ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags26d13
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AC072052.6| Homo sapiens BAC clone CTD-2195F21 from 7, comple... 46 0.086
2gb|AC135190.2| Oryza sativa (japonica cultivar-group) chromosome... 44 0.34
3emb|AL359963.29| Human DNA sequence from clone RP11-18A3 on chro... 44 0.34
4gb|AC135644.2| Oryza sativa (japonica cultivar-group) chromosome... 44 0.34
5dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.34
6gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 44 0.34
7gb|AC119980.7| Mus musculus chromosome 8, clone RP24-495J19, com... 42 1.3
8ref|XM_429413.1| PREDICTED: Gallus gallus hypothetical gene supp... 42 1.3
9gb|AC148336.4| Mus musculus BAC clone RP23-21J15 from chromosome... 42 1.3
10gb|DQ415920.1| Cleome spinosa clone BAC Cs3, complete sequence 42 1.3
11gb|AC120887.2| Oryza sativa (japonica cultivar-group) chromosome... 42 1.3
12gb|AC138768.3| Mus musculus BAC clone RP24-465E14 from chromosom... 42 1.3
13emb|CR381640.8| Human DNA sequence from clone RP13-854E9 on chro... 42 1.3
14emb|AL356257.14| Human DNA sequence from clone RP11-789G22 on ch... 42 1.3
15gb|DQ354110.1| Streptomyces violaceusniger strain DSM 4137 polye... 42 1.3
16emb|CR407410.1| Gallus gallus finished cDNA, clone ChEST714h10 42 1.3
17gb|AC118721.9| Mus musculus chromosome 8, clone RP24-157I20, com... 42 1.3
18gb|AC140241.3| Mus musculus BAC clone RP23-283I15 from chromosom... 42 1.3
19gb|AC163715.5| Mus musculus BAC clone RP23-367H6 from chromosome... 42 1.3
20gb|AC153501.2| Mus musculus 10 BAC RP23-79J15 (Roswell Park Canc... 40 5.3
21ref|NM_112014.2| Arabidopsis thaliana unknown protein AT3G11810 ... 40 5.3
22gb|AC137120.22| Mus musculus chromosome 15, clone RP23-255G14, c... 40 5.3
23gb|AC136522.3| Oryza sativa (japonica cultivar-group) chromosome... 40 5.3
24gb|AF107258.1| Homo sapiens chromosome 21q22.1 PAC 295E05A, comp... 40 5.3
25gb|AC147721.6| Mus musculus chromosome 10, clone RP24-250J7, com... 40 5.3
26gb|AC119615.7| Rattus norvegicus 10 NOVECTOR CH230-502G21 (Child... 40 5.3
27gb|AC140884.2| Homo sapiens chromosome 16 clone RP11-1353K19, co... 40 5.3
28gb|AC125396.4| Mus musculus BAC clone RP24-69M4 from chromosome ... 40 5.3
29gb|AC127412.4| Mus musculus BAC clone RP23-234O14 from chromosom... 40 5.3
30gb|AC129020.4| Mus musculus BAC clone RP23-234A5 from chromosome... 40 5.3
31gb|AC016795.6|ATAC016795 Arabidopsis thaliana chromosome III BAC... 40 5.3
32gb|AC123032.5| Mus musculus BAC clone RP24-480K24 from chromosom... 40 5.3
33gb|AC123921.3| Mus musculus BAC clone RP24-180J14 from chromosom... 40 5.3
34emb|AL080274.21|HS1012F16 Human DNA sequence from clone RP5-1012... 40 5.3
35emb|AL035461.11|HS967N21 Human DNA sequence from clone RP5-967N2... 40 5.3
36emb|BX548034.14| Zebrafish DNA sequence from clone DKEY-106M16 i... 40 5.3
