| Clone Name | rbags25m04 |
|---|---|
| Clone Library Name | barley_pub |
>gb|BT009354.1| Triticum aestivum clone wlm96.pk0019.e8:fis, full insert mRNA sequence Length = 1539 Score = 1045 bits (527), Expect = 0.0 Identities = 614/643 (95%) Strand = Plus / Minus Query: 73 tggaccagcgtgctgattgttctaggcacatcaacatacttgcttcacattttggatcta 132 |||||| |||||||| ||||||||||||||||||||||||| ||||||||||| |||||| Sbjct: 1286 tggaccggcgtgctgcttgttctaggcacatcaacatacttccttcacatttttgatcta 1227 Query: 133 gatacgcaggatgaattttgtattttgatccgatgccaagatgtgttgaggattcctctc 192 |||||||| || | ||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 1226 gatacgcacgaagtattctgtattttgatccgatgccaagatgtgttgaggattcctctc 1167 Query: 193 aggttccatatgtcctccactttttcgggttggatgtttgcggccgagtccaccgcctta 252 || ||||||||||||||||||||||||||||| |||||||||||||| |||||||||||| Sbjct: 1166 agattccatatgtcctccactttttcgggttgaatgtttgcggccgaatccaccgcctta 1107 Query: 253 gctaatatctcggcatttggtggtatgtccaatgtagcctcgaagagaacccatgcccac 312 |||| |||||||||||||||||||||||||||||| ||||| || ||||||||||||||| Sbjct: 1106 gctactatctcggcatttggtggtatgtccaatgtggcctcaaatagaacccatgcccac 1047 Query: 313 ttgtcgctttgagctccatcagagacgtatggcacattgcttttctgatatctatgagcc 372 |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 1046 ttgtcgctttgagctccatcagagacatatggcacattgcttttctgatatctatgagct 987 Query: 373 tcaacccatgttttacccccatcaacagatatatctactctctcaatgccgcggccgcca 432 |||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||| Sbjct: 986 tcaacccatgttttacccccatcaacagatatatctaccctctcaatgccgcgggcgcca 927 Query: 433 cctgagactgcataaccagcaattctagcctttccttccttgataacatccacatcttcc 492 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 926 cctgagactgcatatccagcaattctagcctttccttccttgataacatccacatcttcc 867 Query: 493 agggtgcaaatagcagactgcacagggaaatccatttgtggtcttctagtcgaccaatta 552 |||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||| Sbjct: 866 agggtgcaaatagcagactgcacaggaaaatccatttgtggtcttctagttgaccaatta 807 Query: 553 atattgtcccaatctacggtaggtgggaacatcttgtaatctttttgcataaagaaaccc 612 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 806 atattgtcccaatctacggtaggtgggaacatcttgtaatctttttgcataaaaaaaccc 747 Query: 613 tggcattcttccttgattattttgatgctgtcaagccattttacagagcgtgcgcctata 672 |||||||||||||||||||| ||||||||||||||||||||||| |||||||| |||||| Sbjct: 746 tggcattcttccttgattatgttgatgctgtcaagccattttacggagcgtgcacctata 687 Query: 673 acaccaggtacaacaacacggagtggatatccatggtcacgat 715 ||||||||||| || ||||||||||||||||||||| |||||| Sbjct: 686 acaccaggtacgaccacacggagtggatatccatgggcacgat 644 Score = 52.0 bits (26), Expect = 0.003 Identities = 54/62 (87%), Gaps = 1/62 (1%) Strand = Plus / Minus Query: 17 gtctatatggaaatcgcagaaattaagctgcagtagctt-attatttggagatatcatgg 75 ||||||| | ||||| |||||||||||| | || |||| |||||||||||||||||||| Sbjct: 1353 gtctatacgaaaatcacagaaattaagccgtggtggctttattatttggagatatcatgg 1294 Query: 76 ac 77 || Sbjct: 1293 ac 1292
>ref|XM_483475.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1551 Score = 686 bits (346), Expect = 0.0 Identities = 535/598 (89%) Strand = Plus / Minus Query: 116 ttcacattttggatctagatacgcaggatgaattttgtattttgatccgatgccaagatg 175 |||||||||||||||| ||||| || ||||| ||||||||||||||||||||||||| Sbjct: 1245 ttcacattttggatcttcccacgcacgaagaattctgtattttgatccgatgccaagatg 1186 Query: 176 tgttgaggattcctctcaggttccatatgtcctccactttttcgggttggatgtttgcgg 235 ||||||||||||||||||||||||||| ||| ||||| ||||| ||||| | ||||| | Sbjct: 1185 tgttgaggattcctctcaggttccatacgtcttccaccttttcaggttgaacatttgctg 1126 Query: 236 ccgagtccaccgccttagctaatatctcggcatttggtggtatgtccaatgtagcctcga 295 | ||||||||||||||||||| |||||| || |||| ||| | ||| ||||||||||||| Sbjct: 1125 ctgagtccaccgccttagctactatctcagcgtttgctggaacgtctaatgtagcctcga 1066 Query: 296 agagaacccatgcccacttgtcgctttgagctccatcagagacgtatggcacattgcttt 355 | ||||||||||||||||| || || ||| ||||||||| | ||||||||| ||||||| Sbjct: 1065 atagaacccatgcccacttatcactccgaggtccatcagatatgtatggcacgttgcttt 1006 Query: 356 tctgatatctatgagcctcaacccatgttttacccccatcaacagatatatctactctct 415 ||||||||||||||||||| ||||||||||| |||||||| ||||||||||| ||||||| Sbjct: 1005 tctgatatctatgagcctcgacccatgttttccccccatcgacagatatatcaactctct 946 Query: 416 caatgccgcggccgccacctgagactgcataaccagcaattctagcctttccttccttga 475 ||||||| ||||| ||||||||||||||||| |||||||| |||||||| |||||||||| Sbjct: 945 caatgccacggccaccacctgagactgcatatccagcaatcctagccttcccttccttga 886 Query: 476 taacatccacatcttccagggtgcaaatagcagactgcacagggaaatccatttgtggtc 535 ||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||| | Sbjct: 885 taacatccacatcctccagggtacaaatagcagactgcacagggaaatccatttgtggcc 826 Query: 536 ttctagtcgaccaattaatattgtcccaatctacggtaggtgggaacatcttgtaatctt 595 | ||||| |||||||||||||||||||| ||||||| ||||| |||||||||||||||| Sbjct: 825 tcctagttgaccaattaatattgtcccagtctacggagggtggaaacatcttgtaatctt 766 Query: 596 tttgcataaagaaaccctggcattcttccttgattattttgatgctgtcaagccatttta 655 |||||| ||| ||||||||||||||||| | ||||| ||||| |||||||||||||||| Sbjct: 765 tttgcacaaaaaaaccctggcattcttcttcaattatgttgatactgtcaagccatttta 706 Query: 656 cagagcgtgcgcctataacaccaggtacaacaacacggagtggatatccatggtcacg 713 ||||||||||||| || || ||||||||||||||||| ||||| |||||||| ||||| Sbjct: 705 cagagcgtgcgccaattactccaggtacaacaacacgaagtgggtatccatgatcacg 648
