ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags26e14
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK102908.1| Oryza sativa (japonica cultivar-group) cDNA clon... 198 1e-47
2dbj|AK058674.1| Oryza sativa (japonica cultivar-group) cDNA clon... 198 1e-47
3dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 111 2e-21
4dbj|AP004279.1| Oryza sativa (japonica cultivar-group) genomic D... 111 2e-21
5ref|NM_001031501.1| Gallus gallus elongation factor Tu GTP bindi... 78 3e-11
6emb|AJ851526.1| Gallus gallus mRNA for hypothetical protein, clo... 78 3e-11
7ref|XM_788372.1| PREDICTED: Strongylocentrotus purpuratus simila... 70 8e-09
8ref|XM_791493.1| PREDICTED: Strongylocentrotus purpuratus simila... 70 8e-09
9ref|NM_001030366.1| Xenopus tropicalis eftud2 protein (eftud2), ... 56 1e-04
10gb|BC090572.1| Xenopus tropicalis eftud2 protein, mRNA (cDNA clo... 56 1e-04
11gb|BC041724.1| Xenopus laevis U5 snRNP-specific protein, 116 kD,... 46 0.12
12gb|AE017344.1| Cryptococcus neoformans var. neoformans JEC21 chr... 44 0.46
13ref|XM_570208.1| Cryptococcus neoformans var. neoformans JEC21 1... 44 0.46
14gb|AY363103.1|AY363102S2 Mus musculus diadenosine triphosphate h... 44 0.46
15gb|AC159306.2| Mus musculus BAC clone RP23-206B2 from chromosome... 44 0.46
16gb|AC146775.8| Medicago truncatula clone mth2-95g14, complete se... 42 1.8
17gb|AC138131.16| Medicago truncatula clone mth2-21h11, complete s... 42 1.8
18emb|BX927275.8| Zebrafish DNA sequence from clone DKEY-108P14 in... 42 1.8
19gb|AC027238.5| Homo sapiens chromosome 8, clone RP11-377F20, com... 42 1.8
20gb|AC011626.8| Homo sapiens chromosome 8, clone RP11-369K17, com... 42 1.8
21gb|CP000116.1| Thiobacillus denitrificans ATCC 25259, complete g... 42 1.8
22gb|AC160061.6| Mus musculus 10 BAC RP24-496L10 (Roswell Park Can... 42 1.8
23gb|AC084644.1|CBRG45L10 Caenorhabditis briggsae cosmid G45L10, c... 42 1.8
24gb|AC084585.1|CBRG41C07 Caenorhabditis briggsae cosmid G41C07, c... 42 1.8
25emb|CR388224.11| Zebrafish DNA sequence from clone CH211-23L10 i... 42 1.8
26gb|AC102418.9| Mus musculus chromosome 3, clone RP24-499L10, com... 40 7.2
27ref|NM_004285.3| Homo sapiens hexose-6-phosphate dehydrogenase (... 40 7.2
28gb|AC159404.1| Trypanosoma brucei chromosome 8 clone RPCI93-10K1... 40 7.2
29gb|CP000071.1| Trypanosoma brucei chromosome 8, complete sequence 40 7.2
30ref|XM_361073.1| Magnaporthe grisea 70-15 hypothetical protein (... 40 7.2
31ref|XM_615112.2| PREDICTED: Bos taurus similar to GDH/6PGL endop... 40 7.2
32gb|AC146189.3| Pan troglodytes BAC clone CH251-490L21 from Y, co... 40 7.2
33gb|AC165425.2| Mus musculus BAC clone RP23-252G18 from chromosom... 40 7.2
34gb|AC146174.2| Pan troglodytes BAC clone CH251-549F12 from Y, co... 40 7.2
35ref|XM_570152.1| Cryptococcus neoformans var. neoformans JEC21 N... 40 7.2
36gb|AC126668.3| Mus musculus BAC clone RP24-370N20 from chromosom... 40 7.2
