| Clone Name | rbags25n10 |
|---|---|
| Clone Library Name | barley_pub |
>TLC1_SOLTU (O24381) Plastidic ATP/ADP-transporter| Length = 631 Score = 191 bits (484), Expect = 2e-48 Identities = 97/135 (71%), Positives = 112/135 (82%), Gaps = 1/135 (0%) Frame = -1 Query: 623 VYVGALQNIFSKSAKYSLFDPCKEMAYIPLDGDMKLKGKAAIDVVCNPLGKSGGALIQQF 444 VYVGA+QNIFSKSAKYSLFDPCKEMAYIPLD D K+KGKAAIDVVCNPLGKSGGALIQQF Sbjct: 476 VYVGAMQNIFSKSAKYSLFDPCKEMAYIPLDEDTKVKGKAAIDVVCNPLGKSGGALIQQF 535 Query: 443 LILIFGSLANSTPYLGGILLVIVLAWLGAARSLDKQFSSL-AKEDLRKEMSKEKVETATP 267 +IL FGSLA+STPYLGG+LLVIVLAWLGAA+SLD QF+ L +EDL KEM + ++ Sbjct: 536 MILTFGSLASSTPYLGGVLLVIVLAWLGAAKSLDGQFTQLRQEEDLEKEMERASLKIPVV 595 Query: 266 KESEAATDVLVEQSN 222 ++E L +S+ Sbjct: 596 SQNENGNGPLSSESS 610
>TLC1_ARATH (Q39002) Chloroplast ADP,ATP carrier protein 1, chloroplast| precursor (ADP/ATP translocase 1) (Adenine nucleotide translocase 1) Length = 624 Score = 182 bits (461), Expect = 9e-46 Identities = 97/126 (76%), Positives = 107/126 (84%), Gaps = 4/126 (3%) Frame = -1 Query: 623 VYVGALQNIFSKSAKYSLFDPCKEMAYIPLDGDMKLKGKAAIDVVCNPLGKSGGALIQQF 444 VYVGALQNIFSKSAKYSLFDPCKEMAYIPLD D K+KGKAAIDVVCNPLGKSGGALIQQF Sbjct: 478 VYVGALQNIFSKSAKYSLFDPCKEMAYIPLDEDTKVKGKAAIDVVCNPLGKSGGALIQQF 537 Query: 443 LILIFGSLANSTPYLGGILLVIVLAWLGAARSLDKQFSSL-AKEDLRKEM---SKEKVET 276 +IL FGSLANSTPYLG ILLVIV AWL AA+SL+ QF+SL ++E+L KEM S K+ Sbjct: 538 MILSFGSLANSTPYLGMILLVIVTAWLAAAKSLEGQFNSLRSEEELEKEMERASSVKIPV 597 Query: 275 ATPKES 258 + ES Sbjct: 598 VSQDES 603
>TLC2_ARATH (P92935) Chloroplast ADP,ATP carrier protein 2, chloroplast| precursor (ADP/ATP translocase 2) (Adenine nucleotide translocase 2) Length = 618 Score = 177 bits (448), Expect = 3e-44 Identities = 90/112 (80%), Positives = 101/112 (90%), Gaps = 1/112 (0%) Frame = -1 Query: 623 VYVGALQNIFSKSAKYSLFDPCKEMAYIPLDGDMKLKGKAAIDVVCNPLGKSGGALIQQF 444 VYVGALQNIFSKSAKYSLFDPCKEMAYIPLD D K+KGKAAIDVVCNPLGKSGGALIQQF Sbjct: 475 VYVGALQNIFSKSAKYSLFDPCKEMAYIPLDEDTKVKGKAAIDVVCNPLGKSGGALIQQF 534 Query: 443 LILIFGSLANSTPYLGGILLVIVLAWLGAARSLDKQFSSL-AKEDLRKEMSK 291 +IL FGSLANSTPYLG ILL IV AWL AA+SL+ QF++L ++E+L +EM + Sbjct: 535 MILTFGSLANSTPYLGVILLGIVTAWLAAAKSLEGQFNTLMSEEELEREMER 586
