ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags25n18
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AY109746.1| Zea mays CL5211_1 mRNA sequence 115 2e-22
2gb|AY105976.1| Zea mays PCO064179 mRNA sequence 98 4e-17
3gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 96 2e-16
4gb|DQ083179.1| Oryza sativa (indica cultivar-group) clone 2S7G49... 96 2e-16
5dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 96 2e-16
6dbj|AK066916.1| Oryza sativa (japonica cultivar-group) cDNA clon... 96 2e-16
7gb|AC118672.3| Genomic sequence for Oryza sativa, Nipponbare str... 96 2e-16
8gb|AC097447.4| Oryza sativa (japonica cultivar-group) chromosome... 48 0.033
9dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 48 0.033
10dbj|AK064809.1| Oryza sativa (japonica cultivar-group) cDNA clon... 48 0.033
11gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 48 0.033
12gb|AC174464.1| Oryza sativa (japonica cultivar-group) chromosome... 48 0.033
13emb|AJ867256.1| Oncorhynchus mykiss IL11 gene for interleukin-11... 42 2.0
14gb|AC186558.1| Gasterosteus aculeatus clone VMRC26-150D01, compl... 40 8.1
15ref|XM_958350.1| Neurospora crassa OR74A hypothetical protein ( ... 40 8.1
16ref|XM_325306.1| Neurospora crassa OR74A hypothetical protein ( ... 40 8.1
17ref|XM_542723.2| PREDICTED: Canis familiaris similar to Ectonucl... 40 8.1
18gb|AC126272.3| Mus musculus BAC clone RP23-48P22 from chromosome... 40 8.1
19emb|AL353607.20| Human DNA sequence from clone RP11-652B19 on ch... 40 8.1
20ref|XM_782110.1| PREDICTED: Strongylocentrotus purpuratus simila... 40 8.1
21ref|XM_782066.1| PREDICTED: Strongylocentrotus purpuratus simila... 40 8.1
22emb|CR524821.5| Zebrafish DNA sequence from clone CH211-192F15 i... 40 8.1
23emb|AL355933.1|NCB8B20 Neurospora crassa DNA linkage group II BA... 40 8.1
24gb|AC083807.17| Homo sapiens 12 BAC RP11-775A14 (Roswell Park Ca... 40 8.1
25dbj|AK128149.1| Homo sapiens cDNA FLJ46272 fis, clone TESTI4028692 40 8.1
26ref|XM_692291.1| PREDICTED: Danio rerio similar to MYST histone ... 40 8.1
27ref|NM_058529.2| Caenorhabditis elegans Y37E3.10 (Y37E3.10) mRNA... 40 8.1
28gb|AC007603.5| Homo sapiens chromosome 16 clone RP11-305A4, comp... 40 8.1
29gb|AC084676.1|CBRG47J19 Caenorhabditis briggsae cosmid G47J19, c... 40 8.1
30emb|BX322657.13| Zebrafish DNA sequence from clone DKEYP-53D3 in... 40 8.1
31gb|AC087079.1| Caenorhabditis elegans cosmid Y37E3, complete seq... 40 8.1
32emb|AL929334.12| Zebrafish DNA sequence from clone DKEY-24F15, c... 40 8.1
33gb|AC134585.6| Mus musculus BAC clone RP23-302F9 from 8, complet... 40 8.1
34gb|AC138460.4| Mus musculus BAC clone RP23-295A7 from 8, complet... 40 8.1 
>gb|AY109746.1| Zea mays CL5211_1 mRNA sequence
          Length = 935

 Score =  115 bits (58), Expect = 2e-22
 Identities = 204/252 (80%), Gaps = 3/252 (1%)
 Strand = Plus / Plus

                                                                       
Query: 304 ttcactctttgcccttggcgaagaaccgactaaagccccggctttgtttctcgggcaact 363
           |||||||||||  ||| || ||||||||||| || || ||||| ||||| || |||||||
Sbjct: 337 ttcactctttggtcttcgcaaagaaccgactgaatcctcggctctgtttgtctggcaact 396