37gb|AC163445.3| Mus musculus chromosome 3, clone RP24-304A4, comp... 40 7.2
38emb|Z98044.13|HS510D11 Human DNA sequence from clone RP3-510D11 ... 40 7.2
39gb|U00096.2| Escherichia coli K-12 MG1655, complete genome 40 7.2
40emb|CR848038.1| Chlamydophila abortus strain S26/3, complete genome 40 7.2
41emb|CR548612.1| Paramecium tetraurelia macronuclear largest chro... 40 7.2
42gb|BC081559.1| Homo sapiens hexose-6-phosphate dehydrogenase (gl... 40 7.2
43emb|AJ012590.1|HSA012590 Homo sapiens mRNA for glucose 1-dehydro... 40 7.2
44emb|BX640500.10| Zebrafish DNA sequence from clone RP71-86I11 in... 40 7.2
45gb|L19201.1|ECOUW87 E. coli chromosomal region from 87.2 to 89.2... 40 7.2
46dbj|BS000556.1| Pan troglodytes chromosome Y clone:PTB-461C11, c... 40 7.2
47dbj|AP009048.1| Escherichia coli W3110 DNA, complete genome 40 7.2
48emb|X96421.1|HSCAMF3X1 H.sapiens Y chromosome cosmid cAMF3.1 con... 40 7.2
49gb|DQ397864.1| Cenarchaeum symbiosum clone C21B03, complete sequ... 40 7.2
50gb|DQ397850.1| Cenarchaeum symbiosum clone C09B07, complete sequ... 40 7.2
51gb|DQ397600.1| Cenarchaeum symbiosum clone C07B08, complete sequ... 40 7.2
52gb|DQ397551.1| Cenarchaeum symbiosum clone C05D09, complete sequ... 40 7.2
53emb|CR749282.1| Homo sapiens mRNA; cDNA DKFZp686A01246 (from clo... 40 7.2
54gb|DP000054.1| Pan troglodytes chromosome Y, partial sequence 40 7.2
55dbj|AP007174.1| Aspergillus oryzae RIB40 genomic DNA, SC103 40 7.2
56gb|AC016396.6| Homo sapiens chromosome 10 clone RP11-179B15, com... 40 7.2
57gb|AC012676.5| Homo sapiens chromosome 16 clone RP11-295D4, comp... 40 7.2
58gb|AC154713.2| Mus musculus BAC clone RP23-129G17 from chromosom... 40 7.2
59dbj|AK042307.1| Mus musculus 3 days neonate thymus cDNA, RIKEN f... 40 7.2
60gb|AC006040.3|AC006040 Homo sapiens BAC clone RP11-400O10 from Y... 40 7.2
61gb|AC011815.7|AC011815 Homo sapiens chromosome , clone RP11-158H... 40 7.2
62gb|AC154552.2| Mus musculus BAC clone RP23-414P13 from 13, compl... 40 7.2
63emb|BX322637.7| Zebrafish DNA sequence from clone DKEY-22A1 in l... 40 7.2
64gb|AC103618.6| Mus musculus chromosome 1, clone RP24-202B6, comp... 40 7.2
65emb|AL357615.7|HS373D10 Homo sapiens chromosome 9 BAC RP11-373D1... 40 7.2
66gb|AC140243.2| Mus musculus BAC clone RP23-470F3 from 9, complet... 40 7.2
67gb|AE005174.2| Escherichia coli O157:H7 EDL933, complete genome 40 7.2
68dbj|BA000007.2| Escherichia coli O157:H7 DNA, complete genome 40 7.2
69emb|AL672307.9| Mouse DNA sequence from clone RP23-141N2 on chro... 40 7.2
70emb|AL627134.9| Mouse DNA sequence from clone RP23-71I19 on chro... 40 7.2
71emb|AL391667.19| Human DNA sequence from clone RP11-214L15 on ch... 40 7.2
72dbj|AP003117.2| Homo sapiens genomic DNA, chromosome 8q23, clone... 40 7.2
73dbj|AP003111.1| Homo sapiens genomic DNA, chromosome 8q23, clone... 40 7.2 
>dbj|AK102908.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033113H11, full
            insert sequence
          Length = 3520