>TLC1_CHLTR (O84068) ADP,ATP carrier protein 1 (ADP/ATP translocase 1)| Length = 528 Score = 122 bits (306), Expect = 9e-28 Identities = 68/130 (52%), Positives = 89/130 (68%), Gaps = 3/130 (2%) Frame = -1 Query: 623 VYVGALQNIFSKSAKYSLFDPCKEMAYIPLDGDMKLKGKAAIDVVCNPLGKSGGALIQQF 444 V VGA+QNI SKS KY+LFD KEMAYIPLD + K+KGKAAIDVV GKSGG+LIQQ Sbjct: 396 VVVGAIQNILSKSTKYALFDATKEMAYIPLDQEQKVKGKAAIDVVAARFGKSGGSLIQQG 455 Query: 443 LILIFGSLANSTPYLGGILLVIVLAWLGAARSLDKQF--SSLAKE-DLRKEMSKEKVETA 273 L+++ GS+ TP+L L I++ WL +A L+K F +S AKE +L + + EK ++ Sbjct: 456 LLVVCGSIGAMTPFLAVALFAIIMVWLTSATKLNKLFLAASAAKEQELAEAAAAEKEASS 515 Query: 272 TPKESEAATD 243 KES A + Sbjct: 516 AAKESAPAIE 525
>TLC1_CHLPN (Q9Z8J2) ADP,ATP carrier protein 1 (ADP/ATP translocase 1)| Length = 515 Score = 120 bits (301), Expect = 3e-27 Identities = 66/113 (58%), Positives = 82/113 (72%), Gaps = 3/113 (2%) Frame = -1 Query: 623 VYVGALQNIFSKSAKYSLFDPCKEMAYIPLDGDMKLKGKAAIDVVCNPLGKSGGALIQQF 444 V VGA+QNI SKS KY+LFD KEMAYIPLD + K+KGKAAIDVV GKSGGALIQQ Sbjct: 398 VVVGAIQNILSKSTKYALFDSTKEMAYIPLDQEQKVKGKAAIDVVAARFGKSGGALIQQG 457 Query: 443 LILIFGSLANSTPYLGGILLVIVLAWLGAARSLDKQF---SSLAKEDLRKEMS 294 L++I GS+ TPYL ILL I+ WL +A L+K F S+L ++++ +E S Sbjct: 458 LLVICGSIGAMTPYLAVILLFIIAIWLVSATKLNKLFLAQSALKEQEVAQEDS 510
>TLC1_CHLMU (Q9PKX5) ADP,ATP carrier protein 1 (ADP/ATP translocase 1)| Length = 529 Score = 119 bits (299), Expect = 6e-27 Identities = 65/127 (51%), Positives = 85/127 (66%), Gaps = 2/127 (1%) Frame = -1 Query: 623 VYVGALQNIFSKSAKYSLFDPCKEMAYIPLDGDMKLKGKAAIDVVCNPLGKSGGALIQQF 444 V VGA+QNI SKS KY+LFD KEMAYIPLD + K+KGKAAIDVV GKSGG+LIQQ Sbjct: 396 VVVGAVQNILSKSTKYALFDATKEMAYIPLDQEQKVKGKAAIDVVAARFGKSGGSLIQQG 455 Query: 443 LILIFGSLANSTPYLGGILLVIVLAWLGAARSLDKQF--SSLAKEDLRKEMSKEKVETAT 270 L+++ GS++ TP+L L I++ WL +A L+K F +S AKE E + + A+ Sbjct: 456 LLVVCGSISAMTPFLAVALFAIIMVWLTSATKLNKLFLAASAAKEQELAEATAAAEKEAS 515 Query: 269 PKESEAA 249 P E + Sbjct: 516 PAAKEVS 522
>TLCA_RICPR (P19568) ADP,ATP carrier protein 1 (ADP/ATP translocase 1)| Length = 498 Score = 102 bits (253), Expect = 1e-21 Identities = 47/106 (44%), Positives = 70/106 (66%), Gaps = 2/106 (1%) Frame = -1 Query: 623 VYVGALQNIFSKSAKYSLFDPCKEMAYIPLDGDMKLKGKAAIDVVCNPLGKSGGALIQQF 444 V +G +QN+ SK KYSLFD K MAYIPLD D+++KG+AA++V+ LGKSGGA+IQ Sbjct: 391 VMIGMIQNVLSKGVKYSLFDATKNMAYIPLDKDLRVKGQAAVEVIGGRLGKSGGAIIQST 450 Query: 443 LILIFG--SLANSTPYLGGILLVIVLAWLGAARSLDKQFSSLAKED 312 ++F +TPY I +IV+ W+ A + L+K++ L ++ Sbjct: 451 FFILFPVFGFIEATPYFASIFFIIVILWIFAVKGLNKEYQVLVNKN 496
