ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags25l12
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1HMCS_ARATH (P54873) Hydroxymethylglutaryl-CoA synthase (EC 2.3.3... 203 3e-52
2HMCS_DICDI (P54872) Hydroxymethylglutaryl-CoA synthase (EC 2.3.3... 101 2e-21
3HMCS1_BLAGE (P54961) Hydroxymethylglutaryl-CoA synthase 1 (EC 2.... 100 5e-21
4HMCS_YEAST (P54839) Hydroxymethylglutaryl-CoA synthase (EC 2.3.3... 98 2e-20
5HMCS1_CRIGR (P13704) Hydroxymethylglutaryl-CoA synthase, cytopla... 96 1e-19
6HMCS1_MOUSE (Q8JZK9) Hydroxymethylglutaryl-CoA synthase, cytopla... 95 2e-19
7HMCS1_RAT (P17425) Hydroxymethylglutaryl-CoA synthase, cytoplasm... 95 2e-19
8HMCS2_RAT (P22791) Hydroxymethylglutaryl-CoA synthase, mitochond... 94 4e-19
9HMCS2_MOUSE (P54869) Hydroxymethylglutaryl-CoA synthase, mitocho... 94 4e-19
10HMCS1_PONPY (Q5R7Z9) Hydroxymethylglutaryl-CoA synthase, cytopla... 92 1e-18
11HMCS1_HUMAN (Q01581) Hydroxymethylglutaryl-CoA synthase, cytopla... 92 1e-18
12HMCS2_HUMAN (P54868) Hydroxymethylglutaryl-CoA synthase, mitocho... 92 2e-18
13HMCS2_PIG (O02734) Hydroxymethylglutaryl-CoA synthase, mitochond... 91 3e-18
14HMCS_SCHPO (P54874) Hydroxymethylglutaryl-CoA synthase (EC 2.3.3... 90 5e-18
15HMCS1_CHICK (P23228) Hydroxymethylglutaryl-CoA synthase, cytopla... 87 4e-17
16HMCS2_BLAGE (P54870) Hydroxymethylglutaryl-CoA synthase 2 (EC 2.... 82 2e-15
17HMCS_CAEEL (P54871) Hydroxymethylglutaryl-CoA synthase (EC 2.3.3... 69 2e-11
18MANB_CALSA (P22533) Beta-mannanase/endoglucanase A precursor [In... 33 0.71
19Y535_SULSO (Q9UWU0) UPF0219 protein SSO0535 32 1.2
20ACSF2_SYNEL (Q8DI68) Magnesium-protoporphyrin IX monomethyl este... 32 1.6
21Y1349_SULTO (Q971K8) UPF0219 protein ST1349 32 1.6
22Y1546_METJA (Q58941) UPF0219 protein MJ1546 32 2.1
23BRAT_DROME (Q8MQJ9) Brain tumor protein 32 2.1
24Y871_METMA (Q8PYJ0) UPF0219 protein MM0871 31 2.7
25Y4041_METAC (Q8TIV0) UPF0219 protein MA4041 31 2.7
26PKSG_BACSU (P40830) Putative polyketide biosynthesis protein pksG 31 3.5
27Y674_VIBPA (Q87RV2) UPF0255 protein VP0674 30 4.6
28DXR_GLUOX (Q5FPZ1) 1-deoxy-D-xylulose 5-phosphate reductoisomera... 30 6.0
29TAT2_YEAST (P38967) Tryptophan permease (Tryptophan amino acid t... 30 6.0
30MSC6_YEAST (Q08818) Meiotic sister-chromatid recombination prote... 30 7.9
312SSL_PICGL (P26986) 2S seed storage-like protein precursor 30 7.9 
>HMCS_ARATH (P54873) Hydroxymethylglutaryl-CoA synthase (EC 2.3.3.10) (HMG-CoA|
           synthase) (3-hydroxy-3-methylglutaryl coenzyme A
           synthase)
          Length = 461

 Score =  203 bits (517), Expect = 3e-52
 Identities = 96/150 (64%), Positives = 124/150 (82%), Gaps = 2/150 (1%)
 Frame = -1

Query: 636 VQPTTLIPKQLGNMYTASLYAAFASVVHNKHDALVGQRIVMFSYGSGMTSTMFSLKINEV 457
           VQPTTLIPK++GNMYTASLYAAFAS++H KH+ L G+R+VMFSYGSG T+TMFSL++N+ 
Sbjct: 314 VQPTTLIPKEVGNMYTASLYAAFASLIHKKHNDLAGKRVVMFSYGSGSTATMFSLRLNDN 373

Query: 456 EHPFSLSNIASILDISNKLESRHVVPPKKFVEALKLMEHRYGAKDFITSQD--TRLLVPG 283
           + PFS+SNIAS++D+  KL++RH   P+KFVE +KLMEHRYGAKDF+T+++    LL PG
Sbjct: 374 KPPFSISNIASVMDVGGKLKARHEYAPEKFVETMKLMEHRYGAKDFVTTKEGIIDLLAPG 433