 Score =  198 bits (100), Expect = 1e-47
 Identities = 139/152 (91%)
 Strand = Plus / Minus

                                                                        
Query: 374  gcagtctgttgcgccagctcgttcatcatggcctcgtcaaagaacttgttgatgctaaca 433
            |||| ||| |||||||||||||||||||||||||| |||||||||||||||||||| |||
Sbjct: 3075 gcagcctgctgcgccagctcgttcatcatggcctcatcaaagaacttgttgatgctcaca 3016

                                                                        
Query: 434  tcctcgctcatgcccttccttcgcctggtcttcaccatgaactcacgggcaaggtgttgg 493
            ||||| |||||||||||||||||||| ||||||||||| |||||||| ||||| || || 
Sbjct: 3015 tcctcactcatgcccttccttcgcctagtcttcaccataaactcacgagcaagatgctgt 2956

                                            
Query: 494  atgggtgccggttccagaggccggaggacaat 525
            || ||||| |||||||||||||||||||||||
Sbjct: 2955 attggtgctggttccagaggccggaggacaat 2924
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>dbj|AK058674.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-018-H06, full
            insert sequence
          Length = 2055

 Score =  198 bits (100), Expect = 1e-47
 Identities = 139/152 (91%)
 Strand = Plus / Minus

                                                                        
Query: 374  gcagtctgttgcgccagctcgttcatcatggcctcgtcaaagaacttgttgatgctaaca 433
            |||| ||| |||||||||||||||||||||||||| |||||||||||||||||||| |||
Sbjct: 1648 gcagcctgctgcgccagctcgttcatcatggcctcatcaaagaacttgttgatgctcaca 1589

                                                                        
Query: 434  tcctcgctcatgcccttccttcgcctggtcttcaccatgaactcacgggcaaggtgttgg 493
            ||||| |||||||||||||||||||| ||||||||||| |||||||| ||||| || || 
Sbjct: 1588 tcctcactcatgcccttccttcgcctagtcttcaccataaactcacgagcaagatgctgt 1529

                                            
Query: 494  atgggtgccggttccagaggccggaggacaat 525
            || ||||| |||||||||||||||||||||||
Sbjct: 1528 attggtgctggttccagaggccggaggacaat 1497
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score =  111 bits (56), Expect = 2e-21
 Identities = 71/76 (93%)
 Strand = Plus / Plus

                                                                            
Query: 374      gcagtctgttgcgccagctcgttcatcatggcctcgtcaaagaacttgttgatgctaaca 433
                |||| ||| |||||||||||||||||||||||||| |||||||||||||||||||| |||
Sbjct: 23823452 gcagcctgctgcgccagctcgttcatcatggcctcatcaaagaacttgttgatgctcaca 23823511

                                
Query: 434      tcctcgctcatgccct 449
                ||||| ||||||||||
Sbjct: 23823512 tcctcactcatgccct 23823527



 Score = 93.7 bits (47), Expect = 6e-16
 Identities = 71/79 (89%)
 Strand = Plus / Plus

                                                                            
Query: 447      ccttccttcgcctggtcttcaccatgaactcacgggcaaggtgttggatgggtgccggtt 506
                ||||||||||||| ||||||||||| |||||||| ||||| || || || ||||| ||||
Sbjct: 23823615 ccttccttcgcctagtcttcaccataaactcacgagcaagatgctgtattggtgctggtt 23823674

                                   
Query: 507      ccagaggccggaggacaat 525
                |||||||||||||||||||
Sbjct: 23823675 ccagaggccggaggacaat 23823693
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>dbj|AP004279.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0556B08
          Length = 136775

 Score =  111 bits (56), Expect = 2e-21
 Identities = 71/76 (93%)
 Strand = Plus / Plus

                                                                         
Query: 374   gcagtctgttgcgccagctcgttcatcatggcctcgtcaaagaacttgttgatgctaaca 433
             |||| ||| |||||||||||||||||||||||||| |||||||||||||||||||| |||
Sbjct: 63117 gcagcctgctgcgccagctcgttcatcatggcctcatcaaagaacttgttgatgctcaca 63176

                             
Query: 434   tcctcgctcatgccct 449
             ||||| ||||||||||
Sbjct: 63177 tcctcactcatgccct 63192



 Score = 93.7 bits (47), Expect = 6e-16
 Identities = 71/79 (89%)
 Strand = Plus / Plus

                                                                         
Query: 447   ccttccttcgcctggtcttcaccatgaactcacgggcaaggtgttggatgggtgccggtt 506
             ||||||||||||| ||||||||||| |||||||| ||||| || || || ||||| ||||
Sbjct: 63280 ccttccttcgcctagtcttcaccataaactcacgagcaagatgctgtattggtgctggtt 63339

                                
Query: 507   ccagaggccggaggacaat 525
             |||||||||||||||||||
Sbjct: 63340 ccagaggccggaggacaat 63358
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>ref|NM_001031501.1| Gallus gallus elongation factor Tu GTP binding domain containing 2
            (EFTUD2), mRNA
          Length = 3457

 Score = 77.8 bits (39), Expect = 3e-11
 Identities = 63/71 (88%)
 Strand = Plus / Minus

                                                                        
Query: 407  tcgtcaaagaacttgttgatgctaacatcctcgctcatgcccttccttcgcctggtcttc 466
            ||||| ||||||||| ||||||| ||||||||||||| ||||||||| |||| |||||| 
Sbjct: 2903 tcgtcgaagaacttgctgatgctcacatcctcgctcaagcccttcctgcgccgggtcttg 2844

                       
Query: 467  accatgaactc 477
            | |||||||||
Sbjct: 2843 atcatgaactc 2833
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>emb|AJ851526.1| Gallus gallus mRNA for hypothetical protein, clone 4m11
          Length = 3457

 Score = 77.8 bits (39), Expect = 3e-11
 Identities = 63/71 (88%)
 Strand = Plus / Minus

                                                                        
Query: 407  tcgtcaaagaacttgttgatgctaacatcctcgctcatgcccttccttcgcctggtcttc 466
            ||||| ||||||||| ||||||| ||||||||||||| ||||||||| |||| |||||| 
Sbjct: 2903 tcgtcgaagaacttgctgatgctcacatcctcgctcaagcccttcctgcgccgggtcttg 2844

