| Clone Name | rbags26c14 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 67.9 bits (34), Expect = 3e-08 Identities = 70/82 (85%) Strand = Plus / Plus Query: 341 aggagggccttcacttgaaagagaaaccgctccatggatctctttgtggcaggtatcttg 400 ||||| ||||||||||| || | || ||||||| ||||||||| | ||||||||||| Sbjct: 2915519 aggagcgccttcacttggaatacgaaacgctccagggatctcttcgcaacaggtatcttg 2915578 Query: 401 ctcgtgatcattgttcgcttgt 422 || ||||||||||||||||||| Sbjct: 2915579 cttgtgatcattgttcgcttgt 2915600 Score = 63.9 bits (32), Expect = 5e-07 Identities = 44/48 (91%) Strand = Plus / Plus Query: 426 cctttgcctctgcacatatagtttggattgttcttgttgctttctgaa 473 |||| |||||||||||||| |||||||||||| |||| |||||||||| Sbjct: 2915695 ccttagcctctgcacatatggtttggattgtttttgtagctttctgaa 2915742 Score = 56.0 bits (28), Expect = 1e-04 Identities = 40/44 (90%) Strand = Plus / Plus Query: 176 ttttcttcggctggagtttcaggatcagtctccatctcttcttg 219 ||||| || ||||| |||||||||||||||||||||| |||||| Sbjct: 2915252 ttttcgtcagctggggtttcaggatcagtctccatctgttcttg 2915295 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 146 tctgtcacatcatcatccac 165 |||||||||||||||||||| Sbjct: 20519664 tctgtcacatcatcatccac 20519683
>dbj|AP005632.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBb0050B07 Length = 142134 Score = 67.9 bits (34), Expect = 3e-08 Identities = 70/82 (85%) Strand = Plus / Plus Query: 341 aggagggccttcacttgaaagagaaaccgctccatggatctctttgtggcaggtatcttg 400 ||||| ||||||||||| || | || ||||||| ||||||||| | ||||||||||| Sbjct: 85806 aggagcgccttcacttggaatacgaaacgctccagggatctcttcgcaacaggtatcttg 85865 Query: 401 ctcgtgatcattgttcgcttgt 422 || ||||||||||||||||||| Sbjct: 85866 cttgtgatcattgttcgcttgt 85887 Score = 63.9 bits (32), Expect = 5e-07 Identities = 44/48 (91%) Strand = Plus / Plus Query: 426 cctttgcctctgcacatatagtttggattgttcttgttgctttctgaa 473 |||| |||||||||||||| |||||||||||| |||| |||||||||| Sbjct: 85982 ccttagcctctgcacatatggtttggattgtttttgtagctttctgaa 86029 Score = 56.0 bits (28), Expect = 1e-04 Identities = 40/44 (90%) Strand = Plus / Plus Query: 176 ttttcttcggctggagtttcaggatcagtctccatctcttcttg 219 ||||| || ||||| |||||||||||||||||||||| |||||| Sbjct: 85539 ttttcgtcagctggggtttcaggatcagtctccatctgttcttg 85582
>gb|AY133248.1| Aegilops tauschii starch synthase II gene, complete cds Length = 9024 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1 cgctcttatattaatttacgga 22 |||||||||||||||||||||| Sbjct: 2839 cgctcttatattaatttacgga 2818
>gb|AC182461.3| Pan troglodytes BAC clone CH251-673H10 from chromosome 6, complete sequence Length = 188415 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Plus Query: 498 tgtcaccatgttgcccaaactg 519 |||||||||||||||||||||| Sbjct: 96329 tgtcaccatgttgcccaaactg 96350
>dbj|AB201447.1| Triticum aestivum wSSII-D gene for starch synthase II-D, complete cds Length = 7010 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1 cgctcttatattaatttacgga 22 |||||||||||||||||||||| Sbjct: 1595 cgctcttatattaatttacgga 1574
>gb|AC119218.7| Mus musculus chromosome 7, clone RP24-200I20, complete sequence Length = 171061 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 261 gagagcttaccacatgcccat 281 ||||||||||||||||||||| Sbjct: 94079 gagagcttaccacatgcccat 94059
>emb|AL139000.9| Human DNA sequence from clone RP11-173M10 on chromosome 13q14.3-21.31, complete sequence Length = 157028 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 472 aacttcttttatcatgtgaac 492 ||||||||||||||||||||| Sbjct: 111518 aacttcttttatcatgtgaac 111498
>emb|AL034416.1|HS656F14 Human DNA sequence from clone RP4-656F14 on chromosome Xq26.2-27.3 Contains GSSs, complete sequence Length = 31523 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 446 gtttggattgttcttgttgct 466 ||||||||||||||||||||| Sbjct: 11629 gtttggattgttcttgttgct 11609
