| Clone Name | rbags26c23 |
|---|---|
| Clone Library Name | barley_pub |
>VPP4_HUMAN (Q9HBG4) Vacuolar proton translocating ATPase 116 kDa subunit a| isoform 4 (V-ATPase 116-kDa isoform a4) (Vacuolar proton translocating ATPase 116 kDa subunit a kidney isoform) Length = 840 Score = 97.8 bits (242), Expect = 2e-20 Identities = 50/83 (60%), Positives = 61/83 (73%), Gaps = 3/83 (3%) Frame = -1 Query: 575 SLAHSELSTVFYDKVL---ILTLGYNNILILAIGVVVFICATVGVLLVMETLSAFLHALR 405 SLAH++LS V + V+ + T G+ I+ + I VF TV +LL+ME LSAFLHALR Sbjct: 748 SLAHAQLSEVLWTMVMNSGLQTRGWGGIVGVFIIFAVFAVLTVAILLIMEGLSAFLHALR 807 Query: 404 LHWVEFQNKFYEGDGYKFAPFSF 336 LHWVEFQNKFY GDGYKF+PFSF Sbjct: 808 LHWVEFQNKFYVGDGYKFSPFSF 830
>VPP4_MOUSE (Q920R6) Vacuolar proton translocating ATPase 116 kDa subunit a| isoform 4 (V-ATPase 116-kDa isoform a4) (Vacuolar proton translocating ATPase 116 kDa subunit a kidney isoform) Length = 833 Score = 93.6 bits (231), Expect = 4e-19 Identities = 50/83 (60%), Positives = 60/83 (72%), Gaps = 3/83 (3%) Frame = -1 Query: 575 SLAHSELSTVFYDKVLILTL---GYNNILILAIGVVVFICATVGVLLVMETLSAFLHALR 405 SLAH+ELS V + V+ + L G+ ++ + I VF TV +LLVME LSAFLHALR Sbjct: 741 SLAHAELSEVLWTMVMSIGLRLQGWAGLVGVFIIFAVFAVLTVAILLVMEGLSAFLHALR 800 Query: 404 LHWVEFQNKFYEGDGYKFAPFSF 336 LHWVEFQNKFYEG G KF+PFSF Sbjct: 801 LHWVEFQNKFYEGAGSKFSPFSF 823
>VPP3_HUMAN (Q13488) Vacuolar proton translocating ATPase 116 kDa subunit a| isoform 3 (V-ATPase 116-kDa isoform a3) (Osteoclastic proton pump 116 kDa subunit) (OC-116 kDa) (OC116) (T-cell immune regulator 1) (T cell immune response cDNA7 protein) (TIRC7) Length = 830 Score = 91.7 bits (226), Expect = 1e-18 Identities = 49/86 (56%), Positives = 60/86 (69%), Gaps = 5/86 (5%) Frame = -1 Query: 575 SLAHSELSTVFYDKVLILTLGYNNILILAIGVVV-----FICATVGVLLVMETLSAFLHA 411 SLAH++LS V + V+ + LG + +A V+V F TV +LLVME LSAFLHA Sbjct: 741 SLAHAQLSEVLWAMVMRIGLGLGREVGVAAVVLVPIFAAFAVMTVAILLVMEGLSAFLHA 800 Query: 410 LRLHWVEFQNKFYEGDGYKFAPFSFA 333 LRLHWVEFQNKFY G GYK +PF+FA Sbjct: 801 LRLHWVEFQNKFYSGTGYKLSPFTFA 826