>TLC2_CHLPN (Q9Z7U0) ADP,ATP carrier protein 2 (ADP/ATP translocase 2)| Length = 540 Score = 90.1 bits (222), Expect = 5e-18 Identities = 44/126 (34%), Positives = 78/126 (61%) Frame = -1 Query: 620 YVGALQNIFSKSAKYSLFDPCKEMAYIPLDGDMKLKGKAAIDVVCNPLGKSGGALIQQFL 441 + G +QN+ S+ K++ FD KEMA+IPL + K GKAAID V + +GKSGG+LI Q L Sbjct: 408 WTGGMQNVLSRGTKFTFFDQTKEMAFIPLSPEDKNHGKAAIDGVVSRIGKSGGSLIYQGL 467 Query: 440 ILIFGSLANSTPYLGGILLVIVLAWLGAARSLDKQFSSLAKEDLRKEMSKEKVETATPKE 261 ++IF S+A S + +LL+I++ W+ + K++ S A + + ++ ++ +E Sbjct: 468 LVIFSSVAASLNVIALVLLIIMVVWIAVVAYIGKEYYSRAADAVATLKQPKEPSSSIVRE 527 Query: 260 SEAATD 243 ++ + + Sbjct: 528 AQESVE 533
>TLC2_CHLTR (O84502) ADP,ATP carrier protein 2 (ADP/ATP translocase 2)| Length = 540 Score = 89.0 bits (219), Expect = 1e-17 Identities = 50/130 (38%), Positives = 84/130 (64%) Frame = -1 Query: 620 YVGALQNIFSKSAKYSLFDPCKEMAYIPLDGDMKLKGKAAIDVVCNPLGKSGGALIQQFL 441 ++G +QN+FS++ K++ FD KEMA+IPL+ D K GKAAID V + +GKSGG+L+ Q L Sbjct: 405 WLGGVQNVFSRAIKFTYFDQTKEMAFIPLEDDEKNYGKAAIDGVISRVGKSGGSLVYQGL 464 Query: 440 ILIFGSLANSTPYLGGILLVIVLAWLGAARSLDKQFSSLAKEDLRKEMSKEKVETATPKE 261 ++IF S+A S + +LL+ + +W+ L +++++ + R +S+E V +E Sbjct: 465 LIIFSSVAASLNAITIVLLLALGSWIFVIAWLGREYTAKTEALFRVNVSEEDV---LQEE 521 Query: 260 SEAATDVLVE 231 EA++ V E Sbjct: 522 REASSLVDAE 531 Score = 29.3 bits (64), Expect = 9.9 Identities = 24/90 (26%), Positives = 40/90 (44%), Gaps = 11/90 (12%) Frame = -1 Query: 464 GALIQQFLILIFGSLANSTPY--------LGGILLV---IVLAWLGAARSLDKQFSSLAK 318 GAL+ +LI G+L Y GGIL + ++ AWLG +++ + Sbjct: 362 GALVPPLTMLITGALFFGAIYAVKGDAMIFGGILGISPLVLTAWLGGVQNVFSRAIKFTY 421 Query: 317 EDLRKEMSKEKVETATPKESEAATDVLVEQ 228 D KEM+ +E +AA D ++ + Sbjct: 422 FDQTKEMAFIPLEDDEKNYGKAAIDGVISR 451
>TLCD_RICPR (Q9ZD47) ADP,ATP carrier protein 4 (ADP/ATP translocase 4)| Length = 512 Score = 88.2 bits (217), Expect = 2e-17 Identities = 44/104 (42%), Positives = 69/104 (66%), Gaps = 2/104 (1%) Frame = -1 Query: 623 VYVGALQNIFSKSAKYSLFDPCKEMAYIPLDGDMKLKGKAAIDVVCNPLGKSGGALIQQ- 447 + +GA+QN+ SKS+KY+LFD KEMAY+PL+ ++K+ GKAA DV+ LGKSG A +Q Sbjct: 405 ITIGAIQNVLSKSSKYTLFDSTKEMAYVPLEPEIKISGKAAADVIGTKLGKSGSAFLQSL 464 Query: 446 -FLILIFGSLANSTPYLGGILLVIVLAWLGAARSLDKQFSSLAK 318 F+IL S + + L I ++ + W+ A + L+K++ + K Sbjct: 465 IFIILPSASYQSISICLMIIFILTCVTWIWATKELNKEYKNSIK 508