Query: 282 TYYLTHVDSMYRRFYAVKGDAAATPITNGH 193
           TYYL  VDS+YRRFY  KG+  +  + NGH
Sbjct: 434 TYYLKEVDSLYRRFYGKKGEDGS--VANGH 461
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>HMCS_DICDI (P54872) Hydroxymethylglutaryl-CoA synthase (EC 2.3.3.10) (HMG-CoA|
           synthase) (3-hydroxy-3-methylglutaryl coenzyme A
           synthase) (Fragment)
          Length = 163

 Score =  101 bits (251), Expect = 2e-21
 Identities = 53/126 (42%), Positives = 80/126 (63%)
 Frame = -1

Query: 636 VQPTTLIPKQLGNMYTASLYAAFASVVHNKHDALVGQRIVMFSYGSGMTSTMFSLKINEV 457
           V PTTL+ KQLGN Y  S Y+   S++  K + LVG+R++ FSYGSG+ ++ FS K   V
Sbjct: 10  VAPTTLLAKQLGNTYCGSTYSGLLSLLDEKSNDLVGKRVLTFSYGSGLAASAFSFK---V 66

Query: 456 EHPFSLSNIASILDISNKLESRHVVPPKKFVEALKLMEHRYGAKDFITSQDTRLLVPGTY 277
           E P  +++I   +D+ N+L  R  V P+ F E L L E R+  K+++ S +T  + PG++
Sbjct: 67  EKP--INHIVEKVDLKNRLAKRVRVEPEIFTEKLSLRETRHNLKNYVPSDETTNMFPGSF 124

Query: 276 YLTHVD 259
           YL+ VD
Sbjct: 125 YLSSVD 130
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>HMCS1_BLAGE (P54961) Hydroxymethylglutaryl-CoA synthase 1 (EC 2.3.3.10)|
           (HMG-CoA synthase 1) (3-hydroxy-3-methylglutaryl
           coenzyme A synthase 1)
          Length = 453

 Score =  100 bits (248), Expect = 5e-21
 Identities = 54/135 (40%), Positives = 82/135 (60%), Gaps = 3/135 (2%)
 Frame = -1

Query: 633 QPTTLIPKQLGNMYTASLYAAFASVVHNKH-DALVGQRIVMFSYGSGMTSTMFSLKIN-E 460
           +P+ L+  Q+GNMYT SLY    S++ +K    L G+R+ +FSYGSG+ S+MFSL+I+ +
Sbjct: 314 KPSLLLANQVGNMYTPSLYGGLVSLLVSKSAQELAGKRVALFSYGSGLASSMFSLRISSD 373

Query: 459 VEHPFSLSNIASILD-ISNKLESRHVVPPKKFVEALKLMEHRYGAKDFITSQDTRLLVPG 283
                SL  + S L  I  +L+ RH V P++F + ++  EH +    +       +L PG
Sbjct: 374 ASAKSSLQRLVSNLSHIKPQLDLRHKVSPEEFAQTMETREHNHHKAPYTPEGSIDVLFPG 433

Query: 282 TYYLTHVDSMYRRFY 238
           T+YL  VDS+YRR Y
Sbjct: 434 TWYLESVDSLYRRSY 448
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>HMCS_YEAST (P54839) Hydroxymethylglutaryl-CoA synthase (EC 2.3.3.10) (HMG-CoA|
           synthase) (3-hydroxy-3-methylglutaryl coenzyme A
           synthase)
          Length = 491

 Score = 98.2 bits (243), Expect = 2e-20
 Identities = 57/138 (41%), Positives = 84/138 (60%), Gaps = 2/138 (1%)
 Frame = -1

Query: 636 VQPTTLIPKQLGNMYTASLYAAFASVVHNK-HDALVGQRIVMFSYGSGMTSTMFSLKI-N 463
           V  + ++P   GNMYTAS+YAAFAS+++    D L G+R+ +FSYGSG+ ++++S KI  
Sbjct: 359 VAQSLIVPTNTGNMYTASVYAAFASLLNYVGSDDLQGKRVGLFSYGSGLAASLYSCKIVG 418

Query: 462 EVEHPFSLSNIASILDISNKLESRHVVPPKKFVEALKLMEHRYGAKDFITSQDTRLLVPG 283
           +V+H      I   LDI+NKL  R    PK +  A++L E+ +  K+F        L  G
Sbjct: 419 DVQH------IIKELDITNKLAKRITETPKDYEAAIELRENAHLKKNFKPQGSIEHLQSG 472

Query: 282 TYYLTHVDSMYRRFYAVK 229
            YYLT++D  +RR Y VK
Sbjct: 473 VYYLTNIDDKFRRSYDVK 490
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>HMCS1_CRIGR (P13704) Hydroxymethylglutaryl-CoA synthase, cytoplasmic (EC|
           2.3.3.10) (HMG-CoA synthase) (3-hydroxy-3-methylglutaryl
           coenzyme A synthase)
          Length = 520

