>gb|AY107437.1| Zea mays PCO062669 mRNA sequence
          Length = 1217

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 56/64 (87%), Gaps = 1/64 (1%)
 Strand = Plus / Minus

                                                                       
Query: 427 cccaaacctaacagcagcacttgctatgcttccaagaccaccattctccaaaagaaattt 486
           ||||||||||| ||||||  |||  ||||||| ||||||||||| || ||||||||||||
Sbjct: 679 cccaaacctaagagcagccattgtcatgcttcaaagaccaccatgct-caaaagaaattt 621

               
Query: 487 aaca 490
           ||||
Sbjct: 620 aaca 617

>gb|AY360391.1| Oryza sativa (japonica cultivar-group) chromosome 8 BAC OSJNBa0023H09,
             complete sequence
          Length = 178320

 Score = 44.1 bits (22), Expect = 0.53
 Identities = 37/42 (88%)
 Strand = Plus / Minus

                                                       
Query: 442   agcacttgctatgcttccaagaccaccattctccaaaagaaa 483
             |||||||| |||||||||||||| | |||  |||||||||||
Sbjct: 21416 agcacttgttatgcttccaagacaagcatcttccaaaagaaa 21375

>gb|AY360390.1| Oryza sativa (japonica cultivar-group) chromosome 8 BAC OSJNBa0074N12,
             complete sequence
          Length = 187972

 Score = 44.1 bits (22), Expect = 0.53
 Identities = 37/42 (88%)
 Strand = Plus / Plus

                                                       
Query: 442   agcacttgctatgcttccaagaccaccattctccaaaagaaa 483
             |||||||| |||||||||||||| | |||  |||||||||||
Sbjct: 55519 agcacttgttatgcttccaagacaagcatcttccaaaagaaa 55560

>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 44.1 bits (22), Expect = 0.53
 Identities = 37/42 (88%)
 Strand = Plus / Plus

                                                          
Query: 442      agcacttgctatgcttccaagaccaccattctccaaaagaaa 483
                |||||||| |||||||||||||| | |||  |||||||||||
Sbjct: 12718340 agcacttgttatgcttccaagacaagcatcttccaaaagaaa 12718381

>dbj|AP005166.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OSJNBa0058D03
          Length = 184235

 Score = 44.1 bits (22), Expect = 0.53
 Identities = 37/42 (88%)
 Strand = Plus / Plus

                                                       
Query: 442   agcacttgctatgcttccaagaccaccattctccaaaagaaa 483
             |||||||| |||||||||||||| | |||  |||||||||||
Sbjct: 62335 agcacttgttatgcttccaagacaagcatcttccaaaagaaa 62376

>dbj|AP005162.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
              clone:OSJNBa0051M20
          Length = 152702

 Score = 44.1 bits (22), Expect = 0.53
 Identities = 37/42 (88%)
 Strand = Plus / Plus

                                                        
Query: 442    agcacttgctatgcttccaagaccaccattctccaaaagaaa 483
              |||||||| |||||||||||||| | |||  |||||||||||
Sbjct: 104309 agcacttgttatgcttccaagacaagcatcttccaaaagaaa 104350

>dbj|AK105754.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-202-C07, full
            insert sequence
          Length = 3365

 Score = 44.1 bits (22), Expect = 0.53
 Identities = 37/42 (88%)
 Strand = Plus / Minus

                                                      
Query: 442  agcacttgctatgcttccaagaccaccattctccaaaagaaa 483
            |||||||| |||||||||||||| | |||  |||||||||||
Sbjct: 2812 agcacttgttatgcttccaagacaagcatcttccaaaagaaa 2771

>dbj|AK100410.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023087H17, full
            insert sequence
          Length = 4003

 Score = 44.1 bits (22), Expect = 0.53
 Identities = 37/42 (88%)
 Strand = Plus / Minus

                                                      
Query: 442  agcacttgctatgcttccaagaccaccattctccaaaagaaa 483
            |||||||| |||||||||||||| | |||  |||||||||||
Sbjct: 3522 agcacttgttatgcttccaagacaagcatcttccaaaagaaa 3481

>gb|AC120193.4| Homo sapiens chromosome 8, clone RP11-10H17, complete sequence
          Length = 174556

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 387    caccctccaacctccaactggcccc 411
              ||||||||| |||||||||||||||
Sbjct: 115069 caccctccaccctccaactggcccc 115045

>gb|AC024958.8| Homo sapiens, clone RP11-561E1, complete sequence
          Length = 190534

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 387    caccctccaacctccaactggcccc 411
              ||||||||| |||||||||||||||
Sbjct: 143834 caccctccaccctccaactggcccc 143858

>gb|AC099025.2| Drosophila melanogaster clone BACR04O19, complete sequence
          Length = 160827

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 67    caacagcaaatcgcaaacat 86
             ||||||||||||||||||||
Sbjct: 72539 caacagcaaatcgcaaacat 72558

>gb|AC024218.17| Homo sapiens 3 BAC RP11-668N23 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 141860

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 489    cactatgaaagggctgcagg 508
              ||||||||||||||||||||
Sbjct: 110312 cactatgaaagggctgcagg 110293

>gb|AC087237.14| Homo sapiens 12p BAC RP11-405A12 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 166380

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 473    tccaaaagaaatttaacact 492
              ||||||||||||||||||||
Sbjct: 133338 tccaaaagaaatttaacact 133357

>emb|AJ621740.1| Gallus gallus GMCSF gene for granulocyte-macrophage colony-stimulating
             factor and IL3 gene for interleukin-3, BAC bCHORI92M14
             clone, contig 1
          Length = 54760

