ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbags25m13 |
|---|---|
| Clone Library Name | barley_pub |
>DIC_MOUSE (Q9QZD8) Mitochondrial dicarboxylate carrier (Solute carrier family| 25 member 10) Length = 287 Score = 39.7 bits (91), Expect = 0.002 Identities = 18/51 (35%), Positives = 29/51 (56%) Frame = -1 Query: 191 KYPYTGSLDCAMQTMKTGGPFKFYSGFXVYCVRIAPHVMMXWLFLNXIQKY 39 K Y G CAM+T K G P F+ G +R+ PH ++ ++FL ++K+ Sbjct: 230 KGEYQGVFHCAMETAKLG-PQAFFKGLFPAGIRLIPHTVLTFMFLEQLRKH 279
>DIC_HUMAN (Q9UBX3) Mitochondrial dicarboxylate carrier (Solute carrier family| 25 member 10) Length = 287 Score = 39.7 bits (91), Expect = 0.002 Identities = 18/50 (36%), Positives = 28/50 (56%) Frame = -1 Query: 191 KYPYTGSLDCAMQTMKTGGPFKFYSGFXVYCVRIAPHVMMXWLFLNXIQK 42 K Y G CA++T K G P FY G +R+ PH ++ ++FL ++K Sbjct: 231 KGEYQGVFHCAVETAKLG-PLAFYKGLVPAGIRLIPHTVLTFVFLEQLRK 279
>OAC1_YEAST (P32332) Mitochondrial oxaloacetate transport protein| (Mitochondrial carrier protein PMT) Length = 324 Score = 39.7 bits (91), Expect = 0.002 Identities = 17/47 (36%), Positives = 24/47 (51%) Frame = -1 Query: 182 YTGSLDCAMQTMKTGGPFKFYSGFXVYCVRIAPHVMMXWLFLNXIQK 42 Y G +DC ++T++ G Y GF RIAPH +M F+ K Sbjct: 265 YKGPIDCLVKTVRIEGVTALYKGFAAQVFRIAPHTIMCLTFMEQTMK 311
>M2OM_MOUSE (Q9CR62) Mitochondrial 2-oxoglutarate/malate carrier protein (OGCP)| (Solute carrier family 25 member 11) Length = 313 Score = 39.7 bits (91), Expect = 0.002 Identities = 16/51 (31%), Positives = 27/51 (52%) Frame = -1 Query: 194 GKYPYTGSLDCAMQTMKTGGPFKFYSGFXVYCVRIAPHVMMXWLFLNXIQK 42 GK Y LD ++ ++ G F + GF Y R+ PH ++ ++FL + K Sbjct: 254 GKPEYKNGLDVLLKVVRYEGFFSLWKGFTPYYARLGPHTVLTFIFLEQMNK 304
>M2OM_BOVIN (P22292) Mitochondrial 2-oxoglutarate/malate carrier protein (OGCP)| (Solute carrier family 25 member 11) Length = 313 Score = 39.3 bits (90), Expect = 0.003 Identities = 16/51 (31%), Positives = 27/51 (52%) Frame = -1 Query: 194 GKYPYTGSLDCAMQTMKTGGPFKFYSGFXVYCVRIAPHVMMXWLFLNXIQK 42 GK Y LD ++ ++ G F + GF Y R+ PH ++ ++FL + K Sbjct: 254 GKPEYKNGLDVLVKVVRYEGFFSLWKGFTPYYARLGPHTVLTFIFLEQMNK 304
>M2OM_HUMAN (Q02978) Mitochondrial 2-oxoglutarate/malate carrier protein (OGCP)| (Solute carrier family 25 member 11) Length = 313 Score = 38.9 bits (89), Expect = 0.004 Identities = 16/51 (31%), Positives = 26/51 (50%) Frame = -1 Query: 194 GKYPYTGSLDCAMQTMKTGGPFKFYSGFXVYCVRIAPHVMMXWLFLNXIQK 42 GK Y LD + ++ G F + GF Y R+ PH ++ ++FL + K Sbjct: 254 GKPEYKNGLDVLFKVVRYEGFFSLWKGFTPYYARLGPHTVLTFIFLEQMNK 304