>TLC2_CHLMU (Q9PJP6) ADP,ATP carrier protein 2 (ADP/ATP translocase 2)| Length = 543 Score = 86.3 bits (212), Expect = 7e-17 Identities = 47/127 (37%), Positives = 78/127 (61%) Frame = -1 Query: 620 YVGALQNIFSKSAKYSLFDPCKEMAYIPLDGDMKLKGKAAIDVVCNPLGKSGGALIQQFL 441 ++G +QN+FS++ K++ FD KEMA+IPL+ D K GKAAID V + +GKSGG+L+ Q L Sbjct: 405 WLGGVQNVFSRAIKFTYFDQTKEMAFIPLEDDEKDYGKAAIDGVISRVGKSGGSLVYQAL 464 Query: 440 ILIFGSLANSTPYLGGILLVIVLAWLGAARSLDKQFSSLAKEDLRKEMSKEKVETATPKE 261 ++IF S+A+ + +LL+ + W+ L K++ S+ L K + E+ E Sbjct: 465 LIIFSSVADCMNAITIVLLLALGGWIWVVAWLGKEY-SVRTAALGKARAAEEPSLQDEDE 523 Query: 260 SEAATDV 240 S ++ + Sbjct: 524 SRVSSPI 530
>TLCB_RICPR (Q9ZDF2) ADP,ATP carrier protein 2 (ADP/ATP translocase 2)| Length = 507 Score = 84.7 bits (208), Expect = 2e-16 Identities = 44/106 (41%), Positives = 68/106 (64%), Gaps = 4/106 (3%) Frame = -1 Query: 623 VYVGALQNIFSKSAKYSLFDPCKEMAYIPLDGDMKLKGKAAIDVVCNPLGKSGGALIQQF 444 V++G L ++F+KS KYSLFD KEM YIPLD ++K KGKAA+DV+ +GKS GA+IQ Sbjct: 403 VFIGGLWHVFAKSVKYSLFDATKEMVYIPLDNEIKTKGKAAVDVMGAKIGKSIGAIIQFI 462 Query: 443 LILIFGSLANSTPYLGGILLV----IVLAWLGAARSLDKQFSSLAK 318 IF + ++ + G+L+V + + WL + L + ++ + K Sbjct: 463 SFSIFPNAVHND--IAGLLMVTFIIVCILWLYGVKVLSQNYNKMIK 506
>TLCC_RICPR (Q9ZD67) ADP,ATP carrier protein 3 (ADP/ATP translocase 3)| Length = 501 Score = 84.0 bits (206), Expect = 3e-16 Identities = 46/104 (44%), Positives = 67/104 (64%), Gaps = 2/104 (1%) Frame = -1 Query: 623 VYVGALQNIFSKSAKYSLFDPCKEMAYIPLDGDMKLKGKAAIDVVCNPLGKSGGALIQQ- 447 + VGA+QNI SKS+KYSLFD KEMAYIPL +++ KGKAA++V+ GKS GA IQ Sbjct: 398 IIVGAIQNILSKSSKYSLFDSTKEMAYIPLSLELRTKGKAAVEVIGTKFGKSLGAFIQSL 457 Query: 446 -FLILIFGSLANSTPYLGGILLVIVLAWLGAARSLDKQFSSLAK 318 F+I+ + + YL I +V++ W+ L+K++ L + Sbjct: 458 IFIIIPTATFDSIIIYLLVIFIVMMNLWIWNIIKLNKEYIKLCQ 501
>TLCE_RICPR (O05962) ADP,ATP carrier protein 5 (ADP/ATP translocase 5)| Length = 500 Score = 79.3 bits (194), Expect = 8e-15 Identities = 38/103 (36%), Positives = 62/103 (60%), Gaps = 2/103 (1%) Frame = -1 Query: 623 VYVGALQNIFSKSAKYSLFDPCKEMAYIPLDGDMKLKGKAAIDVVCNPLGKSGGALIQQ- 447 V +G +QNI +K KYS++D +EM YIPLD ++K KGKAA+DV+ +GKS L+Q Sbjct: 398 VSIGGIQNILAKGTKYSIWDTSREMLYIPLDDELKTKGKAAVDVISAKVGKSSSGLVQSI 457 Query: 446 -FLILIFGSLANSTPYLGGILLVIVLAWLGAARSLDKQFSSLA 321 F ++ + + +P L + + AW+ A R + ++ +A Sbjct: 458 IFTLVPNATFTSISPILMVVFTFVCFAWIYAVRKIYFEYQKIA 500