>gb|AC133862.6| Medicago truncatula clone mth2-30d7, complete sequence Length = 130054 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 4 tcttatattaatttacggaaagggt 28 ||||| ||||||||||||||||||| Sbjct: 76945 tcttaaattaatttacggaaagggt 76969
>gb|AC124957.18| Medicago truncatula clone mth2-15k14, complete sequence Length = 140624 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 4 tcttatattaatttacggaaagggt 28 ||||| ||||||||||||||||||| Sbjct: 68557 tcttaaattaatttacggaaagggt 68533
>gb|AE016817.2| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome IV, complete sequence Length = 1466886 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 153 catcatcatccaccatcttgt 173 ||||||||||||||||||||| Sbjct: 497543 catcatcatccaccatcttgt 497523
>ref|NM_209342.1| Eremothecium gossypii ADL107Cp (ADL107C), mRNA Length = 588 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 153 catcatcatccaccatcttgt 173 ||||||||||||||||||||| Sbjct: 537 catcatcatccaccatcttgt 557
>gb|AC006442.1|AC006442 Homo sapiens, clone hRPK.7_A_1, complete sequence Length = 155935 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 472 aacttcttttatcatgtgaac 492 ||||||||||||||||||||| Sbjct: 66612 aacttcttttatcatgtgaac 66632
>gb|CP000031.1| Silicibacter pomeroyi DSS-3, complete genome Length = 4109442 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 448 ttggattgttcttgttgctt 467 |||||||||||||||||||| Sbjct: 1172408 ttggattgttcttgttgctt 1172427
>ref|NM_001016332.2| Xenopus tropicalis hypothetical protein LOC549086 (LOC549086), mRNA Length = 1310 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 151 cacatcatcatccaccatct 170 |||||||||||||||||||| Sbjct: 734 cacatcatcatccaccatct 715
>gb|BT018150.1| Zea mays clone EL01N0555F10.c mRNA sequence Length = 1189 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 445 agtttggattgttcttgttgcttt 468 |||||||||||||||| ||||||| Sbjct: 633 agtttggattgttcttcttgcttt 656
>gb|AY368673.1| Triticum turgidum HMW-glutenin locus, complete sequence Length = 285506 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 3 ctcttatattaatttacgga 22 |||||||||||||||||||| Sbjct: 802 ctcttatattaatttacgga 821
>gb|AC108334.10| Rattus norvegicus 4 BAC CH230-151B7 (Children's Hospital Oakland Research Institute) complete sequence Length = 187811 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 494 atattgtcaccatgttgccc 513 |||||||||||||||||||| Sbjct: 174352 atattgtcaccatgttgccc 174371
>gb|AC183919.2| Pan troglodytes BAC clone CH251-691O9 from chromosome 7, complete sequence Length = 188947 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 500 tcaccatgttgcccaaactg 519 |||||||||||||||||||| Sbjct: 15132 tcaccatgttgcccaaactg 15113
>gb|DQ191683.1| Lysiosquillina maculata mitochondrion, complete genome Length = 16325 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 458 cttgttgctttctgaacttctttt 481 |||||||||||||||| ||||||| Sbjct: 7812 cttgttgctttctgaatttctttt 7789
>gb|AC106017.11| Homo sapiens chromosome 17, clone RP11-744A16, complete sequence Length = 178625 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 500 tcaccatgttgcccaaactg 519 |||||||||||||||||||| Sbjct: 97717 tcaccatgttgcccaaactg 97698 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 500 tcaccatgttgcccaaactg 519 |||||||||||||||||||| Sbjct: 60325 tcaccatgttgcccaaactg 60344
>gb|AY230322.1| Triticum aestivum FCA-A1 (Fca) gene, partial cds Length = 9585 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 3 ctcttatattaatttacgga 22 |||||||||||||||||||| Sbjct: 9220 ctcttatattaatttacgga 9239
