Clone Information

BLAST Search Result

Clone Name	rbags26a17
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	RS29_GRIJA (Q7XYB0) 40S ribosomal protein S29	99	5e-21
2	RS29_SPOFR (Q8WQI3) 40S ribosomal protein S29	90	2e-18
3	RS29_NEUCR (Q9C2P2) 40S ribosomal protein S29	87	1e-17
4	RS29_CULQU (Q9NB51) 40S ribosomal protein S29	87	2e-17
5	RS29_RAT (P62275) 40S ribosomal protein S29	86	5e-17
6	RS29_MOUSE (P62274) 40S ribosomal protein S29	86	5e-17
7	RS29_HUMAN (P62273) 40S ribosomal protein S29	86	5e-17
8	RS29_BOVIN (P62276) 40S ribosomal protein S29	86	5e-17
9	RS29A_YEAST (P41057) 40S ribosomal protein S29-A (S36) (YS29)	86	5e-17
10	RS29_ICTPU (Q90YP2) 40S ribosomal protein S29	85	7e-17
11	RS29_HIPCM (Q6UZG0) 40S ribosomal protein S29	85	7e-17
12	RS29_DROME (Q9VH69) 40S ribosomal protein S29	84	1e-16
13	RS29B_YEAST (P41058) 40S ribosomal protein S29-B (S36) (YS29)	82	5e-16
14	RS29_PIG (Q6QAP6) 40S ribosomal protein S29	81	1e-15
15	RS29_SCHPO (O74329) 40S ribosomal protein S29	74	2e-13
16	RS14_METTH (O26125) 30S ribosomal protein S14P	60	2e-09
17	RS14_ARCFU (O28368) 30S ribosomal protein S14P	57	2e-08
18	RS14_METVA (P14041) 30S ribosomal protein S14P	56	5e-08
19	RS14_SULTO (Q975J4) 30S ribosomal protein S14P	55	8e-08
20	RS14_SULSO (Q97ZQ5) 30S ribosomal protein S14P	53	3e-07
21	RS14_METJA (P54110) 30S ribosomal protein S14P	52	7e-07
22	RS14_AERPE (P58731) 30S ribosomal protein S14P	52	7e-07
23	RS14_THEVO (Q97BW2) 30S ribosomal protein S14P	51	1e-06
24	RS29_ENCCU (Q8SS73) 40S ribosomal protein S29	51	1e-06
25	RS14_SULAC (O05635) 30S ribosomal protein S14P	50	2e-06
26	RS14_THEAC (Q9HIS1) 30S ribosomal protein S14P	50	2e-06
27	RS14_PYRHO (P62013) 30S ribosomal protein S14P	50	2e-06
28	RS14_PYRAB (P62012) 30S ribosomal protein S14P	50	2e-06
29	RS14_PYRAE (Q8ZVW1) 30S ribosomal protein S14P	48	1e-05
30	RS14_HALSA (Q9HPC0) 30S ribosomal protein S14P	48	1e-05
31	RS14_HALMA (P26816) 30S ribosomal protein S14P (HmaS14)	45	1e-04
32	RS14_CLOAB (Q97EJ1) 30S ribosomal protein S14	39	0.006
33	RS14_CLOPE (Q8XHT6) 30S ribosomal protein S14	38	0.013
34	INVO_MOUSE (P48997) Involucrin	33	0.24
35	RS14_HELPJ (Q9ZJS5) 30S ribosomal protein S14	33	0.41
36	RS14_MYCGA (O52345) 30S ribosomal protein S14	32	0.91
37	TRFL_PIG (P14632) Lactotransferrin precursor (EC 3.4.21.-) (Lact...	31	1.2
38	RS14_MYCPU (Q98PZ5) 30S ribosomal protein S14	31	1.2
39	RS14_MYCCT (P10130) 30S ribosomal protein S14	31	1.2
40	RS14_HELPY (P56021) 30S ribosomal protein S14	31	1.2
41	RS14A_STRCO (P66417) 30S ribosomal protein S14-1	31	1.6
42	RS14A_STRAW (P66418) 30S ribosomal protein S14-1	31	1.6
43	RS14A_LISMO (P66401) 30S ribosomal protein S14-1	30	2.0
44	RS14A_LISIN (P66402) 30S ribosomal protein S14-1	30	2.0
45	RS14A_BACSU (P12878) 30S ribosomal protein S14-1 (BS-A)	30	2.0
46	SERC_PHOLL (Q7N6D6) Phosphoserine aminotransferase (EC 2.6.1.52)...	30	2.7
47	RS14_THEMA (Q9ZAE6) 30S ribosomal protein S14	29	4.5
48	RS14_BACHD (Q9Z9K1) 30S ribosomal protein S14	29	4.5
49	RS14A_STRP8 (P66423) 30S ribosomal protein S14-1	29	4.5
50	RS14A_STRP6 (Q5XEC2) 30S ribosomal protein S14-1	29	4.5
51	RS14A_STRP3 (P66422) 30S ribosomal protein S14-1	29	4.5
52	RS14A_STRP1 (P66421) 30S ribosomal protein S14-1	29	4.5
53	RS14_UREPA (Q9PQP7) 30S ribosomal protein S14	29	5.9
54	RS14_CAMJE (Q9PLY4) 30S ribosomal protein S14	29	5.9
55	C71BJ_ARATH (Q9LTM4) Cytochrome P450 71B19 (EC 1.14.-.-)	29	5.9
56	IF2_BORPE (Q7VYR2) Translation initiation factor IF-2	29	5.9
57	IF2_BORBR (Q7WHG2) Translation initiation factor IF-2	29	5.9
58	TOR3A_MOUSE (Q9ER38) Torsin-3A precursor (Torsin family 3 member...	28	7.7
59	DCE1_PONPY (Q5R7S7) Glutamate decarboxylase 1 (EC 4.1.1.15)	28	7.7
60	DCE1_PANTR (Q5IS68) Glutamate decarboxylase 1 (EC 4.1.1.15) (Glu...	28	7.7
61	DCE1_HUMAN (Q99259) Glutamate decarboxylase 1 (EC 4.1.1.15) (Glu...	28	7.7
62	DCE1_FELCA (P14748) Glutamate decarboxylase 1 (EC 4.1.1.15) (Glu...	28	7.7
63	RS14_BACST (P54798) 30S ribosomal protein S14 (BS21)	28	7.7
64	RS14A_STAAW (P66413) 30S ribosomal protein S14-1	28	7.7
65	RS14A_STAAS (Q6G784) 30S ribosomal protein S14-1	28	7.7
66	RS14A_STAAR (Q6GEJ6) 30S ribosomal protein S14-1	28	7.7
67	RS14A_STAAN (P66412) 30S ribosomal protein S14-1	28	7.7
68	RS14A_STAAM (P66411) 30S ribosomal protein S14-1	28	7.7
69	RS14A_STAAC (Q5HDX1) 30S ribosomal protein S14-1	28	7.7
70	C71B4_ARATH (O65786) Cytochrome P450 71B4 (EC 1.14.-.-)	28	7.7
71	MAS2_AGRRH (P27873) Agropine synthesis conjugase	28	7.7