>M2OM_RAT (P97700) Mitochondrial 2-oxoglutarate/malate carrier protein (OGCP)| (Solute carrier family 25 member 11) Length = 313 Score = 37.4 bits (85), Expect = 0.011 Identities = 15/50 (30%), Positives = 26/50 (52%) Frame = -1 Query: 191 KYPYTGSLDCAMQTMKTGGPFKFYSGFXVYCVRIAPHVMMXWLFLNXIQK 42 K Y LD ++ ++ G F + GF Y R+ PH ++ ++FL + K Sbjct: 255 KPEYKNGLDVLLKVVRYEGFFSLWKGFTPYYARLGPHTVLTFIFLEQMNK 304
>UCP4_HUMAN (O95847) Mitochondrial uncoupling protein 4 (UCP 4) (Solute carrier| family 25 member 27) Length = 323 Score = 32.7 bits (73), Expect = 0.26 Identities = 15/47 (31%), Positives = 23/47 (48%) Frame = -1 Query: 182 YTGSLDCAMQTMKTGGPFKFYSGFXVYCVRIAPHVMMXWLFLNXIQK 42 Y S DC +Q ++ G Y GF +R+ P M+ WL I++ Sbjct: 270 YKSSTDCLIQAVQGEGFMSLYKGFLPSWLRMTPWSMVFWLTYEKIRE 316
>ADT_CHLKE (P31692) ADP,ATP carrier protein (ADP/ATP translocase) (Adenine| nucleotide translocator) (ANT) Length = 339 Score = 32.3 bits (72), Expect = 0.35 Identities = 12/26 (46%), Positives = 16/26 (61%) Frame = -1 Query: 182 YTGSLDCAMQTMKTGGPFKFYSGFXV 105 +TG +DC + +K GGP Y GF V Sbjct: 187 FTGLVDCLSKVVKRGGPMALYQGFGV 212
>TXTP_RAT (P32089) Tricarboxylate transport protein, mitochondrial precursor| (Citrate transport protein) (CTP) (Tricarboxylate carrier protein) (Solute carrier family 25 member 1) Length = 311 Score = 32.3 bits (72), Expect = 0.35 Identities = 15/54 (27%), Positives = 26/54 (48%) Frame = -1 Query: 188 YPYTGSLDCAMQTMKTGGPFKFYSGFXVYCVRIAPHVMMXWLFLNXIQKYQXKI 27 + Y +LDC +Q +K GP FY G R+ V + ++ + + K K+ Sbjct: 254 HKYRNTLDCGVQILKNEGPKAFYKGTVPRLGRVCLDVAIVFVIYDEVVKLLNKV 307
>TXTP_CAEEL (P34519) Putative tricarboxylate transport protein, mitochondrial| precursor (Citrate transport protein) (CTP) Length = 312 Score = 31.6 bits (70), Expect = 0.59 Identities = 16/48 (33%), Positives = 24/48 (50%) Frame = -1 Query: 182 YTGSLDCAMQTMKTGGPFKFYSGFXVYCVRIAPHVMMXWLFLNXIQKY 39 Y +LDCAMQ K G F FY G R+ V + ++ + I ++ Sbjct: 256 YKNTLDCAMQIWKKEGFFAFYKGTVPRLSRVCLDVGITFMIYDSIIEF 303
>CMC1_CAEEL (Q21153) Probable calcium-binding mitochondrial carrier K02F3.2| Length = 707 Score = 31.6 bits (70), Expect = 0.59 Identities = 14/51 (27%), Positives = 23/51 (45%) Frame = -1 Query: 194 GKYPYTGSLDCAMQTMKTGGPFKFYSGFXVYCVRIAPHVMMXWLFLNXIQK 42 G+ Y G +DCA + +K GP + G R +P + L +Q+ Sbjct: 596 GQTTYNGVIDCARKLIKEEGPMSLWKGTAARVCRSSPQFAVTLLTYEVLQR 646