>VPP1_PONPY (Q5R422) Vacuolar proton translocating ATPase 116 kDa subunit a| isoform 1 (V-ATPase 116-kDa isoform a1) Length = 837 Score = 91.3 bits (225), Expect = 2e-18 Identities = 46/83 (55%), Positives = 57/83 (68%), Gaps = 3/83 (3%) Frame = -1 Query: 575 SLAHSELSTVFYDKVLILTLGYNNI---LILAIGVVVFICATVGVLLVMETLSAFLHALR 405 SLAH++LS V + V+ + L ++ L+L F TV +LL+ME LSAFLHALR Sbjct: 745 SLAHAQLSEVLWTMVIHIGLSVKSLAGGLVLFFFFTAFATLTVAILLIMEGLSAFLHALR 804 Query: 404 LHWVEFQNKFYEGDGYKFAPFSF 336 LHWVEFQNKFY G G+KF PFSF Sbjct: 805 LHWVEFQNKFYSGTGFKFLPFSF 827
>VPP1_HUMAN (Q93050) Vacuolar proton translocating ATPase 116 kDa subunit a| isoform 1 (V-ATPase 116-kDa isoform a1) (Clathrin-coated vesicle/synaptic vesicle proton pump 116 kDa subunit) (Vacuolar proton pump subunit 1) (Vacuolar adenosine triphosphatase Length = 837 Score = 91.3 bits (225), Expect = 2e-18 Identities = 46/83 (55%), Positives = 57/83 (68%), Gaps = 3/83 (3%) Frame = -1 Query: 575 SLAHSELSTVFYDKVLILTLGYNNI---LILAIGVVVFICATVGVLLVMETLSAFLHALR 405 SLAH++LS V + V+ + L ++ L+L F TV +LL+ME LSAFLHALR Sbjct: 745 SLAHAQLSEVLWTMVIHIGLSVKSLAGGLVLFFFFTAFATLTVAILLIMEGLSAFLHALR 804 Query: 404 LHWVEFQNKFYEGDGYKFAPFSF 336 LHWVEFQNKFY G G+KF PFSF Sbjct: 805 LHWVEFQNKFYSGTGFKFLPFSF 827
>VPP1_BOVIN (Q29466) Vacuolar proton translocating ATPase 116 kDa subunit a| isoform 1 (V-ATPase 116-kDa isoform a1) (Clathrin-coated vesicle/synaptic vesicle proton pump 116 kDa subunit) (Vacuolar proton pump subunit 1) (Vacuolar adenosine triphosphatase Length = 838 Score = 88.6 bits (218), Expect = 1e-17 Identities = 46/83 (55%), Positives = 56/83 (67%), Gaps = 3/83 (3%) Frame = -1 Query: 575 SLAHSELSTVFYDKVLILTLGYNNI---LILAIGVVVFICATVGVLLVMETLSAFLHALR 405 SLAH++LS V + V+ + L ++ L L F TV +LL+ME LSAFLHALR Sbjct: 746 SLAHAQLSEVLWTMVIHIGLKVKSLAGGLALFFIFAAFATLTVAILLIMEGLSAFLHALR 805 Query: 404 LHWVEFQNKFYEGDGYKFAPFSF 336 LHWVEFQNKFY G G+KF PFSF Sbjct: 806 LHWVEFQNKFYSGTGFKFLPFSF 828
>VPP1_MOUSE (Q9Z1G4) Vacuolar proton translocating ATPase 116 kDa subunit a| isoform 1 (V-ATPase 116-kDa isoform a1) (Clathrin-coated vesicle/synaptic vesicle proton pump 116 kDa subunit) (Vacuolar proton pump subunit 1) (Vacuolar adenosine triphosphatase Length = 839 Score = 87.0 bits (214), Expect = 3e-17 Identities = 46/83 (55%), Positives = 56/83 (67%), Gaps = 3/83 (3%) Frame = -1 Query: 575 SLAHSELSTVFYDKVLILTLGYNNI---LILAIGVVVFICATVGVLLVMETLSAFLHALR 405 SLAH++LS V + V+ + L ++ L L F TV +LL+ME LSAFLHALR Sbjct: 747 SLAHAQLSEVLWTMVIHIGLHVRSLAGGLGLFFIFAAFATLTVAILLIMEGLSAFLHALR 806 Query: 404 LHWVEFQNKFYEGDGYKFAPFSF 336 LHWVEFQNKFY G G+KF PFSF Sbjct: 807 LHWVEFQNKFYTGTGFKFLPFSF 829
