| Clone Name | rbags25n22 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 42.1 bits (21), Expect = 1.4 Identities = 42/49 (85%) Strand = Plus / Minus Query: 148 actttggcagaacggaatgcacaaaaactggacaccactagatggaaac 196 |||| ||||||| || ||||||||||| ||||| |||| ||||||||| Sbjct: 21696272 acttgggcagaatgggatgcacaaaaatgggacagcactggatggaaac 21696224
>dbj|AK100857.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023123M01, full insert sequence Length = 2021 Score = 42.1 bits (21), Expect = 1.4 Identities = 42/49 (85%) Strand = Plus / Minus Query: 148 actttggcagaacggaatgcacaaaaactggacaccactagatggaaac 196 |||| ||||||| || ||||||||||| ||||| |||| ||||||||| Sbjct: 1827 acttgggcagaatgggatgcacaaaaatgggacagcactggatggaaac 1779
>emb|AL606592.2|OSJN00024 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0006B20, complete sequence Length = 141915 Score = 42.1 bits (21), Expect = 1.4 Identities = 42/49 (85%) Strand = Plus / Minus Query: 148 actttggcagaacggaatgcacaaaaactggacaccactagatggaaac 196 |||| ||||||| || ||||||||||| ||||| |||| ||||||||| Sbjct: 7889 acttgggcagaatgggatgcacaaaaatgggacagcactggatggaaac 7841
>ref|NM_129003.3| Arabidopsis thaliana unknown protein AT2G34510 mRNA, complete cds Length = 1398 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 8 gaagctaccgaaacattcag 27 |||||||||||||||||||| Sbjct: 494 gaagctaccgaaacattcag 475
>gb|AC000057.1| Homo sapiens BAC clone CTB-67M9 from 7, complete sequence Length = 78631 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 131 ttcctctcctggaaagtactttgg 154 ||||||||||||||||| |||||| Sbjct: 58058 ttcctctcctggaaagtgctttgg 58081
>gb|AC004077.3| Arabidopsis thaliana chromosome 2 clone T31E10 map ve016, complete sequence Length = 93060 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 8 gaagctaccgaaacattcag 27 |||||||||||||||||||| Sbjct: 58715 gaagctaccgaaacattcag 58696
>gb|AF325081.1|AF325081 Arabidopsis thaliana unknown protein (At2g34510) mRNA, complete cds Length = 1206 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 8 gaagctaccgaaacattcag 27 |||||||||||||||||||| Sbjct: 419 gaagctaccgaaacattcag 400
>emb|BX820463.1|CNS0A9JU Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH37ZC06 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 896 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 8 gaagctaccgaaacattcag 27 |||||||||||||||||||| Sbjct: 419 gaagctaccgaaacattcag 400
>emb|BX819750.1|CNS0A9H2 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS22ZC04 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1393 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 8 gaagctaccgaaacattcag 27 |||||||||||||||||||| Sbjct: 493 gaagctaccgaaacattcag 474 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,430,058 Number of Sequences: 3902068 Number of extensions: 2430058 Number of successful extensions: 42453 Number of sequences better than 10.0: 9 Number of HSP's better than 10.0 without gapping: 9 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 42425 Number of HSP's gapped (non-prelim): 28 length of query: 417 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 395 effective length of database: 17,147,199,772 effective search space: 6773143909940 effective search space used: 6773143909940 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)