>dbj|AK068532.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013155E12, full insert sequence Length = 1551 Score = 686 bits (346), Expect = 0.0 Identities = 535/598 (89%) Strand = Plus / Minus Query: 116 ttcacattttggatctagatacgcaggatgaattttgtattttgatccgatgccaagatg 175 |||||||||||||||| ||||| || ||||| ||||||||||||||||||||||||| Sbjct: 1245 ttcacattttggatcttcccacgcacgaagaattctgtattttgatccgatgccaagatg 1186 Query: 176 tgttgaggattcctctcaggttccatatgtcctccactttttcgggttggatgtttgcgg 235 ||||||||||||||||||||||||||| ||| ||||| ||||| ||||| | ||||| | Sbjct: 1185 tgttgaggattcctctcaggttccatacgtcttccaccttttcaggttgaacatttgctg 1126 Query: 236 ccgagtccaccgccttagctaatatctcggcatttggtggtatgtccaatgtagcctcga 295 | ||||||||||||||||||| |||||| || |||| ||| | ||| ||||||||||||| Sbjct: 1125 ctgagtccaccgccttagctactatctcagcgtttgctggaacgtctaatgtagcctcga 1066 Query: 296 agagaacccatgcccacttgtcgctttgagctccatcagagacgtatggcacattgcttt 355 | ||||||||||||||||| || || ||| ||||||||| | ||||||||| ||||||| Sbjct: 1065 atagaacccatgcccacttatcactccgaggtccatcagatatgtatggcacgttgcttt 1006 Query: 356 tctgatatctatgagcctcaacccatgttttacccccatcaacagatatatctactctct 415 ||||||||||||||||||| ||||||||||| |||||||| ||||||||||| ||||||| Sbjct: 1005 tctgatatctatgagcctcgacccatgttttccccccatcgacagatatatcaactctct 946 Query: 416 caatgccgcggccgccacctgagactgcataaccagcaattctagcctttccttccttga 475 ||||||| ||||| ||||||||||||||||| |||||||| |||||||| |||||||||| Sbjct: 945 caatgccacggccaccacctgagactgcatatccagcaatcctagccttcccttccttga 886 Query: 476 taacatccacatcttccagggtgcaaatagcagactgcacagggaaatccatttgtggtc 535 ||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||| | Sbjct: 885 taacatccacatcctccagggtacaaatagcagactgcacagggaaatccatttgtggcc 826 Query: 536 ttctagtcgaccaattaatattgtcccaatctacggtaggtgggaacatcttgtaatctt 595 | ||||| |||||||||||||||||||| ||||||| ||||| |||||||||||||||| Sbjct: 825 tcctagttgaccaattaatattgtcccagtctacggagggtggaaacatcttgtaatctt 766 Query: 596 tttgcataaagaaaccctggcattcttccttgattattttgatgctgtcaagccatttta 655 |||||| ||| ||||||||||||||||| | ||||| ||||| |||||||||||||||| Sbjct: 765 tttgcacaaaaaaaccctggcattcttcttcaattatgttgatactgtcaagccatttta 706 Query: 656 cagagcgtgcgcctataacaccaggtacaacaacacggagtggatatccatggtcacg 713 ||||||||||||| || || ||||||||||||||||| ||||| |||||||| ||||| Sbjct: 705 cagagcgtgcgccaattactccaggtacaacaacacgaagtgggtatccatgatcacg 648
>dbj|AB071966.1| Oryza sativa (japonica cultivar-group) OsMCP mRNA for Moco containing protein, complete cds Length = 1558 Score = 686 bits (346), Expect = 0.0 Identities = 535/598 (89%) Strand = Plus / Minus Query: 116 ttcacattttggatctagatacgcaggatgaattttgtattttgatccgatgccaagatg 175 |||||||||||||||| ||||| || ||||| ||||||||||||||||||||||||| Sbjct: 1282 ttcacattttggatcttcccacgcacgaagaattctgtattttgatccgatgccaagatg 1223 Query: 176 tgttgaggattcctctcaggttccatatgtcctccactttttcgggttggatgtttgcgg 235 ||||||||||||||||||||||||||| ||| ||||| ||||| ||||| | ||||| | Sbjct: 1222 tgttgaggattcctctcaggttccatacgtcttccaccttttcaggttgaacatttgctg 1163 Query: 236 ccgagtccaccgccttagctaatatctcggcatttggtggtatgtccaatgtagcctcga 295 | ||||||||||||||||||| |||||| || |||| ||| | ||| ||||||||||||| Sbjct: 1162 ctgagtccaccgccttagctactatctcagcgtttgctggaacgtctaatgtagcctcga 1103 Query: 296 agagaacccatgcccacttgtcgctttgagctccatcagagacgtatggcacattgcttt 355 | ||||||||||||||||| || || ||| ||||||||| | ||||||||| ||||||| Sbjct: 1102 atagaacccatgcccacttatcactccgaggtccatcagatatgtatggcacgttgcttt 1043 Query: 356 tctgatatctatgagcctcaacccatgttttacccccatcaacagatatatctactctct 415 ||||||||||||||||||| ||||||||||| |||||||| ||||||||||| ||||||| Sbjct: 1042 tctgatatctatgagcctcgacccatgttttccccccatcgacagatatatcaactctct 983 Query: 416 caatgccgcggccgccacctgagactgcataaccagcaattctagcctttccttccttga 475 ||||||| ||||| ||||||||||||||||| |||||||| |||||||| |||||||||| Sbjct: 982 caatgccacggccaccacctgagactgcatatccagcaatcctagccttcccttccttga 923 Query: 476 taacatccacatcttccagggtgcaaatagcagactgcacagggaaatccatttgtggtc 535 ||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||| | Sbjct: 922 taacatccacatcctccagggtacaaatagcagactgcacagggaaatccatttgtggcc 863 Query: 536 ttctagtcgaccaattaatattgtcccaatctacggtaggtgggaacatcttgtaatctt 595 | ||||| |||||||||||||||||||| ||||||| ||||| |||||||||||||||| Sbjct: 862 tcctagttgaccaattaatattgtcccagtctacggagggtggaaacatcttgtaatctt 803 Query: 596 tttgcataaagaaaccctggcattcttccttgattattttgatgctgtcaagccatttta 655 |||||| ||| ||||||||||||||||| | ||||| ||||| |||||||||||||||| Sbjct: 802 tttgcacaaaaaaaccctggcattcttcttcaattatgttgatactgtcaagccatttta 743 Query: 656 cagagcgtgcgcctataacaccaggtacaacaacacggagtggatatccatggtcacg 713 ||||||||||||| || || ||||||||||||||||| ||||| |||||||| ||||| Sbjct: 742 cagagcgtgcgccaattactccaggtacaacaacacgaagtgggtatccatgatcacg 685
>dbj|AK104910.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-047-A02, full insert sequence Length = 778 Score = 559 bits (282), Expect = e-156 Identities = 432/482 (89%) Strand = Plus / Minus Query: 116 ttcacattttggatctagatacgcaggatgaattttgtattttgatccgatgccaagatg 175 |||||||||||||||| ||||| || ||||| ||||||||||||||||||||||||| Sbjct: 482 ttcacattttggatcttcccacgcacgaagaattctgtattttgatccgatgccaagatg 423 Query: 176 tgttgaggattcctctcaggttccatatgtcctccactttttcgggttggatgtttgcgg 235 ||||||||||||||||||||||||||| ||| ||||| ||||| ||||| | ||||| | Sbjct: 422 tgttgaggattcctctcaggttccatacgtcttccaccttttcaggttgaacatttgctg 363 Query: 236 ccgagtccaccgccttagctaatatctcggcatttggtggtatgtccaatgtagcctcga 295 | ||||||||||||||||||| |||||| || |||| ||| | ||| ||||||||||||| Sbjct: 362 ctgagtccaccgccttagctactatctcagcgtttgctggaacgtctaatgtagcctcga 303 Query: 296 agagaacccatgcccacttgtcgctttgagctccatcagagacgtatggcacattgcttt 355 | ||||||||||||||||| || || ||| ||||||||| | ||||||||| ||||||| Sbjct: 302 atagaacccatgcccacttatcactccgaggtccatcagatatgtatggcacgttgcttt 243 Query: 356 tctgatatctatgagcctcaacccatgttttacccccatcaacagatatatctactctct 415 ||||||||||||||||||| ||||||||||| |||||||| ||||||||||| ||||||| Sbjct: 242 tctgatatctatgagcctcgacccatgttttccccccatcgacagatatatcaactctct 183 Query: 416 caatgccgcggccgccacctgagactgcataaccagcaattctagcctttccttccttga 475 ||||||| ||||| ||||||||||||||||| |||||||| |||||||| |||||||||| Sbjct: 182 caatgccacggccaccacctgagactgcatatccagcaatcctagccttcccttccttga 123 Query: 476 taacatccacatcttccagggtgcaaatagcagactgcacagggaaatccatttgtggtc 535 ||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||| | Sbjct: 122 taacatccacatcctccagggtacaaatagcagactgcacagggaaatccatttgtggcc 63 Query: 536 ttctagtcgaccaattaatattgtcccaatctacggtaggtgggaacatcttgtaatctt 595 | ||||| |||||||||||||||||||| ||||||| ||||| |||||||||||||||| Sbjct: 62 tcctagttgaccaattaatattgtcccagtctacggagggtggaaacatcttgtaatctt 3 Query: 596 tt 597 || Sbjct: 2 tt 1
