

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 136   attatttttaaaaataattca 156
             |||||||||||||||||||||
Sbjct: 24667 attatttttaaaaataattca 24647
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>gb|AC149376.2| Phakopsora pachyrhizi clone JGIAFNA-5A2, complete sequence
          Length = 39497

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 1    ctgaaattgaatagacaacat 21
            |||||||||||||||||||||
Sbjct: 3989 ctgaaattgaatagacaacat 3969
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>gb|AC122222.6| Mus musculus BAC clone RP23-128D11 from 7, complete sequence
          Length = 212225

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 93     atacaaattaataggtttcat 113
              |||||||||||||||||||||
Sbjct: 108077 atacaaattaataggtttcat 108057
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>gb|AC113936.16| Mus musculus chromosome 10, clone RP23-9F21, complete sequence
          Length = 205086

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                           
Query: 93     atacaaattaataggtttcataatgacat 121
              ||||||| ||||||||||||| |||||||
Sbjct: 172390 atacaaaataataggtttcattatgacat 172362
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>emb|AL844144.10| Mouse DNA sequence from clone RP23-204D17 on chromosome 2, complete
            sequence
          Length = 178965

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 134  gtattatttttaaaaataatt 154
            |||||||||||||||||||||
Sbjct: 8327 gtattatttttaaaaataatt 8307
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>gb|AC134244.4| Mus musculus BAC clone RP24-218O13 from 14, complete sequence
          Length = 220538

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 136    attatttttaaaaataattca 156
              |||||||||||||||||||||
Sbjct: 189993 attatttttaaaaataattca 190013



 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 136    attatttttaaaaataattc 155
              ||||||||||||||||||||
Sbjct: 190010 attatttttaaaaataattc 189991
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>gb|AC132240.3| Mus musculus BAC clone RP24-411A22 from 3, complete sequence
          Length = 182978

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 93   atacaaattaataggtttcataatgacat 121
            ||||||| ||||||||||||| |||||||
Sbjct: 3840 atacaaagtaataggtttcattatgacat 3812
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>gb|AC149340.2| Phakopsora pachyrhizi clone JGIAFNA-25D18, complete sequence
          Length = 34971

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 1   ctgaaattgaatagacaacat 21
           |||||||||||||||||||||
Sbjct: 313 ctgaaattgaatagacaacat 293
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>emb|BX004998.7| Mouse DNA sequence from clone RP23-402C17 on chromosome 4, complete
             sequence
          Length = 179875

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                          
Query: 93    atacaaattaataggtttcataatgacat 121
             ||||||| ||||||||||||| |||||||
Sbjct: 40165 atacaaaataataggtttcatcatgacat 40137
to top
>gb|AC162442.19| Mus musculus chromosome 1, clone RP24-178O17, complete sequence
          Length = 201383

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                           
Query: 93     atacaaattaataggtttcataatgacat 121
              |||||||||||| |||||||| |||||||
Sbjct: 200819 atacaaattaattggtttcattatgacat 200791
to top
>emb|AL845350.6| Mouse DNA sequence from clone RP23-322M5 on chromosome 2, complete
             sequence
          Length = 90631

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                          
Query: 93    atacaaattaataggtttcataatgacat 121
             ||||||| ||||||||||||| |||||||
Sbjct: 25405 atacaaagtaataggtttcattatgacat 25377
to top
>gb|AC158537.2| Mus musculus BAC clone RP23-2H7 from chromosome 14, complete sequence
          Length = 204554

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 135   tattatttttaaaaataatt 154
             ||||||||||||||||||||
Sbjct: 37260 tattatttttaaaaataatt 37241
to top
>gb|AC158767.3| Mus musculus chromosome 1, clone RP24-128E5, complete sequence
          Length = 188758

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 141    ttttaaaaataattcattct 160
              ||||||||||||||||||||
Sbjct: 172565 ttttaaaaataattcattct 172546
to top
>gb|AY368673.1| Triticum turgidum HMW-glutenin locus, complete sequence
          Length = 285506

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 134   gtattatttttaaaaataat 153
             ||||||||||||||||||||
Sbjct: 11560 gtattatttttaaaaataat 11579
to top
>gb|DQ112036.1| Perna viridis clone PV106 microsatellite sequences
          Length = 480

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 138 tatttttaaaaataattcat 157
           ||||||||||||||||||||
Sbjct: 167 tatttttaaaaataattcat 186
to top
>gb|AC154354.2| Mus musculus BAC clone RP23-203C5 from chromosome 14, complete sequence
          Length = 238278