                       
Query: 467  accatgaactc 477
            | |||||||||
Sbjct: 2843 atcatgaactc 2833
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>ref|XM_788372.1| PREDICTED: Strongylocentrotus purpuratus similar to 116 kDa U5 small
            nuclear ribonucleoprotein component (U5 snRNP-specific
            protein, 116 kDa) (U5-116 kDa) (LOC588702), mRNA
          Length = 2076

 Score = 69.9 bits (35), Expect = 8e-09
 Identities = 35/35 (100%)
 Strand = Plus / Minus

                                               
Query: 407  tcgtcaaagaacttgttgatgctaacatcctcgct 441
            |||||||||||||||||||||||||||||||||||
Sbjct: 2021 tcgtcaaagaacttgttgatgctaacatcctcgct 1987
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>ref|XM_791493.1| PREDICTED: Strongylocentrotus purpuratus similar to 116 kDa U5
           small nuclear ribonucleoprotein component (U5
           snRNP-specific protein, 116 kDa) (U5-116 kDa)
           (LOC591948), mRNA
          Length = 1228

 Score = 69.9 bits (35), Expect = 8e-09
 Identities = 35/35 (100%)
 Strand = Plus / Minus

                                              
Query: 407 tcgtcaaagaacttgttgatgctaacatcctcgct 441
           |||||||||||||||||||||||||||||||||||
Sbjct: 920 tcgtcaaagaacttgttgatgctaacatcctcgct 886
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>ref|NM_001030366.1| Xenopus tropicalis eftud2 protein (eftud2), mRNA
          Length = 3366

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 52/60 (86%)
 Strand = Plus / Minus

                                                                        
Query: 431  acatcctcgctcatgcccttccttcgcctggtcttcaccatgaactcacgggcaaggtgt 490
            ||||||||||| | ||||||||| ||||| ||||| | ||||||||| | ||||||||||
Sbjct: 2908 acatcctcgcttaggcccttcctacgccttgtctttatcatgaactccctggcaaggtgt 2849
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>gb|BC090572.1| Xenopus tropicalis eftud2 protein, mRNA (cDNA clone MGC:69219
            IMAGE:5307638), complete cds
          Length = 3366

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 52/60 (86%)
 Strand = Plus / Minus

                                                                        
Query: 431  acatcctcgctcatgcccttccttcgcctggtcttcaccatgaactcacgggcaaggtgt 490
            ||||||||||| | ||||||||| ||||| ||||| | ||||||||| | ||||||||||
Sbjct: 2908 acatcctcgcttaggcccttcctacgccttgtctttatcatgaactccctggcaaggtgt 2849
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>gb|BC041724.1| Xenopus laevis U5 snRNP-specific protein, 116 kD, mRNA (cDNA clone
            MGC:52678 IMAGE:4682533), complete cds
          Length = 3330

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 50/59 (84%)
 Strand = Plus / Minus

                                                                       
Query: 431  acatcctcgctcatgcccttccttcgcctggtcttcaccatgaactcacgggcaaggtg 489
            |||||||||||||  |||||||| ||||| ||||| | ||| ||||| | |||||||||
Sbjct: 2904 acatcctcgctcagccccttcctacgccttgtctttatcataaactctctggcaaggtg 2846
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>gb|AE017344.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 4, complete
              sequence
          Length = 1783081

 Score = 44.1 bits (22), Expect = 0.46
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 446    cccttccttcgcctggtcttca 467
              ||||||||||||||||||||||
Sbjct: 581719 cccttccttcgcctggtcttca 581740



 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 248     gcaaattgcgtctccttgaa 267
               ||||||||||||||||||||
Sbjct: 1137447 gcaaattgcgtctccttgaa 1137466
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>ref|XM_570208.1| Cryptococcus neoformans var. neoformans JEC21 116 kda u5 small
            nuclear ribonucleoprotein component (CND02170) partial
            mRNA
          Length = 3150

 Score = 44.1 bits (22), Expect = 0.46
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 446  cccttccttcgcctggtcttca 467
            ||||||||||||||||||||||
Sbjct: 3000 cccttccttcgcctggtcttca 2979
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>gb|AY363103.1|AY363102S2 Mus musculus diadenosine triphosphate hydrolase (Fhit) gene, exons 6
              through 10 and partial cds
          Length = 688489

 Score = 44.1 bits (22), Expect = 0.46
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                        
Query: 44     aagaaaaaatcaaacaagaaaaggta 69
              |||||||||||||| |||||||||||
Sbjct: 570324 aagaaaaaatcaaagaagaaaaggta 570299
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>gb|AC159306.2| Mus musculus BAC clone RP23-206B2 from chromosome 14, complete sequence
          Length = 194660