>gb|AY104501.1| Zea mays PCO137761 mRNA sequence Length = 1631 Score = 454 bits (229), Expect = e-124 Identities = 475/557 (85%) Strand = Plus / Minus Query: 154 attttgatccgatgccaagatgtgttgaggattcctctcaggttccatatgtcctccact 213 |||||||||||||||||||| |||||||||||||| ||||| ||||||||||| || || Sbjct: 1315 attttgatccgatgccaagacgtgttgaggattcccctcagattccatatgtcttctacc 1256 Query: 214 ttttcgggttggatgtttgcggccgagtccaccgccttagctaatatctcggcatttggt 273 || ||||| || | |||||| || ||||||||||||||| ||| ||||| | ||| | | Sbjct: 1255 ttctcgggctgaacgtttgcagctgagtccaccgccttaactacgatctcaggattcgct 1196 Query: 274 ggtatgtccaatgtagcctcgaagagaacccatgcccacttgtcgctttgagctccatca 333 |||| ||| ||||| ||||| ||||||||||| |||||||| || ||||||| |||||| Sbjct: 1195 ggtacgtctaatgtggcctcaaagagaacccaagcccacttatcactttgaggtccatct 1136 Query: 334 gagacgtatggcacattgcttttctgatatctatgagcctcaacccatgttttaccccca 393 || || || | ||||||| |||||| |||||| ||||||| ||||| || ||||||||| Sbjct: 1135 gacacatacgccacattgtctttctggtatctacgagcctcgacccaggtcttaccccca 1076 Query: 394 tcaacagatatatctactctctcaatgccgcggccgccacctgagactgcataaccagca 453 ||| | |||| ||| |||||||||||||| ||||| |||||||| | |||||| |||||| Sbjct: 1075 tcagctgatacatccactctctcaatgccacggccaccacctgaaagtgcatatccagca 1016 Query: 454 attctagcctttccttccttgataacatccacatcttccagggtgcaaatagcagactgc 513 || ||||||| |||||||||||||||||| ||||||||||| || || |||||||||||| Sbjct: 1015 atcctagcctgtccttccttgataacatctacatcttccagtgtacagatagcagactgc 956 Query: 514 acagggaaatccatttgtggtcttctagtcgaccaattaatattgtcccaatctacggta 573 |||||||||||||| ||||| |||||||| ||||| ||||| |||||||| || ||||| Sbjct: 955 acagggaaatccatctgtggccttctagttgaccagttaatgttgtcccagtccacggtt 896 Query: 574 ggtgggaacatcttgtaatctttttgcataaagaaaccctggcattcttccttgattatt 633 || || ||||| |||||||||||||||||||| || ||||||||||| |||| ||| Sbjct: 895 ggcggaaacattttgtaatctttttgcataaaaaacccctggcattcctcctcttttacg 836 Query: 634 ttgatgctgtcaagccattttacagagcgtgcgcctataacaccaggtacaacaacacgg 693 ||||| ||||| |||||||||||||||||||| || ||||| |||||||||||||| ||| Sbjct: 835 ttgatactgtccagccattttacagagcgtgcaccaataactccaggtacaacaacccgg 776 Query: 694 agtggatatccatggtc 710 || || ||||| ||||| Sbjct: 775 agcgggtatccgtggtc 759
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 246 bits (124), Expect = 9e-62 Identities = 196/220 (89%) Strand = Plus / Minus Query: 244 accgccttagctaatatctcggcatttggtggtatgtccaatgtagcctcgaagagaacc 303 ||||||||||||| |||||| || |||| ||| | ||| |||||||||||||| |||||| Sbjct: 26414447 accgccttagctactatctcagcgtttgctggaacgtctaatgtagcctcgaatagaacc 26414388 Query: 304 catgcccacttgtcgctttgagctccatcagagacgtatggcacattgcttttctgatat 363 ||||||||||| || || ||| ||||||||| | ||||||||| ||||||||||||||| Sbjct: 26414387 catgcccacttatcactccgaggtccatcagatatgtatggcacgttgcttttctgatat 26414328 Query: 364 ctatgagcctcaacccatgttttacccccatcaacagatatatctactctctcaatgccg 423 ||||||||||| ||||||||||| |||||||| ||||||||||| |||||||||||||| Sbjct: 26414327 ctatgagcctcgacccatgttttccccccatcgacagatatatcaactctctcaatgcca 26414268 Query: 424 cggccgccacctgagactgcataaccagcaattctagcct 463 ||||| ||||||||||||||||| |||||||| ||||||| Sbjct: 26414267 cggccaccacctgagactgcatatccagcaatcctagcct 26414228 Score = 137 bits (69), Expect = 6e-29 Identities = 96/105 (91%) Strand = Plus / Minus Query: 510 ctgcacagggaaatccatttgtggtcttctagtcgaccaattaatattgtcccaatctac 569 |||||||||||||||||||||||| || ||||| |||||||||||||||||||| ||||| Sbjct: 26413893 ctgcacagggaaatccatttgtggcctcctagttgaccaattaatattgtcccagtctac 26413834 Query: 570 ggtaggtgggaacatcttgtaatctttttgcataaagaaaccctg 614 || ||||| |||||||||||||||||||||| ||| |||||||| Sbjct: 26413833 ggagggtggaaacatcttgtaatctttttgcacaaaaaaaccctg 26413789 Score = 133 bits (67), Expect = 9e-28 Identities = 115/131 (87%) Strand = Plus / Minus Query: 116 ttcacattttggatctagatacgcaggatgaattttgtattttgatccgatgccaagatg 175 |||||||||||||||| ||||| || ||||| ||||||||||||||||||||||||| Sbjct: 26414676 ttcacattttggatcttcccacgcacgaagaattctgtattttgatccgatgccaagatg 26414617 Query: 176 tgttgaggattcctctcaggttccatatgtcctccactttttcgggttggatgtttgcgg 235 ||||||||||||||||||||||||||| ||| ||||| ||||| ||||| | ||||| | Sbjct: 26414616 tgttgaggattcctctcaggttccatacgtcttccaccttttcaggttgaacatttgctg 26414557 Query: 236 ccgagtccacc 246 | ||||||||| Sbjct: 26414556 ctgagtccacc 26414546 Score = 117 bits (59), Expect = 5e-23 Identities = 92/103 (89%) Strand = Plus / Minus Query: 611 cctggcattcttccttgattattttgatgctgtcaagccattttacagagcgtgcgccta 670 ||||||||||||| | ||||| ||||| ||||||||||||||||||||||||||||| | Sbjct: 26413720 cctggcattcttcttcaattatgttgatactgtcaagccattttacagagcgtgcgccaa 26413661 Query: 671 taacaccaggtacaacaacacggagtggatatccatggtcacg 713 | || ||||||||||||||||| ||||| |||||||| ||||| Sbjct: 26413660 ttactccaggtacaacaacacgaagtgggtatccatgatcacg 26413618 Score = 79.8 bits (40), Expect = 1e-11 Identities = 49/52 (94%) Strand = Plus / Minus Query: 461 cctttccttccttgataacatccacatcttccagggtgcaaatagcagactg 512 |||| ||||||||||||||||||||||| |||||||| |||||||||||||| Sbjct: 26414101 ccttcccttccttgataacatccacatcctccagggtacaaatagcagactg 26414050
>dbj|AP003920.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1789_C07 Length = 138944 Score = 246 bits (124), Expect = 9e-62 Identities = 196/220 (89%) Strand = Plus / Minus Query: 244 accgccttagctaatatctcggcatttggtggtatgtccaatgtagcctcgaagagaacc 303 ||||||||||||| |||||| || |||| ||| | ||| |||||||||||||| |||||| Sbjct: 63999 accgccttagctactatctcagcgtttgctggaacgtctaatgtagcctcgaatagaacc 63940 Query: 304 catgcccacttgtcgctttgagctccatcagagacgtatggcacattgcttttctgatat 363 ||||||||||| || || ||| ||||||||| | ||||||||| ||||||||||||||| Sbjct: 63939 catgcccacttatcactccgaggtccatcagatatgtatggcacgttgcttttctgatat 63880 Query: 364 ctatgagcctcaacccatgttttacccccatcaacagatatatctactctctcaatgccg 423 ||||||||||| ||||||||||| |||||||| ||||||||||| |||||||||||||| Sbjct: 63879 ctatgagcctcgacccatgttttccccccatcgacagatatatcaactctctcaatgcca 63820 Query: 424 cggccgccacctgagactgcataaccagcaattctagcct 463 ||||| ||||||||||||||||| |||||||| ||||||| Sbjct: 63819 cggccaccacctgagactgcatatccagcaatcctagcct 63780 Score = 137 bits (69), Expect = 6e-29 Identities = 96/105 (91%) Strand = Plus / Minus Query: 510 ctgcacagggaaatccatttgtggtcttctagtcgaccaattaatattgtcccaatctac 569 |||||||||||||||||||||||| || ||||| |||||||||||||||||||| ||||| Sbjct: 63445 ctgcacagggaaatccatttgtggcctcctagttgaccaattaatattgtcccagtctac 63386 Query: 570 ggtaggtgggaacatcttgtaatctttttgcataaagaaaccctg 614 || ||||| |||||||||||||||||||||| ||| |||||||| Sbjct: 