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 135    tattatttttaaaaataatt 154
              ||||||||||||||||||||
Sbjct: 216152 tattatttttaaaaataatt 216133
to top
>gb|AC112968.11| Mus musculus chromosome 1, clone RP24-273P12, complete sequence
          Length = 181519

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 135    tattatttttaaaaataatt 154
              ||||||||||||||||||||
Sbjct: 117051 tattatttttaaaaataatt 117070
to top
>gb|AE016822.1| Leifsonia xyli subsp. xyli str. CTCB07, complete genome
          Length = 2584158

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 401     ggtactccgacgcgatgcgctgct 424
               ||||||||| ||||||||||||||
Sbjct: 2037434 ggtactccgccgcgatgcgctgct 2037457
to top
>gb|AC149429.1| Populus trichocarpa clone Pop1-109D09, complete sequence
          Length = 94633

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 135   tattatttttaaaaataattcatt 158
             |||| |||||||||||||||||||
Sbjct: 78285 tattttttttaaaaataattcatt 78308
to top
>gb|AC133648.3| Mus musculus BAC clone RP23-291B1 from chromosome 7, complete sequence
          Length = 207234

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 374   gttggaggcaatctgcatct 393
             ||||||||||||||||||||
Sbjct: 78413 gttggaggcaatctgcatct 78432
to top
>emb|CR382335.12| Zebrafish DNA sequence from clone DKEY-56I16 in linkage group 14,
             complete sequence
          Length = 159057

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 135   tattatttttaaaaataatt 154
             ||||||||||||||||||||
Sbjct: 30358 tattatttttaaaaataatt 30339
to top
>gb|AC122258.4| Mus musculus BAC clone RP23-182F18 from 7, complete sequence
          Length = 186441

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 139   atttttaaaaataattcatt 158
             ||||||||||||||||||||
Sbjct: 95488 atttttaaaaataattcatt 95469
to top
>gb|AC125208.2| Mus musculus BAC clone RP23-183I4 from 6, complete sequence
          Length = 218080

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 139    atttttaaaaataattcatt 158
              ||||||||||||||||||||
Sbjct: 137447 atttttaaaaataattcatt 137466
to top
>ref|XM_648407.1| Entamoeba histolytica HM-1:IMSS hypothetical protein (81.t00026)
           partial mRNA
          Length = 1209

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 139 atttttaaaaataattcatt 158
           ||||||||||||||||||||
Sbjct: 55  atttttaaaaataattcatt 74
to top
>gb|AC004160.1| Homo sapiens BAC clone GS1-164B5 from 7, complete sequence
          Length = 143751

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 137   ttatttttaaaaataattca 156
             ||||||||||||||||||||
Sbjct: 50037 ttatttttaaaaataattca 50056
to top
>ref|XM_725981.1| Plasmodium yoelii yoelii str. 17XNL vacuolar membrane protein Pep3
            (PY03107) partial mRNA
          Length = 4200

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 135  tattatttttaaaaataatt 154
            ||||||||||||||||||||
Sbjct: 3585 tattatttttaaaaataatt 3566
to top
>ref|XM_671939.1| Plasmodium berghei strain ANKA hypothetical protein (PB000939.03.0)
            partial mRNA
          Length = 2841

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 135  tattatttttaaaaataatt 154
            ||||||||||||||||||||
Sbjct: 2226 tattatttttaaaaataatt 2207
to top
>gb|AY198133.1| Spiroplasma kunkelii strain CR2-3x partial genome sequence
          Length = 84712

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 135   tattatttttaaaaataatt 154
             ||||||||||||||||||||
Sbjct: 41309 tattatttttaaaaataatt 41290
to top
>emb|BX293536.4| Human DNA sequence from clone RP11-472D17 on chromosome X Contains a
              pseudogene similar to part of GAGE family of proteins,
              three GAGE family member pseudogenes, the gene for antigen
              G family member D3, complete sequence
          Length = 121324

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 440    gtacattttttataaattcc 459
              ||||||||||||||||||||
Sbjct: 106264 gtacattttttataaattcc 106245
to top
>emb|AL953874.2| Human DNA sequence from clone CTD-2267G17 on chromosome X Contains the
             GAGED3 gene for family D G antigen 3, a GAGE family
             pseudogene and the 5' end of a pseudogene similar to part
             of family D G antigen 2 (GAGED2), complete sequence
          Length = 94514

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 440   gtacattttttataaattcc 459
             ||||||||||||||||||||
Sbjct: 49050 gtacattttttataaattcc 49069
to top
>emb|AL137127.7| Human DNA sequence from clone RP5-1126H10 on chromosome 1p34.3-35.3
             Contains the 3' end of the gene for
             retinoblastoma-associated factor 600 (RBAF600), complete
             sequence
          Length = 98832