>RS29_GRIJA (Q7XYB0) 40S ribosomal protein S29|
          Length = 56

 Score = 99.0 bits (245), Expect = 5e-21
 Identities = 40/56 (71%), Positives = 45/56 (80%)
 Frame = -1

Query: 382 MGHSNVWNSHPKNYGPGSRVCRVCGNSHGLIRKYGLMCCRQCFRSNAKDIGFIKYR 215
           MGH N+W SHP+ YG GSR C++CGN HGLIRKY +  CRQCFR  AKDIGFIKYR
Sbjct: 1   MGHQNIWYSHPRKYGKGSRSCKICGNKHGLIRKYSMNICRQCFREYAKDIGFIKYR 56

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>RS29_SPOFR (Q8WQI3) 40S ribosomal protein S29|
          Length = 56

 Score = 90.1 bits (222), Expect = 2e-18
 Identities = 38/54 (70%), Positives = 41/54 (75%)
 Frame = -1

Query: 382 MGHSNVWNSHPKNYGPGSRVCRVCGNSHGLIRKYGLMCCRQCFRSNAKDIGFIK 221
           MGH+N+W SHP+ YG GSR CR C N HGLIRKYGL  CRQCFR  A DIGF K
Sbjct: 1   MGHANIWYSHPRRYGQGSRSCRACSNRHGLIRKYGLNICRQCFREYAHDIGFKK 54

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>RS29_NEUCR (Q9C2P2) 40S ribosomal protein S29|
          Length = 56

 Score = 87.4 bits (215), Expect = 1e-17
 Identities = 38/56 (67%), Positives = 42/56 (75%)
 Frame = -1

Query: 382 MGHSNVWNSHPKNYGPGSRVCRVCGNSHGLIRKYGLMCCRQCFRSNAKDIGFIKYR 215
           M H +VWNS P+ YG GSR CRVC +S GLIRKYGL  CRQCFR  A DIGF K+R
Sbjct: 1   MSHESVWNSRPRTYGKGSRSCRVCTHSAGLIRKYGLNICRQCFREKANDIGFTKHR 56

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>RS29_CULQU (Q9NB51) 40S ribosomal protein S29|
          Length = 56

 Score = 86.7 bits (213), Expect = 2e-17
 Identities = 36/54 (66%), Positives = 42/54 (77%)
 Frame = -1

Query: 382 MGHSNVWNSHPKNYGPGSRVCRVCGNSHGLIRKYGLMCCRQCFRSNAKDIGFIK 221
           MG +++W SHP+ YG GSR CR C N+HG+IRKYGL  CRQCFR  AKDIGF K
Sbjct: 1   MGFADLWYSHPRKYGQGSRFCRACSNNHGMIRKYGLNICRQCFREYAKDIGFRK 54

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>RS29_RAT (P62275) 40S ribosomal protein S29|
          Length = 55

 Score = 85.5 bits (210), Expect = 5e-17
 Identities = 37/53 (69%), Positives = 41/53 (77%)
 Frame = -1

Query: 379 GHSNVWNSHPKNYGPGSRVCRVCGNSHGLIRKYGLMCCRQCFRSNAKDIGFIK 221
           GH  ++ SHP+ +G GSR CRVC N HGLIRKYGL  CRQCFR  AKDIGFIK
Sbjct: 1   GHQQLYWSHPRKFGQGSRSCRVCSNRHGLIRKYGLNMCRQCFRQYAKDIGFIK 53

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>RS29_MOUSE (P62274) 40S ribosomal protein S29|
          Length = 55

 Score = 85.5 bits (210), Expect = 5e-17
 Identities = 37/53 (69%), Positives = 41/53 (77%)
 Frame = -1

Query: 379 GHSNVWNSHPKNYGPGSRVCRVCGNSHGLIRKYGLMCCRQCFRSNAKDIGFIK 221
           GH  ++ SHP+ +G GSR CRVC N HGLIRKYGL  CRQCFR  AKDIGFIK
Sbjct: 1   GHQQLYWSHPRKFGQGSRSCRVCSNRHGLIRKYGLNMCRQCFRQYAKDIGFIK 53

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>RS29_HUMAN (P62273) 40S ribosomal protein S29|
          Length = 55

 Score = 85.5 bits (210), Expect = 5e-17
 Identities = 37/53 (69%), Positives = 41/53 (77%)
 Frame = -1

Query: 379 GHSNVWNSHPKNYGPGSRVCRVCGNSHGLIRKYGLMCCRQCFRSNAKDIGFIK 221
           GH  ++ SHP+ +G GSR CRVC N HGLIRKYGL  CRQCFR  AKDIGFIK
Sbjct: 1   GHQQLYWSHPRKFGQGSRSCRVCSNRHGLIRKYGLNMCRQCFRQYAKDIGFIK 53

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>RS29_BOVIN (P62276) 40S ribosomal protein S29|
          Length = 55

 Score = 85.5 bits (210), Expect = 5e-17
 Identities = 37/53 (69%), Positives = 41/53 (77%)
 Frame = -1