37emb|AL512586.13| Mouse DNA sequence from clone RP23-37O17 on chr... 40 5.3
38gb|AC156023.2| Mus musculus BAC clone RP23-210I15 from chromosom... 40 5.3
39gb|AC113398.3| Homo sapiens chromosome 5 clone RP11-436H11, comp... 40 5.3
40gb|AC112196.3| Homo sapiens chromosome 5 clone RP11-43D2, comple... 40 5.3
41gb|AC025198.12| Homo sapiens chromosome 17, clone RP11-766H1, co... 40 5.3
42ref|NM_164684.1| Drosophila melanogaster stathmin CG31641-RA, tr... 40 5.3
43ref|NM_164683.1| Drosophila melanogaster stathmin CG31641-RB, tr... 40 5.3
44ref|NM_164682.1| Drosophila melanogaster stathmin CG31641-RC, tr... 40 5.3
45gb|AY061071.1| Drosophila melanogaster LD04103 full length cDNA 40 5.3
46gb|AC026701.6| Homo sapiens chromosome 5 clone CTC-547D20, compl... 40 5.3
47gb|AC154546.2| Mus musculus BAC clone RP23-431I7 from chromosome... 40 5.3
48gb|AC092216.1|AC092216 Drosophila melanogaster, chromosome 2L, r... 40 5.3
49gb|AC008525.7|AC008525 Homo sapiens chromosome 5 clone CTC-467M3... 40 5.3
50dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.3
51gb|AC068294.26|AC068294 Mus musculus 3 BAC RP23-418O21 (Roswell ... 40 5.3
52gb|AC092144.4| Homo sapiens chromosome 16 clone RP11-572L10, com... 40 5.3
53emb|BX823133.1|CNS0A7D3 Arabidopsis thaliana Full-length cDNA Co... 40 5.3
54emb|BX825024.1|CNS0A5LN Arabidopsis thaliana Full-length cDNA Co... 40 5.3
55emb|BX294104.7| Zebrafish DNA sequence from clone CH211-245I22 i... 40 5.3
56gb|AF202990.1|AF202990 Drosophila melanogaster STATHMIN-19 (stat... 40 5.3
57dbj|BS000175.1| Pan troglodytes chromosome 22 clone:PTB-091H17, ... 40 5.3
58gb|AC115078.11| Mus musculus chromosome 3, clone RP24-457B22, co... 40 5.3
59gb|AC154366.2| Mus musculus BAC clone RP24-567I24 from 17, compl... 40 5.3
60gb|AC154628.2| Mus musculus BAC clone RP23-313L7 from 13, comple... 40 5.3
61gb|AE003612.2| Drosophila melanogaster chromosome 2L, section 21... 40 5.3
62dbj|AP001706.1| Homo sapiens genomic DNA, chromosome 21q, sectio... 40 5.3
63dbj|AP000236.2| Homo sapiens genomic DNA, chromosome 21q, clone:... 40 5.3
64gb|BT001751.1| Drosophila melanogaster RH02809 full insert cDNA 40 5.3
65dbj|AP003156.1| Mus musculus genomic DNA, chromosome 16q clone:R... 40 5.3
66gb|AC004639.1|AC004639 Drosophila melanogaster DNA sequence (P1 ... 40 5.3
67dbj|AP004962.1| Lotus japonicus genomic DNA, chromosome 1, clone... 40 5.3
68gb|AC164881.2| Mus musculus BAC clone RP23-246D7 from chromosome... 40 5.3
69emb|AL606934.12| Mouse DNA sequence from clone RP23-138L21 on ch... 40 5.3
70dbj|AB011006.1| Rattus norvegicus gene for leptin receptor, part... 40 5.3
71dbj|AP000196.1| Homo sapiens genomic DNA, chromosome 21q22.1, D2... 40 5.3
72dbj|AP000092.1| Homo sapiens genomic DNA of 21q22.1, GART and AM... 40 5.3 
>gb|AC072052.6| Homo sapiens BAC clone CTD-2195F21 from 7, complete sequence
          Length = 137074