 Score = 95.5 bits (236), Expect = 1e-19
 Identities = 59/150 (39%), Positives = 85/150 (56%), Gaps = 3/150 (2%)
 Frame = -1

Query: 621 LIPKQLGNMYTASLYAAFASVVHN-KHDALVGQRIVMFSYGSGMTSTMFSLKINEVEHPF 445
           L+  Q GNMYT+S+Y + ASV+       L G+RI +FSYGSG+ +T++SLK+ +   P 
Sbjct: 336 LVSNQNGNMYTSSVYGSLASVLAQYSPQQLAGKRIGVFSYGSGLAATLYSLKVTQDATPG 395

Query: 444 SLSN--IASILDISNKLESRHVVPPKKFVEALKLMEHRYGAKDFITSQDTRLLVPGTYYL 271
           S  +   AS+ D+ ++L+SR  V P  F E +KL E  +   ++I       L  GT+YL
Sbjct: 396 SALDKVTASLCDLKSRLDSRTCVAPDVFAENMKLREDTHHLANYIPQCSIDSLFEGTWYL 455

Query: 270 THVDSMYRRFYAVKGDAAATPITNGH*LID 181
             VD  +RR YA +      P TN H L D
Sbjct: 456 VRVDEKHRRTYARR------PSTNDHNLGD 479
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>HMCS1_MOUSE (Q8JZK9) Hydroxymethylglutaryl-CoA synthase, cytoplasmic (EC|
           2.3.3.10) (HMG-CoA synthase) (3-hydroxy-3-methylglutaryl
           coenzyme A synthase)
          Length = 520

 Score = 95.1 bits (235), Expect = 2e-19
 Identities = 56/146 (38%), Positives = 83/146 (56%), Gaps = 3/146 (2%)
 Frame = -1

Query: 621 LIPKQLGNMYTASLYAAFASVVHN-KHDALVGQRIVMFSYGSGMTSTMFSLKINEVEHPF 445
           L+  Q GNMYT+S+Y + ASV+       L G+R+ +FSYGSG+ +T++SLK+ +   P 
Sbjct: 336 LVSNQNGNMYTSSVYGSLASVLAQYSPQQLAGKRVGVFSYGSGLAATLYSLKVTQDATPG 395

Query: 444 SLSN--IASILDISNKLESRHVVPPKKFVEALKLMEHRYGAKDFITSQDTRLLVPGTYYL 271
           S  +   AS+ D+ ++L+SR  V P  F E +KL E  +   ++I       L  GT+YL
Sbjct: 396 SALDKITASLCDLKSRLDSRTCVAPDVFAENMKLREDTHHLANYIPQCSIDSLFEGTWYL 455

Query: 270 THVDSMYRRFYAVKGDAAATPITNGH 193
             VD  +RR YA +      P TN H
Sbjct: 456 VRVDEKHRRTYARR------PFTNDH 475
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>HMCS1_RAT (P17425) Hydroxymethylglutaryl-CoA synthase, cytoplasmic (EC|
           2.3.3.10) (HMG-CoA synthase) (3-hydroxy-3-methylglutaryl
           coenzyme A synthase)
          Length = 520

 Score = 94.7 bits (234), Expect = 2e-19
 Identities = 57/146 (39%), Positives = 83/146 (56%), Gaps = 3/146 (2%)
 Frame = -1

Query: 621 LIPKQLGNMYTASLYAAFASVVHN-KHDALVGQRIVMFSYGSGMTSTMFSLKINEVEHPF 445
           L+  Q GNMYT+S+Y + ASV+       L G+RI +FSYGSG+ +T++SLK+ +   P 
Sbjct: 336 LVSNQNGNMYTSSVYGSLASVLAQYSPQQLAGKRIGVFSYGSGLAATLYSLKVTQDATPG 395

Query: 444 SLSN--IASILDISNKLESRHVVPPKKFVEALKLMEHRYGAKDFITSQDTRLLVPGTYYL 271
           S  +   AS+ D+ ++L+SR  V P  F E +KL E  +   ++I       L  GT+YL
Sbjct: 396 SALDKITASLCDLKSRLDSRTCVAPDVFAENMKLREDTHHLANYIPQCSIDSLFEGTWYL 455

Query: 270 THVDSMYRRFYAVKGDAAATPITNGH 193
             VD  +RR YA +      P TN H
Sbjct: 456 VRVDEKHRRTYARR------PSTNDH 475
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>HMCS2_RAT (P22791) Hydroxymethylglutaryl-CoA synthase, mitochondrial|
           precursor (EC 2.3.3.10) (HMG-CoA synthase)
           (3-hydroxy-3-methylglutaryl coenzyme A synthase)
          Length = 508

 Score = 93.6 bits (231), Expect = 4e-19
 Identities = 51/126 (40%), Positives = 75/126 (59%), Gaps = 3/126 (2%)
 Frame = -1