>VPP1_RAT (P25286) Vacuolar proton translocating ATPase 116 kDa subunit a| isoform 1 (V-ATPase 116-kDa isoform a1) (Clathrin-coated vesicle/synaptic vesicle proton pump 116 kDa subunit) (Vacuolar proton pump subunit 1) (Vacuolar adenosine triphosphatase su Length = 838 Score = 87.0 bits (214), Expect = 3e-17 Identities = 46/83 (55%), Positives = 56/83 (67%), Gaps = 3/83 (3%) Frame = -1 Query: 575 SLAHSELSTVFYDKVLILTLGYNNI---LILAIGVVVFICATVGVLLVMETLSAFLHALR 405 SLAH++LS V + V+ + L ++ L L F TV +LL+ME LSAFLHALR Sbjct: 746 SLAHAQLSEVLWTMVIHIGLHVRSLAGGLGLFFIFAAFATLTVAILLIMEGLSAFLHALR 805 Query: 404 LHWVEFQNKFYEGDGYKFAPFSF 336 LHWVEFQNKFY G G+KF PFSF Sbjct: 806 LHWVEFQNKFYTGTGFKFLPFSF 828
>VPP2_HUMAN (Q9Y487) Vacuolar proton translocating ATPase 116 kDa subunit a| isoform 2 (V-ATPase 116-kDa isoform a2) (TJ6) Length = 856 Score = 86.7 bits (213), Expect = 4e-17 Identities = 44/85 (51%), Positives = 60/85 (70%), Gaps = 3/85 (3%) Frame = -1 Query: 575 SLAHSELSTVFYDKVLILTLGYNN---ILILAIGVVVFICATVGVLLVMETLSAFLHALR 405 SLAH++LS V + ++ + L + +L+L + +F T+ +LL+ME LSAFLHA+R Sbjct: 760 SLAHAQLSDVLWAMLMRVGLRVDTTYGVLLLLPVIALFAVLTIFILLIMEGLSAFLHAIR 819 Query: 404 LHWVEFQNKFYEGDGYKFAPFSFAL 330 LHWVEFQNKFY G G KF PFSF+L Sbjct: 820 LHWVEFQNKFYVGAGTKFVPFSFSL 844
>VPP2_BOVIN (O97681) Vacuolar proton translocating ATPase 116 kDa subunit A| isoform 2 (V-ATPase 116-kDa isoform a2) Length = 854 Score = 85.5 bits (210), Expect = 1e-16 Identities = 44/85 (51%), Positives = 58/85 (68%), Gaps = 3/85 (3%) Frame = -1 Query: 575 SLAHSELSTVFYDKVLILTLGYNN---ILILAIGVVVFICATVGVLLVMETLSAFLHALR 405 SLAH++LS V + ++ + L + +L+L + F T+ +LL+ME LSAFLHA+R Sbjct: 760 SLAHAQLSEVLWAMLMHVGLRVDTAYGVLVLLPVIAFFAVLTIFILLIMEGLSAFLHAIR 819 Query: 404 LHWVEFQNKFYEGDGYKFAPFSFAL 330 LHWVEFQNKFY G G KF PFSF L Sbjct: 820 LHWVEFQNKFYVGAGTKFVPFSFRL 844
>VPP2_MOUSE (P15920) Vacuolar proton translocating ATPase 116 kDa subunit a| isoform 2 (V-ATPase 116-kDa isoform a2) (Immune suppressor factor J6B7) Length = 856 Score = 85.5 bits (210), Expect = 1e-16 Identities = 45/85 (52%), Positives = 59/85 (69%), Gaps = 3/85 (3%) Frame = -1 Query: 575 SLAHSELSTVFYDKVLILTLGYNN---ILILAIGVVVFICATVGVLLVMETLSAFLHALR 405 SLAH++LS V + ++ + L + +L+L + F T+ +LLVME LSAFLHA+R Sbjct: 760 SLAHAQLSDVLWAMLMRVGLRVDTTYGVLLLLPVMAFFAVLTIFILLVMEGLSAFLHAIR 819 Query: 404 LHWVEFQNKFYEGDGYKFAPFSFAL 330 LHWVEFQNKFY G G KF PFSF+L Sbjct: 820 LHWVEFQNKFYVGAGTKFVPFSFSL 844