Query: 379 GHSNVWNSHPKNYGPGSRVCRVCGNSHGLIRKYGLMCCRQCFRSNAKDIGFIK 221
           GH  ++ SHP+ +G GSR CRVC N HGLIRKYGL  CRQCFR  AKDIGFIK
Sbjct: 1   GHQQLYWSHPRKFGQGSRSCRVCSNRHGLIRKYGLNMCRQCFRQYAKDIGFIK 53

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>RS29A_YEAST (P41057) 40S ribosomal protein S29-A (S36) (YS29)|
          Length = 55

 Score = 85.5 bits (210), Expect = 5e-17
 Identities = 37/54 (68%), Positives = 40/54 (74%)
 Frame = -1

Query: 376 HSNVWNSHPKNYGPGSRVCRVCGNSHGLIRKYGLMCCRQCFRSNAKDIGFIKYR 215
           H NVW SHP+ YG GSR CRVC +  GLIRKYGL  CRQCFR  A DIGF K+R
Sbjct: 2   HENVWFSHPRRYGKGSRQCRVCSSHTGLIRKYGLNICRQCFREKANDIGFNKFR 55

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>RS29_ICTPU (Q90YP2) 40S ribosomal protein S29|
          Length = 55

 Score = 85.1 bits (209), Expect = 7e-17
 Identities = 36/53 (67%), Positives = 41/53 (77%)
 Frame = -1

Query: 379 GHSNVWNSHPKNYGPGSRVCRVCGNSHGLIRKYGLMCCRQCFRSNAKDIGFIK 221
           GH  ++ SHP+ +G GSR CRVC N HGLIRKYGL  CRQCFR  AKDIGF+K
Sbjct: 1   GHQQLYWSHPRKFGQGSRSCRVCSNRHGLIRKYGLNMCRQCFRQYAKDIGFVK 53

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>RS29_HIPCM (Q6UZG0) 40S ribosomal protein S29|
          Length = 55

 Score = 85.1 bits (209), Expect = 7e-17
 Identities = 36/53 (67%), Positives = 41/53 (77%)
 Frame = -1

Query: 379 GHSNVWNSHPKNYGPGSRVCRVCGNSHGLIRKYGLMCCRQCFRSNAKDIGFIK 221
           GH  ++ SHP+ +G GSR CRVC N HGLIRKYGL  CRQCFR  AKDIGF+K
Sbjct: 1   GHQQLYWSHPRKFGQGSRSCRVCSNRHGLIRKYGLNMCRQCFRQYAKDIGFVK 53

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>RS29_DROME (Q9VH69) 40S ribosomal protein S29|
          Length = 56

 Score = 84.3 bits (207), Expect = 1e-16
 Identities = 36/54 (66%), Positives = 39/54 (72%)
 Frame = -1

Query: 382 MGHSNVWNSHPKNYGPGSRVCRVCGNSHGLIRKYGLMCCRQCFRSNAKDIGFIK 221
           MG + +W SHP+ YG GSR CR C N HGLIRKYGL  CRQCFR  A DIGF K
Sbjct: 1   MGFATLWYSHPRKYGQGSRCCRACSNRHGLIRKYGLNICRQCFREYANDIGFKK 54

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>RS29B_YEAST (P41058) 40S ribosomal protein S29-B (S36) (YS29)|
          Length = 55

 Score = 82.4 bits (202), Expect = 5e-16
 Identities = 35/54 (64%), Positives = 39/54 (72%)
 Frame = -1

Query: 376 HSNVWNSHPKNYGPGSRVCRVCGNSHGLIRKYGLMCCRQCFRSNAKDIGFIKYR 215
           H NVW SHP+ +G GSR CRVC +  GL+RKY L  CRQCFR  A DIGF KYR
Sbjct: 2   HENVWFSHPRRFGKGSRQCRVCSSHTGLVRKYDLNICRQCFREKANDIGFHKYR 55

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>RS29_PIG (Q6QAP6) 40S ribosomal protein S29|
          Length = 55

 Score = 80.9 bits (198), Expect = 1e-15
 Identities = 36/53 (67%), Positives = 39/53 (73%)
 Frame = -1

Query: 379 GHSNVWNSHPKNYGPGSRVCRVCGNSHGLIRKYGLMCCRQCFRSNAKDIGFIK 221
           G    + SHP+ +G GSR CRVC N HGLIRKYGL  CRQCFR  AKDIGFIK
Sbjct: 1   GPQGFYWSHPRKFGQGSRSCRVCSNRHGLIRKYGLNMCRQCFRQYAKDIGFIK 53

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>RS29_SCHPO (O74329) 40S ribosomal protein S29|
          Length = 55

 Score = 73.6 bits (179), Expect = 2e-13
 Identities = 34/54 (62%), Positives = 36/54 (66%)
 Frame = -1

Query: 376 HSNVWNSHPKNYGPGSRVCRVCGNSHGLIRKYGLMCCRQCFRSNAKDIGFIKYR 215
           H NVW SHP+ YG GSR C   G   GLIRKYGL   RQ FR  A DIGF+KYR
Sbjct: 2   HENVWFSHPRKYGKGSRQCAHTGRRLGLIRKYGLNISRQSFREYANDIGFVKYR 55

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>RS14_METTH (O26125) 30S ribosomal protein S14P|
          Length = 50

 Score = 60.5 bits (145), Expect = 2e-09
 Identities = 26/45 (57%), Positives = 30/45 (66%)
 Frame = -1

Query: 352 PKNYGPGSRVCRVCGNSHGLIRKYGLMCCRQCFRSNAKDIGFIKY 218
           P+ YG  SR C  CG+   L+R+YGLM CRQCFR  A  IGF KY
Sbjct: 5   PRKYGKASRKCSRCGDHSALVRRYGLMLCRQCFRELAPKIGFKKY 49

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>RS14_ARCFU (O28368) 30S ribosomal protein S14P|
          Length = 51

 Score = 57.4 bits (137), Expect = 2e-08
 Identities = 25/44 (56%), Positives = 29/44 (65%)
 Frame = -1

Query: 349 KNYGPGSRVCRVCGNSHGLIRKYGLMCCRQCFRSNAKDIGFIKY 218
           K +G G+  CR CG   GLIR YGL  CRQCFR  A ++GF KY
Sbjct: 7   KVFGRGANECRRCGRRRGLIRMYGLYLCRQCFREVASELGFKKY 50