Query: 603 GNMYTASLYAAFASVV-HNKHDALVGQRIVMFSYGSGMTSTMFSLKINEVEHPFSLSN-- 433
           GNMYT+SLY   AS++ H+    L G RI  FSYGSG+ ++ FS ++++   P S     
Sbjct: 379 GNMYTSSLYGCLASLLSHHSAQELAGSRIGAFSYGSGLAASFFSFRVSKDASPGSPLEKL 438

Query: 432 IASILDISNKLESRHVVPPKKFVEALKLMEHRYGAKDFITSQDTRLLVPGTYYLTHVDSM 253
           ++S+ D+  +L+SR  + P++F E +   E  Y   +F    DT  L PGT+YL  VD M
Sbjct: 439 VSSVSDLPKRLDSRRRMSPEEFTEIMNQREQFYHKVNFSPPGDTSNLFPGTWYLERVDEM 498

Query: 252 YRRFYA 235
           +RR YA
Sbjct: 499 HRRKYA 504
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>HMCS2_MOUSE (P54869) Hydroxymethylglutaryl-CoA synthase, mitochondrial|
           precursor (EC 2.3.3.10) (HMG-CoA synthase)
           (3-hydroxy-3-methylglutaryl coenzyme A synthase)
          Length = 508

 Score = 93.6 bits (231), Expect = 4e-19
 Identities = 51/126 (40%), Positives = 75/126 (59%), Gaps = 3/126 (2%)
 Frame = -1

Query: 603 GNMYTASLYAAFASVV-HNKHDALVGQRIVMFSYGSGMTSTMFSLKINEVEHPFSLSN-- 433
           GNMYT+SLY   AS++ H+    L G RI  FSYGSG+ ++ FS ++++   P S     
Sbjct: 379 GNMYTSSLYGCLASLLSHHSAQELAGSRIGAFSYGSGLAASFFSFRVSKDASPGSPLEKL 438

Query: 432 IASILDISNKLESRHVVPPKKFVEALKLMEHRYGAKDFITSQDTRLLVPGTYYLTHVDSM 253
           ++S+ D+  +L+SR  + P++F E +   E  Y   +F    DT  L PGT+YL  VD M
Sbjct: 439 VSSVSDLPKRLDSRRRMSPEEFTEIMNQREQFYHKVNFSPPGDTSNLFPGTWYLERVDEM 498

Query: 252 YRRFYA 235
           +RR YA
Sbjct: 499 HRRKYA 504
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>HMCS1_PONPY (Q5R7Z9) Hydroxymethylglutaryl-CoA synthase, cytoplasmic (EC|
           2.3.3.10) (HMG-CoA synthase) (3-hydroxy-3-methylglutaryl
           coenzyme A synthase)
          Length = 520

 Score = 92.0 bits (227), Expect = 1e-18
 Identities = 53/132 (40%), Positives = 78/132 (59%), Gaps = 3/132 (2%)
 Frame = -1

Query: 621 LIPKQLGNMYTASLYAAFASVVHN-KHDALVGQRIVMFSYGSGMTSTMFSLKINEVEHPF 445
           L+  Q GNMYT+S+Y + ASV+       L G+RI +FSYGSG+ +T++SLK+ +   P 
Sbjct: 336 LVSNQNGNMYTSSVYGSLASVLAQYSPQQLAGKRIGVFSYGSGLAATLYSLKVTQDATPG 395

Query: 444 SLSN--IASILDISNKLESRHVVPPKKFVEALKLMEHRYGAKDFITSQDTRLLVPGTYYL 271
           S  +   AS+ D+ ++L+SR  V P  F E +KL E  +   ++I       L  GT+YL
Sbjct: 396 SALDKITASLCDLKSRLDSRTGVAPDVFAENMKLREDTHHLVNYIPQGSIDSLFEGTWYL 455

Query: 270 THVDSMYRRFYA 235
             VD  +RR YA
Sbjct: 456 VRVDEKHRRTYA 467
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>HMCS1_HUMAN (Q01581) Hydroxymethylglutaryl-CoA synthase, cytoplasmic (EC|
           2.3.3.10) (HMG-CoA synthase) (3-hydroxy-3-methylglutaryl
           coenzyme A synthase)
          Length = 520

 Score = 92.0 bits (227), Expect = 1e-18
 Identities = 53/132 (40%), Positives = 78/132 (59%), Gaps = 3/132 (2%)
 Frame = -1

Query: 621 LIPKQLGNMYTASLYAAFASVVHN-KHDALVGQRIVMFSYGSGMTSTMFSLKINEVEHPF 445
           L+  Q GNMYT+S+Y + ASV+       L G+RI +FSYGSG+ +T++SLK+ +   P 
Sbjct: 336 LVSNQNGNMYTSSVYGSLASVLAQYSPQQLAGKRIGVFSYGSGLAATLYSLKVTQDATPG 395

Query: 444 SLSN--IASILDISNKLESRHVVPPKKFVEALKLMEHRYGAKDFITSQDTRLLVPGTYYL 271
           S  +   AS+ D+ ++L+SR  V P  F E +KL E  +   ++I       L  GT+YL
Sbjct: 396 SALDKITASLCDLKSRLDSRTGVAPDVFAENMKLREDTHHLVNYIPQGSIDSLFEGTWYL 455

