| Clone Name | rbags25l04 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AK072950.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023146L07, full insert sequence Length = 2099 Score = 408 bits (206), Expect = e-111 Identities = 332/374 (88%) Strand = Plus / Minus Query: 266 gtgtagcttcaagctgcaaccttcttgcagtggttttcgagccactccatggtgacactc 325 |||||||||||||| ||| ||||||||||||||||||| ||||||||||||||||||||| Sbjct: 1744 gtgtagcttcaagcagcagccttcttgcagtggttttccagccactccatggtgacactc 1685 Query: 326 ttcggtctttcaagcggcagaccaagggcacggtcccagatgagctgagatccaattcct 385 ||||||||||| |||||||||||||| ||||||||||| |||||||| ||||| || ||| Sbjct: 1684 ttcggtctttcgagcggcagaccaagagcacggtcccaaatgagctgggatcctatgcct 1625 Query: 386 atgctccttgagacgccgaacaagacagtgtagtatcgtgcttcagttaatccgaagtgg 445 |||||||| || || ||||| | ||| ||||| || || ||||||| |||||| |||||| Sbjct: 1624 atgctcctcgaaactccgaaaaggacggtgtaataccgagcttcagataatccaaagtgg 1565 Query: 446 ttaagcaacactccactgtgagcatcgacattaggccatgggttttttaccttgcccaac 505 || |||| ||||||||||||||||| |||||||||||||||||||| |||||||| | | Sbjct: 1564 ttcagcagaactccactgtgagcatcaacattaggccatgggtttttgaccttgccaagc 1505 Query: 506 tcggtgaggatcggaggcacaacttcatacaacttggagaccagttggaaaagtgggtcc 565 || |||||||| |||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 1504 tcagtgaggattggaggcacaacttcatacaacttggagaccagttggaaaagtggatcc 1445 Query: 566 tccggtaaatacttcaatgcaaactccctttggcacgagtatcgtggatctgtattgcgt 625 || || || |||||||| ||||||||||| || || | ||||||||||| || || ||| Sbjct: 1444 tcaggcaagtacttcaaagcaaactccctctgacatgtatatcgtggatcggtcttacgt 1385 Query: 626 agaactccatgacc 639 |||||||||||||| Sbjct: 1384 agaactccatgacc 1371
>ref|XM_464443.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1419 Score = 377 bits (190), Expect = e-101 Identities = 322/366 (87%) Strand = Plus / Minus Query: 274 tcaagctgcaaccttcttgcagtggttttcgagccactccatggtgacactcttcggtct 333 |||||| |||||||||||||||||||| || ||||||||||||||||||||||||||||| Sbjct: 1419 tcaagcagcaaccttcttgcagtggttctccagccactccatggtgacactcttcggtct 1360 Query: 334 ttcaagcggcagaccaagggcacggtcccagatgagctgagatccaattcctatgctcct 393 ||| |||||||| ||||| ||||||||||| |||||||||||||| ||||| |||||||| Sbjct: 1359 ttcgagcggcaggccaagagcacggtcccaaatgagctgagatcctattccaatgctcct 1300 Query: 394 tgagacgccgaacaagacagtgtagtatcgtgcttcagttaatccgaagtggttaagcaa 453 ||| || ||||| | |||||||| || || ||||||| |||||| |||||||| || | Sbjct: 1299 tgaaactccgaaaagaacagtgtaataccgagcttcagataatccaaagtggttcagtag 1240 Query: 454 cactccactgtgagcatcgacattaggccatgggttttttaccttgcccaactcggtgag 513 ||||| ||||||||||| |||||||||||||||||||| |||||||| | ||| ||||| Sbjct: 1239 aactccgctgtgagcatcaacattaggccatgggtttttgaccttgccaagctcagtgag 