 Score = 44.1 bits (22), Expect = 0.46
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 44    aagaaaaaatcaaacaagaaaaggta 69
             |||||||||||||| |||||||||||
Sbjct: 73177 aagaaaaaatcaaagaagaaaaggta 73152
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>gb|AC146775.8| Medicago truncatula clone mth2-95g14, complete sequence
          Length = 139593

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 41     gtaaagaaaaaatcaaacaagaaaa 65
              ||||||||| |||||||||||||||
Sbjct: 126721 gtaaagaaagaatcaaacaagaaaa 126697
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>gb|AC138131.16| Medicago truncatula clone mth2-21h11, complete sequence
          Length = 127696

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 51/61 (83%)
 Strand = Plus / Plus

                                                                         
Query: 447   ccttccttcgcctggtcttcaccatgaactcacgggcaaggtgttggatgggtgccggtt 506
             ||||||| ||||| || || ||||| || ||||||||||| || ||||| ||||| ||||
Sbjct: 78078 ccttcctacgccttgtttttaccataaattcacgggcaagatgctggattggtgcaggtt 78137

              
Query: 507   c 507
             |
Sbjct: 78138 c 78138
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>emb|BX927275.8| Zebrafish DNA sequence from clone DKEY-108P14 in linkage group 23,
            complete sequence
          Length = 133912

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 32   ttgtagtatgtaaagaaaaaa 52
            |||||||||||||||||||||
Sbjct: 2487 ttgtagtatgtaaagaaaaaa 2467
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>gb|AC027238.5| Homo sapiens chromosome 8, clone RP11-377F20, complete sequence
          Length = 193250

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 344    tcatcaaactacatcatcaag 364
              |||||||||||||||||||||
Sbjct: 154322 tcatcaaactacatcatcaag 154342
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>gb|AC011626.8| Homo sapiens chromosome 8, clone RP11-369K17, complete sequence
          Length = 184547

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 344   tcatcaaactacatcatcaag 364
             |||||||||||||||||||||
Sbjct: 30911 tcatcaaactacatcatcaag 30931
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>gb|CP000116.1| Thiobacillus denitrificans ATCC 25259, complete genome
          Length = 2909809

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 391     ctcgttcatcatggcctcgtc 411
               |||||||||||||||||||||
Sbjct: 2448609 ctcgttcatcatggcctcgtc 2448589
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>gb|AC160061.6| Mus musculus 10 BAC RP24-496L10 (Roswell Park Cancer Institute
             (C57BL/6J Male) Mouse BAC Library) complete sequence
          Length = 174662

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 171   gatggtacatacatgactaca 191
             |||||||||||||||||||||
Sbjct: 41552 gatggtacatacatgactaca 41532
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>gb|AC084644.1|CBRG45L10 Caenorhabditis briggsae cosmid G45L10, complete sequence
          Length = 46749

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 43   aaagaaaaaatcaaacaagaa 63
            |||||||||||||||||||||
Sbjct: 5231 aaagaaaaaatcaaacaagaa 5251
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>gb|AC084585.1|CBRG41C07 Caenorhabditis briggsae cosmid G41C07, complete sequence
          Length = 35417

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 43   aaagaaaaaatcaaacaagaa 63
            |||||||||||||||||||||
Sbjct: 1419 aaagaaaaaatcaaacaagaa 1439
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>emb|CR388224.11| Zebrafish DNA sequence from clone CH211-23L10 in linkage group 3,
             complete sequence
          Length = 130988

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 33/37 (89%)
 Strand = Plus / Minus

                                                  
Query: 413   aagaacttgttgatgctaacatcctcgctcatgccct 449
             ||||||||| |||| || ||||||||||||| |||||
Sbjct: 96215 aagaacttgctgatactgacatcctcgctcaagccct 96179
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>gb|AC102418.9| Mus musculus chromosome 3, clone RP24-499L10, complete sequence
          Length = 208274

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 43     aaagaaaaaatcaaacaagaaaag 66
              ||||||||||||||| ||||||||
Sbjct: 170995 aaagaaaaaatcaaaaaagaaaag 170972
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>ref|NM_004285.3| Homo sapiens hexose-6-phosphate dehydrogenase (glucose
           1-dehydrogenase) (H6PD), mRNA
          Length = 9117

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 497 ggtgccggttccagaggccg 516
           ||||||||||||||||||||
Sbjct: 970 ggtgccggttccagaggccg 951
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>gb|AC159404.1| Trypanosoma brucei chromosome 8 clone RPCI93-10K10, complete sequence
          Length = 182660