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 208   caccacagcagccacacact 227
             ||||||||||||||||||||
Sbjct: 21076 caccacagcagccacacact 21095

>emb|CR388089.8| Zebrafish DNA sequence from clone CH211-87C14, complete sequence
          Length = 165808

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 240 tatggtagacagtttatcca 259
           ||||||||||||||||||||
Sbjct: 205 tatggtagacagtttatcca 186

>ref|NM_137238.2| Drosophila melanogaster SP2353 CG8403-RA (SP2353), mRNA
          Length = 5166

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 67   caacagcaaatcgcaaacat 86
            ||||||||||||||||||||
Sbjct: 1639 caacagcaaatcgcaaacat 1658

>ref|NM_079010.2| Drosophila melanogaster Argonaute 1 CG6671-RB, transcript variant B
           (AGO1), mRNA
          Length = 4576

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 210 ccacagcagccacacactgg 229
           ||||||||||||||||||||
Sbjct: 27  ccacagcagccacacactgg 8

>gb|AC019163.8| Homo sapiens BAC clone RP11-87F15 from 4, complete sequence
          Length = 217921

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 386   tcaccctccaacctccaactggccccgg 413
             ||||||||||||| || |||||||||||
Sbjct: 31804 tcaccctccaaccccccactggccccgg 31831

>emb|BX247906.8| Zebrafish DNA sequence from clone DKEY-9O22 in linkage group 24, complete
              sequence
          Length = 213917

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 458    ccaagaccaccattctccaa 477
              ||||||||||||||||||||
Sbjct: 124779 ccaagaccaccattctccaa 124798

>gb|AC160823.2| Xenopus tropicalis BMP4 gene, complete cds, complete sequence
          Length = 67072

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 195   ggcatttagtttccaccacagcag 218
             ||||||||||||||||||| ||||
Sbjct: 59030 ggcatttagtttccaccactgcag 59007

>emb|BX296548.20| Pig DNA sequence from clone PigE-193I9, complete sequence
          Length = 172252

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 391  ctccaacctccaactggccc 410
            ||||||||||||||||||||
Sbjct: 6302 ctccaacctccaactggccc 6321

>gb|AC007851.6|AC007851 Drosophila melanogaster, chromosome 2R, region 50C-50D, BAC clone
             BACR06M19, complete sequence
          Length = 183161

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 210   ccacagcagccacacactgg 229
             ||||||||||||||||||||
Sbjct: 77048 ccacagcagccacacactgg 77029

>gb|AC008073.4| Homo sapiens BAC clone RP11-507M3 from 2, complete sequence
          Length = 166660

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 473   tccaaaagaaatttaacact 492
             ||||||||||||||||||||
Sbjct: 53545 tccaaaagaaatttaacact 53526

>ref|XM_228073.3| PREDICTED: Rattus norvegicus protein O-fucosyltransferase 2
            (predicted) (Pofut2_predicted), mRNA
          Length = 2484

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 218  gccacacactggccattctc 237
            ||||||||||||||||||||
Sbjct: 1894 gccacacactggccattctc 1875

>gb|CP000026.1| Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150
          Length = 4585229

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 473    tccaaaagaaatttaacact 492
              ||||||||||||||||||||
Sbjct: 869791 tccaaaagaaatttaacact 869772

>gb|AF239610.1|AF239610 Drosophila melanogaster SP2353 mRNA, complete cds
          Length = 5166

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 67   caacagcaaatcgcaaacat 86
            ||||||||||||||||||||
Sbjct: 1639 caacagcaaatcgcaaacat 1658

>gb|AC158911.7| Mus musculus chromosome 5, clone RP24-363D4, complete sequence
          Length = 119381

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 356   ttcatccccatcaaacagtccaaa 379
             ||||||||||| ||||||||||||
Sbjct: 74777 ttcatccccataaaacagtccaaa 74754

>gb|AE003816.4| Drosophila melanogaster chromosome 2R, section 34 of 73 of the complete
             sequence
          Length = 287287

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 210   ccacagcagccacacactgg 229
             ||||||||||||||||||||
Sbjct: 95192 ccacagcagccacacactgg 95211

>gb|AE003808.4| Drosophila melanogaster chromosome 2R, section 42 of 73 of the complete
             sequence
          Length = 260367

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 67    caacagcaaatcgcaaacat 86
             ||||||||||||||||||||
Sbjct: 98794 caacagcaaatcgcaaacat 98813

>gb|CP000209.1| Drosophila melanogaster genomic scaffold 211000022280773
          Length = 49681

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 438   cagcagcacttgctatgctt 457
             ||||||||||||||||||||
Sbjct: 23045 cagcagcacttgctatgctt 23026

>gb|AC004305.1|AC004305 Drosophila melanogaster DNA sequence (P1 DS04822 (D197)), complete
             sequence
          Length = 38205

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 67    caacagcaaatcgcaaacat 86
             ||||||||||||||||||||
Sbjct: 12959 caacagcaaatcgcaaacat 12940

>dbj|AB035447.1| Drosophila melanogaster dAGO1 mRNA for argonaute protein, complete
           cds
          Length = 3586

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 210 ccacagcagccacacactgg 229
           ||||||||||||||||||||
Sbjct: 27  ccacagcagccacacactgg 8


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,425,115
Number of Sequences: 3902068
Number of extensions: 4425115
Number of successful extensions: 80260
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 32
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 80166
Number of HSP's gapped (non-prelim): 93
length of query: 603
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 580
effective length of database: 17,143,297,704
effective search space: 9943112668320
effective search space used: 9943112668320
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)