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 139   atttttaaaaataattcatt 158
             ||||||||||||||||||||
Sbjct: 73753 atttttaaaaataattcatt 73772
to top
>emb|AL022726.1|HS625H18 Human DNA sequence from clone RP4-625H18 on chromosome 6p22.2-23 Contains
              the ID4 gene for dominant negative helix-loop-helix
              inhibitor of DNA binding 4 protein, a novel gene, the 5'
              end of two novel genes and four CpG islands, complete
              sequence
          Length = 185371

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 195    gtcctgctgaaaaaatccaaatttcatg 222
              ||||||| ||| ||||||||||||||||
Sbjct: 150912 gtcctgccgaagaaatccaaatttcatg 150885
to top
>emb|AL929354.1|PFA929354 Plasmodium falciparum strain 3D7, chromosome 5, segment 4/4
          Length = 340552

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 135    tattatttttaaaaataatt 154
              ||||||||||||||||||||
Sbjct: 307436 tattatttttaaaaataatt 307455
to top
>emb|AL954167.4| Mouse DNA sequence from clone RP23-300M3 on chromosome 11 Contains a zinc
              finger protein pseudogene, complete sequence
          Length = 190351

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 93     atacaaattaataggtttcataatgaca 120
              ||||||| ||||||||||||| ||||||
Sbjct: 153837 atacaaaataataggtttcattatgaca 153864
to top
>emb|CR407548.6| Zebrafish DNA sequence from clone DKEY-166N22 in linkage group 25,
             complete sequence
          Length = 136155

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 93    atacaaattaataggtttca 112
             ||||||||||||||||||||
Sbjct: 74786 atacaaattaataggtttca 74805
to top
>emb|BX323580.6| Zebrafish DNA sequence from clone DKEY-49J14 in linkage group 6,
             complete sequence
          Length = 98167

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 430   caattttcacgtacattttttata 453
             ||||||||||||| ||||||||||
Sbjct: 23352 caattttcacgtaaattttttata 23329
to top
>dbj|AB100500.1| Selenomonas ruminantium regulator gene for degradation of lysine
            decarboxylase and the flanking region, complete and
            partial cds
          Length = 8524

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 193  atgtcctgctgaaaaaatcc 212
            ||||||||||||||||||||
Sbjct: 5511 atgtcctgctgaaaaaatcc 5530
to top
>gb|AC116363.2| Homo sapiens chromosome 5 clone RP11-758E17, complete sequence
          Length = 194619

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 137    ttatttttaaaaataattca 156
              ||||||||||||||||||||
Sbjct: 189221 ttatttttaaaaataattca 189202
to top
>gb|AC126778.9| Medicago truncatula clone mth2-32j21, complete sequence
          Length = 110448

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 137  ttatttttaaaaataattcattct 160
            |||||||||||||||||| |||||
Sbjct: 7704 ttatttttaaaaataatttattct 7727
to top
>gb|AC023755.14| Homo sapiens chromosome 12, clone RP11-44P17, complete sequence
          Length = 135689

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 138    tatttttaaaaataattcat 157
              ||||||||||||||||||||
Sbjct: 109304 tatttttaaaaataattcat 109323
to top
>gb|AC006135.3| Arabidopsis thaliana chromosome 2 clone F24H14 map CIC06E08, complete
             sequence
          Length = 82356

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 135   tattatttttaaaaataatt 154
             ||||||||||||||||||||
Sbjct: 18282 tattatttttaaaaataatt 18263
to top
>ref|XM_931950.1| PREDICTED: Homo sapiens similar to XAGE-2 protein, transcript variant
            2 (LOC653216), mRNA
          Length = 1379

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 440  gtacattttttataaattcc 459
            ||||||||||||||||||||
Sbjct: 1283 gtacattttttataaattcc 1302
to top
>gb|AC073589.6| Mus musculus strain C57BL/6J chromosome 12 clone RP23-147E23, complete
              sequence
          Length = 222430

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 140    tttttaaaaataattcattc 159
              ||||||||||||||||||||
Sbjct: 101633 tttttaaaaataattcattc 101614
to top
>gb|AC011257.9| Homo sapiens chromosome , clone RP11-26E5, complete sequence
          Length = 184194

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 138    tatttttaaaaataattcat 157
              ||||||||||||||||||||
Sbjct: 163732 tatttttaaaaataattcat 163751
to top
>dbj|AK156521.1| Mus musculus activated spleen cDNA, RIKEN full-length enriched
            library, clone:F830028E14 product:unclassifiable, full
            insert sequence
          Length = 1547