>VPP1_CAEEL (P30628) Probable vacuolar proton translocating ATPase 116 kDa| subunit a (Uncoordinated protein 32) Length = 905 Score = 82.4 bits (202), Expect = 8e-16 Identities = 44/83 (53%), Positives = 56/83 (67%), Gaps = 3/83 (3%) Frame = -1 Query: 575 SLAHSELSTVFYDKVL---ILTLGYNNILILAIGVVVFICATVGVLLVMETLSAFLHALR 405 SLAH++LS V + V + GY + I +F +V +L++ME LSAFLHALR Sbjct: 809 SLAHAQLSDVLWTMVFRNAFVLDGYTGAIATYILFFIFGSLSVFILVLMEGLSAFLHALR 868 Query: 404 LHWVEFQNKFYEGDGYKFAPFSF 336 LHWVEFQ+KFY G GY+FAPFSF Sbjct: 869 LHWVEFQSKFYGGLGYEFAPFSF 891
>STV1_YEAST (P37296) Vacuolar ATP synthase subunit a, Golgi isoform (EC 3.6.3.14)| (V-ATPase 101 kDa subunit) (V-ATPase subunit AC115) (Similar to VPH1 protein 1) Length = 890 Score = 74.3 bits (181), Expect = 2e-13 Identities = 42/86 (48%), Positives = 55/86 (63%), Gaps = 6/86 (6%) Frame = -1 Query: 575 SLAHSELSTVFYDKVLILTLGYNNI-LILAIGVVVFICA-----TVGVLLVMETLSAFLH 414 SLAH++LS+V +D + N LA+ VVF+ A TV +L+ ME SA LH Sbjct: 800 SLAHAQLSSVLWDMTISNAFSSKNSGSPLAVMKVVFLFAMWFVLTVCILVFMEGTSAMLH 859 Query: 413 ALRLHWVEFQNKFYEGDGYKFAPFSF 336 ALRLHWVE +KF+EG+GY + PFSF Sbjct: 860 ALRLHWVEAMSKFFEGEGYAYEPFSF 885
>VPH1_SCHPO (O13742) Probable vacuolar ATP synthase 91 kDa subunit (Vacuolar| ATPase 91 kDa subunit) Length = 805 Score = 68.6 bits (166), Expect = 1e-11 Identities = 37/83 (44%), Positives = 51/83 (61%), Gaps = 3/83 (3%) Frame = -1 Query: 575 SLAHSELSTVFYDKVLILTLGYNNILILAIGVVVF---ICATVGVLLVMETLSAFLHALR 405 SLAH++LS+V ++ L I+ V++F AT VL+ ME SA LH+LR Sbjct: 718 SLAHNQLSSVLWNMTLANGFRMTGIVGSIFVVILFGFWFIATCVVLVAMEGTSAMLHSLR 777 Query: 404 LHWVEFQNKFYEGDGYKFAPFSF 336 LHWVE +K +EG+GY F PF+F Sbjct: 778 LHWVEGMSKHFEGEGYAFTPFTF 800
>VPH1_YEAST (P32563) Vacuolar ATP synthase subunit a, vacuolar isoform (EC| 3.6.3.14) (V-ATPase a subunit) (Vacuolar proton pump a subunit) (V-ATPase 95 kDa subunit) (Vacuolar pH protein 1) Length = 839 Score = 68.2 bits (165), Expect = 2e-11 Identities = 33/83 (39%), Positives = 52/83 (62%), Gaps = 3/83 (3%) Frame = -1 Query: 575 SLAHSELSTVFYDKVLILTLGYNNILILAIGVVVF---ICATVGVLLVMETLSAFLHALR 405 SLAH++LS+V + + + G+ + + + V +F T VL++ME SA LH+LR Sbjct: 739 SLAHAQLSSVLWTMTIQIAFGFRGFVGVFMTVALFAMWFALTCAVLVLMEGTSAMLHSLR 798 Query: 404 LHWVEFQNKFYEGDGYKFAPFSF 336 LHWVE +KF+ G+G + PF+F Sbjct: 799 LHWVESMSKFFVGEGLPYEPFAF 821