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>RS14_METVA (P14041) 30S ribosomal protein S14P|
          Length = 53

 Score = 55.8 bits (133), Expect = 5e-08
 Identities = 26/43 (60%), Positives = 30/43 (69%), Gaps = 1/43 (2%)
 Frame = -1

Query: 343 YGPGSRVCRVCGNSH-GLIRKYGLMCCRQCFRSNAKDIGFIKY 218
           YG GS+VC+ CG    G+IRKYGL  CRQCFR  A  +GF KY
Sbjct: 10  YGQGSKVCKRCGRKGPGIIRKYGLDLCRQCFRELAPKLGFKKY 52

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>RS14_SULTO (Q975J4) 30S ribosomal protein S14P|
          Length = 57

 Score = 55.1 bits (131), Expect = 8e-08
 Identities = 24/45 (53%), Positives = 31/45 (68%)
 Frame = -1

Query: 349 KNYGPGSRVCRVCGNSHGLIRKYGLMCCRQCFRSNAKDIGFIKYR 215
           + YG G +VCR CG+   +I+KYGL  CRQCFR  A ++GF K R
Sbjct: 13  RKYGRGVQVCRRCGSRDSVIQKYGLYLCRQCFREVAYEMGFKKTR 57

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>RS14_SULSO (Q97ZQ5) 30S ribosomal protein S14P|
          Length = 57

 Score = 53.1 bits (126), Expect = 3e-07
 Identities = 21/44 (47%), Positives = 30/44 (68%)
 Frame = -1

Query: 349 KNYGPGSRVCRVCGNSHGLIRKYGLMCCRQCFRSNAKDIGFIKY 218
           + YG G + C+ CG+   +I+KYG+  CRQCFR  A ++GF KY
Sbjct: 13  RKYGKGVQSCQRCGSKDSVIQKYGIYLCRQCFREVAYELGFRKY 56

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>RS14_METJA (P54110) 30S ribosomal protein S14P|
          Length = 53

 Score = 52.0 bits (123), Expect = 7e-07
 Identities = 26/44 (59%), Positives = 29/44 (65%), Gaps = 1/44 (2%)
 Frame = -1

Query: 349 KNYGPGSRVCRVCGN-SHGLIRKYGLMCCRQCFRSNAKDIGFIK 221
           K YG G R C+ CG+   GLIRKYGL  CRQCFR  A  +GF K
Sbjct: 8   KKYGYGIRPCQRCGHVGPGLIRKYGLNLCRQCFREIAHKLGFKK 51

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>RS14_AERPE (P58731) 30S ribosomal protein S14P|
          Length = 54

 Score = 52.0 bits (123), Expect = 7e-07
 Identities = 23/46 (50%), Positives = 29/46 (63%)
 Frame = -1

Query: 352 PKNYGPGSRVCRVCGNSHGLIRKYGLMCCRQCFRSNAKDIGFIKYR 215
           PK  G G++ C+ CG    +I+KYGL  CRQCFR  A  +GF K R
Sbjct: 9   PKRMGRGAQRCQRCGTRDAVIQKYGLYLCRQCFREIAPTLGFRKNR 54

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>RS14_THEVO (Q97BW2) 30S ribosomal protein S14P|
          Length = 53

 Score = 51.2 bits (121), Expect = 1e-06
 Identities = 20/35 (57%), Positives = 24/35 (68%)
 Frame = -1

Query: 322 CRVCGNSHGLIRKYGLMCCRQCFRSNAKDIGFIKY 218
           C  CG   G++RKYGL  CRQCFR  A+ +GF KY
Sbjct: 18  CVRCGRKRGIVRKYGLHLCRQCFRETARQLGFEKY 52

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>RS29_ENCCU (Q8SS73) 40S ribosomal protein S29|
          Length = 55

 Score = 50.8 bits (120), Expect = 1e-06
 Identities = 26/48 (54%), Positives = 30/48 (62%)
 Frame = -1

Query: 361 NSHPKNYGPGSRVCRVCGNSHGLIRKYGLMCCRQCFRSNAKDIGFIKY 218
           +SH K +G GSR C  C    G+IRK  LM CR+CFR  A DIGF  Y
Sbjct: 9   HSHRKPFGKGSRSCVSCYTFRGIIRK--LMMCRRCFREYAGDIGFAIY 54

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>RS14_SULAC (O05635) 30S ribosomal protein S14P|
          Length = 54

 Score = 50.4 bits (119), Expect = 2e-06
 Identities = 21/45 (46%), Positives = 30/45 (66%)
 Frame = -1

Query: 349 KNYGPGSRVCRVCGNSHGLIRKYGLMCCRQCFRSNAKDIGFIKYR 215
           + +G G ++C+ CG+   +I+KYGL  CRQCFR  A  +GF K R
Sbjct: 10  RRFGKGVQLCKRCGSRDSVIQKYGLYLCRQCFREVAYPMGFRKTR 54

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>RS14_THEAC (Q9HIS1) 30S ribosomal protein S14P|
          Length = 53

 Score = 50.1 bits (118), Expect = 2e-06
 Identities = 19/35 (54%), Positives = 24/35 (68%)
 Frame = -1

Query: 322 CRVCGNSHGLIRKYGLMCCRQCFRSNAKDIGFIKY 218
           C  CG   G++R+YGL  CRQCFR  A+ +GF KY
Sbjct: 18  CVRCGRKRGIVRRYGLHLCRQCFRETARQLGFEKY 52

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>RS14_PYRHO (P62013) 30S ribosomal protein S14P|
          Length = 56

 Score = 50.1 bits (118), Expect = 2e-06
 Identities = 22/45 (48%), Positives = 28/45 (62%)
 Frame = -1

Query: 352 PKNYGPGSRVCRVCGNSHGLIRKYGLMCCRQCFRSNAKDIGFIKY 218
           P+ +G G+R C  CG    +IR +GLM CR CFR  A  +GF KY
Sbjct: 11  PRKFGKGARRCIRCGQYGPIIRIHGLMLCRHCFREVAPKLGFRKY 55

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>RS14_PYRAB (P62012) 30S ribosomal protein S14P|
          Length = 56