Query: 270 THVDSMYRRFYA 235
             VD  +RR YA
Sbjct: 456 VRVDEKHRRTYA 467
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>HMCS2_HUMAN (P54868) Hydroxymethylglutaryl-CoA synthase, mitochondrial|
           precursor (EC 2.3.3.10) (HMG-CoA synthase)
           (3-hydroxy-3-methylglutaryl coenzyme A synthase)
          Length = 508

 Score = 91.7 bits (226), Expect = 2e-18
 Identities = 51/126 (40%), Positives = 73/126 (57%), Gaps = 3/126 (2%)
 Frame = -1

Query: 603 GNMYTASLYAAFASVV-HNKHDALVGQRIVMFSYGSGMTSTMFSLKINEVEHPFSLSN-- 433
           GNMYT+SLY   AS++ H+    L G RI  FSYGSG+ ++ FS ++++   P S  +  
Sbjct: 379 GNMYTSSLYGCLASLLSHHSAQELAGSRIGAFSYGSGLAASFFSFRVSQDAAPGSPLDKL 438

Query: 432 IASILDISNKLESRHVVPPKKFVEALKLMEHRYGAKDFITSQDTRLLVPGTYYLTHVDSM 253
           ++S  D+  +L SR  V P++F E +   E  Y   +F    DT  L PGT+YL  VD  
Sbjct: 439 VSSTSDLPKRLASRKCVSPEEFTEIMNQREQFYHKVNFSPPGDTNSLFPGTWYLERVDEQ 498

Query: 252 YRRFYA 235
           +RR YA
Sbjct: 499 HRRKYA 504
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>HMCS2_PIG (O02734) Hydroxymethylglutaryl-CoA synthase, mitochondrial|
           precursor (EC 2.3.3.10) (HMG-CoA synthase)
           (3-hydroxy-3-methylglutaryl coenzyme A synthase)
          Length = 508

 Score = 90.9 bits (224), Expect = 3e-18
 Identities = 51/136 (37%), Positives = 76/136 (55%), Gaps = 3/136 (2%)
 Frame = -1

Query: 633 QPTTLIPKQLGNMYTASLYAAFASVVHN-KHDALVGQRIVMFSYGSGMTSTMFSLKINEV 457
           +P+  +    GNMYT+SLY   AS++       L G RI  FSYGSG+ ++ +SL++++ 
Sbjct: 369 KPSLYLSLHNGNMYTSSLYGCLASLLSQCSAQDLAGSRIGAFSYGSGLAASFYSLRVSQD 428

Query: 456 EHPFSLSN--IASILDISNKLESRHVVPPKKFVEALKLMEHRYGAKDFITSQDTRLLVPG 283
             P S     ++S+ D+  +L SR  V P++F E +   E  Y   +F    D   L PG
Sbjct: 429 ASPGSPLEKLVSSVSDLPERLASRKRVSPEEFTEIMNQREQYYHKVNFTPPGDPNSLFPG 488

Query: 282 TYYLTHVDSMYRRFYA 235
           T+YL  VD +YRR YA
Sbjct: 489 TWYLERVDELYRRKYA 504
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>HMCS_SCHPO (P54874) Hydroxymethylglutaryl-CoA synthase (EC 2.3.3.10) (HMG-CoA|
           synthase) (3-hydroxy-3-methylglutaryl coenzyme A
           synthase)
          Length = 447

 Score = 90.1 bits (222), Expect = 5e-18
 Identities = 48/137 (35%), Positives = 77/137 (56%), Gaps = 1/137 (0%)
 Frame = -1

Query: 636 VQPTTLIPKQLGNMYTASLYAAFASVVHN-KHDALVGQRIVMFSYGSGMTSTMFSLKINE 460
           V P+   P   GNMYTAS+++   +++     D L G+R+  +SYGSG+ ++ FS  +  
Sbjct: 315 VSPSVYAPTNCGNMYTASIFSCLTALLSRVPADELKGKRVGAYSYGSGLAASFFSFVVKG 374

Query: 459 VEHPFSLSNIASILDISNKLESRHVVPPKKFVEALKLMEHRYGAKDFITSQDTRLLVPGT 280
                 +S IA   ++ N L++RH + P ++ EA++L    +  K+F        L  GT
Sbjct: 375 -----DVSEIAKKTNLVNDLDNRHCLTPTQYEEAIELRHQAHLKKNFTPKGSIERLRSGT 429

Query: 279 YYLTHVDSMYRRFYAVK 229
           YYLT +D M+RR Y+VK
Sbjct: 430 YYLTGIDDMFRRSYSVK 446
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>HMCS1_CHICK (P23228) Hydroxymethylglutaryl-CoA synthase, cytoplasmic (EC|
           2.3.3.10) (HMG-CoA synthase) (3-hydroxy-3-methylglutaryl
           coenzyme A synthase)
          Length = 522