                                                                       
Query: 364 ggt---tagcaaacgaggaagaggatgaggatcgcgacctatgctttgggcgcttggaac 420
           |||   | |  || || ||||| || ||||||| ||| | |||||| ||||||||||| |
Sbjct: 397 ggtggttggtgaatgacgaagacgaagaggatctcgatcgatgcttcgggcgcttggagc 456

                                                                       
Query: 421 tgttcattgaaagggaagggcttccgtccacatcagaaggggtcatatgggtcttgtatc 480
           |||||   |||||| |||||||||||||  ||||||||||| |||| || ||||||||||
Sbjct: 457 tgttcggagaaaggaaagggcttccgtctgcatcagaagggatcatgtgtgtcttgtatc 516

                                                                       
Query: 481 cgttgaggggagacacattccctgactccagcatttcctggtctgtatcatgatggccag 540
           | ||||  ||||| ||||| |||| | | ||||| ||||||||||||||| | ||||| |
Sbjct: 517 cattgaccggagagacatttcctgtcccaagcatatcctggtctgtatcaggttggcctg 576

                       
Query: 541 atggtttctggg 552
           | || |||||||
Sbjct: 577 aaggcttctggg 588
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>gb|AY105976.1| Zea mays PCO064179 mRNA sequence
          Length = 1469

 Score = 97.6 bits (49), Expect = 4e-17
 Identities = 201/251 (80%), Gaps = 3/251 (1%)
 Strand = Plus / Minus

                                                                        
Query: 304  ttcactctttgcccttggcgaagaaccgactaaagccccggctttgtttctcgggcaact 363
            |||||||||||| ||| |||||||||||||| || || ||| | ||||| || |||||||
Sbjct: 1353 ttcactctttgctcttcgcgaagaaccgactgaatcctcggttctgtttgtctggcaact 1294

                                                                        
Query: 364  ggt---tagcaaacgaggaagaggatgaggatcgcgacctatgctttgggcgcttggaac 420
            |||   | |  || |||||||| || ||||||| ||| | |||||| |||||||||||  
Sbjct: 1293 ggtggttggtgaatgaggaagacgaagaggatctcgatcgatgcttcgggcgcttggagg 1234

                                                                        
Query: 421  tgttcattgaaagggaagggcttccgtccacatcagaaggggtcatatgggtcttgtatc 480
            ||||    ||| || |||||||  ||||| ||||||||||| |||| || |||||||| |
Sbjct: 1233 tgtttggagaagggaaagggctaacgtccgcatcagaagggatcatgtgtgtcttgtacc 1174

                                                                        
Query: 481  cgttgaggggagacacattccctgactccagcatttcctggtctgtatcatgatggccag 540
            |  |||  ||||||||||| |||| | | ||||| ||||||||||||||| | ||||| |
Sbjct: 1173 cactgatcggagacacatttcctgtcccaagcatatcctggtctgtatcaggttggcctg 1114

                       
Query: 541  atggtttctgg 551
            | |||||||||
Sbjct: 1113 aaggtttctgg 1103
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 95.6 bits (48), Expect = 2e-16
 Identities = 122/147 (82%), Gaps = 6/147 (4%)
 Strand = Plus / Minus

                                                                           
Query: 316     ccttggcgaagaaccgactaaagccccggctttgtttctcgggcaactggttagcaaacg 375
               ||||||||||||||||||| || |||||| |||||||||||||||| ||||||| ||  |
Sbjct: 7718525 ccttggcgaagaaccgactgaaaccccggttttgtttctcgggcaattggttagaaattg 7718466

                                                                           
Query: 376     aggaagaggatgaggatcgcgacctatgctttgggcgcttggaactgttcattgaaaggg 435
               |||||      || |||| ||| |||||||||||||||||||| | |||   ||||||| 
Sbjct: 7718465 aggaa------gatgatctcgatctatgctttgggcgcttggatccgtttggtgaaagga 7718412

