ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags25n04
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1UPTG_MAIZE (P80607) Alpha-1,4-glucan-protein synthase [UDP-formi... 298 8e-81
2UPTG_PEA (O04300) Alpha-1,4-glucan-protein synthase [UDP-forming... 286 6e-77
3UPTG2_SOLTU (Q8RU27) Alpha-1,4-glucan-protein synthase [UDP-form... 285 1e-76
4UPTG1_SOLTU (Q9SC19) Alpha-1,4-glucan-protein synthase [UDP-form... 279 7e-75
5CISY3_YEAST (P43635) Citrate synthase 3 (EC 2.3.3.1) 33 0.84
6FBIC_MYCPA (Q73WP9) FO synthase (EC 2.5.1.-) (7,8-didemethyl-8-h... 30 9.3

>UPTG_MAIZE (P80607) Alpha-1,4-glucan-protein synthase [UDP-forming] (EC|
           2.4.1.112) (UDP-glucose:protein transglucosylase) (UPTG)
           (Amylogenin) (Golgi-associated protein se-wap41)
          Length = 364

 Score =  298 bits (764), Expect = 8e-81
 Identities = 135/147 (91%), Positives = 140/147 (95%)
 Frame = -1

Query: 701 KGTLFPMCGMNLAFDRQLIGPAMYFGLMGDGQPIGRYDDMWAGWCVKVICDHLSLGVKTG 522
           KGTLFPMCGMNLAFDR LIGPAMYFGLMGDGQPIGRYDDMWAGWCVKVICDHLSLGVKTG
Sbjct: 208 KGTLFPMCGMNLAFDRDLIGPAMYFGLMGDGQPIGRYDDMWAGWCVKVICDHLSLGVKTG 267

Query: 521 LPYLWHSKASNPFVNLKKEYKGIFWQEDIIPFFQNATLSKECDTVQKCYISLSEQVREKL 342
           LPY+WHSKASNPFVNLKKEYKGIFWQEDIIPFFQN T+ K+CDTVQKCYI LS QV+EKL
Sbjct: 268 LPYIWHSKASNPFVNLKKEYKGIFWQEDIIPFFQNVTIPKDCDTVQKCYIYLSGQVKEKL 327

Query: 341 GKIDPYFLKLADAMVTWIEAWDELNPS 261
           G IDPYF+KL DAMVTWIEAWDELNPS
Sbjct: 328 GTIDPYFVKLGDAMVTWIEAWDELNPS 354



to top

>UPTG_PEA (O04300) Alpha-1,4-glucan-protein synthase [UDP-forming] (EC|
           2.4.1.112) (UDP-glucose:protein transglucosylase) (UPTG)
           (Reversibly glycosylated polypeptide)
          Length = 364

 Score =  286 bits (731), Expect = 6e-77
 Identities = 126/145 (86%), Positives = 139/145 (95%)
 Frame = -1

Query: 701 KGTLFPMCGMNLAFDRQLIGPAMYFGLMGDGQPIGRYDDMWAGWCVKVICDHLSLGVKTG 522
           KG+LFPMCGMNLAF+R+LIGPAMYFGLMGDGQPIGRYDDMWAGWC+KVICDHL  GVKTG
Sbjct: 201 KGSLFPMCGMNLAFNRELIGPAMYFGLMGDGQPIGRYDDMWAGWCIKVICDHLGYGVKTG 260

Query: 521 LPYLWHSKASNPFVNLKKEYKGIFWQEDIIPFFQNATLSKECDTVQKCYISLSEQVREKL 342
           LPY+WHSKASNPFVNLKKEYKGIFWQE+IIPFFQ ATLSK+C +VQKCYI LS+QV+EKL
Sbjct: 261 LPYIWHSKASNPFVNLKKEYKGIFWQEEIIPFFQAATLSKDCTSVQKCYIELSKQVKEKL 320

Query: 341 GKIDPYFLKLADAMVTWIEAWDELN 267
           G IDPYF+KLADAMVTW+EAWDE+N
Sbjct: 321 GTIDPYFIKLADAMVTWVEAWDEIN 345



to top

>UPTG2_SOLTU (Q8RU27) Alpha-1,4-glucan-protein synthase [UDP-forming] 2 (EC|
           2.4.1.112) (UDP-glucose:protein transglucosylase 2)
           (UPTG 2)
          Length = 366

 Score =  285 bits (728), Expect = 1e-76
 Identities = 126/147 (85%), Positives = 139/147 (94%)
 Frame = -1