 Score = 50.1 bits (118), Expect = 2e-06
 Identities = 22/45 (48%), Positives = 28/45 (62%)
 Frame = -1

Query: 352 PKNYGPGSRVCRVCGNSHGLIRKYGLMCCRQCFRSNAKDIGFIKY 218
           P+ +G G+R C  CG    +IR +GLM CR CFR  A  +GF KY
Sbjct: 11  PRKFGKGARRCIRCGQYGPIIRIHGLMLCRHCFREVAPKLGFRKY 55

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>RS14_PYRAE (Q8ZVW1) 30S ribosomal protein S14P|
          Length = 54

 Score = 47.8 bits (112), Expect = 1e-05
 Identities = 21/42 (50%), Positives = 24/42 (57%)
 Frame = -1

Query: 343 YGPGSRVCRVCGNSHGLIRKYGLMCCRQCFRSNAKDIGFIKY 218
           YG     C  CG    +IRKYGL  CR+CFR  A  +GF KY
Sbjct: 12  YGKSKIRCLRCGTREAVIRKYGLYLCRRCFREVAPQLGFKKY 53

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>RS14_HALSA (Q9HPC0) 30S ribosomal protein S14P|
          Length = 52

 Score = 47.8 bits (112), Expect = 1e-05
 Identities = 19/35 (54%), Positives = 23/35 (65%)
 Frame = -1

Query: 322 CRVCGNSHGLIRKYGLMCCRQCFRSNAKDIGFIKY 218
           CR CG   GL+ KY +  CRQCFR  A+ +GF KY
Sbjct: 17  CRRCGREQGLVGKYDIWLCRQCFREIARSMGFKKY 51

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>RS14_HALMA (P26816) 30S ribosomal protein S14P (HmaS14)|
          Length = 61

 Score = 44.7 bits (104), Expect = 1e-04
 Identities = 17/35 (48%), Positives = 23/35 (65%)
 Frame = -1

Query: 322 CRVCGNSHGLIRKYGLMCCRQCFRSNAKDIGFIKY 218
           C+ CG   GL+ KY +  CRQCFR  ++ +GF KY
Sbjct: 26  CQRCGREQGLVGKYDIWLCRQCFREISRGMGFRKY 60

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>RS14_CLOAB (Q97EJ1) 30S ribosomal protein S14|
          Length = 61

 Score = 38.9 bits (89), Expect = 0.006
 Identities = 16/41 (39%), Positives = 22/41 (53%)
 Frame = -1

Query: 364 WNSHPKNYGPGSRVCRVCGNSHGLIRKYGLMCCRQCFRSNA 242
           W   PK        C++CG  H +++KYG+  CR CFR  A
Sbjct: 10  WKKEPKYSTRAYTRCKICGRPHSVLKKYGI--CRICFRELA 48

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>RS14_CLOPE (Q8XHT6) 30S ribosomal protein S14|
          Length = 61

 Score = 37.7 bits (86), Expect = 0.013
 Identities = 16/41 (39%), Positives = 22/41 (53%)
 Frame = -1

Query: 364 WNSHPKNYGPGSRVCRVCGNSHGLIRKYGLMCCRQCFRSNA 242
           W   PK        CR+CG  H +++K+G+  CR CFR  A
Sbjct: 10  WKKEPKYKTRAYTRCRLCGRPHSVLKKFGI--CRICFRELA 48

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>INVO_MOUSE (P48997) Involucrin|
          Length = 467

 Score = 33.5 bits (75), Expect = 0.24
 Identities = 19/60 (31%), Positives = 30/60 (50%)
 Frame = -3

Query: 371 ERLELAPQELRPRIQGLPCLRQLAWPDPQVRADVLQAVLPQQRQGHRLHQVPLRMETSKE 192
           + L L  Q+L    QGL CL Q    +PQ++   L+    QQ+Q  +  Q   + ET ++
Sbjct: 98  QELHLEKQQLPQEPQGLLCLEQQQQQEPQMQEQHLRQQQQQQQQQQQQQQQQQQQETQEQ 157

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>RS14_HELPJ (Q9ZJS5) 30S ribosomal protein S14|
          Length = 61

 Score = 32.7 bits (73), Expect = 0.41
 Identities = 13/29 (44%), Positives = 17/29 (58%)
 Frame = -1

Query: 322 CRVCGNSHGLIRKYGLMCCRQCFRSNAKD 236
           CR+CG  H + R +GL  CR C R  A +
Sbjct: 24  CRICGRPHSVYRDFGL--CRVCLRKMASE 50

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>RS14_MYCGA (O52345) 30S ribosomal protein S14|
          Length = 61

 Score = 31.6 bits (70), Expect = 0.91
 Identities = 12/24 (50%), Positives = 16/24 (66%)
 Frame = -1

Query: 322 CRVCGNSHGLIRKYGLMCCRQCFR 251
           C+ CG  H + RK+G+  CR CFR
Sbjct: 24  CKRCGRPHAVYRKFGI--CRLCFR 45

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>TRFL_PIG (P14632) Lactotransferrin precursor (EC 3.4.21.-) (Lactoferrin)|
          Length = 704

 Score = 31.2 bits (69), Expect = 1.2
 Identities = 17/48 (35%), Positives = 23/48 (47%), Gaps = 9/48 (18%)
 Frame = -1

Query: 337 PGSRVCRVC-GNSHGLI--------RKYGLMCCRQCFRSNAKDIGFIK 221
           PGS +C +C GN  G+         R YG     +C   NA D+ F+K
Sbjct: 512 PGSNLCALCVGNDQGVDKCVPNSNERYYGYTGAFRCLAENAGDVAFVK 559

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>RS14_MYCPU (Q98PZ5) 30S ribosomal protein S14|
          Length = 61

 Score = 31.2 bits (69), Expect = 1.2
 Identities = 12/29 (41%), Positives = 19/29 (65%)
 Frame = -1

Query: 322 CRVCGNSHGLIRKYGLMCCRQCFRSNAKD 236
           C++CG  H ++RK+ +  CR CFR  A +
Sbjct: 24  CQLCGRPHAVLRKFEI--CRICFRKLAHE 50