 Score = 87.0 bits (214), Expect = 4e-17
 Identities = 51/152 (33%), Positives = 81/152 (53%), Gaps = 3/152 (1%)
 Frame = -1

Query: 621 LIPKQLGNMYTASLYAAFASVVHN-KHDALVGQRIVMFSYGSGMTSTMFSLKINEVEHPF 445
           L+  Q GNMYT S+Y   AS++     + L GQRI  FSYGSG  +T++S+++ +   P 
Sbjct: 337 LVSNQNGNMYTPSVYGCLASLLAQYSPEHLAGQRISEFSYGSGFAATLYSIRVTQDATPG 396

Query: 444 SLSN--IASILDISNKLESRHVVPPKKFVEALKLMEHRYGAKDFITSQDTRLLVPGTYYL 271
           S  +   AS+ D+  +L+SR  + P  F E +K+ +  +   ++I       L  GT+YL
Sbjct: 397 SALDKITASLSDLKARLDSRKCIAPDVFAENMKIRQETHHLANYIPQCSVEDLFEGTWYL 456

Query: 270 THVDSMYRRFYAVKGDAAATPITNGH*LIDSG 175
             VD  +RR YA +      P+  G  ++  G
Sbjct: 457 VRVDEKHRRTYARRPVMGDGPLEAGVEVVHPG 488
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>HMCS2_BLAGE (P54870) Hydroxymethylglutaryl-CoA synthase 2 (EC 2.3.3.10)|
           (HMG-CoA synthase 2) (3-hydroxy-3-methylglutaryl
           coenzyme A synthase 2)
          Length = 455

 Score = 81.6 bits (200), Expect = 2e-15
 Identities = 45/135 (33%), Positives = 75/135 (55%), Gaps = 3/135 (2%)
 Frame = -1

Query: 633 QPTTLIPKQLGNMYTASLYAAFASVVHNKH-DALVGQRIVMFSYGSGMTSTMFSLKINEV 457
           +P+ ++  Q+GNMYT SLY    S++ ++    L G+ I MFSYGSG  ++MFSL I+  
Sbjct: 318 KPSLMLANQVGNMYTTSLYGGLVSLLISEDIGELAGKCICMFSYGSGFAASMFSLHISTD 377

Query: 456 EHPFSLSN--IASILDISNKLESRHVVPPKKFVEALKLMEHRYGAKDFITSQDTRLLVPG 283
             P S  +  + ++  I  +++ R  + P +F   +++ E  +    +        L PG
Sbjct: 378 SSPGSTLSRLVTNLTHIKPQVQQRVKLSPGEFENIMEIREQNHHKAPYTPVASPNTLFPG 437

Query: 282 TYYLTHVDSMYRRFY 238
           T+YL  +DSM+RR Y
Sbjct: 438 TWYLESIDSMHRRKY 452
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>HMCS_CAEEL (P54871) Hydroxymethylglutaryl-CoA synthase (EC 2.3.3.10) (HMG-CoA|
           synthase) (3-hydroxy-3-methylglutaryl coenzyme A
           synthase)
          Length = 462

 Score = 68.6 bits (166), Expect = 2e-11
 Identities = 41/146 (28%), Positives = 75/146 (51%), Gaps = 1/146 (0%)
 Frame = -1

Query: 630 PTTLIPKQLGNMYTASLYAAFASVVHNKHDALVGQR-IVMFSYGSGMTSTMFSLKINEVE 454
           P  +  +++GNMYT SL+A   + +    D + G++ I+ F+YGSG+ S +F  ++ +  
Sbjct: 317 PYLVFNRRIGNMYTPSLFAQLLAYLA-ADDCVTGEKSILFFAYGSGLASAIFPGRVRQTS 375

Query: 453 HPFSLSNIASILDISNKLESRHVVPPKKFVEALKLMEHRYGAKDFITSQDTRLLVPGTYY 274
           +   +  +A  +    +L+ R    P++F E L+  E    +K+   S     L P TY+
Sbjct: 376 NLDKIRQVA--IRAIKRLDDRIQFTPEEFTETLQKREVFLRSKEIPKSPSETSLFPNTYF 433

Query: 273 LTHVDSMYRRFYAVKGDAAATPITNG 196
           L ++D +YRR Y +  +       NG
Sbjct: 434 LDNMDKLYRRSYTLHEEPNGVQNGNG 459
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>MANB_CALSA (P22533) Beta-mannanase/endoglucanase A precursor [Includes: Mannan|
           endo-1,4-beta-mannosidase A (EC 3.2.1.78)
           (Beta-mannanase) (Endo-1,4-mannanase);
           Endo-1,4-beta-glucanase (EC 3.2.1.4) (Cellulase)]
          Length = 1331

 Score = 33.1 bits (74), Expect = 0.71
 Identities = 18/62 (29%), Positives = 27/62 (43%), Gaps = 3/62 (4%)
 Frame = -2