>GHC2_HUMAN (Q9H1K4) Mitochondrial glutamate carrier 2 (GC-2) (Glutamate/H(+)| symporter 2) (Solute carrier family 25 member 18) Length = 315 Score = 31.2 bits (69), Expect = 0.77 Identities = 14/37 (37%), Positives = 18/37 (48%) Frame = -1 Query: 194 GKYPYTGSLDCAMQTMKTGGPFKFYSGFXVYCVRIAP 84 GK Y G +DC M+T + G F Y G V + P Sbjct: 41 GKAMYKGMIDCLMKTARAEGFFGMYRGAAVNLTLVTP 77
>DIF1_CAEEL (Q27257) Protein dif-1| Length = 312 Score = 30.8 bits (68), Expect = 1.0 Identities = 14/41 (34%), Positives = 20/41 (48%) Frame = -1 Query: 206 PDATGKYPYTGSLDCAMQTMKTGGPFKFYSGFXVYCVRIAP 84 P K +TG+LDC +T+ G F Y G V ++P Sbjct: 38 PKPGEKPQFTGALDCVKRTVSKEGFFALYKGMAAPLVGVSP 78
>MCAT_RAT (P97521) Mitochondrial carnitine/acylcarnitine carrier protein| (Carnitine/acylcarnitine translocase) (CAC) (Solute carrier family 25 member 20) Length = 301 Score = 30.0 bits (66), Expect = 1.7 Identities = 14/39 (35%), Positives = 22/39 (56%) Frame = -1 Query: 200 ATGKYPYTGSLDCAMQTMKTGGPFKFYSGFXVYCVRIAP 84 ++GK Y+G+LDCA + + G FY G + +R P Sbjct: 143 SSGKNKYSGTLDCAKKLYQEFGIRGFYKGTALTLMRDVP 181
>COLT_DROME (Q9VQG4) Congested-like trachea protein| Length = 306 Score = 30.0 bits (66), Expect = 1.7 Identities = 16/44 (36%), Positives = 21/44 (47%), Gaps = 1/44 (2%) Frame = -1 Query: 212 MQPDATGKYP-YTGSLDCAMQTMKTGGPFKFYSGFXVYCVRIAP 84 M A G+ P Y G+ DCA +T+K G Y G +AP Sbjct: 46 MPRPAPGEQPLYRGTFDCAAKTIKNEGVRGLYKGMSAPLTGVAP 89
>GHC1_PONPY (Q5RD81) Mitochondrial glutamate carrier 1 (GC-1) (Glutamate/H(+)| symporter 1) (Solute carrier family 25 member 22) Length = 323 Score = 29.6 bits (65), Expect = 2.2 Identities = 13/43 (30%), Positives = 21/43 (48%) Frame = -1 Query: 212 MQPDATGKYPYTGSLDCAMQTMKTGGPFKFYSGFXVYCVRIAP 84 +Q G+ YT DC ++T+++ G F Y G V + P Sbjct: 36 LQNQQNGQRMYTSMSDCLIKTIRSEGYFGMYRGAAVNLTLVTP 78 Score = 28.5 bits (62), Expect = 5.0 Identities = 13/33 (39%), Positives = 18/33 (54%) Frame = -1 Query: 182 YTGSLDCAMQTMKTGGPFKFYSGFXVYCVRIAP 84 Y+G LDCA + ++ GP F G + IAP Sbjct: 265 YSGILDCARKILRHEGPSAFLKGAYCRALVIAP 297
>GHC1_HUMAN (Q9H936) Mitochondrial glutamate carrier 1 (GC-1) (Glutamate/H(+)| symporter 1) (Solute carrier family 25 member 22) Length = 323 Score = 29.6 bits (65), Expect = 2.2 Identities = 13/43 (30%), Positives = 21/43 (48%) Frame = -1 Query: 212 MQPDATGKYPYTGSLDCAMQTMKTGGPFKFYSGFXVYCVRIAP 84 +Q G+ YT DC ++T+++ G F Y G V + P Sbjct: 36 LQNQQNGQRVYTSMSDCLIKTVRSEGYFGMYRGAAVNLTLVTP 78 Score = 28.5 bits (62), Expect = 5.0 Identities = 13/33 (39%), Positives = 18/33 (54%) Frame = -1 Query: 182 YTGSLDCAMQTMKTGGPFKFYSGFXVYCVRIAP 84 Y+G LDCA + ++ GP F G + IAP Sbjct: 265 YSGILDCARKILRHEGPSAFLKGAYCRALVIAP 297