>gb|AC004895.2| Homo sapiens PAC clone RP4-810E6 from 7, complete sequence Length = 152927 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 500 tcaccatgttgcccaaactg 519 |||||||||||||||||||| Sbjct: 77936 tcaccatgttgcccaaactg 77955
>gb|AC147133.2| Pan troglodytes BAC clone CH251-372A19 from Y, complete sequence Length = 192074 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 500 tcaccatgttgcccaaactg 519 |||||||||||||||||||| Sbjct: 114869 tcaccatgttgcccaaactg 114850
>gb|AC079325.10| Homo sapiens chromosome 17, clone RP11-194J3, complete sequence Length = 191746 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 500 tcaccatgttgcccaaactg 519 |||||||||||||||||||| Sbjct: 65162 tcaccatgttgcccaaactg 65143
>emb|AL500527.19| Human DNA sequence from clone RP11-302K17 on chromosome 10 Contains the gene for Hermansky-Pudlak syndrome-6 protein (HPS6), two pseudogenes for transcription elongation factor B (SIII), polypeptide 1, the LDB1 gene for LIM domain binding 1, a novel gene (KIAA0595), the NOLC1 gene for nucleolar and coiled-body phosphoprotein 1 and five CpG islands, complete sequence Length = 158434 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 500 tcaccatgttgcccaaactg 519 |||||||||||||||||||| Sbjct: 69504 tcaccatgttgcccaaactg 69523
>emb|AL450489.12| Human DNA sequence from clone RP11-203B9 on chromosome 6 Contains the 3 'end of gene FLJ30162, a novel gene, the 5'end of gene KIAA0576, the 3' end of a novel gene and a CpG island, complete sequence Length = 101666 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 500 tcaccatgttgcccaaactg 519 |||||||||||||||||||| Sbjct: 54943 tcaccatgttgcccaaactg 54962
>emb|AL360169.17| Human DNA sequence from clone RP11-732M18 on chromosome 6 Contains the 5' end of the gene for tubby super-family protein (TUSP, KIAA1397), a novel gene, part of a novel gene and two CpG islands, complete sequence Length = 180635 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 500 tcaccatgttgcccaaactg 519 |||||||||||||||||||| Sbjct: 139718 tcaccatgttgcccaaactg 139699
>gb|AF491780.1| Homo sapiens neuregulin 1 (NRG1) gene, partial cds, alternatively spliced Length = 1285452 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 500 tcaccatgttgcccaaactg 519 |||||||||||||||||||| Sbjct: 1200388 tcaccatgttgcccaaactg 1200407
>emb|AL357078.35| Human DNA sequence from clone RP4-535B20 on chromosome 1 Contains part of a novel gene, a novel gene, a ribosomal protein S24 (RPS24) pseudogene, a mitochondrial ribosomal protein S21 (MRPS21) pseudogene and a CpG island, complete sequence Length = 147603 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 500 tcaccatgttgcccaaactg 519 |||||||||||||||||||| Sbjct: 69265 tcaccatgttgcccaaactg 69246
>emb|AL359272.9| Human DNA sequence from clone RP11-554P16 on chromosome X Contains the 5' end of gene KIAA1202 and a CpG island, complete sequence Length = 173510 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 500 tcaccatgttgcccaaactg 519 |||||||||||||||||||| Sbjct: 81179 tcaccatgttgcccaaactg 81160
>emb|AL354806.22| Human DNA sequence from clone RP11-521J24 on chromosome 13 Contains a novel gene, complete sequence Length = 198959 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 500 tcaccatgttgcccaaactg 519 |||||||||||||||||||| Sbjct: 171856 tcaccatgttgcccaaactg 171875
>emb|AL160006.16| Human DNA sequence from clone RP4-773N10 on chromosome 1p13.1-13.3 Contains the 3' end of gene KIAA1761 (FLJ14743) and the ALX3 gene for aristaless-like homeobox 3, complete sequence Length = 91783 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 500 tcaccatgttgcccaaactg 519 |||||||||||||||||||| Sbjct: 26756 tcaccatgttgcccaaactg 26775