>OTX1_MOUSE (P80205) Homeobox protein OTX1| Length = 355 Score = 28.5 bits (62), Expect(2) = 1.0 Identities = 18/72 (25%), Positives = 33/72 (45%) Frame = +2 Query: 407 ASSLPKSQISGSETVGSAHHRTCPMGCRQHQWLPFPSTSYLHPKEYRPFLCTGRINCTLH 586 AS + +S +G+ T +++ + G Q P PS+SY G ++C+ + Sbjct: 203 ASCMQRSVAAGAATAAASYPMSYGQGGSYGQGYPAPSSSYF-----------GGVDCSSY 251 Query: 587 SC*ICSAGHPHK 622 + S HPH+ Sbjct: 252 LAPMHSHHHPHQ 263 Score = 22.7 bits (47), Expect(2) = 1.0 Identities = 15/49 (30%), Positives = 23/49 (46%) Frame = +1 Query: 247 VAASDSLGVAVSTFSFDISFRRSSLAKLENCLSNDLAAPSHASTMTNSI 393 VAA+ SL ++ + + A + LAAPS+AS M S+ Sbjct: 162 VAAASSLSTPTASSIWSPASISPGSAPTSVSVPEPLAAPSNASCMQRSV 210
>D153_HAEIN (O32629) Protective surface antigen D15 precursor (80 kDa D15| antigen) (D-15-Ag) (Outer membrane protein D15) Length = 793 Score = 30.8 bits (68), Expect = 3.4 Identities = 15/47 (31%), Positives = 24/47 (51%) Frame = +1 Query: 256 SDSLGVAVSTFSFDISFRRSSLAKLENCLSNDLAAPSHASTMTNSIP 396 S L +S + +FRRS +A +EN + L + +T NS+P Sbjct: 277 SAELEPLLSALHLNDTFRRSDIADVENAIKAKLGERGYGNTTVNSVP 323
>D151_HAEIN (P46024) Protective surface antigen D15 precursor (80 kDa D15| antigen) (D-15-Ag) (Outer membrane protein D15) Length = 797 Score = 30.0 bits (66), Expect = 5.8 Identities = 15/47 (31%), Positives = 23/47 (48%) Frame = +1 Query: 256 SDSLGVAVSTFSFDISFRRSSLAKLENCLSNDLAAPSHASTMTNSIP 396 S L +S + +FRRS +A +EN + L + S NS+P Sbjct: 277 SAELEPLLSALHLNDTFRRSDIADVENAIKAKLGERGYGSATVNSVP 323
>D152_HAEIN (P44935) Protective surface antigen D15 precursor (80 kDa D15| antigen) (D-15-Ag) (Outer membrane protein D15) Length = 795 Score = 30.0 bits (66), Expect = 5.8 Identities = 15/47 (31%), Positives = 23/47 (48%) Frame = +1 Query: 256 SDSLGVAVSTFSFDISFRRSSLAKLENCLSNDLAAPSHASTMTNSIP 396 S L +S + +FRRS +A +EN + L + S NS+P Sbjct: 277 SAELEPLLSALHLNDTFRRSDIADVENAIKAKLGERGYGSATVNSVP 323