Query: 413 SPTNWSLGMWFHXXXXXXXXXXXSTATAPRTSSPART---RACSFRVPTTSPMSTPCTAG 243
           +PT W  G W+             T+T   T +P  T      +   PT +P+STP T+G
Sbjct: 308 NPTPW--GQWYKTNAIGTSSTPTPTSTVTPTPTPTPTPTPTVTATPTPTPTPVSTPATSG 365

Query: 242 SM 237
            +
Sbjct: 366 QI 367
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>Y535_SULSO (Q9UWU0) UPF0219 protein SSO0535|
          Length = 350

 Score = 32.3 bits (72), Expect = 1.2
 Identities = 19/54 (35%), Positives = 29/54 (53%)
 Frame = -1

Query: 621 LIPKQLGNMYTASLYAAFASVVHNKHDALVGQRIVMFSYGSGMTSTMFSLKINE 460
           L+   +GN Y AS     A V+     A  G+RI++  +GSG  S  FS+ ++E
Sbjct: 262 LVSPYIGNPYNASALLGLAKVLDI---AKPGERILVAPFGSGAGSDAFSILVSE 312
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>ACSF2_SYNEL (Q8DI68) Magnesium-protoporphyrin IX monomethyl ester [oxidative]|
           cyclase 2 (EC 1.14.13.81) (Mg-protoporphyrin IX
           monomethyl ester oxidative cyclase 2)
          Length = 354

 Score = 32.0 bits (71), Expect = 1.6
 Identities = 16/48 (33%), Positives = 30/48 (62%)
 Frame = -1

Query: 480 FSLKINEVEHPFSLSNIASILDISNKLESRHVVPPKKFVEALKLMEHR 337
           FS+ +N V+HP   S +   ++ISNKL++       K+++AL+ + H+
Sbjct: 282 FSVVLN-VDHPEFYSRLQRCVEISNKLQAIEATHQPKWLKALRKLPHQ 328
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>Y1349_SULTO (Q971K8) UPF0219 protein ST1349|
          Length = 348

 Score = 32.0 bits (71), Expect = 1.6
 Identities = 19/54 (35%), Positives = 28/54 (51%)
 Frame = -1

Query: 621 LIPKQLGNMYTASLYAAFASVVHNKHDALVGQRIVMFSYGSGMTSTMFSLKINE 460
           L+   +GN Y AS     A V+     A  GQRI++  +GSG  S  FS+ + +
Sbjct: 260 LVSPYIGNPYNASALLGLAKVLDI---AKPGQRILVAPFGSGAGSDAFSILVTD 310
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>Y1546_METJA (Q58941) UPF0219 protein MJ1546|
          Length = 345

 Score = 31.6 bits (70), Expect = 2.1
 Identities = 16/54 (29%), Positives = 29/54 (53%)
 Frame = -1

Query: 621 LIPKQLGNMYTASLYAAFASVVHNKHDALVGQRIVMFSYGSGMTSTMFSLKINE 460
           L+   +GN Y+ ++    ++V+ N      G+RI+  SYGSG  S  F + + +
Sbjct: 259 LLTPYIGNTYSGAVPLGLSNVLDNCEG---GERILAVSYGSGAGSDAFDITVTD 309
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>BRAT_DROME (Q8MQJ9) Brain tumor protein|
          Length = 1037

 Score = 31.6 bits (70), Expect = 2.1
 Identities = 29/109 (26%), Positives = 46/109 (42%), Gaps = 15/109 (13%)
 Frame = -1

Query: 621 LIPKQLGNMYTASLYAAFASVVHNK---------HDALVGQRIVMFSYGSGMTSTMFSLK 469
           L+PK+ G  YT S  +A ++V H            D L        S  S +     SL 
Sbjct: 659 LMPKRGGGGYTGSNGSATSAVAHYNPYEKWSNGGSDNLFSSVTSGVSGSSAVADAFASLS 718

Query: 468 ------INEVEHPFSLSNIASILDISNKLESRHVVPPKKFVEALKLMEH 340
                 ++      S  +  S+LD++NKL S  + PPK  ++  K++ H
Sbjct: 719 AVGGSVVSGAGAGGSTVSSESLLDLTNKLLSATIYPPKSQIKRQKMIYH 767
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>Y871_METMA (Q8PYJ0) UPF0219 protein MM0871|
          Length = 349

 Score = 31.2 bits (69), Expect = 2.7
 Identities = 18/59 (30%), Positives = 30/59 (50%)
 Frame = -1

Query: 636 VQPTTLIPKQLGNMYTASLYAAFASVVHNKHDALVGQRIVMFSYGSGMTSTMFSLKINE 460
           + P  ++PK +GN Y+ S     A+ +     A  G RI   ++GSG  S  FS+ + +
Sbjct: 258 ITPGLVVPK-IGNTYSGSCLMGIAATLDQ---AKPGDRIFATAFGSGAGSDAFSITVTD 312
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>Y4041_METAC (Q8TIV0) UPF0219 protein MA4041|
          Length = 349