 Score = 46.1 bits (23), Expect = 0.086
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                             
Query: 253    aggcctcttcttatctcttcctcctccctct 283
              |||||||| ||||||||| ||||||||||||
Sbjct: 111064 aggcctctacttatctctgcctcctccctct 111094
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>gb|AC135190.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone
              OSJNBa0064H09, complete sequence
          Length = 146742

 Score = 44.1 bits (22), Expect = 0.34
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 257    ctcttcttatctcttcctcctc 278
              ||||||||||||||||||||||
Sbjct: 124201 ctcttcttatctcttcctcctc 124222
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>emb|AL359963.29| Human DNA sequence from clone RP11-18A3 on chromosome 9 Contains a NADH
             dehydrogenase subunit 2 pseudogene, the 5' end of the
             EPB41L4B gene for erythrocyte membrane protein band 4.1
             like 4B, the 3' end of the PTPN3 gene for protein tyrosine
             phosphatase (non-receptor type 3), and one CpG island,
             complete sequence
          Length = 134979

 Score = 44.1 bits (22), Expect = 0.34
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 257   ctcttcttatctcttcctcctccctc 282
             |||||||||||||| |||||||||||
Sbjct: 16507 ctcttcttatctctgcctcctccctc 16482
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>gb|AC135644.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone
              OSJNBa0085H07, complete sequence
          Length = 133291

 Score = 44.1 bits (22), Expect = 0.34
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 257    ctcttcttatctcttcctcctc 278
              ||||||||||||||||||||||
Sbjct: 126154 ctcttcttatctcttcctcctc 126133
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score = 44.1 bits (22), Expect = 0.34
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                      
Query: 257      ctcttcttatctcttcctcctc 278
                ||||||||||||||||||||||
Sbjct: 26819637 ctcttcttatctcttcctcctc 26819658



 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 266      tctcttcctcctccctctcta 286
                |||||||||||||||||||||
Sbjct: 22837378 tctcttcctcctccctctcta 22837398
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 44.1 bits (22), Expect = 0.34
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                      
Query: 257      ctcttcttatctcttcctcctc 278
                ||||||||||||||||||||||
Sbjct: 27146805 ctcttcttatctcttcctcctc 27146826



 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 266      tctcttcctcctccctctcta 286
                |||||||||||||||||||||
Sbjct: 23147288 tctcttcctcctccctctcta 23147308
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>gb|AC119980.7| Mus musculus chromosome 8, clone RP24-495J19, complete sequence
          Length = 145150

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 258   tcttcttatctcttcctcctc 278
             |||||||||||||||||||||
Sbjct: 13149 tcttcttatctcttcctcctc 13169
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>ref|XM_429413.1| PREDICTED: Gallus gallus hypothetical gene supported by CR407410
           (LOC416292), mRNA
          Length = 1707

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 26  agaaagaaatgtcagcatgta 46
           |||||||||||||||||||||
Sbjct: 673 agaaagaaatgtcagcatgta 693
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>gb|AC148336.4| Mus musculus BAC clone RP23-21J15 from chromosome 18, complete sequence
          Length = 238060

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 265    atctcttcctcctccctctct 285
              |||||||||||||||||||||
Sbjct: 129382 atctcttcctcctccctctct 129362
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>gb|DQ415920.1| Cleome spinosa clone BAC Cs3, complete sequence
          Length = 141360

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 258   tcttcttatctcttcctcctccctc 282
             |||| ||||||||||||||||||||
Sbjct: 92101 tcttattatctcttcctcctccctc 92077
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>gb|AC120887.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone
             OSJNBa0088K21, complete sequence
          Length = 153239

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 266   tctcttcctcctccctctcta 286
             |||||||||||||||||||||
Sbjct: 97095 tctcttcctcctccctctcta 97115
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>gb|AC138768.3| Mus musculus BAC clone RP24-465E14 from chromosome 18, complete sequence
          Length = 158065

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 265    atctcttcctcctccctctct 285
              |||||||||||||||||||||
Sbjct: 156648 atctcttcctcctccctctct 156668
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>emb|CR381640.8| Human DNA sequence from clone RP13-854E9 on chromosome X, complete
             sequence
          Length = 63682

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                          
Query: 256   cctcttcttatctcttcctcctccctctc 284
             ||||| ||| |||||||||||||||||||
Sbjct: 62537 cctctccttttctcttcctcctccctctc 62509
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>emb|AL356257.14| Human DNA sequence from clone RP11-789G22 on chromosome 13 Contains the
             5' end of the ABCC4 gene for ATP-binding cassette,
             sub-family C (CFTR/MRP), member4, a novel gene and a CpG
             island, complete sequence
          Length = 193483

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                             
Query: 19    aaagnaaagaaagaaatgtcagcatgtatatg 50
             |||| |||||||||||| ||| ||||||||||
Sbjct: 84900 aaagaaaagaaagaaatatcaacatgtatatg 84931
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>gb|DQ354110.1| Streptomyces violaceusniger strain DSM 4137 polyether nigericin
             biosynthetic gene cluster, complete sequence
          Length = 95700