                                          
Query: 436     aagggcttccgtccacatcagaagggg 462
               |||||||||||||| | ||||| ||||
Sbjct: 7718411 aagggcttccgtccgcttcagaggggg 7718385
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>gb|DQ083179.1| Oryza sativa (indica cultivar-group) clone 2S7G49 mRNA sequence
          Length = 522

 Score = 95.6 bits (48), Expect = 2e-16
 Identities = 122/147 (82%), Gaps = 6/147 (4%)
 Strand = Plus / Minus

                                                                       
Query: 316 ccttggcgaagaaccgactaaagccccggctttgtttctcgggcaactggttagcaaacg 375
           ||||||||||||||||||| || |||||| |||||||||||||||| ||||||| ||  |
Sbjct: 250 ccttggcgaagaaccgactgaaaccccggttttgtttctcgggcaattggttagaaattg 191

                                                                       
Query: 376 aggaagaggatgaggatcgcgacctatgctttgggcgcttggaactgttcattgaaaggg 435
           |||||      || |||| ||| |||||||||||||||||||| | |||   ||||||| 
Sbjct: 190 aggaa------gatgatctcgatctatgctttgggcgcttggatccgtttggtgaaagga 137

                                      
Query: 436 aagggcttccgtccacatcagaagggg 462
           |||||||||||||| | ||||| ||||
Sbjct: 136 aagggcttccgtccgcttcagaggggg 110
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
               sequence
          Length = 36192742

 Score = 95.6 bits (48), Expect = 2e-16
 Identities = 122/147 (82%), Gaps = 6/147 (4%)
 Strand = Plus / Minus

                                                                           
Query: 316     ccttggcgaagaaccgactaaagccccggctttgtttctcgggcaactggttagcaaacg 375
               ||||||||||||||||||| || |||||| |||||||||||||||| ||||||| ||  |
Sbjct: 7716360 ccttggcgaagaaccgactgaaaccccggttttgtttctcgggcaattggttagaaattg 7716301

                                                                           
Query: 376     aggaagaggatgaggatcgcgacctatgctttgggcgcttggaactgttcattgaaaggg 435
               |||||      || |||| ||| |||||||||||||||||||| | |||   ||||||| 
Sbjct: 7716300 aggaa------gatgatctcgatctatgctttgggcgcttggatccgtttggtgaaagga 7716247

                                          
Query: 436     aagggcttccgtccacatcagaagggg 462
               |||||||||||||| | ||||| ||||
Sbjct: 7716246 aagggcttccgtccgcttcagaggggg 7716220
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>dbj|AK066916.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013089E02, full
            insert sequence
          Length = 4049

 Score = 95.6 bits (48), Expect = 2e-16
 Identities = 122/147 (82%), Gaps = 6/147 (4%)
 Strand = Plus / Minus

                                                                        
Query: 316  ccttggcgaagaaccgactaaagccccggctttgtttctcgggcaactggttagcaaacg 375
            ||||||||||||||||||| || |||||| |||||||||||||||| ||||||| ||  |
Sbjct: 3619 ccttggcgaagaaccgactgaaaccccggttttgtttctcgggcaattggttagaaattg 3560

                                                                        
Query: 376  aggaagaggatgaggatcgcgacctatgctttgggcgcttggaactgttcattgaaaggg 435
            |||||      || |||| ||| |||||||||||||||||||| | |||   ||||||| 
Sbjct: 3559 aggaa------gatgatctcgatctatgctttgggcgcttggatccgtttggtgaaagga 3506

                                       
Query: 436  aagggcttccgtccacatcagaagggg 462
            |||||||||||||| | ||||| ||||
Sbjct: 3505 aagggcttccgtccgcttcagaggggg 3479
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>gb|AC118672.3| Genomic sequence for Oryza sativa, Nipponbare strain, clone
              OSJNBb0078P24, from chromosome 3, complete sequence
          Length = 146930

 Score = 95.6 bits (48), Expect = 2e-16
 Identities = 122/147 (82%), Gaps = 6/147 (4%)
 Strand = Plus / Plus

