>Y4105_ARATH (Q9M158) Putative protein At4g01050|
          Length = 466

 Score = 36.2 bits (82), Expect = 0.074
 Identities = 22/46 (47%), Positives = 24/46 (52%), Gaps = 6/46 (13%)
 Frame = -3

Query: 440 VTESPPVEVNSAPVAEAV------EESLPPAKPRPLSPYANYPDLK 321
           V E  PV    A VA  V       E+ P    RPLSPYA+YPDLK
Sbjct: 411 VPEPVPVPAIEAAVAAQVITEPTETEAKPKPHSRPLSPYASYPDLK 456



 Score = 33.5 bits (75), Expect = 0.48
 Identities = 20/35 (57%), Positives = 23/35 (65%), Gaps = 5/35 (14%)
 Frame = -3

Query: 593 APAAEASTELPPETAT-----SRPLSPFANYPDLK 504
           A AA+  TE P ET       SRPLSP+A+YPDLK
Sbjct: 423 AVAAQVITE-PTETEAKPKPHSRPLSPYASYPDLK 456

>TSH1_HUMAN (Q6ZSZ6) Teashirt homolog 1 (Serologically defined colon cancer|
           antigen 3) (Antigen NY-CO-33)
          Length = 1077

 Score = 36.2 bits (82), Expect = 0.074
 Identities = 28/84 (33%), Positives = 34/84 (40%)
 Frame = -3

Query: 575 STELPPETATSRPLSPFANYPDLKXXXXXXXXXSEGKTEVKADVAVTESPPVEVNSAPVA 396
           S  LPP T T  P S     PD           SE K E +      E PPV  ++  + 
Sbjct: 467 SIPLPPTTHTRLPASSIKKQPD----SPAGSTTSEEKKEPEK-----EKPPVAGDAEKIK 517

Query: 395 EAVEESLPPAKPRPLSPYANYPDL 324
           E  E+SL   +P  L PY    DL
Sbjct: 518 EESEDSLEKFEPSTLYPYLREEDL 541

>K2C6B_HUMAN (P04259) Keratin, type II cytoskeletal 6B (Cytokeratin-6B) (CK 6B)|
           (K6b keratin)
          Length = 563

 Score = 35.4 bits (80), Expect = 0.13
 Identities = 20/42 (47%), Positives = 24/42 (57%)
 Frame = +1

Query: 337 FAYGERGLGFAGGNDSSTASATGAELTSTGGDSVTATSAFTS 462
           ++YG  GLG  GG  SS+  ATG  L+S GG S T     TS
Sbjct: 514 YSYGS-GLGVGGGFSSSSGRATGGGLSSVGGGSSTIKYTTTS 554

>K2C6E_HUMAN (P48668) Keratin, type II cytoskeletal 6E (Cytokeratin-6E) (CK 6E)|
           (K6e keratin) (Keratin K6h)
          Length = 563

 Score = 33.5 bits (75), Expect = 0.48
 Identities = 19/42 (45%), Positives = 23/42 (54%)
 Frame = +1

Query: 337 FAYGERGLGFAGGNDSSTASATGAELTSTGGDSVTATSAFTS 462
           ++YG  GLG  GG  SS+  A G  L+S GG S T     TS
Sbjct: 514 YSYGS-GLGIGGGFSSSSGRAIGGGLSSVGGGSSTIKYTTTS 554

>K2C6D_HUMAN (P48667) Keratin, type II cytoskeletal 6D (Cytokeratin-6D) (CK 6D)|
           (K6d keratin) (Fragment)
          Length = 384

 Score = 33.1 bits (74), Expect = 0.62
 Identities = 19/42 (45%), Positives = 23/42 (54%)
 Frame = +1

Query: 337 FAYGERGLGFAGGNDSSTASATGAELTSTGGDSVTATSAFTS 462
           ++YG  GLG  GG  SS+  A G  L+S GG S T     TS
Sbjct: 335 YSYGS-GLGVGGGFSSSSGRAIGGGLSSVGGGSSTIKYTTTS 375

>K2C6C_HUMAN (P48666) Keratin, type II cytoskeletal 6C (Cytokeratin-6C) (CK 6C)|
           (K6c keratin)
          Length = 563

 Score = 33.1 bits (74), Expect = 0.62
 Identities = 19/42 (45%), Positives = 23/42 (54%)
 Frame = +1

Query: 337 FAYGERGLGFAGGNDSSTASATGAELTSTGGDSVTATSAFTS 462
           ++YG  GLG  GG  SS+  A G  L+S GG S T     TS
Sbjct: 514 YSYGS-GLGVGGGFSSSSGRAIGGGLSSVGGGSSTIKYTTTS 554

>K2C6A_HUMAN (P02538) Keratin, type II cytoskeletal 6A (Cytokeratin-6A) (CK 6A)|
           (K6a keratin)
          Length = 563

 Score = 33.1 bits (74), Expect = 0.62
 Identities = 19/42 (45%), Positives = 23/42 (54%)
 Frame = +1