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>RS14_MYCCT (P10130) 30S ribosomal protein S14|
          Length = 61

 Score = 31.2 bits (69), Expect = 1.2
 Identities = 12/27 (44%), Positives = 17/27 (62%)
 Frame = -1

Query: 322 CRVCGNSHGLIRKYGLMCCRQCFRSNA 242
           C  CG  H +++K+G+  CR CFR  A
Sbjct: 24  CNHCGRPHAVLKKFGI--CRLCFRKFA 48

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>RS14_HELPY (P56021) 30S ribosomal protein S14|
          Length = 61

 Score = 31.2 bits (69), Expect = 1.2
 Identities = 12/24 (50%), Positives = 15/24 (62%)
 Frame = -1

Query: 322 CRVCGNSHGLIRKYGLMCCRQCFR 251
           CR+CG  H + R +GL  CR C R
Sbjct: 24  CRICGRPHSVYRDFGL--CRVCLR 45

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>RS14A_STRCO (P66417) 30S ribosomal protein S14-1|
          Length = 61

 Score = 30.8 bits (68), Expect = 1.6
 Identities = 16/37 (43%), Positives = 19/37 (51%)
 Frame = -1

Query: 352 PKNYGPGSRVCRVCGNSHGLIRKYGLMCCRQCFRSNA 242
           PK    G   C+ CG  H + RK+GL  CR C R  A
Sbjct: 14  PKFGVRGYTRCQRCGRPHSVYRKFGL--CRVCLREMA 48

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>RS14A_STRAW (P66418) 30S ribosomal protein S14-1|
          Length = 61

 Score = 30.8 bits (68), Expect = 1.6
 Identities = 16/37 (43%), Positives = 19/37 (51%)
 Frame = -1

Query: 352 PKNYGPGSRVCRVCGNSHGLIRKYGLMCCRQCFRSNA 242
           PK    G   C+ CG  H + RK+GL  CR C R  A
Sbjct: 14  PKFGVRGYTRCQRCGRPHSVYRKFGL--CRVCLREMA 48

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>RS14A_LISMO (P66401) 30S ribosomal protein S14-1|
          Length = 61

 Score = 30.4 bits (67), Expect = 2.0
 Identities = 14/27 (51%), Positives = 16/27 (59%)
 Frame = -1

Query: 322 CRVCGNSHGLIRKYGLMCCRQCFRSNA 242
           C  CG  H +IRK+ L  CR CFR  A
Sbjct: 24  CERCGRPHSVIRKFKL--CRICFRELA 48

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>RS14A_LISIN (P66402) 30S ribosomal protein S14-1|
          Length = 61

 Score = 30.4 bits (67), Expect = 2.0
 Identities = 14/27 (51%), Positives = 16/27 (59%)
 Frame = -1

Query: 322 CRVCGNSHGLIRKYGLMCCRQCFRSNA 242
           C  CG  H +IRK+ L  CR CFR  A
Sbjct: 24  CERCGRPHSVIRKFKL--CRICFRELA 48

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>RS14A_BACSU (P12878) 30S ribosomal protein S14-1 (BS-A)|
          Length = 60

 Score = 30.4 bits (67), Expect = 2.0
 Identities = 14/27 (51%), Positives = 16/27 (59%)
 Frame = -1

Query: 322 CRVCGNSHGLIRKYGLMCCRQCFRSNA 242
           C  CG  H +IRK+ L  CR CFR  A
Sbjct: 23  CERCGRPHSVIRKFKL--CRICFRELA 47

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>SERC_PHOLL (Q7N6D6) Phosphoserine aminotransferase (EC 2.6.1.52) (PSAT)|
          Length = 362

 Score = 30.0 bits (66), Expect = 2.7
 Identities = 15/37 (40%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
 Frame = +1

Query: 112 VHYIVYRIIK-IGLDEAPQFDDNFLVLASFEVSILNG 219
           VHY     I  I + E P F DN +++A +  SIL+G
Sbjct: 146 VHYCPNETIDGIAIHEQPDFSDNKIIIADYSSSILSG 182

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>RS14_THEMA (Q9ZAE6) 30S ribosomal protein S14|
          Length = 61

 Score = 29.3 bits (64), Expect = 4.5
 Identities = 12/27 (44%), Positives = 16/27 (59%)
 Frame = -1

Query: 322 CRVCGNSHGLIRKYGLMCCRQCFRSNA 242
           C +CG    + R++GL  CR CFR  A
Sbjct: 24  CHICGRPRAVYREFGL--CRICFRKLA 48

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>RS14_BACHD (Q9Z9K1) 30S ribosomal protein S14|
          Length = 61

 Score = 29.3 bits (64), Expect = 4.5
 Identities = 13/27 (48%), Positives = 16/27 (59%)
 Frame = -1

Query: 322 CRVCGNSHGLIRKYGLMCCRQCFRSNA 242
           C  CG  H ++RK+ L  CR CFR  A
Sbjct: 24  CERCGRPHSVMRKFKL--CRICFRELA 48

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>RS14A_STRP8 (P66423) 30S ribosomal protein S14-1|
          Length = 61

 Score = 29.3 bits (64), Expect = 4.5
 Identities = 13/27 (48%), Positives = 15/27 (55%)
 Frame = -1

Query: 322 CRVCGNSHGLIRKYGLMCCRQCFRSNA 242
           C  CG  H + RK+ L  CR CFR  A
Sbjct: 24  CEKCGRPHSVYRKFKL--CRVCFRELA 48

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>RS14A_STRP6 (Q5XEC2) 30S ribosomal protein S14-1|
          Length = 61

 Score = 29.3 bits (64), Expect = 4.5
 Identities = 13/27 (48%), Positives = 15/27 (55%)
 Frame = -1

Query: 322 CRVCGNSHGLIRKYGLMCCRQCFRSNA 242
           C  CG  H + RK+ L  CR CFR  A
Sbjct: 24  CEKCGRPHSVYRKFKL--CRVCFRELA 48

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>RS14A_STRP3 (P66422) 30S ribosomal protein S14-1|
          Length = 61

 Score = 29.3 bits (64), Expect = 4.5
 Identities = 13/27 (48%), Positives = 15/27 (55%)
 Frame = -1