>RIM2_YEAST (P38127) Mitochondrial carrier protein RIM2| Length = 377 Score = 29.3 bits (64), Expect = 2.9 Identities = 14/42 (33%), Positives = 19/42 (45%) Frame = -1 Query: 206 PDATGKYPYTGSLDCAMQTMKTGGPFKFYSGFXVYCVRIAPH 81 P GK YTG + +K G F YSG + +R P+ Sbjct: 320 PKENGKRKYTGLVQSFKVIIKEEGLFSMYSGLTPHLMRTVPN 361
>CMC1_PONPY (Q5RBC8) Calcium-binding mitochondrial carrier protein Aralar1| (Mitochondrial aspartate glutamate carrier 1) (Solute carrier family 25 member 12) Length = 678 Score = 28.9 bits (63), Expect = 3.8 Identities = 12/52 (23%), Positives = 25/52 (48%) Frame = -1 Query: 194 GKYPYTGSLDCAMQTMKTGGPFKFYSGFXVYCVRIAPHVMMXWLFLNXIQKY 39 G+ Y+G +DC + ++ GP F+ G R +P + + +Q++ Sbjct: 553 GQTTYSGVIDCFRKILREEGPSAFWKGTAARVFRSSPQFGVTLVTYELLQRW 604
>MCAT_MACFA (Q8HXY2) Mitochondrial carnitine/acylcarnitine carrier protein| (Carnitine/acylcarnitine translocase) (CAC) (Solute carrier family 25 member 20) Length = 301 Score = 28.5 bits (62), Expect = 5.0 Identities = 14/39 (35%), Positives = 21/39 (53%) Frame = -1 Query: 200 ATGKYPYTGSLDCAMQTMKTGGPFKFYSGFXVYCVRIAP 84 ++G+ YTG+LDCA + + G Y G V +R P Sbjct: 143 SSGETKYTGTLDCAKKLYQEFGIRGIYKGTVVTLMRDVP 181
>ADT1_ANOGA (Q27238) ADP,ATP carrier protein 1 (ADP/ATP translocase 1) (Adenine| nucleotide translocator 1) (ANT 1) Length = 301 Score = 28.5 bits (62), Expect = 5.0 Identities = 12/30 (40%), Positives = 17/30 (56%) Frame = -1 Query: 194 GKYPYTGSLDCAMQTMKTGGPFKFYSGFXV 105 G+ + G LDC +T+K+ G Y GF V Sbjct: 152 GEREFNGLLDCLKKTVKSDGIIGLYRGFNV 181
>CMC1_MOUSE (Q8BH59) Calcium-binding mitochondrial carrier protein Aralar1| (Mitochondrial aspartate glutamate carrier 1) (Solute carrier family 25 member 12) Length = 677 Score = 28.5 bits (62), Expect = 5.0 Identities = 12/52 (23%), Positives = 25/52 (48%) Frame = -1 Query: 194 GKYPYTGSLDCAMQTMKTGGPFKFYSGFXVYCVRIAPHVMMXWLFLNXIQKY 39 G+ Y+G +DC + ++ GP F+ G R +P + + +Q++ Sbjct: 553 GQTTYSGVVDCFRKILREEGPSAFWKGTAARVFRSSPQFGVTLVTYELLQRW 604
>Y2143_SHEON (Q8EF50) Hypothetical transport protein SO2143| Length = 562 Score = 28.5 bits (62), Expect = 5.0 Identities = 11/28 (39%), Positives = 15/28 (53%) Frame = +3 Query: 114 AGVELKWATSLHGLHGTVQRPSVWVLSS 197 AG+ W S H G V P+VW ++S Sbjct: 423 AGLIFSWVRSFHPTFGWVPEPTVWFMNS 450