1180 Query: 514 gatcggaggcacaacttcatacaacttggagaccagttggaaaagtgggtcctccggtaa 573 ||| |||||||||||||||||||||||||||||||||||||||||||| ||||| || || Sbjct: 1179 gataggaggcacaacttcatacaacttggagaccagttggaaaagtggatcctcaggcaa 1120 Query: 574 atacttcaatgcaaactccctttggcacgagtatcgtggatctgtattgcgtagaactcc 633 |||||||| ||||||||||| || || | || |||||||| || || ||||||||||| Sbjct: 1119 gtacttcaaagcaaactccctctgacatgtataccgtggatcggtcttacgtagaactcc 1060 Query: 634 atgacc 639 |||||| Sbjct: 1059 atgacc 1054
>gb|AY753182.1| Oryza sativa (japonica cultivar-group) citrate synthase mRNA, complete cds Length = 1477 Score = 377 bits (190), Expect = e-101 Identities = 322/366 (87%) Strand = Plus / Minus Query: 274 tcaagctgcaaccttcttgcagtggttttcgagccactccatggtgacactcttcggtct 333 |||||| |||||||||||||||||||| || ||||||||||||||||||||||||||||| Sbjct: 1470 tcaagcagcaaccttcttgcagtggttctccagccactccatggtgacactcttcggtct 1411 Query: 334 ttcaagcggcagaccaagggcacggtcccagatgagctgagatccaattcctatgctcct 393 ||| |||||||| ||||| ||||||||||| |||||||||||||| ||||| |||||||| Sbjct: 1410 ttcgagcggcaggccaagagcacggtcccaaatgagctgagatcctattccaatgctcct 1351 Query: 394 tgagacgccgaacaagacagtgtagtatcgtgcttcagttaatccgaagtggttaagcaa 453 ||| || ||||| | |||||||| || || ||||||| |||||| |||||||| || | Sbjct: 1350 tgaaactccgaaaagaacagtgtaataccgagcttcagataatccaaagtggttcagtag 1291 Query: 454 cactccactgtgagcatcgacattaggccatgggttttttaccttgcccaactcggtgag 513 ||||| ||||||||||| |||||||||||||||||||| |||||||| | ||| ||||| Sbjct: 1290 aactccgctgtgagcatcaacattaggccatgggtttttgaccttgccaagctcagtgag 1231 Query: 514 gatcggaggcacaacttcatacaacttggagaccagttggaaaagtgggtcctccggtaa 573 ||| |||||||||||||||||||||||||||||||||||||||||||| ||||| || || Sbjct: 1230 gataggaggcacaacttcatacaacttggagaccagttggaaaagtggatcctcaggcaa 1171 Query: 574 atacttcaatgcaaactccctttggcacgagtatcgtggatctgtattgcgtagaactcc 633 |||||||| ||||||||||| || || | || |||||||| || || ||||||||||| Sbjct: 1170 gtacttcaaagcaaactccctctgacatgtataccgtggatcggtcttacgtagaactcc 1111 Query: 634 atgacc 639 |||||| Sbjct: 1110 atgacc 1105
>gb|AF302906.1|AF302906 Oryza sativa citrate synthase mRNA, complete cds Length = 1523 Score = 377 bits (190), Expect = e-101 Identities = 322/366 (87%) Strand = Plus / Minus Query: 274 tcaagctgcaaccttcttgcagtggttttcgagccactccatggtgacactcttcggtct 333 |||||| |||||||||||||||||||| || ||||||||||||||||||||||||||||| Sbjct: 1523 tcaagcagcaaccttcttgcagtggttctccagccactccatggtgacactcttcggtct 1464 Query: 334 ttcaagcggcagaccaagggcacggtcccagatgagctgagatccaattcctatgctcct 393 ||| |||||||| ||||| ||||||||||| |||||||||||||| ||||| |||||||| Sbjct: 1463 ttcgagcggcaggccaagagcacggtcccaaatgagctgagatcctattccaatgctcct 