>emb|AL157388.12| Human DNA sequence from clone RP11-215A21 on chromosome 10 Contains the 5' end of a novel gene (MGC33215), a ribosomal protein L17 (rpL23) (RPL17) pseudogene and three CpG islands, complete sequence Length = 183382 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 500 tcaccatgttgcccaaactg 519 |||||||||||||||||||| Sbjct: 28043 tcaccatgttgcccaaactg 28024
>emb|AL137857.29| Human DNA sequence from clone RP5-1166H10 on chromosome 1p33-35.1 Contains the MATN1 gene for matrilin 1 cartilage matrix protein, a novel gene (FLJ46197, FLJ33163), the 3' end of the gene for Lysosomal-associated multispanning membrane protein-5 (LAPTM5) and a CpG island, complete sequence Length = 152042 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 500 tcaccatgttgcccaaactg 519 |||||||||||||||||||| Sbjct: 37854 tcaccatgttgcccaaactg 37873
>emb|AL136314.12| Human DNA sequence from clone RP4-579A14 on chromosome 6 Contains 2 CpG islands, complete sequence Length = 88557 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 500 tcaccatgttgcccaaactg 519 |||||||||||||||||||| Sbjct: 15858 tcaccatgttgcccaaactg 15877
>emb|AL136372.8| Human DNA sequence from clone RP11-134C1 on chromosome 1q25.1-31.1 Contains a zinc finger protein pseudogene, complete sequence Length = 165880 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 371 tccatggatctctttgtggc 390 |||||||||||||||||||| Sbjct: 69980 tccatggatctctttgtggc 69961
>emb|AL133419.15| Human DNA sequence from clone RP11-101E14 on chromosome 20 Contains the HSPEP1 heat shock 10 kDa protein 1 (chaperonin 10) pseudogene and two novel genes, complete sequence Length = 125057 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 500 tcaccatgttgcccaaactg 519 |||||||||||||||||||| Sbjct: 57480 tcaccatgttgcccaaactg 57499
>emb|AL121958.6|HSDJ71H19 Human DNA sequence from clone RP1-71H19 on chromosome 6 Contains part of the PRIM2A gene for primase polypeptide 2A (58kD) and a novel gene, complete sequence Length = 138411 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 500 tcaccatgttgcccaaactg 519 |||||||||||||||||||| Sbjct: 14082 tcaccatgttgcccaaactg 14063
>emb|AL022717.2|HS201D7 Human DNA sequence from clone RP1-201D7 on chromosome 6p22.1-22.3 Contains part of a novel gene (FLJ20342), complete sequence Length = 100733 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 500 tcaccatgttgcccaaactg 519 |||||||||||||||||||| Sbjct: 70215 tcaccatgttgcccaaactg 70234
>emb|AL008719.1|HS342B11 Human DNA sequence from clone CTA-342B11 on chromosome 22q12.1-12.3 Contains a novel gene and a CpG island, complete sequence Length = 56458 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 500 tcaccatgttgcccaaactg 519 |||||||||||||||||||| Sbjct: 24144 tcaccatgttgcccaaactg 24125
>emb|CR936785.1| Homo sapiens mRNA; cDNA DKFZp781O2341 (from clone DKFZp781O2341) Length = 2340 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 500 tcaccatgttgcccaaactg 519 |||||||||||||||||||| Sbjct: 798 tcaccatgttgcccaaactg 817
>dbj|BS000646.3| Pan troglodytes chromosome Y clone: PTB-569F12, complete sequence Length = 225175 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 500 tcaccatgttgcccaaactg 519 |||||||||||||||||||| Sbjct: 192756 tcaccatgttgcccaaactg 192737
>gb|DP000054.1| Pan troglodytes chromosome Y, partial sequence Length = 23952694 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 500 tcaccatgttgcccaaactg 519 |||||||||||||||||||| Sbjct: 18923150 tcaccatgttgcccaaactg 18923169