Query: 337 FAYGERGLGFAGGNDSSTASATGAELTSTGGDSVTATSAFTS 462
           ++YG  GLG  GG  SS+  A G  L+S GG S T     TS
Sbjct: 514 YSYGS-GLGVGGGFSSSSGRAIGGGLSSVGGGSSTIKYTTTS 554

>SALL1_HUMAN (Q9NSC2) Sal-like protein 1 (Zinc finger protein SALL1) (Spalt-like|
           transcription factor 1) (HSal1)
          Length = 1324

 Score = 32.0 bits (71), Expect = 1.4
 Identities = 18/42 (42%), Positives = 26/42 (61%), Gaps = 3/42 (7%)
 Frame = +1

Query: 355 GLGFAGGNDSSTASATGAELTST---GGDSVTATSAFTSVLP 471
           G G + G+ SSTA ++ +  +S+   GG S T TSA T+ LP
Sbjct: 136 GSGTSSGSHSSTAPSSSSSSSSSSGGGGSSSTGTSAITTSLP 177

>PCLO_HUMAN (Q9Y6V0) Protein piccolo (Aczonin)|
          Length = 5183

 Score = 30.8 bits (68), Expect = 3.1
 Identities = 22/92 (23%), Positives = 38/92 (41%), Gaps = 4/92 (4%)
 Frame = -3

Query: 593  APAAEASTELPPETATSRPLSPFANYPDLKXXXXXXXXXSEGKTEVKADVAVTES----P 426
            AP+   +++ PP++    P +P  + P  K          E K E    V  TE+    P
Sbjct: 915  APSQPPTSQGPPKSTGQAPPAPAKSIPVKKETKAPAAEKLEPKAEQAPTVKRTETEKKPP 974

Query: 425  PVEVNSAPVAEAVEESLPPAKPRPLSPYANYP 330
            P++ + +  AE  +  LP    +   P +  P
Sbjct: 975  PIKDSKSLTAEPQKAVLPTKLEKSPKPESTCP 1006

>SOX14_DROME (P40656) Putative transcription factor SOX-14|
          Length = 472

 Score = 30.8 bits (68), Expect = 3.1
 Identities = 20/76 (26%), Positives = 31/76 (40%)
 Frame = -3

Query: 563 PPETATSRPLSPFANYPDLKXXXXXXXXXSEGKTEVKADVAVTESPPVEVNSAPVAEAVE 384
           P   +T   L PF+  P            + G  + ++  A+T    V   SAPVA A  
Sbjct: 44  PKADSTPHTLPPFSPSPSPASSPSPAPAQTPGAQKTQSQAAITHPAAVASPSAPVAAAAP 103

Query: 383 ESLPPAKPRPLSPYAN 336
           ++  P  P P S + +
Sbjct: 104 KT--PKTPEPRSTHTH 117

>HTRA_LACLA (Q9LA06) Serine protease do-like htrA (EC 3.4.21.-) (HtrALl)|
          Length = 408

 Score = 30.4 bits (67), Expect = 4.0
 Identities = 21/74 (28%), Positives = 30/74 (40%)
 Frame = +1

Query: 370 GGNDSSTASATGAELTSTGGDSVTATSAFTSVLPXXXXXXXXXXXXXXXXFANGDRGLDV 549
           GGN  S++S  G +L+S G   +   S   + +                    G+  LDV
Sbjct: 90  GGNSGSSSSTDGLQLSSEGSGVIYKKSGGDAYVVTNYHVIA------------GNSSLDV 137

Query: 550 AVSGGNSVLASAAG 591
            +SGG  V AS  G
Sbjct: 138 LLSGGQKVKASVVG 151

>TTLL5_HUMAN (Q6EMB2) Tubulin--tyrosine ligase-like protein 5 (SRC1 and|
           TIF2-associated modulatory protein)
          Length = 1277

 Score = 29.3 bits (64), Expect = 9.0
 Identities = 10/20 (50%), Positives = 14/20 (70%)
 Frame = -1

Query: 538 PCHHLQIIQISNHRPALPHQ 479
           PCHH  + QI +  P++PHQ
Sbjct: 908 PCHHSSLSQIPSAIPSMPHQ 927

>US10_HCMVA (P09728) Unique short US10 glycoprotein precursor (gpUS10) (HXLF2)|
          Length = 185

 Score = 29.3 bits (64), Expect = 9.0
 Identities = 16/41 (39%), Positives = 23/41 (56%)
 Frame = +3

Query: 114 SSTITRAKRIDHWRYICTA*DLGTLARCLMNRSMSLYAWFL 236
           S+T+T A R  + R++C   D GT    LMN +   Y W+L
Sbjct: 113 SATLTLASRDCYERFVCPVYDSGTPMGVLMNLT---YLWYL 150


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 79,775,438
Number of Sequences: 219361
Number of extensions: 1472557
Number of successful extensions: 4692
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 4328
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4663
length of database: 80,573,946
effective HSP length: 106
effective length of database: 57,321,680
effective search space used: 5216272880
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)