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 139  atttttaaaaataattcatt 158
            ||||||||||||||||||||
Sbjct: 1388 atttttaaaaataattcatt 1407
to top
>gb|AC159200.2| Mus musculus BAC clone RP23-366K13 from chromosome 16, complete
             sequence
          Length = 143881

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 205   aaaaatccaaatttcatgtt 224
             ||||||||||||||||||||
Sbjct: 74167 aaaaatccaaatttcatgtt 74186
to top
>emb|BX470131.7| Zebrafish DNA sequence from clone CH211-175M2 in linkage group 10,
             complete sequence
          Length = 143803

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 137   ttatttttaaaaataattca 156
             ||||||||||||||||||||
Sbjct: 27675 ttatttttaaaaataattca 27656
to top
>gb|AC010261.5| Homo sapiens chromosome 5 clone CTC-459M5, complete sequence
          Length = 146017

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 135   tattatttttaaaaataatt 154
             ||||||||||||||||||||
Sbjct: 94848 tattatttttaaaaataatt 94867
to top
>emb|AL732370.10| Mouse DNA sequence from clone RP23-413I21 on chromosome X, complete
              sequence
          Length = 199391

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 139    atttttaaaaataattcatt 158
              ||||||||||||||||||||
Sbjct: 181296 atttttaaaaataattcatt 181277
to top
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 135      tattatttttaaaaataatt 154
                ||||||||||||||||||||
Sbjct: 13366340 tattatttttaaaaataatt 13366359
to top
>gb|AF250390.1|AF250390 Carsonella ruddii elongation factor Tu (tufA) gene, partial cds;
            ribosomal protein S10 (rps10), ribosomal protein L3
            (rpl3), ribosomal protein L4 (rpl4), ribosomal protein L2
            (rpl2), ribosomal protein S19 (rps19), and ribosomal
            protein L22 (rpl22) genes, complete cds; and ribosomal
            protein S3 (rps3) gene, partial cds
          Length = 3856

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 135  tattatttttaaaaataatt 154
            ||||||||||||||||||||
Sbjct: 2580 tattatttttaaaaataatt 2561
to top
>gb|AC105755.4| Homo sapiens BAC clone RP11-46H14 from 4, complete sequence
          Length = 145673

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 140   tttttaaaaataattcattc 159
             ||||||||||||||||||||
Sbjct: 35924 tttttaaaaataattcattc 35943
to top
>gb|AC012152.13| Homo sapiens 3 BAC CTC-552C10 (Cal Tech Human BAC Library C) complete
             sequence
          Length = 180194

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 137   ttatttttaaaaataattcattct 160
             |||||||||||||||||| |||||
Sbjct: 56143 ttatttttaaaaataatttattct 56120
to top
>gb|AC117075.2| Dictyostelium discoideum chromosome 2 map 5201047-5455781 strain AX4,
             complete sequence
          Length = 254733

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 135   tattatttttaaaaataatt 154
             ||||||||||||||||||||
Sbjct: 36942 tattatttttaaaaataatt 36961
to top
>gb|AC115606.2| Dictyostelium discoideum chromosome 2 map 159760-209066 strain AX4,
            complete sequence
          Length = 49306

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 136  attatttttaaaaataattc 155
            ||||||||||||||||||||
Sbjct: 1044 attatttttaaaaataattc 1063
to top
>gb|AC026714.5|AC026714 Homo sapiens chromosome 5 clone CTD-2132P24, complete sequence
          Length = 89153

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 137   ttatttttaaaaataattca 156
             ||||||||||||||||||||
Sbjct: 31071 ttatttttaaaaataattca 31052
to top
>gb|AC084524.1|CBRG20K13 Caenorhabditis briggsae cosmid G20K13, complete sequence
          Length = 35804

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 198   ctgctgaaaaaatccaaatt 217
             ||||||||||||||||||||
Sbjct: 16324 ctgctgaaaaaatccaaatt 16305
to top
>gb|AC091983.3| Homo sapiens chromosome 5 clone RP11-559F22, complete sequence
          Length = 110999

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 204   aaaaaatccaaatttcatgt 223
             ||||||||||||||||||||
Sbjct: 80837 aaaaaatccaaatttcatgt 80818
to top
>gb|AC175034.1| Mus musculus BAC clone RP23-204E23 from chromosome 7, complete sequence
          Length = 208487

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 139    atttttaaaaataattcatt 158
              ||||||||||||||||||||
Sbjct: 154408 atttttaaaaataattcatt 154427
to top
>dbj|AP004854.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1521_G01
          Length = 144102