>dbj|AK095057.1| Homo sapiens cDNA FLJ37738 fis, clone BRHIP2021762 Length = 3550 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 500 tcaccatgttgcccaaactg 519 |||||||||||||||||||| Sbjct: 2026 tcaccatgttgcccaaactg 2045
>gb|AC145334.12| Pan troglodytes clone rp43-24d7, complete sequence Length = 139632 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 500 tcaccatgttgcccaaactg 519 |||||||||||||||||||| Sbjct: 94234 tcaccatgttgcccaaactg 94253
>dbj|AK057576.1| Homo sapiens cDNA FLJ33014 fis, clone THYMU1000382 Length = 2104 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 500 tcaccatgttgcccaaactg 519 |||||||||||||||||||| Sbjct: 2090 tcaccatgttgcccaaactg 2071
>gb|AC036176.8| Homo sapiens chromosome 18, clone RP11-635N19, complete sequence Length = 173252 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 500 tcaccatgttgcccaaactg 519 |||||||||||||||||||| Sbjct: 96385 tcaccatgttgcccaaactg 96404
>gb|AC093601.4| Homo sapiens BAC clone RP11-338P22 from 4, complete sequence Length = 118129 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 500 tcaccatgttgcccaaactg 519 |||||||||||||||||||| Sbjct: 103243 tcaccatgttgcccaaactg 103224
>gb|AC091814.10| Homo sapiens 12p BAC RP11-290C10 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 149000 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 500 tcaccatgttgcccaaactg 519 |||||||||||||||||||| Sbjct: 122574 tcaccatgttgcccaaactg 122593
>gb|AC008393.7| Homo sapiens chromosome 5 clone CTC-241N9, complete sequence Length = 166847 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 500 tcaccatgttgcccaaactg 519 |||||||||||||||||||| Sbjct: 98149 tcaccatgttgcccaaactg 98130
>gb|AC083977.5| Homo sapiens chromosome 8, clone RP11-317J8, complete sequence Length = 212555 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 500 tcaccatgttgcccaaactg 519 |||||||||||||||||||| Sbjct: 128669 tcaccatgttgcccaaactg 128688
>gb|AC018795.10| Homo sapiens chromosome 11, clone RP11-699C18, complete sequence Length = 187836 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 500 tcaccatgttgcccaaactg 519 |||||||||||||||||||| Sbjct: 48697 tcaccatgttgcccaaactg 48678
>gb|AC013561.9| Homo sapiens chromosome 8, clone RP11-301H15, complete sequence Length = 185249 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 500 tcaccatgttgcccaaactg 519 |||||||||||||||||||| Sbjct: 142807 tcaccatgttgcccaaactg 142788
>gb|AC021753.7| Homo sapiens chromosome 15 clone RP11-129I12 map 15q15, complete sequence Length = 167996 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 500 tcaccatgttgcccaaactg 519 |||||||||||||||||||| Sbjct: 132019 tcaccatgttgcccaaactg 132000
>gb|AC091609.2| Homo sapiens chromosome 1 clone RP11-109I2, complete sequence Length = 183521 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 500 tcaccatgttgcccaaactg 519 |||||||||||||||||||| Sbjct: 145109 tcaccatgttgcccaaactg 145128
>gb|AC011895.4| Homo sapiens BAC clone RP11-126L15 from 7, complete sequence Length = 172358 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 500 tcaccatgttgcccaaactg 519 |||||||||||||||||||| Sbjct: 153895 tcaccatgttgcccaaactg 153876
>gb|AC022408.6| Homo sapiens chromosome 15 clone RP11-118J16 map 15q15, complete sequence Length = 150266 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 500 tcaccatgttgcccaaactg 519 |||||||||||||||||||| Sbjct: 64436 tcaccatgttgcccaaactg 64417
>gb|AC139077.2| Homo sapiens chromosome 17, clone XXfos-88899C12, complete sequence Length = 37411 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 500 tcaccatgttgcccaaactg 519 |||||||||||||||||||| Sbjct: 35929 tcaccatgttgcccaaactg 35948