1404 Query: 394 tgagacgccgaacaagacagtgtagtatcgtgcttcagttaatccgaagtggttaagcaa 453 ||| || ||||| | |||||||| || || ||||||| |||||| |||||||| || | Sbjct: 1403 tgaaactccgaaaagaacagtgtaataccgagcttcagataatccaaagtggttcagtag 1344 Query: 454 cactccactgtgagcatcgacattaggccatgggttttttaccttgcccaactcggtgag 513 ||||| ||||||||||| |||||||||||||||||||| |||||||| | ||| ||||| Sbjct: 1343 aactccgctgtgagcatcaacattaggccatgggtttttgaccttgccaagctcagtgag 1284 Query: 514 gatcggaggcacaacttcatacaacttggagaccagttggaaaagtgggtcctccggtaa 573 ||| |||||||||||||||||||||||||||||||||||||||||||| ||||| || || Sbjct: 1283 gataggaggcacaacttcatacaacttggagaccagttggaaaagtggatcctcaggcaa 1224 Query: 574 atacttcaatgcaaactccctttggcacgagtatcgtggatctgtattgcgtagaactcc 633 |||||||| ||||||||||| || || | || |||||||| || || ||||||||||| Sbjct: 1223 gtacttcaaagcaaactccctctgacatgtataccgtggatcggtcttacgtagaactcc 1164 Query: 634 atgacc 639 |||||| Sbjct: 1163 atgacc 1158
>gb|AY104057.1| Zea mays PCO125766 mRNA sequence Length = 1481 Score = 305 bits (154), Expect = 9e-80 Identities = 301/350 (86%) Strand = Plus / Minus Query: 287 ttcttgcagtggttttcgagccactccatggtgacactcttcggtctttcaagcggcaga 346 |||||||||| ||| || |||||||||||||| ||||||||||| || ||||| ||||| Sbjct: 1122 ttcttgcagtagttctccagccactccatggtaacactcttcggcctctcaagtggcagg 1063 Query: 347 ccaagggcacggtcccagatgagctgagatccaattcctatgctccttgagacgccgaac 406 |||||||||||||||||||||||||| ||||| || || ||||| || || || |||||| Sbjct: 1062 ccaagggcacggtcccagatgagctgggatcctatccccatgcttctcgaaacaccgaac 1003 Query: 407 aagacagtgtagtatcgtgcttcagttaatccgaagtggttaagcaacactccactgtga 466 ||||||||||| || |||||||||| || ||| |||||||| ||||| |||||||||||| Sbjct: 1002 aagacagtgtaataccgtgcttcagatagtccaaagtggttcagcaaaactccactgtga 943 Query: 467 gcatcgacattaggccatgggttttttaccttgcccaactcggtgaggatcggaggcaca 526 ||||| ||||| ||||| ||||| || ||||| || | ||| |||||||||||||| || Sbjct: 942 gcatcaacattcggccacgggttcttgacctttcctagctcagtgaggatcggaggtacg 883 Query: 527 acttcatacaacttggagaccagttggaaaagtgggtcctccggtaaatacttcaatgca 586 |||||||| |||||||| ||||||||||||||||| ||||| || |||| ||||| ||| Sbjct: 882 acttcatataacttggacaccagttggaaaagtggatcctcgggcaaatgcttcagggca 823 Query: 587 aactccctttggcacgagtatcgtggatctgtattgcgtagaactccatg 636 ||||||||||| || || || ||||| ||||| ||||| ||||||||||| Sbjct: 822 aactccctttgacatgaataccgtgggtctgtcttgcgcagaactccatg 773