>CAD10_HUMAN (Q9Y6N8) Cadherin-10 precursor (T2-cadherin)| Length = 788 Score = 29.6 bits (65), Expect = 7.6 Identities = 24/77 (31%), Positives = 35/77 (45%) Frame = -1 Query: 482 PLGKSGGALIQQFLILIFGSLANSTPYLGGILLVIVLAWLGAARSLDKQFSSLAKEDLRK 303 P G S GALI L +I ILLVIV+ + R K+ L+KED+R Sbjct: 606 PAGLSTGALIAILLCII-------------ILLVIVVLFAALKRQRKKEPLILSKEDIRD 652 Query: 302 EMSKEKVETATPKESEA 252 + E ++++A Sbjct: 653 NIVSYNDEGGGEEDTQA 669
>CAD10_CHICK (P79995) Cadherin-10 precursor| Length = 789 Score = 29.6 bits (65), Expect = 7.6 Identities = 24/77 (31%), Positives = 35/77 (45%) Frame = -1 Query: 482 PLGKSGGALIQQFLILIFGSLANSTPYLGGILLVIVLAWLGAARSLDKQFSSLAKEDLRK 303 P G S GALI L +I ILLVIV+ + R K+ L+KED+R Sbjct: 606 PAGLSTGALIAILLCII-------------ILLVIVVLFAALKRQRKKEPLILSKEDIRD 652 Query: 302 EMSKEKVETATPKESEA 252 + E ++++A Sbjct: 653 NIVSYNDEGGGEEDTQA 669
>ESCA_DROME (P25932) Protein escargot (Protein fleabag)| Length = 470 Score = 29.6 bits (65), Expect = 7.6 Identities = 20/44 (45%), Positives = 26/44 (59%) Frame = +2 Query: 383 PTVYRQGRASSLPKSQISGSETVGSAHHRTCPMGCRQHQWLPFP 514 P Y GRASS+ S SE + HR P+G RQH++LP+P Sbjct: 177 PHHYLHGRASSV--SPPMRSEII----HR--PIGVRQHRFLPYP 212
>DTD1_MOUSE (Q9DD18) Probable D-tyrosyl-tRNA(Tyr) deacylase (EC 3.1.-.-)| Length = 201 Score = 29.3 bits (64), Expect = 9.9 Identities = 16/37 (43%), Positives = 21/37 (56%) Frame = -1 Query: 362 GAARSLDKQFSSLAKEDLRKEMSKEKVETATPKESEA 252 GAA S KQ S L K+ RKE ++ K + + KE A Sbjct: 151 GAASSDPKQLSKLEKQQQRKEKTRAKGPSESSKERNA 187
>A4_PIG (P79307) Amyloid beta A4 protein precursor (APP) (ABPP) (Alzheimer| disease amyloid protein homolog) [Contains: Soluble APP-alpha (S-APP-alpha); Soluble APP-beta (S-APP-beta); C99; Beta-amyloid protein 42 (Beta-APP42); Beta-amyloid protein 40 (Beta Length = 770 Score = 29.3 bits (64), Expect = 9.9 Identities = 12/27 (44%), Positives = 17/27 (62%) Frame = -3 Query: 372 CMARCGKIIGQAILKLGQRGSPKGDVK 292 CMA CG ++ Q++LK Q P+ VK Sbjct: 337 CMAVCGSVMSQSLLKTTQEHLPQDPVK 363 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 87,749,388 Number of Sequences: 219361 Number of extensions: 1755848 Number of successful extensions: 5028 Number of sequences better than 10.0: 23 Number of HSP's better than 10.0 without gapping: 4858 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5023 length of database: 80,573,946 effective HSP length: 107 effective length of database: 57,102,319 effective search space used: 5710231900 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)