>gb|AC139138.2| Homo sapiens chromosome 17, clone XXfos-82524G9, complete sequence Length = 41839 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 500 tcaccatgttgcccaaactg 519 |||||||||||||||||||| Sbjct: 22996 tcaccatgttgcccaaactg 23015
>tpg|BK000383.1| TPA: TPA_exp: Homo sapiens neuregulin 1 isoform (NRG1) gene, alternatively spliced, complete cds Length = 1421559 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 500 tcaccatgttgcccaaactg 519 |||||||||||||||||||| Sbjct: 1200388 tcaccatgttgcccaaactg 1200407
>gb|AC148713.1| Macaca mulatta Major Histocompatibility Complex BAC MMU457F04, complete sequence Length = 149331 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 500 tcaccatgttgcccaaactg 519 |||||||||||||||||||| Sbjct: 16369 tcaccatgttgcccaaactg 16388
>gb|AC148712.1| Macaca mulatta Major Histocompatibility Complex BAC MMU429H11, complete sequence Length = 155789 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 500 tcaccatgttgcccaaactg 519 |||||||||||||||||||| Sbjct: 37801 tcaccatgttgcccaaactg 37820
>gb|AC148702.1| Macaca mulatta Major Histocompatibility Complex BAC MMU326H24, complete sequence Length = 202513 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 500 tcaccatgttgcccaaactg 519 |||||||||||||||||||| Sbjct: 194071 tcaccatgttgcccaaactg 194090
>gb|AC148699.1| Macaca mulatta Major Histocompatibility Complex BAC MMU274L13, complete sequence Length = 210164 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 500 tcaccatgttgcccaaactg 519 |||||||||||||||||||| Sbjct: 189035 tcaccatgttgcccaaactg 189054
>gb|AC148686.1| Macaca mulatta Major Histocompatibility Complex BAC MMU192G09, complete sequence Length = 181166 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 500 tcaccatgttgcccaaactg 519 |||||||||||||||||||| Sbjct: 137770 tcaccatgttgcccaaactg 137751 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 500 tcaccatgttgcccaaactg 519 |||||||||||||||||||| Sbjct: 137691 tcaccatgttgcccaaactg 137710
>gb|AC007952.15| Homo sapiens chromosome 17, clone RP11-160E2, complete sequence Length = 158103 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 500 tcaccatgttgcccaaactg 519 |||||||||||||||||||| Sbjct: 150674 tcaccatgttgcccaaactg 150693 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 500 tcaccatgttgcccaaactg 519 |||||||||||||||||||| Sbjct: 61883 tcaccatgttgcccaaactg 61864
>gb|AC012170.6|AC012170 Homo sapiens chromosome 15 clone RP11-562A8 map 15q21.1, complete sequence Length = 198550 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 500 tcaccatgttgcccaaactg 519 |||||||||||||||||||| Sbjct: 102177 tcaccatgttgcccaaactg 102196
>gb|AC127070.10| Homo sapiens 12 BAC RP11-46H11 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 181012 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 500 tcaccatgttgcccaaactg 519 |||||||||||||||||||| Sbjct: 83949 tcaccatgttgcccaaactg 83930
>dbj|AB128049.1| Macaca mulatta genes, MHC class I region, partial and complete cds Length = 3284914 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 500 tcaccatgttgcccaaactg 519 |||||||||||||||||||| Sbjct: 1077478 tcaccatgttgcccaaactg 1077459 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 500 tcaccatgttgcccaaactg 519 |||||||||||||||||||| Sbjct: 936109 tcaccatgttgcccaaactg 936090
>gb|AC093744.2| Homo sapiens BAC clone RP11-25B14 from 4, complete sequence Length = 188914 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 444 tagtttggattgttcttgtt 463 |||||||||||||||||||| Sbjct: 23477 tagtttggattgttcttgtt 23496
>gb|AC093110.4| Homo sapiens BAC clone RP11-564H16 from 2, complete sequence Length = 168550 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 500 tcaccatgttgcccaaactg 519 |||||||||||||||||||| Sbjct: 783 tcaccatgttgcccaaactg 802
