>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
               sequence
          Length = 35954743

 Score = 50.1 bits (25), Expect = 0.008
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                            
Query: 389     cggcttctgctaccggtgctgagttaact 417
               ||||||||||||| |||||||||||||||
Sbjct: 8874894 cggcttctgctactggtgctgagttaact 8874866

>dbj|AP004801.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0613F08
          Length = 142937

 Score = 50.1 bits (25), Expect = 0.008
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                          
Query: 389   cggcttctgctaccggtgctgagttaact 417
             ||||||||||||| |||||||||||||||
Sbjct: 79912 cggcttctgctactggtgctgagttaact 79884

>ref|XM_752669.1| Ustilago maydis 521 hypothetical protein (UM01615.1) partial mRNA
          Length = 1710

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 571  gtgctggcttctgcagctggg 591
            |||||||||||||||||||||
Sbjct: 1277 gtgctggcttctgcagctggg 1257

>emb|CT033771.1| Medicago truncatula chromosome 5 clone mth2-15i14, COMPLETE SEQUENCE
          Length = 116146

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 27    agagcagtttctagaaaaaat 47
             |||||||||||||||||||||
Sbjct: 33651 agagcagtttctagaaaaaat 33671

>ref|NM_192321.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1392

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 292 ggcggcgaaggcgaaggagaggcc 315
           ||||| ||||||||||||||||||
Sbjct: 459 ggcggtgaaggcgaaggagaggcc 436

>gb|AE014291.4| Brucella suis 1330 chromosome I, complete sequence
          Length = 2107794

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 514    ggataatttgcaaatggtga 533
              ||||||||||||||||||||
Sbjct: 106487 ggataatttgcaaatggtga 106506

>ref|XM_428325.1| PREDICTED: Gallus gallus similar to Ac1147 (LOC430774), partial
           mRNA
          Length = 1168

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 297 cgaaggcgaaggagaggccggcgg 320
           |||||||| |||||||||||||||
Sbjct: 427 cgaaggcggaggagaggccggcgg 404

>ref|NM_015689.2| Homo sapiens DENN/MADD domain containing 2A (DENND2A), mRNA
          Length = 3737

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 572 tgctggcttctgcagctggg 591
           ||||||||||||||||||||
Sbjct: 473 tgctggcttctgcagctggg 454

>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 292      ggcggcgaaggcgaaggaga 311
                ||||||||||||||||||||
Sbjct: 10931904 ggcggcgaaggcgaaggaga 10931885

>gb|AC174297.11| Medicago truncatula clone mth2-73p24, complete sequence
          Length = 115210

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 3     tttcttatttgaatattgccgcat 26
             ||||||||||||||||| ||||||
Sbjct: 23577 tttcttatttgaatatttccgcat 23554

>ref|XM_381178.1| Gibberella zeae PH-1 chromosome 1 hypothetical protein (FG01002.1)
            partial mRNA
          Length = 1503

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 292  ggcggcgaaggcgaaggaga 311
            ||||||||||||||||||||
Sbjct: 1084 ggcggcgaaggcgaaggaga 1103

>gb|AC122203.4| Mus musculus BAC clone RP23-69J7 from 5, complete sequence
          Length = 269047

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 94    gcctcagtttcttctatagt 113
             ||||||||||||||||||||
Sbjct: 89585 gcctcagtttcttctatagt 89604

>emb|CR733014.1| Gallus gallus finished cDNA, clone ChEST603k21
          Length = 791

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 297 cgaaggcgaaggagaggccggcgg 320
           |||||||| |||||||||||||||
Sbjct: 523 cgaaggcggaggagaggccggcgg 500

>gb|AC073264.5| Homo sapiens BAC clone RP11-298A10 from 7, complete sequence
          Length = 200123

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 571   gtgctggcttctgcagctgg 590
             ||||||||||||||||||||
Sbjct: 46504 gtgctggcttctgcagctgg 46523

>gb|AC146745.20| Medicago truncatula clone mth2-53p19, complete sequence
          Length = 121952

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 3     tttcttatttgaatattgccgcat 26
             ||||||||||||||||| ||||||
Sbjct: 59585 tttcttatttgaatatttccgcat 59608

>gb|BC115004.1| Homo sapiens cDNA clone MGC:131568 IMAGE:7470138, complete cds
          Length = 3762

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 572 tgctggcttctgcagctggg 591
           ||||||||||||||||||||
Sbjct: 383 tgctggcttctgcagctggg 364

>gb|AC134769.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OJ1145F05,
             from chromosome 3, complete sequence
          Length = 127348