>CMC1_HUMAN (O75746) Calcium-binding mitochondrial carrier protein Aralar1| (Mitochondrial aspartate glutamate carrier 1) (Solute carrier family 25 member 12) Length = 678 Score = 28.5 bits (62), Expect = 5.0 Identities = 13/56 (23%), Positives = 25/56 (44%), Gaps = 9/56 (16%) Frame = -1 Query: 194 GKYPYTGSLDCAMQTMKTGGPFKFYSGFXVYCVRIAP---------HVMMXWLFLN 54 G+ Y+G +DC + ++ GP F+ G R +P V+ W +++ Sbjct: 553 GQTTYSGVIDCFRKILREEGPSAFWKGTAARVFRSSPQFGVTLAHYEVLQRWFYID 608
>MCAT_MOUSE (Q9Z2Z6) Mitochondrial carnitine/acylcarnitine carrier protein| (Carnitine/acylcarnitine translocase) (CAC) (mCAC) (Solute carrier family 25 member 20) Length = 301 Score = 28.1 bits (61), Expect = 6.5 Identities = 13/39 (33%), Positives = 22/39 (56%) Frame = -1 Query: 200 ATGKYPYTGSLDCAMQTMKTGGPFKFYSGFXVYCVRIAP 84 ++G+ Y+G+LDCA + + G FY G + +R P Sbjct: 143 SSGENKYSGTLDCAKKLYQEFGIRGFYKGTVLTLMRDVP 181 Score = 28.1 bits (61), Expect = 6.5 Identities = 16/60 (26%), Positives = 27/60 (45%), Gaps = 1/60 (1%) Frame = -1 Query: 206 PDATGKYP-YTGSLDCAMQTMKTGGPFKFYSGFXVYCVRIAPHVMMXWLFLNXIQKYQXK 30 P +G+ P Y+G+LDC +T+ G Y G + + P + + +K Q K Sbjct: 43 PSLSGQPPMYSGTLDCFRKTLMREGITGLYRGMAAPIIGVTPMFAVCFFGFGLGKKLQQK 102
>Y736_BACTN (Q8A9S9) Hypothetical transport protein BT_0736| Length = 564 Score = 28.1 bits (61), Expect = 6.5 Identities = 11/28 (39%), Positives = 16/28 (57%) Frame = +3 Query: 114 AGVELKWATSLHGLHGTVQRPSVWVLSS 197 AG+ W S H G + PS+WVL++ Sbjct: 426 AGLVFGWLRSKHPTFGGIPEPSLWVLNN 453
>TXTP_BOVIN (P79110) Tricarboxylate transport protein, mitochondrial precursor| (Citrate transport protein) (CTP) (Tricarboxylate carrier protein) (Solute carrier family 25 member 1) Length = 311 Score = 28.1 bits (61), Expect = 6.5 Identities = 13/54 (24%), Positives = 25/54 (46%) Frame = -1 Query: 188 YPYTGSLDCAMQTMKTGGPFKFYSGFXVYCVRIAPHVMMXWLFLNXIQKYQXKI 27 + Y +LDC +Q ++ G FY G R+ V + ++ + + K K+ Sbjct: 254 HKYRNTLDCGLQILRNEGLKAFYKGTVPRLGRVCLDVAIVFIIYDEVVKLLNKV 307
>GLGA_RHORT (Q2RS50) Glycogen synthase (EC 2.4.1.21) (Starch [bacterial| glycogen] synthase) Length = 485 Score = 28.1 bits (61), Expect = 6.5 Identities = 14/31 (45%), Positives = 16/31 (51%), Gaps = 4/31 (12%) Frame = -1 Query: 194 GKYPYTGS----LDCAMQTMKTGGPFKFYSG 114 G P TG LDC +TGGP+ YSG Sbjct: 74 GTMPDTGCPLWLLDCPAMYERTGGPYMMYSG 104