 Score = 31.2 bits (69), Expect = 2.7
 Identities = 18/59 (30%), Positives = 30/59 (50%)
 Frame = -1

Query: 636 VQPTTLIPKQLGNMYTASLYAAFASVVHNKHDALVGQRIVMFSYGSGMTSTMFSLKINE 460
           + P  ++PK +GN Y+ S     A+ +     A  G RI   ++GSG  S  FS+ + +
Sbjct: 258 ITPGLVVPK-IGNTYSGSCLMGIAATLDQ---AKPGDRIFATAFGSGAGSDAFSITVTD 312
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>PKSG_BACSU (P40830) Putative polyketide biosynthesis protein pksG|
          Length = 420

 Score = 30.8 bits (68), Expect = 3.5
 Identities = 20/55 (36%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
 Frame = -1

Query: 636 VQPTTLIPKQLGNMYTASLYAAFASVV-HNKHDALVGQRIVMFSYGSGMTSTMFS 475
           V+P     +++GN+  A+L+ A AS +   + D    +RI  FSYGSG  S  +S
Sbjct: 284 VKPGLNYCQRVGNIMGAALFLALASTIDQGRFDT--PKRIGCFSYGSGCCSEFYS 336
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>Y674_VIBPA (Q87RV2) UPF0255 protein VP0674|
          Length = 415

 Score = 30.4 bits (67), Expect = 4.6
 Identities = 25/99 (25%), Positives = 46/99 (46%), Gaps = 7/99 (7%)
 Frame = -1

Query: 597 MYTASLYAAFASVVHNKHD--ALVGQRIVMFSYGSGMTSTMFSLKINEVEHPFSLSNIAS 424
           ++TASL  + A   H K+D  AL  Q +   +Y  G   T +++K  ++E P+    I +
Sbjct: 125 LFTASLCFSIAGYPHLKNDNLALQAQVLANKAYSEGAEKTQYTIK--QIEVPYQKRKIIA 182

Query: 423 ILDISNKLESRHVVPPKKFVEAL-----KLMEHRYGAKD 322
            L +    +   VV     +++L     +L  + +  KD
Sbjct: 183 NLHLPRTDKQLPVVMVSAGLDSLQTDMWRLFRNHFAPKD 221
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>DXR_GLUOX (Q5FPZ1) 1-deoxy-D-xylulose 5-phosphate reductoisomerase (EC|
           1.1.1.267) (DXP reductoisomerase)
           (1-deoxyxylulose-5-phosphate reductoisomerase)
           (2-C-methyl-D-erythritol 4-phosphate synthase)
          Length = 408

 Score = 30.0 bits (66), Expect = 6.0
 Identities = 15/35 (42%), Positives = 20/35 (57%)
 Frame = +1

Query: 235 GIEPAVHGVDMGEVVGTRNEQARVLAGDEVLGAVA 339
           G+EP +     G  V   N++A V AGD +L AVA
Sbjct: 112 GLEPTLAAARNGHAVALANKEALVCAGDVMLRAVA 146
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>TAT2_YEAST (P38967) Tryptophan permease (Tryptophan amino acid transporter)|
          Length = 592

 Score = 30.0 bits (66), Expect = 6.0
 Identities = 12/35 (34%), Positives = 19/35 (54%)
 Frame = -3

Query: 595 VYGVTLCCFCISCPQ*T*CSGGPENRHVFLRQWHD 491
           +  +T+C F I C     C GGP++  +  + WHD
Sbjct: 227 IKAITVCGFIILCVVLI-CGGGPDHEFIGAKYWHD 260
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>MSC6_YEAST (Q08818) Meiotic sister-chromatid recombination protein 6,|
           mitochondrial precursor
          Length = 692

 Score = 29.6 bits (65), Expect = 7.9
 Identities = 17/43 (39%), Positives = 21/43 (48%)
 Frame = -1

Query: 636 VQPTTLIPKQLGNMYTASLYAAFASVVHNKHDALVGQRIVMFS 508
           V+P   + KQLG    A  YA F S   NK D  V +   +FS
Sbjct: 529 VEPIRQLYKQLGTHLNARNYADFISAEFNKPDGTVAEAKNLFS 571
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>2SSL_PICGL (P26986) 2S seed storage-like protein precursor|
          Length = 172

 Score = 29.6 bits (65), Expect = 7.9
 Identities = 15/42 (35%), Positives = 23/42 (54%)
 Frame = -3

Query: 334 RRQGLHHQPGHALARSGYLLPHPCRLHVPPVLCRERRCGRHS 209
           RR+G   +   A+ R+ YL P+ C +  PP  C  +R  R+S
Sbjct: 125 RREGRGREEEEAMERAAYL-PNTCNVREPPRRCDIQRHSRYS 165


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 95,492,160
Number of Sequences: 219361
Number of extensions: 2036881
Number of successful extensions: 5263
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 5067
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5229
length of database: 80,573,946
effective HSP length: 107
effective length of database: 57,102,319
effective search space used: 5938641176
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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