>VPH1_NEUCR (Q01290) Vacuolar ATP synthase 98 kDa subunit (Vacuolar ATPase 98 kDa| subunit) Length = 856 Score = 65.1 bits (157), Expect = 1e-10 Identities = 34/83 (40%), Positives = 48/83 (57%), Gaps = 3/83 (3%) Frame = -1 Query: 575 SLAHSELSTVFYDKVLILTL---GYNNILILAIGVVVFICATVGVLLVMETLSAFLHALR 405 SLAH +LS V + + L G + L + +F +V +L++ME +SA LH+LR Sbjct: 759 SLAHQQLSAVLWSMTMAKALESKGLGGAIFLVVAFAMFFVLSVIILIIMEGVSAMLHSLR 818 Query: 404 LHWVEFQNKFYEGDGYKFAPFSF 336 L WVE +KF E G+ F PFSF Sbjct: 819 LAWVESFSKFAEFGGWPFTPFSF 841
>VATI_METJA (Q57675) V-type ATP synthase subunit I (EC 3.6.3.14) (V-type ATPase| subunit I) Length = 695 Score = 52.4 bits (124), Expect = 9e-07 Identities = 29/55 (52%), Positives = 37/55 (67%), Gaps = 3/55 (5%) Frame = -1 Query: 497 ILAIGVVV-FICATVGVLL--VMETLSAFLHALRLHWVEFQNKFYEGDGYKFAPF 342 I IG++V I VG VM L AF+H+LRLH+VEF ++FYEG G KF+PF Sbjct: 632 IPVIGIIVAIIILLVGHTFNFVMNGLGAFIHSLRLHYVEFFSQFYEGGGKKFSPF 686
>VATI_PYRAB (Q9UXU2) V-type ATP synthase subunit I (EC 3.6.3.14) (V-type ATPase| subunit I) Length = 659 Score = 50.1 bits (118), Expect = 5e-06 Identities = 24/52 (46%), Positives = 33/52 (63%) Frame = -1 Query: 494 LAIGVVVFICATVGVLLVMETLSAFLHALRLHWVEFQNKFYEGDGYKFAPFS 339 + IG+V+ I + + L AF+HALRLH+VEF FY G+G KF PF+ Sbjct: 597 ILIGIVILIGGHI-FSTAINALGAFVHALRLHYVEFFGTFYSGEGRKFEPFA 647
>VATI_AERPE (Q9YEA0) V-type ATP synthase subunit I (EC 3.6.3.14) (V-type ATPase| subunit I) Length = 686 Score = 50.1 bits (118), Expect = 5e-06 Identities = 29/77 (37%), Positives = 43/77 (55%) Frame = -1 Query: 575 SLAHSELSTVFYDKVLILTLGYNNILILAIGVVVFICATVGVLLVMETLSAFLHALRLHW 396 +LAHS L V Y +++ G IL +G ++++ + V ME L AF HA RLH+ Sbjct: 598 ALAHSSLMFVIYYLTVMIMQG--GILADVVGALLYVGGNLAVA-AMEGLLAFAHASRLHF 654 Query: 395 VEFQNKFYEGDGYKFAP 345 E+ +KFY G G + P Sbjct: 655 YEWFSKFYSGTGVPYTP 671