63385 ggagggtggaaacatcttgtaatctttttgcacaaaaaaaccctg 63341 Score = 133 bits (67), Expect = 9e-28 Identities = 115/131 (87%) Strand = Plus / Minus Query: 116 ttcacattttggatctagatacgcaggatgaattttgtattttgatccgatgccaagatg 175 |||||||||||||||| ||||| || ||||| ||||||||||||||||||||||||| Sbjct: 64228 ttcacattttggatcttcccacgcacgaagaattctgtattttgatccgatgccaagatg 64169 Query: 176 tgttgaggattcctctcaggttccatatgtcctccactttttcgggttggatgtttgcgg 235 ||||||||||||||||||||||||||| ||| ||||| ||||| ||||| | ||||| | Sbjct: 64168 tgttgaggattcctctcaggttccatacgtcttccaccttttcaggttgaacatttgctg 64109 Query: 236 ccgagtccacc 246 | ||||||||| Sbjct: 64108 ctgagtccacc 64098 Score = 117 bits (59), Expect = 5e-23 Identities = 92/103 (89%) Strand = Plus / Minus Query: 611 cctggcattcttccttgattattttgatgctgtcaagccattttacagagcgtgcgccta 670 ||||||||||||| | ||||| ||||| ||||||||||||||||||||||||||||| | Sbjct: 63272 cctggcattcttcttcaattatgttgatactgtcaagccattttacagagcgtgcgccaa 63213 Query: 671 taacaccaggtacaacaacacggagtggatatccatggtcacg 713 | || ||||||||||||||||| ||||| |||||||| ||||| Sbjct: 63212 ttactccaggtacaacaacacgaagtgggtatccatgatcacg 63170 Score = 79.8 bits (40), Expect = 1e-11 Identities = 49/52 (94%) Strand = Plus / Minus Query: 461 cctttccttccttgataacatccacatcttccagggtgcaaatagcagactg 512 |||| ||||||||||||||||||||||| |||||||| |||||||||||||| Sbjct: 63653 ccttcccttccttgataacatccacatcctccagggtacaaatagcagactg 63602
>dbj|AP004015.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1770_H02 Length = 170648 Score = 246 bits (124), Expect = 9e-62 Identities = 196/220 (89%) Strand = Plus / Minus Query: 244 accgccttagctaatatctcggcatttggtggtatgtccaatgtagcctcgaagagaacc 303 ||||||||||||| |||||| || |||| ||| | ||| |||||||||||||| |||||| Sbjct: 144028 accgccttagctactatctcagcgtttgctggaacgtctaatgtagcctcgaatagaacc 143969 Query: 304 catgcccacttgtcgctttgagctccatcagagacgtatggcacattgcttttctgatat 363 ||||||||||| || || ||| ||||||||| | ||||||||| ||||||||||||||| Sbjct: 143968 catgcccacttatcactccgaggtccatcagatatgtatggcacgttgcttttctgatat 143909 Query: 364 ctatgagcctcaacccatgttttacccccatcaacagatatatctactctctcaatgccg 423 ||||||||||| ||||||||||| |||||||| ||||||||||| |||||||||||||| Sbjct: 143908 ctatgagcctcgacccatgttttccccccatcgacagatatatcaactctctcaatgcca 143849 Query: 424 cggccgccacctgagactgcataaccagcaattctagcct 463 ||||| ||||||||||||||||| |||||||| ||||||| Sbjct: 143848 cggccaccacctgagactgcatatccagcaatcctagcct 143809 Score = 137 bits (69), Expect = 6e-29 Identities = 96/105 (91%) Strand = Plus / Minus Query: 510 ctgcacagggaaatccatttgtggtcttctagtcgaccaattaatattgtcccaatctac 569 |||||||||||||||||||||||| || ||||| |||||||||||||||||||| ||||| Sbjct: 143474 ctgcacagggaaatccatttgtggcctcctagttgaccaattaatattgtcccagtctac 143415 Query: 570 ggtaggtgggaacatcttgtaatctttttgcataaagaaaccctg 614 || ||||| |||||||||||||||||||||| ||| |||||||| Sbjct: 143414 ggagggtggaaacatcttgtaatctttttgcacaaaaaaaccctg 143370 Score = 133 bits (67), Expect = 9e-28 Identities = 115/131 (87%) Strand = Plus / Minus Query: 116 ttcacattttggatctagatacgcaggatgaattttgtattttgatccgatgccaagatg 175 |||||||||||||||| ||||| || ||||| ||||||||||||||||||||||||| Sbjct: 144257 ttcacattttggatcttcccacgcacgaagaattctgtattttgatccgatgccaagatg 144198 Query: 176 tgttgaggattcctctcaggttccatatgtcctccactttttcgggttggatgtttgcgg 235 ||||||||||||||||||||||||||| ||| ||||| ||||| ||||| | ||||| | Sbjct: 144197 tgttgaggattcctctcaggttccatacgtcttccaccttttcaggttgaacatttgctg 144138 Query: 236 ccgagtccacc 246 | ||||||||| Sbjct: 144137 ctgagtccacc 144127 Score = 117 bits (59), Expect = 5e-23 Identities = 92/103 (89%) Strand = Plus / Minus Query: 611 cctggcattcttccttgattattttgatgctgtcaagccattttacagagcgtgcgccta 670 ||||||||||||| | ||||| ||||| ||||||||||||||||||||||||||||| | Sbjct: 143301 cctggcattcttcttcaattatgttgatactgtcaagccattttacagagcgtgcgccaa 143242 Query: 671 taacaccaggtacaacaacacggagtggatatccatggtcacg 713 | || ||||||||||||||||| ||||| |||||||| ||||| Sbjct: 143241 ttactccaggtacaacaacacgaagtgggtatccatgatcacg 143199 Score = 79.8 bits (40), Expect = 1e-11 Identities = 49/52 (94%) Strand = Plus / Minus Query: 461 cctttccttccttgataacatccacatcttccagggtgcaaatagcagactg 512 |||| ||||||||||||||||||||||| |||||||| |||||||||||||| Sbjct: 143682 ccttcccttccttgataacatccacatcctccagggtacaaatagcagactg 143631
>dbj|AB243086.1| Codonopsis lanceolata mRNA for sulfite oxidase, complete cds Length = 1493 Score = 101 bits (51), Expect = 3e-18 Identities = 111/131 (84%) Strand = Plus / Minus Query: 487 tcttccagggtgcaaatagcagactgcacagggaaatccatttgtggtcttctagtcgac 546 ||||||| || ||| ||| || |||| || ||||||||||||||||| ||||| | ||| Sbjct: 866 tcttccaaggagcatataacacactgaactgggaaatccatttgtggccttctggaagac 807 Query: 547 caattaatattgtcccaatctacggtaggtgggaacatcttgtaatctttttgcataaag 606 |||| |||||| ||||||| || | |||||| ||||| ||||||||||||||||||||| Sbjct: 806 caatcaatattctcccaattaactgaaggtggaaacattttgtaatctttttgcataaag 747 Query: 607 aaaccctggca 617 || |||||||| Sbjct: 746 aatccctggca 736 Score = 61.9 bits (31), Expect = 3e-06 Identities = 97/119 (81%) Strand = Plus / Minus Query: 163 cgatgccaagatgtgttgaggattcctctcaggttccatatgtcctccactttttcgggt 222 |||||||| || ||||| || || ||||||| |||||||||| | || || ||||||||| Sbjct: 1190 cgatgccatgaagtgttcagtatccctctcaagttccatatgacttcaacgttttcgggt 1131 Query: 223 tggatgtttgcggccgagtccaccgccttagctaatatctcggcatttggtggtatgtc 281 || | ||||| ||||| ||||| || ||||| | ||| |||||| |||| |||||||| Sbjct: 1130 tgcacatttgctgccgaatccactgctttagcaactatttcggcacttgggggtatgtc 1072 Score = 42.1 bits (21), Expect = 2.5 Identities = 54/65 (83%) Strand = Plus / Minus Query: 382 gttttacccccatcaacagatatatctactctctcaatgccgcggccgccacctgagact 441 ||||| || ||||||| ||| | ||| ||||||||||| || || || |||||||| ||| Sbjct: 971 gttttgccaccatcaatagacacatcaactctctcaattccacgcccaccacctgaaact 912 Query: 442 gcata 446 ||||| Sbjct: 911 gcata 907