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 53    tcaaacaagaaaaggtatcatcat 76
             ||||| ||||||||||||||||||
Sbjct: 55491 tcaaaaaagaaaaggtatcatcat 55468
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>gb|CP000071.1| Trypanosoma brucei chromosome 8, complete sequence
          Length = 2481190

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 53      tcaaacaagaaaaggtatcatcat 76
               ||||| ||||||||||||||||||
Sbjct: 2102694 tcaaaaaagaaaaggtatcatcat 2102717
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>ref|XM_361073.1| Magnaporthe grisea 70-15 hypothetical protein (MG03616.4) partial
            mRNA
          Length = 2382

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                            
Query: 434  tcctcgctcatgcccttccttcgcctggtctt 465
            ||||||||||  |||||||| |||||||||||
Sbjct: 2303 tcctcgctcagccccttcctgcgcctggtctt 2272
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>ref|XM_615112.2| PREDICTED: Bos taurus similar to GDH/6PGL endoplasmic bifunctional
           protein precursor (LOC541220), mRNA
          Length = 2577

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 497 ggtgccggttccagaggccg 516
           ||||||||||||||||||||
Sbjct: 895 ggtgccggttccagaggccg 876
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>gb|AC146189.3| Pan troglodytes BAC clone CH251-490L21 from Y, complete sequence
          Length = 180597

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 299   atgttcccagtgcaaaagga 318
             ||||||||||||||||||||
Sbjct: 43056 atgttcccagtgcaaaagga 43037
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>gb|AC165425.2| Mus musculus BAC clone RP23-252G18 from chromosome 9, complete sequence
          Length = 217329

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 47     aaaaaatcaaacaagaaaag 66
              ||||||||||||||||||||
Sbjct: 117015 aaaaaatcaaacaagaaaag 116996
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>gb|AC146174.2| Pan troglodytes BAC clone CH251-549F12 from Y, complete sequence
          Length = 191823

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 299    atgttcccagtgcaaaagga 318
              ||||||||||||||||||||
Sbjct: 180318 atgttcccagtgcaaaagga 180299
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>ref|XM_570152.1| Cryptococcus neoformans var. neoformans JEC21 NADH-ubiquinone
            oxidoreductase 51 kDa subunit (CND04070) partial mRNA
          Length = 1657

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 248  gcaaattgcgtctccttgaa 267
            ||||||||||||||||||||
Sbjct: 1587 gcaaattgcgtctccttgaa 1606
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>gb|AC126668.3| Mus musculus BAC clone RP24-370N20 from chromosome 7, complete sequence
          Length = 179246

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 287   catggaagtgatatgttcccagtg 310
             ||||| ||||||||||||||||||
Sbjct: 37435 catggcagtgatatgttcccagtg 37412
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>gb|AC163445.3| Mus musculus chromosome 3, clone RP24-304A4, complete sequence
          Length = 175181

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 43    aaagaaaaaatcaaacaagaaaag 66
             ||||||||||||||| ||||||||
Sbjct: 13294 aaagaaaaaatcaaaaaagaaaag 13271
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>emb|Z98044.13|HS510D11 Human DNA sequence from clone RP3-510D11 on chromosome 1p36.2-36.3
             Contains two novel genes, the H6PD gene for
             hexose-6-phosphate dehydrogenase (glucose 1-dehydrogenase)
             (FLJ22807) and two CpG islands, complete sequence
          Length = 129149

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 497   ggtgccggttccagaggccg 516
             ||||||||||||||||||||
Sbjct: 34590 ggtgccggttccagaggccg 34609
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>gb|U00096.2| Escherichia coli K-12 MG1655, complete genome
          Length = 4639675

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 375     cagtctgttgcgccagctcg 394
               ||||||||||||||||||||
Sbjct: 4087797 cagtctgttgcgccagctcg 4087816
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>emb|CR848038.1| Chlamydophila abortus strain S26/3, complete genome
          Length = 1144377

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 45     agaaaaaatcaaacaagaaa 64
              ||||||||||||||||||||
Sbjct: 500902 agaaaaaatcaaacaagaaa 500883
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>emb|CR548612.1| Paramecium tetraurelia macronuclear largest chromosome, complete sequence
          Length = 984602

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 47     aaaaaatcaaacaagaaaag 66
              ||||||||||||||||||||
Sbjct: 353766 aaaaaatcaaacaagaaaag 353747
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>gb|BC081559.1| Homo sapiens hexose-6-phosphate dehydrogenase (glucose
            1-dehydrogenase), mRNA (cDNA clone MGC:87643
            IMAGE:5266232), complete cds
          Length = 4300

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 497  ggtgccggttccagaggccg 516
            ||||||||||||||||||||
Sbjct: 1000 ggtgccggttccagaggccg 981
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>emb|AJ012590.1|HSA012590 Homo sapiens mRNA for glucose 1-dehydrogenase
          Length = 2853