>gb|AC009267.15|AC009267 Homo sapiens chromosome 18, clone RP11-495C15, complete sequence Length = 188923 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 500 tcaccatgttgcccaaactg 519 |||||||||||||||||||| Sbjct: 146070 tcaccatgttgcccaaactg 146051
>gb|AC016735.10| Homo sapiens BAC clone RP11-391M15 from 2, complete sequence Length = 182730 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 500 tcaccatgttgcccaaactg 519 |||||||||||||||||||| Sbjct: 164482 tcaccatgttgcccaaactg 164501
>gb|AC073215.5| Homo sapiens BAC clone RP11-501L9 from 2, complete sequence Length = 105392 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 500 tcaccatgttgcccaaactg 519 |||||||||||||||||||| Sbjct: 73269 tcaccatgttgcccaaactg 73250
>gb|AF288992.1|AF288992 Homo sapiens 15 kDa selenoprotein (SEP15) gene, complete cds Length = 64165 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 500 tcaccatgttgcccaaactg 519 |||||||||||||||||||| Sbjct: 26285 tcaccatgttgcccaaactg 26304
>gb|AC073896.41| Homo sapiens 12 BAC RP11-977G19 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 174487 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 500 tcaccatgttgcccaaactg 519 |||||||||||||||||||| Sbjct: 12358 tcaccatgttgcccaaactg 12339
>gb|AC106869.1| Homo sapiens BAC clone RP11-212L24 from 2, complete sequence Length = 68974 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 500 tcaccatgttgcccaaactg 519 |||||||||||||||||||| Sbjct: 12340 tcaccatgttgcccaaactg 12359
>gb|AC092839.4| Homo sapiens BAC clone RP11-257N16 from 2, complete sequence Length = 186464 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 500 tcaccatgttgcccaaactg 519 |||||||||||||||||||| Sbjct: 185247 tcaccatgttgcccaaactg 185266
>gb|AC016559.3| Homo sapiens chromosome 5 clone CTC-422A18, complete sequence Length = 143039 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 500 tcaccatgttgcccaaactg 519 |||||||||||||||||||| Sbjct: 129598 tcaccatgttgcccaaactg 129579
>gb|AC103764.7| Homo sapiens chromosome 8, clone RP11-1057B8, complete sequence Length = 179860 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 500 tcaccatgttgcccaaactg 519 |||||||||||||||||||| Sbjct: 57745 tcaccatgttgcccaaactg 57726
>gb|AC006452.5| Homo sapiens PAC clone RP4-592P3 from 7, complete sequence Length = 121705 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 500 tcaccatgttgcccaaactg 519 |||||||||||||||||||| Sbjct: 115114 tcaccatgttgcccaaactg 115095
>gb|AC087591.2| Homo sapiens chromosome 3 clone RP11-95M5 map 3p, complete sequence Length = 161014 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 500 tcaccatgttgcccaaactg 519 |||||||||||||||||||| Sbjct: 72091 tcaccatgttgcccaaactg 72110
>gb|AC105247.16| Homo sapiens chromosome 18, clone CTD-2545G7, complete sequence Length = 165814 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 500 tcaccatgttgcccaaactg 519 |||||||||||||||||||| Sbjct: 89497 tcaccatgttgcccaaactg 89516
>gb|AC146450.5| Pan troglodytes BAC clone clone CH251-552K12 from y, complete sequence Length = 172072 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 500 tcaccatgttgcccaaactg 519 |||||||||||||||||||| Sbjct: 30350 tcaccatgttgcccaaactg 30331
>dbj|AP005169.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0077J18 Length = 180944 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 146 tctgtcacatcatcatccac 165 |||||||||||||||||||| Sbjct: 100774 tctgtcacatcatcatccac 100793
>dbj|AP004990.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0007H12 Length = 150881 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 146 tctgtcacatcatcatccac 165 |||||||||||||||||||| Sbjct: 10743 tctgtcacatcatcatccac 10762