>VATI_HALSA (Q9HND8) V-type ATP synthase subunit I (EC 3.6.3.14) (V-type ATPase| subunit I) Length = 722 Score = 49.3 bits (116), Expect = 8e-06 Identities = 26/56 (46%), Positives = 35/56 (62%) Frame = -1 Query: 494 LAIGVVVFICATVGVLLVMETLSAFLHALRLHWVEFQNKFYEGDGYKFAPFSFALN 327 + IGV+V + ++L + SA L ALRL +VEF NKFYEG G K+ PF + N Sbjct: 663 ILIGVLVLLVGHA-LVLALGVTSAGLQALRLEYVEFFNKFYEGGGEKYNPFGYTRN 717
>VATI_PYRHO (O57721) V-type ATP synthase subunit I (EC 3.6.3.14) (V-type ATPase| subunit I) Length = 659 Score = 49.3 bits (116), Expect = 8e-06 Identities = 29/82 (35%), Positives = 46/82 (56%), Gaps = 3/82 (3%) Frame = -1 Query: 575 SLAHSELSTVFYDKVLILTLGYNNILILAIGVVVFICATVGVLL---VMETLSAFLHALR 405 +LA S ++ V +L+ + I + +G ++ I +G + + L AF+HALR Sbjct: 568 ALATSGIALVI--NILVEMIWGIKIASVPLGALIGILVLIGGHIFSTAINALGAFVHALR 625 Query: 404 LHWVEFQNKFYEGDGYKFAPFS 339 LH+VEF FY G+G KF PF+ Sbjct: 626 LHYVEFFGTFYSGEGRKFEPFA 647
>VATI_METMA (O59659) V-type ATP synthase subunit I (EC 3.6.3.14) (V-type ATPase| subunit I) Length = 649 Score = 48.1 bits (113), Expect = 2e-05 Identities = 23/59 (38%), Positives = 34/59 (57%) Frame = -1 Query: 512 YNNILILAIGVVVFICATVGVLLVMETLSAFLHALRLHWVEFQNKFYEGDGYKFAPFSF 336 ++ I AI ++ G+ ++ ++ LHALRL +VEF KFYEG G KF PF + Sbjct: 584 HSQIGAAAIAAIIVFILGHGLNTILSIIAPGLHALRLQYVEFFGKFYEGGGRKFNPFGY 642
>VATI_PYRKO (Q5JDS2) V-type ATP synthase subunit I (EC 3.6.3.14) (V-type ATPase| subunit I) Length = 663 Score = 47.4 bits (111), Expect = 3e-05 Identities = 22/49 (44%), Positives = 31/49 (63%) Frame = -1 Query: 488 IGVVVFICATVGVLLVMETLSAFLHALRLHWVEFQNKFYEGDGYKFAPF 342 IG+++F + + L AF+HALRLH+VEF FY G+G +F PF Sbjct: 603 IGLIIFFGGQL-FSTAINALGAFVHALRLHYVEFFGTFYSGEGKRFEPF 650
>VATI_ARCFU (O29106) V-type ATP synthase subunit I (EC 3.6.3.14) (V-type ATPase| subunit I) Length = 676 Score = 42.7 bits (99), Expect = 7e-04 Identities = 23/54 (42%), Positives = 32/54 (59%) Frame = -1 Query: 503 ILILAIGVVVFICATVGVLLVMETLSAFLHALRLHWVEFQNKFYEGDGYKFAPF 342 I I +G +V + VG L ++ L L +LRLH+VEF KF+EG G + PF Sbjct: 615 ISIPIVGAIVLLIGHVGNL-ILGILDPGLQSLRLHYVEFFTKFFEGGGRLYEPF 667
>VATI_SULSO (Q9UWW3) V-type ATP synthase subunit I (EC 3.6.3.14) (V-type ATPase| subunit I) Length = 701 Score = 41.6 bits (96), Expect = 0.002 Identities = 21/53 (39%), Positives = 32/53 (60%) Frame = -1 Query: 503 ILILAIGVVVFICATVGVLLVMETLSAFLHALRLHWVEFQNKFYEGDGYKFAP 345 +LI I +++ I + + + +E L F+ LRLH+ E +KFYEG G KF P Sbjct: 642 VLINPIAIIILIIGNL-LAIGLEGLVVFIQDLRLHFYEMFSKFYEGRGRKFEP 693