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 135   tattatttttaaaaataatt 154
             ||||||||||||||||||||
Sbjct: 91591 tattatttttaaaaataatt 91610
to top
>dbj|AB009048.1| Arabidopsis thaliana genomic DNA, chromosome 5, TAC clone:K15E6
          Length = 71736

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 81    ttacaaggagaaatacaaat 100
             ||||||||||||||||||||
Sbjct: 49909 ttacaaggagaaatacaaat 49928
to top
>emb|AL161712.5|CEY66D12A Caenorhabditis elegans YAC Y66D12A, complete sequence
          Length = 123149

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 135   tattatttttaaaaataatt 154
             ||||||||||||||||||||
Sbjct: 13350 tattatttttaaaaataatt 13331
to top
>emb|BX510957.15| Zebrafish DNA sequence from clone DKEY-69C1 in linkage group 20, complete
              sequence
          Length = 149635

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 135    tattatttttaaaaataatt 154
              ||||||||||||||||||||
Sbjct: 114534 tattatttttaaaaataatt 114515
to top
>emb|BX001012.6| Zebrafish DNA sequence from clone CH211-11C20 in linkage group 4,
              complete sequence
          Length = 158481

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 135    tattatttttaaaaataatt 154
              ||||||||||||||||||||
Sbjct: 148939 tattatttttaaaaataatt 148920
to top
>emb|AL645786.5| Zebrafish DNA sequence from clone XX-B51 in linkage group 8 Contains
             eleven PIGR (polymeric immunoglobulin receptor)
             pseudogenes and three CpG islands, complete sequence
          Length = 88500

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 135   tattatttttaaaaataatt 154
             ||||||||||||||||||||
Sbjct: 39847 tattatttttaaaaataatt 39866
to top
>emb|CR354425.7| Zebrafish DNA sequence from clone CH211-93N11 in linkage group 25,
             complete sequence
          Length = 161571

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 93    atacaaattaataggtttca 112
             ||||||||||||||||||||
Sbjct: 85552 atacaaattaataggtttca 85571
to top
>tpe|BN000872.1| TPA: TPA_exp: Mus musculus immunoglobulin heavy chain variable region
               locus, strain C57BL/6
          Length = 2500000

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 140     tttttaaaaataattcattc 159
               ||||||||||||||||||||
Sbjct: 1883562 tttttaaaaataattcattc 1883543
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>gb|AC117771.17| Mus musculus chromosome 1, clone RP24-512A5, complete sequence
          Length = 161292

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 141   ttttaaaaataattcattct 160
             ||||||||||||||||||||
Sbjct: 25282 ttttaaaaataattcattct 25301
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>emb|AJ318892.1|HSA318892 Homo sapiens partial XAGE-2 gene, exons 3-5
          Length = 6013

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 440  gtacattttttataaattcc 459
            ||||||||||||||||||||
Sbjct: 5017 gtacattttttataaattcc 5036
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>dbj|AB092729.1| Carabus reitterianus reitterianus ND5 gene for NADH dehydrogenase
           subunit 5, pratial cds, isolate:U3-1
          Length = 1084

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 139 atttttaaaaataattcatt 158
           ||||||||||||||||||||
Sbjct: 956 atttttaaaaataattcatt 975
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>emb|AL929057.9| Zebrafish DNA sequence from clone CH211-147G21, complete sequence
          Length = 158344

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 134    gtattatttttaaaaataat 153
              ||||||||||||||||||||
Sbjct: 108911 gtattatttttaaaaataat 108892
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>emb|AL683897.5| Mouse DNA sequence from clone RP23-208E23 on chromosome 2, complete
              sequence
          Length = 187308

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 137    ttatttttaaaaataattcattct 160
              |||||||||||||||||| |||||
Sbjct: 132359 ttatttttaaaaataatttattct 132336
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>emb|AL611970.11| Mouse DNA sequence from clone RP23-413K17 on chromosome 4, complete
             sequence
          Length = 61588

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 140   tttttaaaaataattcattc 159
             ||||||||||||||||||||
Sbjct: 15962 tttttaaaaataattcattc 15981


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6,273,165
Number of Sequences: 3902068
Number of extensions: 6273165
Number of successful extensions: 176181
Number of sequences better than 10.0: 99
Number of HSP's better than 10.0 without gapping: 99
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 175633
Number of HSP's gapped (non-prelim): 548
length of query: 459
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 437
effective length of database: 17,147,199,772
effective search space: 7493326300364
effective search space used: 7493326300364
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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