                                                                          
Query: 316    ccttggcgaagaaccgactaaagccccggctttgtttctcgggcaactggttagcaaacg 375
              ||||||||||||||||||| || |||||| |||||||||||||||| ||||||| ||  |
Sbjct: 134269 ccttggcgaagaaccgactgaaaccccggttttgtttctcgggcaattggttagaaattg 134328

                                                                          
Query: 376    aggaagaggatgaggatcgcgacctatgctttgggcgcttggaactgttcattgaaaggg 435
              |||||      || |||| ||| |||||||||||||||||||| | |||   ||||||| 
Sbjct: 134329 aggaa------gatgatctcgatctatgctttgggcgcttggatccgtttggtgaaagga 134382

                                         
Query: 436    aagggcttccgtccacatcagaagggg 462
              |||||||||||||| | ||||| ||||
Sbjct: 134383 aagggcttccgtccgcttcagaggggg 134409
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>gb|AC097447.4| Oryza sativa (japonica cultivar-group) chromosome 10 clone
             OSJNBb0042K08, complete sequence
          Length = 117839

 Score = 48.1 bits (24), Expect = 0.033
 Identities = 75/92 (81%)
 Strand = Plus / Minus

                                                                         
Query: 327   aaccgactaaagccccggctttgtttctcgggcaactggttagcaaacgaggaagaggat 386
             |||||||| || || ||||| |||||||| |  |||||||||| ||| ||||||||||| 
Sbjct: 76686 aaccgactgaaacctcggctctgtttctctgtgaactggttagtaaatgaggaagaggaa 76627

                                             
Query: 387   gaggatcgcgacctatgctttgggcgcttgga 418
             || || |  || || |||||||| ||||||||
Sbjct: 76626 gaagaccttgatctgtgctttggacgcttgga 76595
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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
               sequence
          Length = 22685906

 Score = 48.1 bits (24), Expect = 0.033
 Identities = 75/92 (81%)
 Strand = Plus / Minus

                                                                           
Query: 327     aaccgactaaagccccggctttgtttctcgggcaactggttagcaaacgaggaagaggat 386
               |||||||| || || ||||| |||||||| |  |||||||||| ||| ||||||||||| 
Sbjct: 3961918 aaccgactgaaacctcggctctgtttctctgtgaactggttagtaaatgaggaagaggaa 3961859

                                               
Query: 387     gaggatcgcgacctatgctttgggcgcttgga 418
               || || |  || || |||||||| ||||||||
Sbjct: 3961858 gaagaccttgatctgtgctttggacgcttgga 3961827
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>dbj|AK064809.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013000D20, full
            insert sequence
          Length = 3194

 Score = 48.1 bits (24), Expect = 0.033
 Identities = 75/92 (81%)
 Strand = Plus / Minus

                                                                        
Query: 327  aaccgactaaagccccggctttgtttctcgggcaactggttagcaaacgaggaagaggat 386
            |||||||| || || ||||| |||||||| |  |||||||||| ||| ||||||||||| 
Sbjct: 2693 aaccgactgaaacctcggctctgtttctctgtgaactggttagtaaatgaggaagaggaa 2634

                                            
Query: 387  gaggatcgcgacctatgctttgggcgcttgga 418
            || || |  || || |||||||| ||||||||
Sbjct: 2633 gaagaccttgatctgtgctttggacgcttgga 2602
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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 48.1 bits (24), Expect = 0.033
 Identities = 75/92 (81%)
 Strand = Plus / Minus

                                                                           
Query: 327     aaccgactaaagccccggctttgtttctcgggcaactggttagcaaacgaggaagaggat 386
               |||||||| || || ||||| |||||||| |  |||||||||| ||| ||||||||||| 
Sbjct: 3961839 aaccgactgaaacctcggctctgtttctctgtgaactggttagtaaatgaggaagaggaa 3961780

                                               
Query: 387     gaggatcgcgacctatgctttgggcgcttgga 418
               || || |  || || |||||||| ||||||||
Sbjct: 3961779 gaagaccttgatctgtgctttggacgcttgga 3961748
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>gb|AC174464.1| Oryza sativa (japonica cultivar-group) chromosome 10 BAC clone
             OSJNBb0094D21, complete sequence
          Length = 127821