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 157   cggcgcggccgttcgttcctc 177
             |||||||||||||||||||||
Sbjct: 29090 cggcgcggccgttcgttcctc 29070
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>emb|CR407410.1| Gallus gallus finished cDNA, clone ChEST714h10
          Length = 1347

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 26  agaaagaaatgtcagcatgta 46
           |||||||||||||||||||||
Sbjct: 313 agaaagaaatgtcagcatgta 333
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>gb|AC118721.9| Mus musculus chromosome 8, clone RP24-157I20, complete sequence
          Length = 161212

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 258   tcttcttatctcttcctcctc 278
             |||||||||||||||||||||
Sbjct: 10742 tcttcttatctcttcctcctc 10722
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>gb|AC140241.3| Mus musculus BAC clone RP23-283I15 from chromosome 17, complete
             sequence
          Length = 158575

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 261   tcttatctcttcctcctccct 281
             |||||||||||||||||||||
Sbjct: 22275 tcttatctcttcctcctccct 22295
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>gb|AC163715.5| Mus musculus BAC clone RP23-367H6 from chromosome 17, complete sequence
          Length = 208781

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 261   tcttatctcttcctcctccct 281
             |||||||||||||||||||||
Sbjct: 51805 tcttatctcttcctcctccct 51825
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>gb|AC153501.2| Mus musculus 10 BAC RP23-79J15 (Roswell Park Cancer Institute (C57BL/6J
             Female) Mouse BAC Library) complete sequence
          Length = 251631

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 258   tcttcttatctcttcctcctccct 281
             |||||||| |||||||||||||||
Sbjct: 83039 tcttcttagctcttcctcctccct 83062
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>ref|NM_112014.2| Arabidopsis thaliana unknown protein AT3G11810 mRNA, complete cds
          Length = 1236

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 266 tctcttcctcctccctctct 285
           ||||||||||||||||||||
Sbjct: 137 tctcttcctcctccctctct 156
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>gb|AC137120.22| Mus musculus chromosome 15, clone RP23-255G14, complete sequence
          Length = 203811

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 257   ctcttcttatctcttcctcctccc 280
             |||||||| |||||||||||||||
Sbjct: 47826 ctcttcttctctcttcctcctccc 47849
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>gb|AC136522.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0037H03,
              complete sequence
          Length = 185881

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 34     atgtcagcatgtatatgtat 53
              ||||||||||||||||||||
Sbjct: 166963 atgtcagcatgtatatgtat 166944
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>gb|AF107258.1| Homo sapiens chromosome 21q22.1 PAC 295E05A, complete sequence
          Length = 154311

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 120    catccttctcaaatggaaac 139
              ||||||||||||||||||||
Sbjct: 125123 catccttctcaaatggaaac 125142
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>gb|AC147721.6| Mus musculus chromosome 10, clone RP24-250J7, complete sequence
          Length = 70656

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 311   gtcaggagctttatttttctctga 334
             ||||| ||||||||||||||||||
Sbjct: 48402 gtcagtagctttatttttctctga 48425
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>gb|AC119615.7| Rattus norvegicus 10 NOVECTOR CH230-502G21 (Children's Hospital Oakland
              Research Institute) complete sequence
          Length = 156223

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 266    tctcttcctcctccctctct 285
              ||||||||||||||||||||
Sbjct: 135016 tctcttcctcctccctctct 134997
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>gb|AC140884.2| Homo sapiens chromosome 16 clone RP11-1353K19, complete sequence
          Length = 203870

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 266    tctcttcctcctccctctct 285
              ||||||||||||||||||||
Sbjct: 201132 tctcttcctcctccctctct 201113
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>gb|AC125396.4| Mus musculus BAC clone RP24-69M4 from chromosome 16, complete sequence
          Length = 179186

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 266   tctcttcctcctccctctct 285
             ||||||||||||||||||||
Sbjct: 45958 tctcttcctcctccctctct 45977
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>gb|AC127412.4| Mus musculus BAC clone RP23-234O14 from chromosome 16, complete sequence
          Length = 225685

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 266    tctcttcctcctccctctct 285
              ||||||||||||||||||||
Sbjct: 210738 tctcttcctcctccctctct 210757
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>gb|AC129020.4| Mus musculus BAC clone RP23-234A5 from chromosome 16, complete sequence
          Length = 192668