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 497 ggtgccggttccagaggccg 516
           ||||||||||||||||||||
Sbjct: 969 ggtgccggttccagaggccg 950
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>emb|BX640500.10| Zebrafish DNA sequence from clone RP71-86I11 in linkage group 9,
             complete sequence
          Length = 120013

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 43    aaagaaaaaatcaaacaaga 62
             ||||||||||||||||||||
Sbjct: 46615 aaagaaaaaatcaaacaaga 46634
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>gb|L19201.1|ECOUW87 E. coli chromosomal region from 87.2 to 89.2 minutes
          Length = 96484

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 375   cagtctgttgcgccagctcg 394
             ||||||||||||||||||||
Sbjct: 51414 cagtctgttgcgccagctcg 51433
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>dbj|BS000556.1| Pan troglodytes chromosome Y clone:PTB-461C11, complete sequences
          Length = 148964

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 299   atgttcccagtgcaaaagga 318
             ||||||||||||||||||||
Sbjct: 69289 atgttcccagtgcaaaagga 69308
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>dbj|AP009048.1| Escherichia coli W3110 DNA, complete genome
          Length = 4646332

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 375     cagtctgttgcgccagctcg 394
               ||||||||||||||||||||
Sbjct: 3546907 cagtctgttgcgccagctcg 3546888
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>emb|X96421.1|HSCAMF3X1 H.sapiens Y chromosome cosmid cAMF3.1 containing Yp pseudoautosomal
             boundary, PAB1
          Length = 41154

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 299   atgttcccagtgcaaaagga 318
             ||||||||||||||||||||
Sbjct: 14932 atgttcccagtgcaaaagga 14913
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>gb|DQ397864.1| Cenarchaeum symbiosum clone C21B03, complete sequence
          Length = 40572

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 403  ggcctcgtcaaagaacttgt 422
            ||||||||||||||||||||
Sbjct: 5951 ggcctcgtcaaagaacttgt 5932
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>gb|DQ397850.1| Cenarchaeum symbiosum clone C09B07, complete sequence
          Length = 40824

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 403 ggcctcgtcaaagaacttgt 422
           ||||||||||||||||||||
Sbjct: 667 ggcctcgtcaaagaacttgt 686
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>gb|DQ397600.1| Cenarchaeum symbiosum clone C07B08, complete sequence
          Length = 41295

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 403   ggcctcgtcaaagaacttgt 422
             ||||||||||||||||||||
Sbjct: 26336 ggcctcgtcaaagaacttgt 26317
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>gb|DQ397551.1| Cenarchaeum symbiosum clone C05D09, complete sequence
          Length = 43893

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 403  ggcctcgtcaaagaacttgt 422
            ||||||||||||||||||||
Sbjct: 4097 ggcctcgtcaaagaacttgt 4078
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>emb|CR749282.1| Homo sapiens mRNA; cDNA DKFZp686A01246 (from clone DKFZp686A01246)
          Length = 5602

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 497 ggtgccggttccagaggccg 516
           ||||||||||||||||||||
Sbjct: 882 ggtgccggttccagaggccg 863
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>gb|DP000054.1| Pan troglodytes chromosome Y, partial sequence
          Length = 23952694

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 299      atgttcccagtgcaaaagga 318
                ||||||||||||||||||||
Sbjct: 23815153 atgttcccagtgcaaaagga 23815134
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>dbj|AP007174.1| Aspergillus oryzae RIB40 genomic DNA, SC103
          Length = 1282697

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 419   ttgttgatgctaacatcctc 438
             ||||||||||||||||||||
Sbjct: 95400 ttgttgatgctaacatcctc 95419
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>gb|AC016396.6| Homo sapiens chromosome 10 clone RP11-179B15, complete sequence
          Length = 151766

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 43    aaagaaaaaatcaaacaagaaaag 66
             |||||||||||||||| |||||||
Sbjct: 39255 aaagaaaaaatcaaactagaaaag 39278
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>gb|AC012676.5| Homo sapiens chromosome 16 clone RP11-295D4, complete sequence
          Length = 172071

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 43     aaagaaaaaatcaaacaagaaaag 66
              |||||||||| |||||||||||||
Sbjct: 115243 aaagaaaaaaacaaacaagaaaag 115220
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>gb|AC154713.2| Mus musculus BAC clone RP23-129G17 from chromosome 13, complete
             sequence
          Length = 197815

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 46    gaaaaaatcaaacaagaaaaggta 69
             |||||||| |||||||||||||||
Sbjct: 11808 gaaaaaatgaaacaagaaaaggta 11785
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>dbj|AK042307.1| Mus musculus 3 days neonate thymus cDNA, RIKEN full-length enriched
            library, clone:A630080N16 product:leucine zipper
            transcription factor-like 1, full insert sequence
          Length = 1922

