ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags25l17
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1Y3478_ARATH (Q9SQZ9) Protein At3g04780 211 1e-54
2TXNL1_HUMAN (O43396) Thioredoxin-like protein 1 (32 kDa thioredo... 93 6e-19
3TXNL1_RAT (Q920J4) Thioredoxin-like protein 1 (Thioredoxin-relat... 93 7e-19
4TXNL1_MOUSE (Q8CDN6) Thioredoxin-like protein 1 (32 kDa thioredo... 93 7e-19
5YOJ9_CAEEL (Q95ZI6) Hypothetical protein ZK353.9 46 1e-04
6MAS1L_HUMAN (P35410) Mas-related G-protein coupled receptor MRG ... 30 7.6

>Y3478_ARATH (Q9SQZ9) Protein At3g04780|
          Length = 176

 Score =  211 bits (537), Expect = 1e-54
 Identities = 105/145 (72%), Positives = 119/145 (82%)
 Frame = -1

Query: 623 AHGIANALKQGYREDEGLHLASDSDEQLLIYIPFMQVIKLHSALFKGPEEEGPKTVKLFS 444
           +H + NALKQGYREDEGL+L SD+DEQLLIYIPF QVIKLHS   KGPEEEGPKTVK FS
Sbjct: 33  SHSLPNALKQGYREDEGLNLESDADEQLLIYIPFNQVIKLHSFAIKGPEEEGPKTVKFFS 92

Query: 443 NREHMGFSNVNDFPPXXXXXXXXXXXXXSKPVTLKYVKFQNVRSLTMFIEDNQSGADITK 264
           N+EHM FSNVNDFPP              KPV LKYVKFQNVRSLT+FIE NQSG+++TK
Sbjct: 93  NKEHMCFSNVNDFPP-SDTAELTEENLKGKPVVLKYVKFQNVRSLTIFIEANQSGSEVTK 151

Query: 263 IQKIALYGTTVDTTNMKDLKKIEEH 189
           +QKIALYG+TV+TT+MK LKKIE+H
Sbjct: 152 VQKIALYGSTVETTDMKGLKKIEDH 176



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>TXNL1_HUMAN (O43396) Thioredoxin-like protein 1 (32 kDa thioredoxin-related|
           protein)
          Length = 288

 Score = 93.2 bits (230), Expect = 6e-19
 Identities = 55/143 (38%), Positives = 74/143 (51%), Gaps = 2/143 (1%)
 Frame = -1

Query: 620 HGIANALKQGYREDEGLHLASDSDEQLLIYIPFMQVIKLHSALFKGPEE-EGPKTVKLFS 444
           HG  N L++     +   L SD DEQLLI + F Q +KL+S  F+GP+  +GPK VK+F 
Sbjct: 143 HGFDNCLRK-----DTTFLESDCDEQLLITVAFNQPVKLYSMKFQGPDNGQGPKYVKIFI 197

Query: 443 NREH-MGFSNVNDFPPXXXXXXXXXXXXXSKPVTLKYVKFQNVRSLTMFIEDNQSGADIT 267
           N    M F       P                V L+YVKFQNV S+T+F++ NQ   + T
Sbjct: 198 NLPRSMDFEEAERSEPTQALELTEDDIKEDGIVPLRYVKFQNVNSVTIFVQSNQGEEETT 257

Query: 266 KIQKIALYGTTVDTTNMKDLKKI 198
           +I      GT V  TNM D K++
Sbjct: 258 RISYFTFIGTPVQATNMNDFKRV 280



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>TXNL1_RAT (Q920J4) Thioredoxin-like protein 1 (Thioredoxin-related protein)|
          Length = 288

 Score = 92.8 bits (229), Expect = 7e-19
 Identities = 55/143 (38%), Positives = 73/143 (51%), Gaps = 2/143 (1%)
 Frame = -1

Query: 620 HGIANALKQGYREDEGLHLASDSDEQLLIYIPFMQVIKLHSALFKGPEE-EGPKTVKLFS 444
           HG  N L++         L SD DEQLLI + F Q +KL+S  F+GP+  +GPK VK+F 
Sbjct: 143 HGFDNCLRKDLS-----FLESDCDEQLLITVAFNQPVKLYSMKFQGPDNGQGPKYVKIFI 197