>gb|DQ284487.1| Solanum tuberosum clone 028B07 sulfite oxidase-like mRNA, complete cds Length = 1539 Score = 91.7 bits (46), Expect = 3e-15 Identities = 157/194 (80%) Strand = Plus / Minus Query: 514 acagggaaatccatttgtggtcttctagtcgaccaattaatattgtcccaatctacggta 573 |||||||| ||||| || ||||| ||||| ||||| || || || ||||| | || || Sbjct: 836 acagggaagtccatctgcggtctcctagtagaccagttgatgttatcccagttcactgtt 777 Query: 574 ggtgggaacatcttgtaatctttttgcataaagaaaccctggcattcttccttgattatt 633 ||||| ||||||||||| ||||||||||||||||| |||||||||||||| || || Sbjct: 776 ggtggaaacatcttgtagtctttttgcataaagaatccctggcattcttcggcaatgata 717 Query: 634 ttgatgctgtcaagccattttacagagcgtgcgcctataacaccaggtacaacaacacgg 693 |||||| |||||||| || || || || || ||||| |||||||| ||||| ||||| Sbjct: 716 ttgatgtaatcaagccacttaactgaacgggcacctatcacaccagggacaaccacacgc 657 Query: 694 agtggatatccatg 707 |||||||| ||||| Sbjct: 656 agtggatagccatg 643 Score = 46.1 bits (23), Expect = 0.16 Identities = 35/39 (89%) Strand = Plus / Minus Query: 162 ccgatgccaagatgtgttgaggattcctctcaggttcca 200 ||||||||| || ||||| |||||||||||||| ||||| Sbjct: 1188 ccgatgccatgaggtgttcaggattcctctcagattcca 1150
>ref|NM_001035543.1| Arabidopsis thaliana SOX (SULFITE OXIDASE); oxidoreductase/ sulfite oxidase AT3G01910 (SOX) transcript variant AT3G01910.2 mRNA, complete cds Length = 1191 Score = 83.8 bits (42), Expect = 7e-13 Identities = 93/110 (84%) Strand = Plus / Minus Query: 514 acagggaaatccatttgtggtcttctagtcgaccaattaatattgtcccaatctacggta 573 ||||||||||||||||| ||||| |||| ||||| || ||||| ||||||| || | Sbjct: 583 acagggaaatccatttgcggtctcctagaggaccagttgatattatcccaattgacagag 524 Query: 574 ggtgggaacatcttgtaatctttttgcataaagaaaccctggcattcttc 623 ||||| ||||| ||||||||||||||||| ||||| ||||||| |||||| Sbjct: 523 ggtggaaacattttgtaatctttttgcatgaagaatccctggctttcttc 474
>ref|NM_111057.2| Arabidopsis thaliana SOX (SULFITE OXIDASE); oxidoreductase/ sulfite oxidase AT3G01910 (SOX) transcript variant AT3G01910.1 mRNA, complete cds Length = 1562 Score = 83.8 bits (42), Expect = 7e-13 Identities = 93/110 (84%) Strand = Plus / Minus Query: 514 acagggaaatccatttgtggtcttctagtcgaccaattaatattgtcccaatctacggta 573 ||||||||||||||||| ||||| |||| ||||| || ||||| ||||||| || | Sbjct: 954 acagggaaatccatttgcggtctcctagaggaccagttgatattatcccaattgacagag 895 Query: 574 ggtgggaacatcttgtaatctttttgcataaagaaaccctggcattcttc 623 ||||| ||||| ||||||||||||||||| ||||| ||||||| |||||| Sbjct: 894 ggtggaaacattttgtaatctttttgcatgaagaatccctggctttcttc 845
>gb|BT014141.1| Lycopersicon esculentum clone 133260F, mRNA sequence Length = 1502 Score = 83.8 bits (42), Expect = 7e-13 Identities = 156/194 (80%) Strand = Plus / Minus Query: 514 acagggaaatccatttgtggtcttctagtcgaccaattaatattgtcccaatctacggta 573 ||||| || ||||| || ||||| ||||| ||||| || || || ||||||| || || Sbjct: 902 acaggaaagtccatctgcggtctcctagtagaccagttgatgttatcccaattcactgtt 843 Query: 574 ggtgggaacatcttgtaatctttttgcataaagaaaccctggcattcttccttgattatt 633 ||||| ||||||||||| ||||||||||||||||| |||| ||||||||| || || Sbjct: 842 ggtggaaacatcttgtagtctttttgcataaagaatcccttgcattcttcggcaatgata 783 Query: 634 ttgatgctgtcaagccattttacagagcgtgcgcctataacaccaggtacaacaacacgg 693 |||||| |||||||| || || || || || ||||| |||||||| ||||| ||||| Sbjct: 782 ttgatggaatcaagccacttaactgaacgggcacctatcacaccagggacaaccacacgc 723 Query: 694 agtggatatccatg 707 |||||||| ||||| Sbjct: 722 agtggatagccatg 709 Score = 46.1 bits (23), Expect = 0.16 Identities = 35/39 (89%) Strand = Plus / Minus Query: 162 ccgatgccaagatgtgttgaggattcctctcaggttcca 200 ||||||||| || ||||| |||||||||||||| ||||| Sbjct: 1254 ccgatgccatgaggtgttcaggattcctctcagattcca 1216
>gb|AY133863.1| Arabidopsis thaliana clone U09219 putative sulfite oxidase (At3g01910) mRNA, complete cds Length = 1213 Score = 83.8 bits (42), Expect = 7e-13 Identities = 93/110 (84%) Strand = Plus / Minus Query: 514 acagggaaatccatttgtggtcttctagtcgaccaattaatattgtcccaatctacggta 573 ||||||||||||||||| ||||| |||| ||||| || ||||| ||||||| || | Sbjct: 797 acagggaaatccatttgcggtctcctagaggaccagttgatattatcccaattgacagag 738 Query: 574 ggtgggaacatcttgtaatctttttgcataaagaaaccctggcattcttc 623 ||||| ||||| ||||||||||||||||| ||||| ||||||| |||||| Sbjct: 737 ggtggaaacattttgtaatctttttgcatgaagaatccctggctttcttc 688
>gb|AF360247.1| Arabidopsis thaliana putative sulfite oxidase (At3g01910) mRNA, complete cds Length = 1424 Score = 83.8 bits (42), Expect = 7e-13 Identities = 93/110 (84%) Strand = Plus / Minus Query: 514 acagggaaatccatttgtggtcttctagtcgaccaattaatattgtcccaatctacggta 573 ||||||||||||||||| ||||| |||| ||||| || ||||| ||||||| || | Sbjct: 835 acagggaaatccatttgcggtctcctagaggaccagttgatattatcccaattgacagag 776 Query: 574 ggtgggaacatcttgtaatctttttgcataaagaaaccctggcattcttc 623 ||||| ||||| ||||||||||||||||| ||||| ||||||| |||||| Sbjct: 775 ggtggaaacattttgtaatctttttgcatgaagaatccctggctttcttc 726
>emb|BX822197.1|CNS0A7BY Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB1ZA03 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1292 Score = 83.8 bits (42), Expect = 7e-13 Identities = 93/110 (84%) Strand = Plus / Minus Query: 514 acagggaaatccatttgtggtcttctagtcgaccaattaatattgtcccaatctacggta 573 ||||||||||||||||| ||||| |||| ||||| || ||||| ||||||| || | Sbjct: 809 acagggaaatccatttgcggtctcctagaggaccagttgatattatcccaattgacagag 750 Query: 574 ggtgggaacatcttgtaatctttttgcataaagaaaccctggcattcttc 623 ||||| ||||| ||||||||||||||||| ||||| ||||||| |||||| Sbjct: 749 ggtggaaacattttgtaatctttttgcatgaagaatccctggctttcttc 700
>emb|BX824314.1|CNS0A6QI Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH39ZD01 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1271 Score = 83.8 bits (42), Expect = 7e-13 Identities = 93/110 (84%) Strand = Plus / Minus Query: 514 acagggaaatccatttgtggtcttctagtcgaccaattaatattgtcccaatctacggta 573 ||||||||||||||||| ||||| |||| ||||| || ||||| ||||||| || | Sbjct: 807 acagggaaatccatttgcggtctcctagaggaccagttgatattatcccaattgacagag 748 Query: 574 ggtgggaacatcttgtaatctttttgcataaagaaaccctggcattcttc 623 ||||| ||||| ||||||||||||||||| ||||| ||||||| |||||| Sbjct: 747 ggtggaaacattttgtaatctttttgcatgaagaatccctggctttcttc 698
>emb|BX823636.1|CNS0A6I2 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS5ZE04 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1300 Score = 83.8 bits (42), Expect = 7e-13 Identities = 93/110 (84%) Strand = Plus / Minus Query: 514 acagggaaatccatttgtggtcttctagtcgaccaattaatattgtcccaatctacggta 573 ||||||||||||||||| ||||| |||| ||||| || ||||| ||||||| || | Sbjct: 802 acagggaaatccatttgcggtctcctagaggaccagttgatattatcccaattgacagag 743 Query: 574 ggtgggaacatcttgtaatctttttgcataaagaaaccctggcattcttc 623 ||||| ||||| ||||||||||||||||| ||||| ||||||| |||||| Sbjct: 742 ggtggaaacattttgtaatctttttgcatgaagaatccctggctttcttc 693