>emb|BX647375.1|HSM807520 Homo sapiens mRNA; cDNA DKFZp686B0310 (from clone DKFZp686B0310) Length = 4218 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 500 tcaccatgttgcccaaactg 519 |||||||||||||||||||| Sbjct: 2621 tcaccatgttgcccaaactg 2640
>gb|AC006371.2|AC006371 Homo sapiens BAC clone RP11-304C24 from Y, complete sequence Length = 202354 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 500 tcaccatgttgcccaaactg 519 |||||||||||||||||||| Sbjct: 116448 tcaccatgttgcccaaactg 116467
>gb|AC090710.16| Homo sapiens 12 BAC RP11-754J4 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 174302 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 500 tcaccatgttgcccaaactg 519 |||||||||||||||||||| Sbjct: 14409 tcaccatgttgcccaaactg 14428
>emb|CR761423.2| Xenopus tropicalis finished cDNA, clone TEgg086p06 Length = 1310 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 151 cacatcatcatccaccatct 170 |||||||||||||||||||| Sbjct: 734 cacatcatcatccaccatct 715
>dbj|AP002490.4| Homo sapiens genomic DNA, chromosome 11q clone:RP11-849H4, complete sequence Length = 191986 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 500 tcaccatgttgcccaaactg 519 |||||||||||||||||||| Sbjct: 148688 tcaccatgttgcccaaactg 148707
>gb|AE015925.1| Chlamydophila caviae GPIC, complete genome Length = 1173390 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 465 ctttctgaacttcttttatc 484 |||||||||||||||||||| Sbjct: 163354 ctttctgaacttcttttatc 163335
>emb|AL137062.13| Human DNA sequence from clone RP11-198M22 on chromosome 6, complete sequence Length = 137272 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 500 tcaccatgttgcccaaactg 519 |||||||||||||||||||| Sbjct: 7147 tcaccatgttgcccaaactg 7128
>emb|AL121989.12|HSDJ604K5 Human DNA sequence from clone RP4-604K5 on chromosome 1p22.2-31.1. Contains a gene for a 15 kDa selenoprotein and a part of the heparan sulfate 2-sulfotransferase gene (KIAA0448). Contains ESTs, STSs, GSSs and CpG islands, complete sequence Length = 127201 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 500 tcaccatgttgcccaaactg 519 |||||||||||||||||||| Sbjct: 62104 tcaccatgttgcccaaactg 62085
>gb|AC090939.2| Homo sapiens chromosome 3 clone RP11-127I14 map 3p, complete sequence Length = 161366 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 500 tcaccatgttgcccaaactg 519 |||||||||||||||||||| Sbjct: 75854 tcaccatgttgcccaaactg 75873
>emb|AL713980.9| Human DNA sequence from clone XXbac-81I18 on chromosome 6, complete sequence Length = 123817 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 500 tcaccatgttgcccaaactg 519 |||||||||||||||||||| Sbjct: 94779 tcaccatgttgcccaaactg 94798
>emb|AL663038.7| Human DNA sequence from clone XXbac-47E12 on chromosome 6, complete sequence Length = 151964 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 500 tcaccatgttgcccaaactg 519 |||||||||||||||||||| Sbjct: 16817 tcaccatgttgcccaaactg 16836 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,202,906 Number of Sequences: 3902068 Number of extensions: 5202906 Number of successful extensions: 129611 Number of sequences better than 10.0: 98 Number of HSP's better than 10.0 without gapping: 99 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 129073 Number of HSP's gapped (non-prelim): 538 length of query: 522 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 499 effective length of database: 17,143,297,704 effective search space: 8554505554296 effective search space used: 8554505554296 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)