 Score = 48.1 bits (24), Expect = 0.033
 Identities = 75/92 (81%)
 Strand = Plus / Minus

                                                                         
Query: 327   aaccgactaaagccccggctttgtttctcgggcaactggttagcaaacgaggaagaggat 386
             |||||||| || || ||||| |||||||| |  |||||||||| ||| ||||||||||| 
Sbjct: 15844 aaccgactgaaacctcggctctgtttctctgtgaactggttagtaaatgaggaagaggaa 15785

                                             
Query: 387   gaggatcgcgacctatgctttgggcgcttgga 418
             || || |  || || |||||||| ||||||||
Sbjct: 15784 gaagaccttgatctgtgctttggacgcttgga 15753
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>emb|AJ867256.1| Oncorhynchus mykiss IL11 gene for interleukin-11, exons 1-5
          Length = 9894

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 129  aaggcaagtattactccagca 149
            |||||||||||||||||||||
Sbjct: 4898 aaggcaagtattactccagca 4878
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>gb|AC186558.1| Gasterosteus aculeatus clone VMRC26-150D01, complete sequence
          Length = 166468

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 373   acgaggaagaggatgaggat 392
             ||||||||||||||||||||
Sbjct: 96189 acgaggaagaggatgaggat 96170
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>ref|XM_958350.1| Neurospora crassa OR74A hypothetical protein ( related to spliceosome
            associated protein 145 [imported] - Neurospora crassa
            OR74A ) (NCU05452.1) partial mRNA
          Length = 1941

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 373  acgaggaagaggatgaggat 392
            ||||||||||||||||||||
Sbjct: 1337 acgaggaagaggatgaggat 1356
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>ref|XM_325306.1| Neurospora crassa OR74A hypothetical protein ( related to spliceosome
            associated protein 145 [imported] - Neurospora crassa
            OR74A ) (NCU05452.1) partial mRNA
          Length = 1941

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 373  acgaggaagaggatgaggat 392
            ||||||||||||||||||||
Sbjct: 1337 acgaggaagaggatgaggat 1356
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>ref|XM_542723.2| PREDICTED: Canis familiaris similar to Ectonucleoside triphosphate
            diphosphohydrolase 3 (NTPDase3) (Ecto-ATP
            diphosphohydrolase) (ATPDase) (Ecto-apyrase) (CD39
            antigen-like 3) (HB6) (LOC485604), mRNA
          Length = 1644

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 545  tttctgggcatactcgccttcttc 568
            ||||||||||| ||||||||||||
Sbjct: 1513 tttctgggcatcctcgccttcttc 1536
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>gb|AC126272.3| Mus musculus BAC clone RP23-48P22 from chromosome 14, complete sequence
          Length = 191606

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 22     agacaacagcaacccagaaaaaac 45
              ||||| ||||||||||||||||||
Sbjct: 111563 agacagcagcaacccagaaaaaac 111540
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>emb|AL353607.20| Human DNA sequence from clone RP11-652B19 on chromosome 9 Contains part
             of the PCSK5 gene for proprotein convertase
             subtilisin/kexin type 5, complete sequence
          Length = 141170

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 535   ggccagatggtttctgggca 554
             ||||||||||||||||||||
Sbjct: 53758 ggccagatggtttctgggca 53739
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>ref|XM_782110.1| PREDICTED: Strongylocentrotus purpuratus similar to twk-8 protein
           like family member (XE894) (LOC582143), mRNA
          Length = 1635

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 367 tagcaaacgaggaagaggatgagg 390
           |||||||||||||||| |||||||
Sbjct: 578 tagcaaacgaggaagatgatgagg 555
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>ref|XM_782066.1| PREDICTED: Strongylocentrotus purpuratus similar to twk-8 protein
           like family member (XE894) (LOC582095), mRNA
          Length = 1209