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 292   ggcggcgaaggcgaaggaga 311
             ||||||||||||||||||||
Sbjct: 49125 ggcggcgaaggcgaaggaga 49144

>gb|U55211.1|CAU55211 Carassius auratus L1-like cell adhesion molecule antigen E587 mRNA,
           complete cds
          Length = 3801

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 573 gctggcttctgcagctgggg 592
           ||||||||||||||||||||
Sbjct: 644 gctggcttctgcagctgggg 625

>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 292      ggcggcgaaggcgaaggaga 311
                ||||||||||||||||||||
Sbjct: 10930005 ggcggcgaaggcgaaggaga 10929986

>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 292      ggcggcgaaggcgaaggagaggcc 315
                ||||| ||||||||||||||||||
Sbjct: 26028005 ggcggtgaaggcgaaggagaggcc 26028028

>gb|AY826835.1| Heterocapsa triquetra clone HTATPG1 chloroplast ATP synthase gamma
           subunit mRNA, complete cds; nuclear gene for chloroplast
           product
          Length = 1455

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 290 aaggcggcgaaggcgaagga 309
           ||||||||||||||||||||
Sbjct: 892 aaggcggcgaaggcgaagga 911

>gb|AE009618.1| Brucella melitensis 16M chromosome I, section 175 of 195 of the
            complete sequence
          Length = 11869

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 514  ggataatttgcaaatggtga 533
            ||||||||||||||||||||
Sbjct: 5402 ggataatttgcaaatggtga 5383

>dbj|AB033103.2| Homo sapiens mRNA for KIAA1277 protein, partial cds
          Length = 3737

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 572 tgctggcttctgcagctggg 591
           ||||||||||||||||||||
Sbjct: 473 tgctggcttctgcagctggg 454

>dbj|AP002910.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0707D10
          Length = 172003

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 292    ggcggcgaaggcgaaggagaggcc 315
              ||||| ||||||||||||||||||
Sbjct: 124072 ggcggtgaaggcgaaggagaggcc 124095

>dbj|AP003234.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0038D11
          Length = 156465

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 292   ggcggcgaaggcgaaggagaggcc 315
             ||||| ||||||||||||||||||
Sbjct: 31580 ggcggtgaaggcgaaggagaggcc 31603

>gb|AC092081.3| Gallus gallus clone WAG-77D19, complete sequence
          Length = 144092

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 476   aagctggtggggaagggctg 495
             ||||||||||||||||||||
Sbjct: 24983 aagctggtggggaagggctg 25002

>gb|AC092403.4| Gallus gallus clone WAG-100N11, complete sequence
          Length = 144369

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 476    aagctggtggggaagggctg 495
              ||||||||||||||||||||
Sbjct: 133852 aagctggtggggaagggctg 133871

>gb|AC006452.5| Homo sapiens PAC clone RP4-592P3 from 7, complete sequence
          Length = 121705

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 572   tgctggcttctgcagctggg 591
             ||||||||||||||||||||
Sbjct: 40613 tgctggcttctgcagctggg 40632

>gb|AE017223.1| Brucella abortus biovar 1 str. 9-941 chromosome I, complete sequence
          Length = 2124241

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 514    ggataatttgcaaatggtga 533
              ||||||||||||||||||||
Sbjct: 107845 ggataatttgcaaatggtga 107864

>dbj|AK100928.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023135A05, full
           insert sequence
          Length = 1672

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 292 ggcggcgaaggcgaaggagaggcc 315
           ||||| ||||||||||||||||||
Sbjct: 520 ggcggtgaaggcgaaggagaggcc 497

>dbj|AK072469.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023122N01, full
           insert sequence
          Length = 2605

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 292 ggcggcgaaggcgaaggaga 311
           ||||||||||||||||||||
Sbjct: 360 ggcggcgaaggcgaaggaga 341

>emb|CR925738.6| Zebrafish DNA sequence from clone DKEY-164G12 in linkage group 10,
             complete sequence
          Length = 155003

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 1     attttcttatttgaatattg 20
             ||||||||||||||||||||
Sbjct: 36697 attttcttatttgaatattg 36716

>emb|AM040264.1| Brucella melitensis biovar Abortus chromosome I, complete sequence,
              strain 2308
          Length = 2121359

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 514    ggataatttgcaaatggtga 533
              ||||||||||||||||||||
Sbjct: 104213 ggataatttgcaaatggtga 104232


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,250,057
Number of Sequences: 3902068
Number of extensions: 5250057
Number of successful extensions: 91425
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 33
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 91192
Number of HSP's gapped (non-prelim): 233
length of query: 595
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 572
effective length of database: 17,143,297,704
effective search space: 9805966286688
effective search space used: 9805966286688
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)