>UCP1_MESAU (P04575) Mitochondrial brown fat uncoupling protein 1 (UCP 1)| (Thermogenin) Length = 306 Score = 28.1 bits (61), Expect = 6.5 Identities = 16/55 (29%), Positives = 27/55 (49%) Frame = -1 Query: 194 GKYPYTGSLDCAMQTMKTGGPFKFYSGFXVYCVRIAPHVMMXWLFLNXIQKYQXK 30 G+YP S CAM + GP F+ GF +R+A ++ ++ ++K K Sbjct: 245 GQYPSVPS--CAMTMLTKEGPTAFFKGFVPSFLRLASWNVIMFVCFEQLKKELSK 297
>UCP3_PIG (O97649) Mitochondrial uncoupling protein 3 (UCP 3)| Length = 308 Score = 27.7 bits (60), Expect = 8.5 Identities = 12/52 (23%), Positives = 25/52 (48%) Frame = -1 Query: 182 YTGSLDCAMQTMKTGGPFKFYSGFXVYCVRIAPHVMMXWLFLNXIQKYQXKI 27 Y LDC ++ + GP FY GF +R+ ++ ++ +++ K+ Sbjct: 249 YQNPLDCMLKMVTQEGPTAFYKGFTPSFLRLGSWNVVMFVSYEQLKRALMKV 300
>UCP3_CANFA (Q9N2I9) Mitochondrial uncoupling protein 3 (UCP 3)| Length = 311 Score = 27.7 bits (60), Expect = 8.5 Identities = 12/52 (23%), Positives = 25/52 (48%) Frame = -1 Query: 182 YTGSLDCAMQTMKTGGPFKFYSGFXVYCVRIAPHVMMXWLFLNXIQKYQXKI 27 Y LDC ++ + GP FY GF +R+ ++ ++ +++ K+ Sbjct: 252 YCSPLDCMLKMVTQEGPTAFYKGFTPSFLRLGTWNVVMFVTYEQLKRALMKV 303
>GHC1_MOUSE (Q9D6M3) Mitochondrial glutamate carrier 1 (GC-1) (Glutamate/H(+)| symporter 1) (Solute carrier family 25 member 22) Length = 323 Score = 27.7 bits (60), Expect = 8.5 Identities = 12/43 (27%), Positives = 20/43 (46%) Frame = -1 Query: 212 MQPDATGKYPYTGSLDCAMQTMKTGGPFKFYSGFXVYCVRIAP 84 +Q G+ Y DC ++T+++ G F Y G V + P Sbjct: 36 LQNQQNGQRMYASMSDCLIKTIRSEGYFGMYRGAAVNLTLVTP 78
>UCP1_DICGR (Q8K404) Mitochondrial brown fat uncoupling protein 1 (UCP 1)| (Thermogenin) Length = 307 Score = 27.7 bits (60), Expect = 8.5 Identities = 15/51 (29%), Positives = 26/51 (50%) Frame = -1 Query: 194 GKYPYTGSLDCAMQTMKTGGPFKFYSGFXVYCVRIAPHVMMXWLFLNXIQK 42 G+YP S CAM + GP F+ GF +R+A ++ ++ ++K Sbjct: 246 GQYPSVPS--CAMTMLTKEGPTAFFKGFVPSFLRLASWNVIMFVCFEQLKK 294 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 30,477,491 Number of Sequences: 219361 Number of extensions: 443175 Number of successful extensions: 1116 Number of sequences better than 10.0: 34 Number of HSP's better than 10.0 without gapping: 1034 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1115 length of database: 80,573,946 effective HSP length: 46 effective length of database: 70,483,340 effective search space used: 1691600160 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