>NTPI_ENTHR (P43439) V-type sodium ATP synthase subunit I (EC 3.6.3.15)| (Na(+)-translocating ATPase subunit I) Length = 664 Score = 38.9 bits (89), Expect = 0.011 Identities = 20/48 (41%), Positives = 27/48 (56%), Gaps = 9/48 (18%) Frame = -1 Query: 461 TVGVLLV---------METLSAFLHALRLHWVEFQNKFYEGDGYKFAP 345 +VG+LL+ + LSA++H RL +VEF KFY G G F P Sbjct: 602 SVGILLIIVLQALNMFLTLLSAYVHGARLQYVEFFGKFYTGGGRSFKP 649
>VATI_METTH (O27041) V-type ATP synthase subunit I (EC 3.6.3.14) (V-type ATPase| subunit I) Length = 658 Score = 36.6 bits (83), Expect = 0.053 Identities = 28/67 (41%), Positives = 39/67 (58%), Gaps = 3/67 (4%) Frame = -1 Query: 533 VLILTLGYNNILILAIGVVVF-ICATVGVLL--VMETLSAFLHALRLHWVEFQNKFYEGD 363 V ILT G + +I IGVV+ I G + ++L AF+++LRLH+VEF +FY G Sbjct: 582 VNILT-GLSYEMIPVIGVVLAPIIFVFGHIANNAFQSLGAFINSLRLHYVEFFAQFYMGG 640 Query: 362 GYKFAPF 342 KF F Sbjct: 641 KNKFNAF 647
>VATI_THEAC (Q9HM61) V-type ATP synthase subunit I (EC 3.6.3.14) (V-type ATPase| subunit I) Length = 637 Score = 35.8 bits (81), Expect = 0.090 Identities = 21/66 (31%), Positives = 35/66 (53%) Frame = -1 Query: 539 DKVLILTLGYNNILILAIGVVVFICATVGVLLVMETLSAFLHALRLHWVEFQNKFYEGDG 360 D V + ++ ++I + GVV+ I + L++ + RL +VEF +KFY G+G Sbjct: 556 DLVFMKSIVSHSIGLAIAGVVILIFGQM-FNLILAVFEPGIQGARLIYVEFFSKFYHGNG 614 Query: 359 YKFAPF 342 F PF Sbjct: 615 RMFRPF 620
>RAD5_USTMA (Q4PGG5) DNA repair protein RAD5 (EC 3.6.1.-)| Length = 1387 Score = 29.3 bits (64), Expect = 8.4 Identities = 13/45 (28%), Positives = 20/45 (44%), Gaps = 7/45 (15%) Frame = -3 Query: 510 QQHFNPCYWCRCLHLRYCRCVACY-------GDPKCIPSCLEAPL 397 + +PCY RC+H C+ Y GD P+C + P+ Sbjct: 1114 ESQISPCYLPRCMHSACKACLVDYLGQCKQKGDQGACPTCRKGPV 1158 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 86,001,795 Number of Sequences: 219361 Number of extensions: 1775807 Number of successful extensions: 4805 Number of sequences better than 10.0: 29 Number of HSP's better than 10.0 without gapping: 4553 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4802 length of database: 80,573,946 effective HSP length: 106 effective length of database: 57,321,680 effective search space used: 4872342800 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)