>KIN11_ARATH (P92958) SNF1-related protein kinase catalytic alpha subunit KIN11|
           (EC 2.7.11.1) (AKIN11) (AKIN alpha1)
          Length = 512

 Score = 35.4 bits (80), Expect = 0.077
 Identities = 19/59 (32%), Positives = 32/59 (54%)
 Frame = -1

Query: 368 LPQAEPVSSSPTAASGNRVALDDVVEKVATMGFSREQVRATVRRLTENGQNVDLNVVLD 192
           LP+   VS   T     ++  +++V++V  MGF R QV  ++R  T+N   V   ++LD
Sbjct: 276 LPRYLAVSPPDTVEQAKKIN-EEIVQEVVNMGFDRNQVLESLRNRTQNDATVTYYLLLD 333

>YD6C_SCHPO (Q10324) Hypothetical protein C17G8.12 in chromosome I|
          Length = 608

 Score = 30.8 bits (68), Expect = 1.9
 Identities = 20/57 (35%), Positives = 27/57 (47%)
 Frame = +1

Query: 187 SLSSTTFRSTFCPFSVSLRTVALTCSLENPMVATFSTTSSRATLLPDAAVGLELTGS 357
           SL S TF S F          AL+ SLE P V T S   S ++ +   +V  + TG+
Sbjct: 367 SLESNTFASDFSKVDRDATQAALSSSLETPSVLTSSYKPSSSSKVSAKSVSRKPTGA 423

>UVRA_LEPIN (Q8F435) UvrABC system protein A (UvrA protein) (Excinuclease ABC|
           subunit A)
          Length = 948

 Score = 29.3 bits (64), Expect = 5.5
 Identities = 16/66 (24%), Positives = 30/66 (45%), Gaps = 5/66 (7%)
 Frame = -1

Query: 365 PQAEPVSSSPTAASGNRVALDDVVEKVATMGFSREQVRATVRRLTE-----NGQNVDLNV 201
           PQ   +       SG +    DV+EK+   GF+R ++   +R L E           + +
Sbjct: 143 PQGSKLQILAPVISGKKGEHKDVLEKIRKDGFNRVRINGEIRTLEEEIVLKKNFKTSIEI 202

Query: 200 VLDKLM 183
           V+D+++
Sbjct: 203 VVDRIV 208

>UVRA_LEPIC (Q72RM8) UvrABC system protein A (UvrA protein) (Excinuclease ABC|
           subunit A)
          Length = 948

 Score = 29.3 bits (64), Expect = 5.5
 Identities = 16/66 (24%), Positives = 30/66 (45%), Gaps = 5/66 (7%)
 Frame = -1

Query: 365 PQAEPVSSSPTAASGNRVALDDVVEKVATMGFSREQVRATVRRLTE-----NGQNVDLNV 201
           PQ   +       SG +    DV+EK+   GF+R ++   +R L E           + +
Sbjct: 143 PQGSKLQILAPVISGKKGEHKDVLEKIRKDGFNRVRINGEIRTLEEEIVLKKNFKTSIEI 202

Query: 200 VLDKLM 183
           V+D+++
Sbjct: 203 VVDRIV 208

>AGA1_YEAST (P32323) A-agglutinin attachment subunit precursor|
          Length = 725

 Score = 29.3 bits (64), Expect = 5.5
 Identities = 20/76 (26%), Positives = 35/76 (46%)
 Frame = +1

Query: 115 KYYTQTVTNGSVACRRILTYHPFISLSSTTFRSTFCPFSVSLRTVALTCSLENPMVATFS 294
           +Y T++  + ++    + TY   +S   TT  +T+CP+S    T  LT   E   V T +
Sbjct: 379 EYITKSSISTTIPSFSMSTYFTTVS-GVTTMYTTWCPYSSESETSTLTSMHET--VTTDA 435

Query: 295 TTSSRATLLPDAAVGL 342
           T  +  + +P     L
Sbjct: 436 TVCTHESCMPSQTTSL 451

>VC09_VACCV (P17372) Ankyrin repeat protein C9|
          Length = 634

 Score = 28.9 bits (63), Expect = 7.2
 Identities = 14/39 (35%), Positives = 22/39 (56%)
 Frame = +3

Query: 207 QVDVLPILGQPPHGCPYLLS*EPHGCNLLYHIIEGHPVA 323
           ++DVL IL         +   + HGC++LYH I+ H V+
Sbjct: 389 ELDVLSILKLCKPYIDDINKIDKHGCSILYHCIKSHSVS 427

>VC09_VACCC (P21042) Ankyrin repeat protein C9|
          Length = 634

 Score = 28.9 bits (63), Expect = 7.2
 Identities = 14/39 (35%), Positives = 22/39 (56%)
 Frame = +3

Query: 207 QVDVLPILGQPPHGCPYLLS*EPHGCNLLYHIIEGHPVA 323
           ++DVL IL         +   + HGC++LYH I+ H V+
Sbjct: 389 ELDVLSILKLCKPYIDDINKIDKHGCSILYHCIKSHSVS 427

>KIN10_ARATH (Q38997) SNF1-related protein kinase catalytic alpha subunit KIN10|
           (EC 2.7.11.1) (AKIN10) (AKIN alpha2)
          Length = 535

 Score = 28.9 bits (63), Expect = 7.2
 Identities = 15/59 (25%), Positives = 30/59 (50%)
 Frame = -1

Query: 368 LPQAEPVSSSPTAASGNRVALDDVVEKVATMGFSREQVRATVRRLTENGQNVDLNVVLD 192
           LP+   V    T     ++  ++++++V  MGF R  +  ++R  T+N   V   ++LD
Sbjct: 298 LPRYLAVPPPDTVQQAKKID-EEILQEVINMGFDRNHLIESLRNRTQNDGTVTYYLILD 355


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 71,449,235
Number of Sequences: 219361
Number of extensions: 1463978
Number of successful extensions: 3942
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 3832
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3941
length of database: 80,573,946
effective HSP length: 103
effective length of database: 57,979,763
effective search space used: 3188886965
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)