Query: 701 KGTLFPMCGMNLAFDRQLIGPAMYFGLMGDGQPIGRYDDMWAGWCVKVICDHLSLGVKTG 522
           KGTLFPMCGMNLAFDR+LIGPAMYFGLMGDGQPIGRYDDMWAGWC+KVICDHL LGVKTG
Sbjct: 202 KGTLFPMCGMNLAFDRELIGPAMYFGLMGDGQPIGRYDDMWAGWCIKVICDHLGLGVKTG 261

Query: 521 LPYLWHSKASNPFVNLKKEYKGIFWQEDIIPFFQNATLSKECDTVQKCYISLSEQVREKL 342
           LPY+WHSKASNPFVNLKKEYKGI+WQE+IIPF Q+ATL K+C +VQ+CY+ LS+QV+EKL
Sbjct: 262 LPYIWHSKASNPFVNLKKEYKGIYWQEEIIPFSQSATLPKDCTSVQQCYLELSKQVKEKL 321

Query: 341 GKIDPYFLKLADAMVTWIEAWDELNPS 261
             IDPYF KLADAMVTWIEAWDELNP+
Sbjct: 322 STIDPYFTKLADAMVTWIEAWDELNPT 348



to top

>UPTG1_SOLTU (Q9SC19) Alpha-1,4-glucan-protein synthase [UDP-forming] 1 (EC|
           2.4.1.112) (UDP-glucose:protein transglucosylase 1)
           (UPTG 1)
          Length = 365

 Score =  279 bits (713), Expect = 7e-75
 Identities = 124/145 (85%), Positives = 133/145 (91%)
 Frame = -1

Query: 701 KGTLFPMCGMNLAFDRQLIGPAMYFGLMGDGQPIGRYDDMWAGWCVKVICDHLSLGVKTG 522
           KGTLFPMCGMNLAFDR LIGPAMYFGLMGDGQPIGRYDDMWAGWC KVICDHL LG+KTG
Sbjct: 198 KGTLFPMCGMNLAFDRDLIGPAMYFGLMGDGQPIGRYDDMWAGWCTKVICDHLGLGIKTG 257

Query: 521 LPYLWHSKASNPFVNLKKEYKGIFWQEDIIPFFQNATLSKECDTVQKCYISLSEQVREKL 342
           LPY+WHSKASNPFVNLKKEY GIFWQE+IIPFFQ ATL KEC TVQ+CY+ LS+QV++KL
Sbjct: 258 LPYIWHSKASNPFVNLKKEYNGIFWQEEIIPFFQAATLPKECTTVQQCYLELSKQVKKKL 317

Query: 341 GKIDPYFLKLADAMVTWIEAWDELN 267
             IDPYF KL +AMVTWIEAWDELN
Sbjct: 318 SSIDPYFTKLGEAMVTWIEAWDELN 342



to top

>CISY3_YEAST (P43635) Citrate synthase 3 (EC 2.3.3.1)|
          Length = 486

 Score = 33.1 bits (74), Expect = 0.84
 Identities = 22/76 (28%), Positives = 35/76 (46%), Gaps = 2/76 (2%)
 Frame = -1

Query: 674 MNLAFDRQLIGPAMYFGLMGDGQPIGRYDDMWAGWCVKVICDHLSL--GVKTGLPYLWHS 501
           +NL     L+   +Y  +  +G P+G+Y +    WC   IC  L +  G  +       S
Sbjct: 202 LNLIASLPLLTGRIYSNITNEGHPLGQYSEE-VDWCTN-ICSLLGMTNGTNSSNTCNLTS 259

Query: 500 KASNPFVNLKKEYKGI 453
           + S  F+NL + Y GI
Sbjct: 260 QQSLDFINLMRLYTGI 275



to top

>FBIC_MYCPA (Q73WP9) FO synthase (EC 2.5.1.-)|
           (7,8-didemethyl-8-hydroxy-5-deazariboflavin synthase)
          Length = 867

 Score = 29.6 bits (65), Expect = 9.3
 Identities = 13/33 (39%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
 Frame = -3

Query: 264 ICYS*CRCCCW-ERQGSSQVASLGSQECMVTAW 169
           ICY+ CR C + +R+G +   SL ++E    AW
Sbjct: 568 ICYTGCRFCAFAQRKGDADAYSLSTEEVADRAW 600


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 96,132,697
Number of Sequences: 219361
Number of extensions: 1998878
Number of successful extensions: 5136
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 4963
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5131
length of database: 80,573,946
effective HSP length: 109
effective length of database: 56,663,597
effective search space used: 7026286028
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
to top