Query: 322 CRVCGNSHGLIRKYGLMCCRQCFRSNA 242
           C  CG  H + RK+ L  CR CFR  A
Sbjct: 24  CEKCGRPHSVYRKFKL--CRVCFRELA 48

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>RS14A_STRP1 (P66421) 30S ribosomal protein S14-1|
          Length = 61

 Score = 29.3 bits (64), Expect = 4.5
 Identities = 13/27 (48%), Positives = 15/27 (55%)
 Frame = -1

Query: 322 CRVCGNSHGLIRKYGLMCCRQCFRSNA 242
           C  CG  H + RK+ L  CR CFR  A
Sbjct: 24  CEKCGRPHSVYRKFKL--CRVCFRELA 48

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>RS14_UREPA (Q9PQP7) 30S ribosomal protein S14|
          Length = 61

 Score = 28.9 bits (63), Expect = 5.9
 Identities = 13/27 (48%), Positives = 16/27 (59%)
 Frame = -1

Query: 322 CRVCGNSHGLIRKYGLMCCRQCFRSNA 242
           C  CG  H + RK+G+  CR CFR  A
Sbjct: 24  CVRCGRPHAVNRKFGV--CRLCFRDLA 48

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>RS14_CAMJE (Q9PLY4) 30S ribosomal protein S14|
          Length = 61

 Score = 28.9 bits (63), Expect = 5.9
 Identities = 10/24 (41%), Positives = 15/24 (62%)
 Frame = -1

Query: 322 CRVCGNSHGLIRKYGLMCCRQCFR 251
           C++CG  H + R +G+  CR C R
Sbjct: 24  CQICGRPHSVYRDFGI--CRVCLR 45

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>C71BJ_ARATH (Q9LTM4) Cytochrome P450 71B19 (EC 1.14.-.-)|
          Length = 502

 Score = 28.9 bits (63), Expect = 5.9
 Identities = 16/45 (35%), Positives = 22/45 (48%), Gaps = 7/45 (15%)
 Frame = -1

Query: 295 LIRKYGLMCCRQ-------CFRSNAKDIGFIKYR*EWKPQRKQGL 182
           ++R + L CC +           + KDIGF  Y  EWK +RK  L
Sbjct: 86  VLRTHDLDCCSRPKLVGTRLLSRDFKDIGFTPYGNEWKARRKFAL 130

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>IF2_BORPE (Q7VYR2) Translation initiation factor IF-2|
          Length = 997

 Score = 28.9 bits (63), Expect = 5.9
 Identities = 15/35 (42%), Positives = 19/35 (54%)
 Frame = +2

Query: 224 DEADVLGVAAEALPAAHQPVLADQAMRVAADTANP 328
           +EA    V AEA PA  +PV A+ A+  AA    P
Sbjct: 112 EEAAAEAVPAEAAPAPAEPVRAEPAVETAAKPVEP 146

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>IF2_BORBR (Q7WHG2) Translation initiation factor IF-2|
          Length = 997

 Score = 28.9 bits (63), Expect = 5.9
 Identities = 15/35 (42%), Positives = 19/35 (54%)
 Frame = +2

Query: 224 DEADVLGVAAEALPAAHQPVLADQAMRVAADTANP 328
           +EA    V AEA PA  +PV A+ A+  AA    P
Sbjct: 112 EEAAAEAVPAEAAPAPAEPVRAEPAVETAAKPVEP 146

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>TOR3A_MOUSE (Q9ER38) Torsin-3A precursor (Torsin family 3 member A)|
           (ATP-dependent interferon-responsive protein)
          Length = 385

 Score = 28.5 bits (62), Expect = 7.7
 Identities = 15/45 (33%), Positives = 21/45 (46%), Gaps = 13/45 (28%)
 Frame = +3

Query: 237 SLALLRKHCLQHISPYLRIRPC-------------ELPQTRQTLD 332
           S  LL+KH + H  P+L +  C             +LP T +TLD
Sbjct: 308 SSGLLKKHLIDHFIPFLPLEYCHVRLCVRDAFLGQDLPYTEETLD 352

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>DCE1_PONPY (Q5R7S7) Glutamate decarboxylase 1 (EC 4.1.1.15)|
          Length = 594

 Score = 28.5 bits (62), Expect = 7.7
 Identities = 19/61 (31%), Positives = 23/61 (37%)
 Frame = -1

Query: 424 SSQLPSLXXXXXXAMGHSNVWNSHPKNYGPGSRVCRVCGNSHGLIRKYGLMCCRQCFRSN 245
           +S  PS       A    N  N  P  Y         CG +HG  RK GL  C    R+N
Sbjct: 2   ASSTPSSSATSSNAGADPNTTNLRPTTYDTW------CGVAHGCTRKLGLKICGFLQRTN 55

Query: 244 A 242
           +
Sbjct: 56  S 56

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>DCE1_PANTR (Q5IS68) Glutamate decarboxylase 1 (EC 4.1.1.15) (Glutamate|
           decarboxylase, 67 kDa isoform) (GAD-67) (67 kDa glutamic
           acid decarboxylase)
          Length = 594

 Score = 28.5 bits (62), Expect = 7.7
 Identities = 19/61 (31%), Positives = 23/61 (37%)
 Frame = -1

Query: 424 SSQLPSLXXXXXXAMGHSNVWNSHPKNYGPGSRVCRVCGNSHGLIRKYGLMCCRQCFRSN 245
           +S  PS       A    N  N  P  Y         CG +HG  RK GL  C    R+N
Sbjct: 2   ASSTPSSSATSSNAGADPNTTNLRPTTYDTW------CGVAHGCTRKLGLKICGFLQRTN 55

Query: 244 A 242
           +
Sbjct: 56  S 56

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>DCE1_HUMAN (Q99259) Glutamate decarboxylase 1 (EC 4.1.1.15) (Glutamate|
           decarboxylase, 67 kDa isoform) (GAD-67) (67 kDa glutamic
           acid decarboxylase)
          Length = 594

 Score = 28.5 bits (62), Expect = 7.7
 Identities = 19/61 (31%), Positives = 23/61 (37%)
 Frame = -1