>gb|BT016982.1| Zea mays clone EK07D2304B02.c mRNA sequence Length = 976 Score = 297 bits (150), Expect = 2e-77 Identities = 304/354 (85%), Gaps = 1/354 (0%) Strand = Plus / Minus Query: 287 ttcttgcagtggttttcgagccactcc-atggtgacactcttcggtctttcaagcggcag 345 |||||||||| ||| || ||||||||| ||||| ||||||||||| || ||||| ||||| Sbjct: 631 ttcttgcagtagttctccagccactcccatggtaacactcttcggcctctcaagtggcag 572 Query: 346 accaagggcacggtcccagatgagctgagatccaattcctatgctccttgagacgccgaa 405 |||||||||||||||||||||||||||||||| || || ||||| ||||| | ||||| Sbjct: 571 gccaagggcacggtcccagatgagctgagatcctatccccatgcttcttgaacccccgaa 512 Query: 406 caagacagtgtagtatcgtgcttcagttaatccgaagtggttaagcaacactccactgtg 465 |||||||||||| | |||||||||| || ||| |||||||| ||||| ||||||||||| Sbjct: 511 caagacagtgtaatcccgtgcttcagatagtccaaagtggttcagcaaaactccactgtg 452 Query: 466 agcatcgacattaggccatgggttttttaccttgcccaactcggtgaggatcggaggcac 525 |||||| ||||| ||||||||||| || |||||||||| ||| |||||||| ||||| || Sbjct: 451 agcatcaacatttggccatgggttcttgaccttgcccagctcagtgaggataggaggtac 392 Query: 526 aacttcatacaacttggagaccagttggaaaagtgggtcctccggtaaatacttcaatgc 585 |||||||||||||||||| |||| |||||||||||| |||| || |||| ||||| || Sbjct: 391 aacttcatacaacttggacaccaattggaaaagtggatccttgggcaaatgcttcagggc 332 Query: 586 aaactccctttggcacgagtatcgtggatctgtattgcgtagaactccatgacc 639 |||||||||||| || || || ||||| || || || || |||||||||||||| Sbjct: 331 aaactccctttgacatgaataccgtgggtcggtcttacgcagaactccatgacc 278
>gb|BT018332.1| Zea mays clone EL01T0402A06.c mRNA sequence Length = 1288 Score = 297 bits (150), Expect = 2e-77 Identities = 300/350 (85%) Strand = Plus / Minus Query: 287 ttcttgcagtggttttcgagccactccatggtgacactcttcggtctttcaagcggcaga 346 |||||||||| ||| || |||||||||||||| ||||||||||| || ||||| ||||| Sbjct: 1010 ttcttgcagtagttctccagccactccatggtaacactcttcggcctctcaagtggcagg 951 Query: 347 ccaagggcacggtcccagatgagctgagatccaattcctatgctccttgagacgccgaac 406 |||||||||||||||||||||||||| ||||| || || ||||| || || || |||||| Sbjct: 950 ccaagggcacggtcccagatgagctgggatcctatccccatgcttctcgaaacaccgaac 891 Query: 407 aagacagtgtagtatcgtgcttcagttaatccgaagtggttaagcaacactccactgtga 466 ||||||||||| || ||||||||| || ||| |||||||| ||||| |||||||||||| Sbjct: 890 aagacagtgtaataccgtgcttcaaatagtccaaagtggttcagcaaaactccactgtga 831 Query: 467 gcatcgacattaggccatgggttttttaccttgcccaactcggtgaggatcggaggcaca 526 ||||| ||||| ||||| ||||| || ||||| || | ||| |||||||||||||| || Sbjct: 830 gcatcaacattcggccacgggttcttgacctttcctagctcagtgaggatcggaggtacg 771 Query: 527 acttcatacaacttggagaccagttggaaaagtgggtcctccggtaaatacttcaatgca 586 |||||||| |||||||| ||||||||||||||||| ||||| || |||| ||||| ||| Sbjct: 770 acttcatataacttggacaccagttggaaaagtggatcctcgggcaaatgcttcagggca 711 Query: 587 aactccctttggcacgagtatcgtggatctgtattgcgtagaactccatg 636 ||||||||||| || || || ||||| ||||| ||||| ||||||||||| Sbjct: 710 aactccctttgacatgaataccgtgggtctgtcttgcgcagaactccatg 661