Query: 443 NREH-MGFSNVNDFPPXXXXXXXXXXXXXSKPVTLKYVKFQNVRSLTMFIEDNQSGADIT 267
           N    M F       P                V L+YVKFQNV S+T+F++ NQ   + T
Sbjct: 198 NLPRSMDFEEAERSEPTQALELTEDDIKEDGIVPLRYVKFQNVNSVTLFVQSNQGEEETT 257

Query: 266 KIQKIALYGTTVDTTNMKDLKKI 198
           +I      GT V  TNM D K++
Sbjct: 258 RISYFTFIGTPVQATNMNDFKRV 280



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>TXNL1_MOUSE (Q8CDN6) Thioredoxin-like protein 1 (32 kDa thioredoxin-related|
           protein)
          Length = 288

 Score = 92.8 bits (229), Expect = 7e-19
 Identities = 55/143 (38%), Positives = 73/143 (51%), Gaps = 2/143 (1%)
 Frame = -1

Query: 620 HGIANALKQGYREDEGLHLASDSDEQLLIYIPFMQVIKLHSALFKGPEE-EGPKTVKLFS 444
           HG  N L++         L SD DEQLLI + F Q +KL+S  F+GP+  +GPK VK+F 
Sbjct: 143 HGFDNCLRKDMS-----FLESDCDEQLLITVAFNQPVKLYSMKFQGPDNGQGPKYVKIFI 197

Query: 443 NREH-MGFSNVNDFPPXXXXXXXXXXXXXSKPVTLKYVKFQNVRSLTMFIEDNQSGADIT 267
           N    M F       P                V L+YVKFQNV S+T+F++ NQ   + T
Sbjct: 198 NLPRSMDFEEAERSEPTQALELTEDDIKEDGIVPLRYVKFQNVNSVTLFVQSNQGEEETT 257

Query: 266 KIQKIALYGTTVDTTNMKDLKKI 198
           +I      GT V  TNM D K++
Sbjct: 258 RISYFTFIGTPVQATNMNDFKRV 280



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>YOJ9_CAEEL (Q95ZI6) Hypothetical protein ZK353.9|
          Length = 208

 Score = 45.8 bits (107), Expect = 1e-04
 Identities = 36/117 (30%), Positives = 54/117 (46%), Gaps = 1/117 (0%)
 Frame = -1

Query: 587 REDEGLHLASDSDEQLLIYIPFMQVIKLHSALFKGPEE-EGPKTVKLFSNREHMGFSNVN 411
           R+D   ++ SD D +LL  IPF   ++L      G E+   P  ++LF +RE M F + +
Sbjct: 58  RDDRLEYVESDCDHELLFNIPFTGHVRLTGLSIIGDEDGSHPAKIRLFKDREAMSFDDCS 117

Query: 410 DFPPXXXXXXXXXXXXXSKPVTLKYVKFQNVRSLTMFIEDNQSGADITKIQKIALYG 240
                              P  LK  KF N+ +L++ ++ N  G D TKI  I L G
Sbjct: 118 IEADQEIDLKQDPQGLVDYP--LKASKFGNIHNLSILVDAN-FGEDETKIYYIGLRG 171



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>MAS1L_HUMAN (P35410) Mas-related G-protein coupled receptor MRG (MAS-R)|
           (MAS1-like)
          Length = 378

 Score = 29.6 bits (65), Expect = 7.6
 Identities = 18/52 (34%), Positives = 29/52 (55%)
 Frame = -2

Query: 433 IWVSATSMTFLQVTVLTYHPAIYWKVSL*R*SM*SSRMFAA*LCLLKTIKAE 278
           I++  +++ FLQVT+LTYH  +++       ++ S   F   LCLL  I  E
Sbjct: 121 IYLCCSAVGFLQVTLLTYHGVVFFIPDF--LAILSPFSFEVCLCLLVAISTE 170


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 78,287,291
Number of Sequences: 219361
Number of extensions: 1535491
Number of successful extensions: 3687
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 3610
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3683
length of database: 80,573,946
effective HSP length: 107
effective length of database: 57,102,319
effective search space used: 5710231900
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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