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 367 tagcaaacgaggaagaggatgagg 390
           |||||||||||||||| |||||||
Sbjct: 197 tagcaaacgaggaagatgatgagg 174
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>emb|CR524821.5| Zebrafish DNA sequence from clone CH211-192F15 in linkage group 16,
              complete sequence
          Length = 152728

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 2      gtgaggttttagtgaggttt 21
              ||||||||||||||||||||
Sbjct: 125292 gtgaggttttagtgaggttt 125311
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>emb|AL355933.1|NCB8B20 Neurospora crassa DNA linkage group II BAC clone B8B20
          Length = 86476

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 373   acgaggaagaggatgaggat 392
             ||||||||||||||||||||
Sbjct: 26004 acgaggaagaggatgaggat 26023
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>gb|AC083807.17| Homo sapiens 12 BAC RP11-775A14 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 123587

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 498   ttccctgactccagcatttc 517
             ||||||||||||||||||||
Sbjct: 80221 ttccctgactccagcatttc 80240
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>dbj|AK128149.1| Homo sapiens cDNA FLJ46272 fis, clone TESTI4028692
          Length = 3666

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 498 ttccctgactccagcatttc 517
           ||||||||||||||||||||
Sbjct: 706 ttccctgactccagcatttc 687
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>ref|XM_692291.1| PREDICTED: Danio rerio similar to MYST histone acetyltransferase
            (monocytic leukemia) 4 (LOC568932), mRNA
          Length = 4899

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 373  acgaggaagaggatgaggat 392
            ||||||||||||||||||||
Sbjct: 2021 acgaggaagaggatgaggat 2040
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>ref|NM_058529.2| Caenorhabditis elegans Y37E3.10 (Y37E3.10) mRNA, complete cds
          Length = 1549

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 373 acgaggaagaggatgaggat 392
           ||||||||||||||||||||
Sbjct: 905 acgaggaagaggatgaggat 924
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>gb|AC007603.5| Homo sapiens chromosome 16 clone RP11-305A4, complete sequence
          Length = 196927

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 265   aacaagccaacatcacagaa 284
             ||||||||||||||||||||
Sbjct: 73542 aacaagccaacatcacagaa 73523
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>gb|AC084676.1|CBRG47J19 Caenorhabditis briggsae cosmid G47J19, complete sequence
          Length = 41327

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 373   acgaggaagaggatgaggat 392
             ||||||||||||||||||||
Sbjct: 22390 acgaggaagaggatgaggat 22371
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>emb|BX322657.13| Zebrafish DNA sequence from clone DKEYP-53D3 in linkage group 22,
             complete sequence
          Length = 126381

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 495   acattccctgactccagcat 514
             ||||||||||||||||||||
Sbjct: 35389 acattccctgactccagcat 35408
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>gb|AC087079.1| Caenorhabditis elegans cosmid Y37E3, complete sequence
          Length = 106935

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 373   acgaggaagaggatgaggat 392
             ||||||||||||||||||||
Sbjct: 15834 acgaggaagaggatgaggat 15853
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>emb|AL929334.12| Zebrafish DNA sequence from clone DKEY-24F15, complete sequence
          Length = 226833

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 373   acgaggaagaggatgaggat 392
             ||||||||||||||||||||
Sbjct: 30885 acgaggaagaggatgaggat 30866
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>gb|AC134585.6| Mus musculus BAC clone RP23-302F9 from 8, complete sequence
          Length = 249251

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 514   tttcctggtctgtatcatga 533
             ||||||||||||||||||||
Sbjct: 42156 tttcctggtctgtatcatga 42137
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>gb|AC138460.4| Mus musculus BAC clone RP23-295A7 from 8, complete sequence
          Length = 186258

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 514   tttcctggtctgtatcatga 533
             ||||||||||||||||||||
Sbjct: 27622 tttcctggtctgtatcatga 27641


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,524,941
Number of Sequences: 3902068
Number of extensions: 4524941
Number of successful extensions: 92814
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 34
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 92656
Number of HSP's gapped (non-prelim): 156
length of query: 594
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 571
effective length of database: 17,143,297,704
effective search space: 9788822988984
effective search space used: 9788822988984
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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