>emb|X84227.1|PHCITSYNH Populus hybrid mRNA for citrate synthase Length = 1378 Score = 184 bits (93), Expect = 2e-43 Identities = 288/353 (81%) Strand = Plus / Minus Query: 287 ttcttgcagtggttttcgagccactccatggtgacactcttcggtctttcaagcggcaga 346 ||||||||||| || || ||| | ||||| || |||||||| || || || ||||||| Sbjct: 1019 ttcttgcagtgattctcaagcaattccattgtaacactctttggcctctccagcggcaat 960 Query: 347 ccaagggcacggtcccagatgagctgagatccaattcctatgctccttgagacgccgaac 406 ||||| || || ||||| || |||||||| | ||| || || |||||||| || ||||| Sbjct: 959 ccaagagctcgatcccatatcagctgagagcaaatgccaatactccttgatacaccgaaa 900 Query: 407 aagacagtgtagtatcgtgcttcagttaatccgaagtggttaagcaacactccactgtga 466 | ||||| ||||| | ||||||||||| ||| ||| ||| |||||||| ||||||||| Sbjct: 899 agtacagtatagtacctagcttcagttaaaccgtagtagttcagcaacaccccactgtga 840 Query: 467 gcatcgacattaggccatgggttttttaccttgcccaactcggtgaggatcggaggcaca 526 ||||| |||||||||||||||||||| |||||||||| || ||| || | ||||| ||| Sbjct: 839 gcatcaacattaggccatgggtttttaaccttgcccagctgggtaagaactggaggtaca 780 Query: 527 acttcatacaacttggagaccagttggaaaagtgggtcctccggtaaatacttcaatgca 586 |||||||| | ||| |||||||| ||||| | ||| || || ||||||| |||||||||| Sbjct: 779 acttcatatagcttagagaccagctggaacaatggatcatcaggtaaatgcttcaatgca 720 Query: 587 aactccctttggcacgagtatcgtggatctgtattgcgtagaactccatgacc 639 ||||||||||| || | |||| ||| | || |||||||||||||||||||| Sbjct: 719 aactccctttgacatgtatatcttggtacagttttgcgtagaactccatgacc 667
>gb|AC134925.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0041J17, complete sequence Length = 148829 Score = 165 bits (83), Expect = 2e-37 Identities = 101/107 (94%) Strand = Plus / Minus Query: 266 gtgtagcttcaagctgcaaccttcttgcagtggttttcgagccactccatggtgacactc 325 |||||||||||||| ||| ||||||||||||||||||| ||||||||||||||||||||| Sbjct: 93517 gtgtagcttcaagcagcagccttcttgcagtggttttccagccactccatggtgacactc 93458 Query: 326 ttcggtctttcaagcggcagaccaagggcacggtcccagatgagctg 372 ||||||||||| |||||||||||||| ||||||||||| |||||||| Sbjct: 93457 ttcggtctttcgagcggcagaccaagagcacggtcccaaatgagctg 93411 Score = 89.7 bits (45), Expect = 1e-14 Identities = 66/73 (90%) Strand = Plus / Minus Query: 425 gcttcagttaatccgaagtggttaagcaacactccactgtgagcatcgacattaggccat 484 ||||||| |||||| |||||||| |||| ||||||||||||||||| |||||||||||| Sbjct: 93154 gcttcagataatccaaagtggttcagcagaactccactgtgagcatcaacattaggccat 93095 Query: 485 gggttttttacct 497 |||||||| |||| Sbjct: 93094 gggtttttgacct 93082 Score = 85.7 bits (43), Expect = 2e-13 Identities = 82/95 (86%) Strand = Plus / Minus Query: 545 accagttggaaaagtgggtcctccggtaaatacttcaatgcaaactccctttggcacgag 604 ||||||||||||||||| ||||| || || |||||||| ||||||||||| || || | Sbjct: 92863 accagttggaaaagtggatcctcaggcaagtacttcaaagcaaactccctctgacatgta 92804 Query: 605 tatcgtggatctgtattgcgtagaactccatgacc 639 ||||||||||| || || ||||||||||||||||| Sbjct: 92803 tatcgtggatcggtcttacgtagaactccatgacc 92769 Score = 79.8 bits (40), Expect = 1e-11 Identities = 52/56 (92%) Strand = Plus / Minus Query: 492 ttaccttgcccaactcggtgaggatcggaggcacaacttcatacaacttggagacc 547 |||||||||| | ||| |||||||| |||||||||||||||||||||||||||||| Sbjct: 93002 ttaccttgccaagctcagtgaggattggaggcacaacttcatacaacttggagacc 92947