>emb|BX823609.1|CNS0A6JK Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS56ZF05 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1290 Score = 83.8 bits (42), Expect = 7e-13 Identities = 93/110 (84%) Strand = Plus / Minus Query: 514 acagggaaatccatttgtggtcttctagtcgaccaattaatattgtcccaatctacggta 573 ||||||||||||||||| ||||| |||| ||||| || ||||| ||||||| || | Sbjct: 802 acagggaaatccatttgcggtctcctagaggaccagttgatattatcccaattgacagag 743 Query: 574 ggtgggaacatcttgtaatctttttgcataaagaaaccctggcattcttc 623 ||||| ||||| ||||||||||||||||| ||||| ||||||| |||||| Sbjct: 742 ggtggaaacattttgtaatctttttgcatgaagaatccctggctttcttc 693
>emb|BX822198.1|CNS0A4UL Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB1ZA07 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1262 Score = 83.8 bits (42), Expect = 7e-13 Identities = 93/110 (84%) Strand = Plus / Minus Query: 514 acagggaaatccatttgtggtcttctagtcgaccaattaatattgtcccaatctacggta 573 ||||||||||||||||| ||||| |||| ||||| || ||||| ||||||| || | Sbjct: 809 acagggaaatccatttgcggtctcctagaggaccagttgatattatcccaattgacagag 750 Query: 574 ggtgggaacatcttgtaatctttttgcataaagaaaccctggcattcttc 623 ||||| ||||| ||||||||||||||||| ||||| ||||||| |||||| Sbjct: 749 ggtggaaacattttgtaatctttttgcatgaagaatccctggctttcttc 700
>dbj|AB071965.1| Arabidopsis thaliana AtMCP mRNA for Moco containing protein, complete cds Length = 1580 Score = 83.8 bits (42), Expect = 7e-13 Identities = 93/110 (84%) Strand = Plus / Minus Query: 514 acagggaaatccatttgtggtcttctagtcgaccaattaatattgtcccaatctacggta 573 ||||||||||||||||| ||||| |||| ||||| || ||||| ||||||| || | Sbjct: 954 acagggaaatccatttgcggtctcctagaggaccagttgatattatcccaattgacagag 895 Query: 574 ggtgggaacatcttgtaatctttttgcataaagaaaccctggcattcttc 623 ||||| ||||| ||||||||||||||||| ||||| ||||||| |||||| Sbjct: 894 ggtggaaacattttgtaatctttttgcatgaagaatccctggctttcttc 845
>gb|AF200972.1|AF200972 Arabidopsis thaliana sulfite oxidase (SOX) mRNA, complete cds Length = 1426 Score = 75.8 bits (38), Expect = 2e-10 Identities = 92/110 (83%) Strand = Plus / Minus Query: 514 acagggaaatccatttgtggtcttctagtcgaccaattaatattgtcccaatctacggta 573 ||||||||||||||||| ||||| |||| ||||| || ||||| | ||||| || | Sbjct: 813 acagggaaatccatttgcggtctcctagaggaccagttgatattatgccaattgacagag 754 Query: 574 ggtgggaacatcttgtaatctttttgcataaagaaaccctggcattcttc 623 ||||| ||||| ||||||||||||||||| ||||| ||||||| |||||| Sbjct: 753 ggtggaaacattttgtaatctttttgcatgaagaatccctggctttcttc 704
>dbj|AK069818.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023028K01, full insert sequence Length = 1483 Score = 75.8 bits (38), Expect = 2e-10 Identities = 65/74 (87%) Strand = Plus / Minus Query: 552 aatattgtcccaatctacggtaggtgggaacatcttgtaatctttttgcataaagaaacc 611 ||||||||||||||| || | || |||||||| |||||||| ||||||||||||||||| Sbjct: 877 aatattgtcccaatcaacagatggagggaacattttgtaatccttttgcataaagaaacc 818 Query: 612 ctggcattcttcct 625 ||| || ||||||| Sbjct: 817 ctgacactcttcct 804 Score = 40.1 bits (20), Expect = 9.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 294 gaagagaacccatgcccacttgtc 317 |||||||||||| ||||||||||| Sbjct: 1135 gaagagaacccaagcccacttgtc 1112
>gb|AC011664.10|ATAC011664 Arabidopsis thaliana chromosome III BAC F1C9 genomic sequence, complete sequence Length = 103960 Score = 71.9 bits (36), Expect = 3e-09 Identities = 84/100 (84%) Strand = Plus / Minus Query: 514 acagggaaatccatttgtggtcttctagtcgaccaattaatattgtcccaatctacggta 573 ||||||||||||||||| ||||| |||| ||||| || ||||| ||||||| || | Sbjct: 93572 acagggaaatccatttgcggtctcctagaggaccagttgatattatcccaattgacagag 93513 Query: 574 ggtgggaacatcttgtaatctttttgcataaagaaaccct 613 ||||| ||||| ||||||||||||||||| ||||| |||| Sbjct: 93512 ggtggaaacattttgtaatctttttgcatgaagaatccct 93473
>gb|AC010797.4|ATAC010797 Arabidopsis thaliana chromosome III BAC F28J7 genomic sequence, complete sequence Length = 89154 Score = 71.9 bits (36), Expect = 3e-09 Identities = 84/100 (84%) Strand = Plus / Plus Query: 514 acagggaaatccatttgtggtcttctagtcgaccaattaatattgtcccaatctacggta 573 ||||||||||||||||| ||||| |||| ||||| || ||||| ||||||| || | Sbjct: 60462 acagggaaatccatttgcggtctcctagaggaccagttgatattatcccaattgacagag 60521 Query: 574 ggtgggaacatcttgtaatctttttgcataaagaaaccct 613 ||||| ||||| ||||||||||||||||| ||||| |||| Sbjct: 60522 ggtggaaacattttgtaatctttttgcatgaagaatccct 60561
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 69.9 bits (35), Expect = 1e-08 Identities = 56/63 (88%) Strand = Plus / Plus Query: 552 aatattgtcccaatctacggtaggtgggaacatcttgtaatctttttgcataaagaaacc 611 ||||||||||||||| || | || |||||||| |||||||| ||||||||||||||||| Sbjct: 14873002 aatattgtcccaatcaacagatggagggaacattttgtaatccttttgcataaagaaacc 14873061 Query: 612 ctg 614 ||| Sbjct: 14873062 ctg 14873064 Score = 44.1 bits (22), Expect = 0.63 Identities = 22/22 (100%) Strand = Plus / Plus Query: 33 cagaaattaagctgcagtagct 54 |||||||||||||||||||||| Sbjct: 25681360 cagaaattaagctgcagtagct 25681381 Score = 40.1 bits (20), Expect = 9.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 294 gaagagaacccatgcccacttgtc 317 |||||||||||| ||||||||||| Sbjct: 14872287 gaagagaacccaagcccacttgtc 14872310
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 69.9 bits (35), Expect = 1e-08 Identities = 56/63 (88%) Strand = Plus / Plus Query: 552 aatattgtcccaatctacggtaggtgggaacatcttgtaatctttttgcataaagaaacc 611 ||||||||||||||| || | || |||||||| |||||||| ||||||||||||||||| Sbjct: 14827285 aatattgtcccaatcaacagatggagggaacattttgtaatccttttgcataaagaaacc 14827344 Query: 612 ctg 614 ||| Sbjct: 14827345 ctg 14827347 Score = 44.1 bits (22), Expect = 0.63 Identities = 22/22 (100%) Strand = Plus / Plus Query: 33 cagaaattaagctgcagtagct 54 |||||||||||||||||||||| Sbjct: 25609536 cagaaattaagctgcagtagct 25609557 Score = 40.1 bits (20), Expect = 9.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 294 gaagagaacccatgcccacttgtc 317 |||||||||||| ||||||||||| Sbjct: 14826570 gaagagaacccaagcccacttgtc 14826593