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 256    cctcttcttatctcttcctc 275
              ||||||||||||||||||||
Sbjct: 152617 cctcttcttatctcttcctc 152636
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>gb|AC016795.6|ATAC016795 Arabidopsis thaliana chromosome III BAC F26K24 genomic sequence,
             complete sequence
          Length = 100835

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 266   tctcttcctcctccctctct 285
             ||||||||||||||||||||
Sbjct: 28462 tctcttcctcctccctctct 28481
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>gb|AC123032.5| Mus musculus BAC clone RP24-480K24 from chromosome 10, complete sequence
          Length = 162676

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 311    gtcaggagctttatttttctctga 334
              ||||| ||||||||||||||||||
Sbjct: 161228 gtcagtagctttatttttctctga 161251
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>gb|AC123921.3| Mus musculus BAC clone RP24-180J14 from chromosome 8, complete sequence
          Length = 183936

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 266    tctcttcctcctccctctct 285
              ||||||||||||||||||||
Sbjct: 116527 tctcttcctcctccctctct 116508
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>emb|AL080274.21|HS1012F16 Human DNA sequence from clone RP5-1012F16 on chromosome 20 Contains a
             novel gene, ESTs, STSs and GSSs, complete sequence
          Length = 74539

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 293   gcatgcatctaaaaatatgt 312
             ||||||||||||||||||||
Sbjct: 42207 gcatgcatctaaaaatatgt 42188
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>emb|AL035461.11|HS967N21 Human DNA sequence from clone RP5-967N21 on chromosome 20p12.3-13
            Contains the CHGB gene for chromogranin B (secretogranin
            1), a novel pseudogene, the gene for CGI-09 protein
            (CGI-09), the C20orf154 gene for a novel MCM2/3/5 family
            member, a pseudogene similar to part of cytochrome c
            oxidase I, the C20orf155 gene for a novel CDP-alcohol
            phosphatidyltransferase family member, the 3' end of a
            novel gene and four CpG islands, complete sequence
          Length = 139352

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 266  tctcttcctcctccctctct 285
            ||||||||||||||||||||
Sbjct: 4178 tctcttcctcctccctctct 4159
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>emb|BX548034.14| Zebrafish DNA sequence from clone DKEY-106M16 in linkage group 1,
              complete sequence
          Length = 199490

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 114    catcaacatccttctcaaat 133
              ||||||||||||||||||||
Sbjct: 190932 catcaacatccttctcaaat 190951
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>emb|AL512586.13| Mouse DNA sequence from clone RP23-37O17 on chromosome 4, complete
             sequence
          Length = 67971

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 266   tctcttcctcctccctctct 285
             ||||||||||||||||||||
Sbjct: 40054 tctcttcctcctccctctct 40073
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>gb|AC156023.2| Mus musculus BAC clone RP23-210I15 from chromosome 16, complete sequence
          Length = 196765

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 266    tctcttcctcctccctctct 285
              ||||||||||||||||||||
Sbjct: 108119 tctcttcctcctccctctct 108138
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>gb|AC113398.3| Homo sapiens chromosome 5 clone RP11-436H11, complete sequence
          Length = 172613

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 266   tctcttcctcctccctctct 285
             ||||||||||||||||||||
Sbjct: 12681 tctcttcctcctccctctct 12700
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>gb|AC112196.3| Homo sapiens chromosome 5 clone RP11-43D2, complete sequence
          Length = 180001

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 266    tctcttcctcctccctctct 285
              ||||||||||||||||||||
Sbjct: 110511 tctcttcctcctccctctct 110530
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>gb|AC025198.12| Homo sapiens chromosome 17, clone RP11-766H1, complete sequence
          Length = 198524

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 266   tctcttcctcctccctctct 285
             ||||||||||||||||||||
Sbjct: 70909 tctcttcctcctccctctct 70928
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>ref|NM_164684.1| Drosophila melanogaster stathmin CG31641-RA, transcript variant A
            (stai), mRNA
          Length = 2059

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 37   tcagcatgtatatgtatcat 56
            ||||||||||||||||||||
Sbjct: 1920 tcagcatgtatatgtatcat 1901
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>ref|NM_164683.1| Drosophila melanogaster stathmin CG31641-RB, transcript variant B
            (stai), mRNA
          Length = 2215

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 37   tcagcatgtatatgtatcat 56
            ||||||||||||||||||||
Sbjct: 2076 tcagcatgtatatgtatcat 2057
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>ref|NM_164682.1| Drosophila melanogaster stathmin CG31641-RC, transcript variant C
            (stai), mRNA
          Length = 1864