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 47   aaaaaatcaaacaagaaaag 66
            ||||||||||||||||||||
Sbjct: 1807 aaaaaatcaaacaagaaaag 1788
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>gb|AC006040.3|AC006040 Homo sapiens BAC clone RP11-400O10 from Y, complete sequence
          Length = 186504

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 299   atgttcccagtgcaaaagga 318
             ||||||||||||||||||||
Sbjct: 60826 atgttcccagtgcaaaagga 60845
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>gb|AC011815.7|AC011815 Homo sapiens chromosome , clone RP11-158H5, complete sequence
          Length = 156244

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 73     tcatccctggagatgtcatc 92
              ||||||||||||||||||||
Sbjct: 103919 tcatccctggagatgtcatc 103938
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>gb|AC154552.2| Mus musculus BAC clone RP23-414P13 from 13, complete sequence
          Length = 187806

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 46    gaaaaaatcaaacaagaaaaggta 69
             |||||||| |||||||||||||||
Sbjct: 36939 gaaaaaatgaaacaagaaaaggta 36962
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>emb|BX322637.7| Zebrafish DNA sequence from clone DKEY-22A1 in linkage group 9, complete
              sequence
          Length = 178563

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 43     aaagaaaaaatcaaacaaga 62
              ||||||||||||||||||||
Sbjct: 126424 aaagaaaaaatcaaacaaga 126405
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>gb|AC103618.6| Mus musculus chromosome 1, clone RP24-202B6, complete sequence
          Length = 141016

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 63     aaaggtatcatcatccctgg 82
              ||||||||||||||||||||
Sbjct: 120671 aaaggtatcatcatccctgg 120690
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>emb|AL357615.7|HS373D10 Homo sapiens chromosome 9 BAC RP11-373D10, complete sequence
          Length = 171446

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 47    aaaaaatcaaacaagaaaag 66
             ||||||||||||||||||||
Sbjct: 85940 aaaaaatcaaacaagaaaag 85959
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>gb|AC140243.2| Mus musculus BAC clone RP23-470F3 from 9, complete sequence
          Length = 201295

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 42     taaagaaaaaatcaaacaagaaaa 65
              ||||||||||||||||||| ||||
Sbjct: 121174 taaagaaaaaatcaaacaataaaa 121151
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>gb|AE005174.2| Escherichia coli O157:H7 EDL933, complete genome
          Length = 5528445

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 375     cagtctgttgcgccagctcg 394
               ||||||||||||||||||||
Sbjct: 4957174 cagtctgttgcgccagctcg 4957193
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>dbj|BA000007.2| Escherichia coli O157:H7 DNA, complete genome
          Length = 5498450

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 375     cagtctgttgcgccagctcg 394
               ||||||||||||||||||||
Sbjct: 4888410 cagtctgttgcgccagctcg 4888429
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>emb|AL672307.9| Mouse DNA sequence from clone RP23-141N2 on chromosome 2, complete
             sequence
          Length = 206168

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 33    tgtagtatgtaaagaaaaaa 52
             ||||||||||||||||||||
Sbjct: 53273 tgtagtatgtaaagaaaaaa 53292
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>emb|AL627134.9| Mouse DNA sequence from clone RP23-71I19 on chromosome 4, complete
              sequence
          Length = 172418

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 47     aaaaaatcaaacaagaaaag 66
              ||||||||||||||||||||
Sbjct: 164257 aaaaaatcaaacaagaaaag 164276
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>emb|AL391667.19| Human DNA sequence from clone RP11-214L15 on chromosome 9, complete
             sequence
          Length = 110444

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 47    aaaaaatcaaacaagaaaag 66
             ||||||||||||||||||||
Sbjct: 53257 aaaaaatcaaacaagaaaag 53276
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>dbj|AP003117.2| Homo sapiens genomic DNA, chromosome 8q23, clone: KB1958F4
          Length = 152176

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 48    aaaaatcaaacaagaaaagg 67
             ||||||||||||||||||||
Sbjct: 60509 aaaaatcaaacaagaaaagg 60490
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>dbj|AP003111.1| Homo sapiens genomic DNA, chromosome 8q23, clone:KB1255G1
          Length = 171035

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 48     aaaaatcaaacaagaaaagg 67
              ||||||||||||||||||||
Sbjct: 157170 aaaaatcaaacaagaaaagg 157151


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,083,276
Number of Sequences: 3902068
Number of extensions: 5083276
Number of successful extensions: 140948
Number of sequences better than 10.0: 73
Number of HSP's better than 10.0 without gapping: 73
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 140573
Number of HSP's gapped (non-prelim): 375
length of query: 534
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 511
effective length of database: 17,143,297,704
effective search space: 8760225126744
effective search space used: 8760225126744
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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