>emb|AL772417.3|CNS08C9V Oryza sativa chromosome 12, . BAC OSJNBa0041M09 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 146519 Score = 69.9 bits (35), Expect = 1e-08 Identities = 56/63 (88%) Strand = Plus / Minus Query: 552 aatattgtcccaatctacggtaggtgggaacatcttgtaatctttttgcataaagaaacc 611 ||||||||||||||| || | || |||||||| |||||||| ||||||||||||||||| Sbjct: 46884 aatattgtcccaatcaacagatggagggaacattttgtaatccttttgcataaagaaacc 46825 Query: 612 ctg 614 ||| Sbjct: 46824 ctg 46822 Score = 40.1 bits (20), Expect = 9.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 294 gaagagaacccatgcccacttgtc 317 |||||||||||| ||||||||||| Sbjct: 47599 gaagagaacccaagcccacttgtc 47576
>gb|AC183495.1| Brassica oleracea Contig A, complete sequence Length = 356505 Score = 63.9 bits (32), Expect = 7e-07 Identities = 83/100 (83%) Strand = Plus / Plus Query: 514 acagggaaatccatttgtggtcttctagtcgaccaattaatattgtcccaatctacggta 573 ||||||||||||||||| || || || | ||||| | ||||||||||||| || | | Sbjct: 272616 acagggaaatccatttggggcctccttgaggaccagtcgatattgtcccaattgacagaa 272675 Query: 574 ggtgggaacatcttgtaatctttttgcataaagaaaccct 613 || |||||||| ||||||||||||||||| || ||||||| Sbjct: 272676 ggagggaacattttgtaatctttttgcatgaaaaaaccct 272715
>emb|BX825489.1|CNS0A678 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL3ZD06 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1378 Score = 61.9 bits (31), Expect = 3e-06 Identities = 85/103 (82%) Strand = Plus / Minus Query: 514 acagggaaatccatttgtggtcttctagtcgaccaattaatattgtcccaatctacggta 573 ||||||||||||||||| ||||| |||| ||||| || ||||| ||||||| || | Sbjct: 810 acagggaaatccatttgcggtctcctagaggaccagttgatattatcccaattgacagag 751 Query: 574 ggtgggaacatcttgtaatctttttgcataaagaaaccctggc 616 ||||| || || |||| |||||||||||| ||||| ||||||| Sbjct: 750 ggtggaaagattttgtgatctttttgcatgaagaatccctggc 708
>gb|AF000719.1|RVPBSA3 Rhodella violacea heme oxygenase (pbsA) gene, chloroplast gene encoding chloroplast protein, exon 3, and complete cds Length = 1074 Score = 44.1 bits (22), Expect = 0.63 Identities = 22/22 (100%) Strand = Plus / Minus Query: 586 ttgtaatctttttgcataaaga 607 |||||||||||||||||||||| Sbjct: 28 ttgtaatctttttgcataaaga 7
>emb|AL731881.4|CNS08C8L Oryza sativa chromosome 12, . BAC OSJNBa0002L05 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 167131 Score = 44.1 bits (22), Expect = 0.63 Identities = 22/22 (100%) Strand = Plus / Plus Query: 33 cagaaattaagctgcagtagct 54 |||||||||||||||||||||| Sbjct: 48598 cagaaattaagctgcagtagct 48619
>gb|AC019212.4|AC019212 Homo sapiens BAC clone RP11-462H12 from X, complete sequence Length = 213793 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 463 tttccttccttgataacatcc 483 ||||||||||||||||||||| Sbjct: 59607 tttccttccttgataacatcc 59627
>gb|AC119804.12| Mus musculus chromosome 7, clone RP23-144D10, complete sequence Length = 208232 Score = 40.1 bits (20), Expect = 9.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 6 ttcctgacatggtctatatggaaa 29 ||||||||||||||| |||||||| Sbjct: 38726 ttcctgacatggtctctatggaaa 38703
>gb|AC167696.2| Reniera sp. JGI-2005 clone JGIBAYC-5E8, complete sequence Length = 38144 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 142 gatgaattttgtattttgat 161 |||||||||||||||||||| Sbjct: 16669 gatgaattttgtattttgat 16688
>gb|AC099572.12| Mus musculus chromosome 15, clone RP23-16A17, complete sequence Length = 200229 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 141 ggatgaattttgtattttga 160 |||||||||||||||||||| Sbjct: 112799 ggatgaattttgtattttga 112780
>ref|XM_415204.1| PREDICTED: Gallus gallus similar to TPR repeat containing protein KIAA1043 (LOC416913), mRNA Length = 7782 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 62 tggagatatcatggaccagc 81 |||||||||||||||||||| Sbjct: 4332 tggagatatcatggaccagc 4351
>gb|AC113961.14| Mus musculus chromosome 19, clone RP23-18G1, complete sequence Length = 256791 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 442 gcataaccagcaattctagc 461 |||||||||||||||||||| Sbjct: 3907 gcataaccagcaattctagc 3888
>gb|AC093683.3| Homo sapiens BAC clone RP11-675J17 from 7, complete sequence Length = 6400 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 618 ttcttccttgattattttga 637 |||||||||||||||||||| Sbjct: 3825 ttcttccttgattattttga 3844
>gb|AC146025.2| Pan troglodytes BAC clone RP43-119E9 from 7, complete sequence Length = 156630 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 618 ttcttccttgattattttga 637 |||||||||||||||||||| Sbjct: 106467 ttcttccttgattattttga 106486
>gb|AC138894.2| Homo sapiens chromosome 16 clone RP11-435I10, complete sequence Length = 182289 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 179 tgaggattcctctcaggttc 198 |||||||||||||||||||| Sbjct: 30004 tgaggattcctctcaggttc 30023
>gb|AC136948.2| Homo sapiens chromosome 16 clone RP11-455I19, complete sequence Length = 201986 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 179 tgaggattcctctcaggttc 198 |||||||||||||||||||| Sbjct: 48459 tgaggattcctctcaggttc 48440
>gb|AC002425.1|HUAC002425 Homo sapiens Chromosome 16 BAC clone CIT987SK-A-575C2, complete sequence Length = 113241 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 179 tgaggattcctctcaggttc 198 |||||||||||||||||||| Sbjct: 74168 tgaggattcctctcaggttc 74187
>gb|AC002544.1|HUAC002544 Homo sapiens Chromosome 16 BAC clone CIT987SK-A-761H5, complete sequence Length = 156641 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 179 tgaggattcctctcaggttc 198 |||||||||||||||||||| Sbjct: 152962 tgaggattcctctcaggttc 152943
>gb|AC113544.9| Mus musculus chromosome 10, clone RP23-227F5, complete sequence Length = 177145 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 370 gcctcaacccatgttttacc 389 |||||||||||||||||||| Sbjct: 23509 gcctcaacccatgttttacc 23490
>ref|XM_500898.1| Yarrowia lipolytica CLIB122, YALI0B14751g predicted mRNA Length = 3072 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 692 ggagtggatatccatggtca 711 |||||||||||||||||||| Sbjct: 510 ggagtggatatccatggtca 491