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 37   tcagcatgtatatgtatcat 56
            ||||||||||||||||||||
Sbjct: 1725 tcagcatgtatatgtatcat 1706
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>gb|AY061071.1| Drosophila melanogaster LD04103 full length cDNA
          Length = 2073

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 37   tcagcatgtatatgtatcat 56
            ||||||||||||||||||||
Sbjct: 1919 tcagcatgtatatgtatcat 1900
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>gb|AC026701.6| Homo sapiens chromosome 5 clone CTC-547D20, complete sequence
          Length = 87338

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 267   ctcttcctcctccctctctaacaa 290
             ||||||||||||| ||||||||||
Sbjct: 49074 ctcttcctcctccttctctaacaa 49097
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>gb|AC154546.2| Mus musculus BAC clone RP23-431I7 from chromosome 16, complete sequence
          Length = 180261

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 266    tctcttcctcctccctctct 285
              ||||||||||||||||||||
Sbjct: 113770 tctcttcctcctccctctct 113751
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>gb|AC092216.1|AC092216 Drosophila melanogaster, chromosome 2L, region 25F-26A, BAC clone
             BACR10M11, complete sequence
          Length = 174832

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 37    tcagcatgtatatgtatcat 56
             ||||||||||||||||||||
Sbjct: 26651 tcagcatgtatatgtatcat 26670
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>gb|AC008525.7|AC008525 Homo sapiens chromosome 5 clone CTC-467M3, complete sequence
          Length = 123238

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 267  ctcttcctcctccctctctaacaa 290
            ||||||||||||| ||||||||||
Sbjct: 6316 ctcttcctcctccttctctaacaa 6293
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 34       atgtcagcatgtatatgtat 53
                ||||||||||||||||||||
Sbjct: 10782363 atgtcagcatgtatatgtat 10782344
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>gb|AC068294.26|AC068294 Mus musculus 3 BAC RP23-418O21 (Roswell Park Cancer Institute Mouse BAC
             Library) complete sequence
          Length = 201750

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 252   caggcctcttcttatctctt 271
             ||||||||||||||||||||
Sbjct: 26242 caggcctcttcttatctctt 26261
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>gb|AC092144.4| Homo sapiens chromosome 16 clone RP11-572L10, complete sequence
          Length = 186711

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 266   tctcttcctcctccctctct 285
             ||||||||||||||||||||
Sbjct: 68186 tctcttcctcctccctctct 68167
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>emb|BX823133.1|CNS0A7D3 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB92ZD09 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 1185

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 266 tctcttcctcctccctctct 285
           ||||||||||||||||||||
Sbjct: 151 tctcttcctcctccctctct 170
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>emb|BX825024.1|CNS0A5LN Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTPGH90ZB08 of Hormone Treated Callus of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1151

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 266 tctcttcctcctccctctct 285
           ||||||||||||||||||||
Sbjct: 106 tctcttcctcctccctctct 125
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>emb|BX294104.7| Zebrafish DNA sequence from clone CH211-245I22 in linkage group 1,
              complete sequence
          Length = 161644

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 114    catcaacatccttctcaaat 133
              ||||||||||||||||||||
Sbjct: 128136 catcaacatccttctcaaat 128155
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>gb|AF202990.1|AF202990 Drosophila melanogaster STATHMIN-19 (stathmin) mRNA, partial cds
          Length = 1787

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 37   tcagcatgtatatgtatcat 56
            ||||||||||||||||||||
Sbjct: 1466 tcagcatgtatatgtatcat 1447
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>dbj|BS000175.1| Pan troglodytes chromosome 22 clone:PTB-091H17, map 22, complete
              sequences
          Length = 183155

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 120    catccttctcaaatggaaac 139
              ||||||||||||||||||||
Sbjct: 153275 catccttctcaaatggaaac 153294
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>gb|AC115078.11| Mus musculus chromosome 3, clone RP24-457B22, complete sequence
          Length = 179789

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 252   caggcctcttcttatctctt 271
             ||||||||||||||||||||
Sbjct: 23378 caggcctcttcttatctctt 23359
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>gb|AC154366.2| Mus musculus BAC clone RP24-567I24 from 17, complete sequence
          Length = 147597