Query: 424 SSQLPSLXXXXXXAMGHSNVWNSHPKNYGPGSRVCRVCGNSHGLIRKYGLMCCRQCFRSN 245
           +S  PS       A    N  N  P  Y         CG +HG  RK GL  C    R+N
Sbjct: 2   ASSTPSSSATSSNAGADPNTTNLRPTTYDTW------CGVAHGCTRKLGLKICGFLQRTN 55

Query: 244 A 242
           +
Sbjct: 56  S 56

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>DCE1_FELCA (P14748) Glutamate decarboxylase 1 (EC 4.1.1.15) (Glutamate|
           decarboxylase, 67 kDa isoform) (GAD-67) (67 kDa glutamic
           acid decarboxylase)
          Length = 594

 Score = 28.5 bits (62), Expect = 7.7
 Identities = 19/61 (31%), Positives = 23/61 (37%)
 Frame = -1

Query: 424 SSQLPSLXXXXXXAMGHSNVWNSHPKNYGPGSRVCRVCGNSHGLIRKYGLMCCRQCFRSN 245
           +S  PS       A    N  N  P  Y         CG +HG  RK GL  C    R+N
Sbjct: 2   ASSTPSSSATSSNAGADPNTTNLRPTTYDTW------CGVAHGCTRKLGLKICGFLQRTN 55

Query: 244 A 242
           +
Sbjct: 56  S 56

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>RS14_BACST (P54798) 30S ribosomal protein S14 (BS21)|
          Length = 60

 Score = 28.5 bits (62), Expect = 7.7
 Identities = 13/27 (48%), Positives = 15/27 (55%)
 Frame = -1

Query: 322 CRVCGNSHGLIRKYGLMCCRQCFRSNA 242
           C  CG  H + RK+ L  CR CFR  A
Sbjct: 23  CERCGRPHSVYRKFKL--CRICFRELA 47

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>RS14A_STAAW (P66413) 30S ribosomal protein S14-1|
          Length = 61

 Score = 28.5 bits (62), Expect = 7.7
 Identities = 13/27 (48%), Positives = 15/27 (55%)
 Frame = -1

Query: 322 CRVCGNSHGLIRKYGLMCCRQCFRSNA 242
           C  CG  H + RK+ L  CR CFR  A
Sbjct: 24  CERCGRPHSVYRKFKL--CRICFRELA 48

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>RS14A_STAAS (Q6G784) 30S ribosomal protein S14-1|
          Length = 61

 Score = 28.5 bits (62), Expect = 7.7
 Identities = 13/27 (48%), Positives = 15/27 (55%)
 Frame = -1

Query: 322 CRVCGNSHGLIRKYGLMCCRQCFRSNA 242
           C  CG  H + RK+ L  CR CFR  A
Sbjct: 24  CERCGRPHSVYRKFKL--CRICFRELA 48

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>RS14A_STAAR (Q6GEJ6) 30S ribosomal protein S14-1|
          Length = 61

 Score = 28.5 bits (62), Expect = 7.7
 Identities = 13/27 (48%), Positives = 15/27 (55%)
 Frame = -1

Query: 322 CRVCGNSHGLIRKYGLMCCRQCFRSNA 242
           C  CG  H + RK+ L  CR CFR  A
Sbjct: 24  CERCGRPHSVYRKFKL--CRICFRELA 48

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>RS14A_STAAN (P66412) 30S ribosomal protein S14-1|
          Length = 61

 Score = 28.5 bits (62), Expect = 7.7
 Identities = 13/27 (48%), Positives = 15/27 (55%)
 Frame = -1

Query: 322 CRVCGNSHGLIRKYGLMCCRQCFRSNA 242
           C  CG  H + RK+ L  CR CFR  A
Sbjct: 24  CERCGRPHSVYRKFKL--CRICFRELA 48

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>RS14A_STAAM (P66411) 30S ribosomal protein S14-1|
          Length = 61

 Score = 28.5 bits (62), Expect = 7.7
 Identities = 13/27 (48%), Positives = 15/27 (55%)
 Frame = -1

Query: 322 CRVCGNSHGLIRKYGLMCCRQCFRSNA 242
           C  CG  H + RK+ L  CR CFR  A
Sbjct: 24  CERCGRPHSVYRKFKL--CRICFRELA 48

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>RS14A_STAAC (Q5HDX1) 30S ribosomal protein S14-1|
          Length = 61

 Score = 28.5 bits (62), Expect = 7.7
 Identities = 13/27 (48%), Positives = 15/27 (55%)
 Frame = -1

Query: 322 CRVCGNSHGLIRKYGLMCCRQCFRSNA 242
           C  CG  H + RK+ L  CR CFR  A
Sbjct: 24  CERCGRPHSVYRKFKL--CRICFRELA 48

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>C71B4_ARATH (O65786) Cytochrome P450 71B4 (EC 1.14.-.-)|
          Length = 504

 Score = 28.5 bits (62), Expect = 7.7
 Identities = 15/41 (36%), Positives = 20/41 (48%), Gaps = 7/41 (17%)
 Frame = -1

Query: 292 IRKYGLMCCRQ-------CFRSNAKDIGFIKYR*EWKPQRK 191
           ++ + L CC +        F  N KDIGF  Y  EW+  RK
Sbjct: 89  LKTHDLECCSRPITMASRVFSRNGKDIGFGVYGDEWRELRK 129

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>MAS2_AGRRH (P27873) Agropine synthesis conjugase|
          Length = 359

 Score = 28.5 bits (62), Expect = 7.7
 Identities = 11/34 (32%), Positives = 19/34 (55%)
 Frame = +1

Query: 25  QQNYGFQMLKQQSPTWFHGFVTPIQTLTVVHYIV 126
           Q+ +GF++       +FH FV  ++T    HYI+
Sbjct: 234 QERFGFEIHTVDGADFFHSFVETVRTAKRSHYIL 267


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 54,863,649
Number of Sequences: 219361
Number of extensions: 998089
Number of successful extensions: 3304
Number of sequences better than 10.0: 71
Number of HSP's better than 10.0 without gapping: 3146
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3301
length of database: 80,573,946
effective HSP length: 101
effective length of database: 58,418,485
effective search space used: 2628831825
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result