>ref|XM_964956.1| PREDICTED: Tribolium castaneum similar to transient receptor potential cation channel, subfamily C, member 4 isoform 2 (LOC658579), mRNA Length = 2340 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 25 ggaaatcgcagaaattaagc 44 |||||||||||||||||||| Sbjct: 2289 ggaaatcgcagaaattaagc 2308
>gb|AC166343.1| Mus musculus BAC clone RP23-470N9 from chromosome 9, complete sequence Length = 191957 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 583 atcttgtaatctttttgcat 602 |||||||||||||||||||| Sbjct: 38034 atcttgtaatctttttgcat 38053
>gb|BC036430.1| Homo sapiens clathrin, heavy polypeptide (Hc), mRNA (cDNA clone IMAGE:4812912), complete cds Length = 2290 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 590 aatctttttgcataaagaaa 609 |||||||||||||||||||| Sbjct: 247 aatctttttgcataaagaaa 228
>gb|AC153511.4| Mus musculus 10 BAC RP23-102N12 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 196715 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 370 gcctcaacccatgttttacc 389 |||||||||||||||||||| Sbjct: 188144 gcctcaacccatgttttacc 188125
>gb|AC040904.4| Homo sapiens chromosome 17, clone RP11-619I22, complete sequence Length = 173651 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 590 aatctttttgcataaagaaa 609 |||||||||||||||||||| Sbjct: 47705 aatctttttgcataaagaaa 47686
>gb|AC098482.2| Homo sapiens chromosome 3 clone RP11-839L21, complete sequence Length = 211533 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 596 tttgcataaagaaaccctgg 615 |||||||||||||||||||| Sbjct: 184284 tttgcataaagaaaccctgg 184265
>gb|AC091271.8| Homo sapiens chromosome 17, clone RP11-758H9, complete sequence Length = 135784 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 590 aatctttttgcataaagaaa 609 |||||||||||||||||||| Sbjct: 26374 aatctttttgcataaagaaa 26393
>emb|BX322540.5| Zebrafish DNA sequence from clone CH211-247B3 in linkage group 19, complete sequence Length = 156150 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 63 ggagatatcatggaccagcg 82 |||||||||||||||||||| Sbjct: 7168 ggagatatcatggaccagcg 7187
>gb|AC026411.7| Homo sapiens chromosome 16 clone CTC-543N4, complete sequence Length = 137371 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 179 tgaggattcctctcaggttc 198 |||||||||||||||||||| Sbjct: 97378 tgaggattcctctcaggttc 97397
>gb|AC008956.8| Homo sapiens chromosome 16 clone CTD-2343L5, complete sequence Length = 110129 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 179 tgaggattcctctcaggttc 198 |||||||||||||||||||| Sbjct: 89326 tgaggattcctctcaggttc 89307
>gb|AC138934.3| Homo sapiens chromosome 16 clone RP11-685O4, complete sequence Length = 169127 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 179 tgaggattcctctcaggttc 198 |||||||||||||||||||| Sbjct: 141358 tgaggattcctctcaggttc 141339
>gb|AC020765.8| Homo sapiens chromosome 16 clone RP11-666O2, complete sequence Length = 195588 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 179 tgaggattcctctcaggttc 198 |||||||||||||||||||| Sbjct: 38447 tgaggattcctctcaggttc 38428
>gb|AC009970.10| Homo sapiens BAC clone RP11-440P5 from 2, complete sequence Length = 137009 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 468 ttccttgataacatccacat 487 |||||||||||||||||||| Sbjct: 63850 ttccttgataacatccacat 63831
>gb|AC026358.36| Homo sapiens 12 BAC RP11-522N14 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 146128 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 372 ctcaacccatgttttacccc 391 |||||||||||||||||||| Sbjct: 6929 ctcaacccatgttttacccc 6948
>gb|AC157914.4| Mus musculus chromosome 19, clone RP24-284E14, complete sequence Length = 166967 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 442 gcataaccagcaattctagc 461 |||||||||||||||||||| Sbjct: 65647 gcataaccagcaattctagc 65666
>gb|AC004695.1|AC004695 Homo sapiens BAC clone CTA-317H1 from 3p13-3p14.2, complete sequence Length = 149572 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 596 tttgcataaagaaaccctgg 615 |||||||||||||||||||| Sbjct: 134968 tttgcataaagaaaccctgg 134987
>gb|AC154771.2| Mus musculus BAC clone RP24-448F8 from 13, complete sequence Length = 165376 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 624 cttgattattttgatgctgt 643 |||||||||||||||||||| Sbjct: 89122 cttgattattttgatgctgt 89141
>gb|AY550246.1| Paracoccidioides brasiliensis small G-protein GPA1 (gpa1) gene, complete cds Length = 3825 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 455 ttctagcctttccttccttg 474 |||||||||||||||||||| Sbjct: 1951 ttctagcctttccttccttg 1932
>gb|AC141473.4| Mus musculus BAC clone RP24-187J17 from 3, complete sequence Length = 178156 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 340 tatggcacattgcttttctg 359 |||||||||||||||||||| Sbjct: 49324 tatggcacattgcttttctg 49305
>emb|CR382128.1| Yarrowia lipolytica chromosome B of strain CLIB122 of Yarrowia lipolytica Length = 3066374 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 692 ggagtggatatccatggtca 711 |||||||||||||||||||| Sbjct: 1960773 ggagtggatatccatggtca 1960792
>gb|AE017262.2| Listeria monocytogenes str. 4b F2365, complete genome Length = 2905187 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 647 gccattttacagagcgtgcg 666 |||||||||||||||||||| Sbjct: 2125055 gccattttacagagcgtgcg 2125036
>gb|AC172368.1| Mus musculus BAC clone RP23-170F12 from chromosome 9, complete sequence Length = 231123 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 583 atcttgtaatctttttgcat 602 |||||||||||||||||||| Sbjct: 178770 atcttgtaatctttttgcat 178789 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7,297,989 Number of Sequences: 3902068 Number of extensions: 7297989 Number of successful extensions: 119357 Number of sequences better than 10.0: 69 Number of HSP's better than 10.0 without gapping: 71 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 119029 Number of HSP's gapped (non-prelim): 304 length of query: 716 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 693 effective length of database: 17,143,297,704 effective search space: 11880305308872 effective search space used: 11880305308872 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)