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 266   tctcttcctcctccctctct 285
             ||||||||||||||||||||
Sbjct: 35055 tctcttcctcctccctctct 35074
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>gb|AC154628.2| Mus musculus BAC clone RP23-313L7 from 13, complete sequence
          Length = 212309

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 29     aagaaatgtcagcatgtata 48
              ||||||||||||||||||||
Sbjct: 126002 aagaaatgtcagcatgtata 125983
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>gb|AE003612.2| Drosophila melanogaster chromosome 2L, section 21 of 83 of the complete
              sequence
          Length = 260673

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 37     tcagcatgtatatgtatcat 56
              ||||||||||||||||||||
Sbjct: 167428 tcagcatgtatatgtatcat 167409
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>dbj|AP001706.1| Homo sapiens genomic DNA, chromosome 21q, section 50/105
          Length = 340000

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 120    catccttctcaaatggaaac 139
              ||||||||||||||||||||
Sbjct: 186434 catccttctcaaatggaaac 186453
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>dbj|AP000236.2| Homo sapiens genomic DNA, chromosome 21q, clone:RP11-355D16, complete
            sequence
          Length = 159121

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 120  catccttctcaaatggaaac 139
            ||||||||||||||||||||
Sbjct: 6534 catccttctcaaatggaaac 6553
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>gb|BT001751.1| Drosophila melanogaster RH02809 full insert cDNA
          Length = 1824

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 37   tcagcatgtatatgtatcat 56
            ||||||||||||||||||||
Sbjct: 1724 tcagcatgtatatgtatcat 1705
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>dbj|AP003156.1| Mus musculus genomic DNA, chromosome 16q clone:RP21-56O15, complete
              sequences
          Length = 162128

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 266    tctcttcctcctccctctct 285
              ||||||||||||||||||||
Sbjct: 106124 tctcttcctcctccctctct 106143
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>gb|AC004639.1|AC004639 Drosophila melanogaster DNA sequence (P1 DS06863 (D124)), complete
             sequence
          Length = 78419

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 37    tcagcatgtatatgtatcat 56
             ||||||||||||||||||||
Sbjct: 44509 tcagcatgtatatgtatcat 44528
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>dbj|AP004962.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT28H14, TM0141,
             complete sequence
          Length = 100810

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 320   tttatttttctctgagaagc 339
             ||||||||||||||||||||
Sbjct: 15320 tttatttttctctgagaagc 15339
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>gb|AC164881.2| Mus musculus BAC clone RP23-246D7 from chromosome 9, complete sequence
          Length = 201645

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 266    tctcttcctcctccctctct 285
              ||||||||||||||||||||
Sbjct: 142033 tctcttcctcctccctctct 142052
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>emb|AL606934.12| Mouse DNA sequence from clone RP23-138L21 on chromosome 4, complete
              sequence
          Length = 211580

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 263    ttatctcttcctcctccctc 282
              ||||||||||||||||||||
Sbjct: 171799 ttatctcttcctcctccctc 171780
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>dbj|AB011006.1| Rattus norvegicus gene for leptin receptor, partial cds
          Length = 17935

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 256  cctcttcttatctcttcctcctcc 279
            ||||||| ||||||||||||||||
Sbjct: 6272 cctcttcctatctcttcctcctcc 6295
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>dbj|AP000196.1| Homo sapiens genomic DNA, chromosome 21q22.1, D21S226-AML region, clone
             B355D16-T1073, segment 2/8, complete sequence
          Length = 100000

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 120   catccttctcaaatggaaac 139
             ||||||||||||||||||||
Sbjct: 52588 catccttctcaaatggaaac 52569
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>dbj|AP000092.1| Homo sapiens genomic DNA of 21q22.1, GART and AML related,
             B335D16-P10G11 region, segment 2/7
          Length = 100000

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 120   catccttctcaaatggaaac 139
             ||||||||||||||||||||
Sbjct: 52588 catccttctcaaatggaaac 52569


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,844,267
Number of Sequences: 3902068
Number of extensions: 5844267
Number of successful extensions: 114152
Number of sequences better than 10.0: 72
Number of HSP's better than 10.0 without gapping: 74
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 113851
Number of HSP's gapped (non-prelim): 301
length of query: 397
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 375
effective length of database: 17,147,199,772
effective search space: 6430199914500
effective search space used: 6430199914500
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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