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 165 bits (83), Expect = 2e-37 Identities = 101/107 (94%) Strand = Plus / Minus Query: 266 gtgtagcttcaagctgcaaccttcttgcagtggttttcgagccactccatggtgacactc 325 |||||||||||||| ||| ||||||||||||||||||| ||||||||||||||||||||| Sbjct: 18990319 gtgtagcttcaagcagcagccttcttgcagtggttttccagccactccatggtgacactc 18990260 Query: 326 ttcggtctttcaagcggcagaccaagggcacggtcccagatgagctg 372 ||||||||||| |||||||||||||| ||||||||||| |||||||| Sbjct: 18990259 ttcggtctttcgagcggcagaccaagagcacggtcccaaatgagctg 18990213 Score = 89.7 bits (45), Expect = 1e-14 Identities = 66/73 (90%) Strand = Plus / Minus Query: 425 gcttcagttaatccgaagtggttaagcaacactccactgtgagcatcgacattaggccat 484 ||||||| |||||| |||||||| |||| ||||||||||||||||| |||||||||||| Sbjct: 18989956 gcttcagataatccaaagtggttcagcagaactccactgtgagcatcaacattaggccat 18989897 Query: 485 gggttttttacct 497 |||||||| |||| Sbjct: 18989896 gggtttttgacct 18989884 Score = 85.7 bits (43), Expect = 2e-13 Identities = 82/95 (86%) Strand = Plus / Minus Query: 545 accagttggaaaagtgggtcctccggtaaatacttcaatgcaaactccctttggcacgag 604 ||||||||||||||||| ||||| || || |||||||| ||||||||||| || || | Sbjct: 18989665 accagttggaaaagtggatcctcaggcaagtacttcaaagcaaactccctctgacatgta 18989606 Query: 605 tatcgtggatctgtattgcgtagaactccatgacc 639 ||||||||||| || || ||||||||||||||||| Sbjct: 18989605 tatcgtggatcggtcttacgtagaactccatgacc 18989571 Score = 79.8 bits (40), Expect = 1e-11 Identities = 52/56 (92%) Strand = Plus / Minus Query: 492 ttaccttgcccaactcggtgaggatcggaggcacaacttcatacaacttggagacc 547 |||||||||| | ||| |||||||| |||||||||||||||||||||||||||||| Sbjct: 18989804 ttaccttgccaagctcagtgaggattggaggcacaacttcatacaacttggagacc 18989749 Score = 54.0 bits (27), Expect = 6e-04 Identities = 27/27 (100%) Strand = Plus / Plus Query: 515 atcggaggcacaacttcatacaacttg 541 ||||||||||||||||||||||||||| Sbjct: 23521509 atcggaggcacaacttcatacaacttg 23521535 Score = 44.1 bits (22), Expect = 0.56 Identities = 43/50 (86%) Strand = Plus / Plus Query: 545 accagttggaaaagtgggtcctccggtaaatacttcaatgcaaactccct 594 ||||||||||||||||| ||||| || || || |||| || ||||||||| Sbjct: 23521618 accagttggaaaagtggatcctcaggcaagtaattcagtgtaaactccct 23521667 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 455 actccactgtgagcatcgacatta 478 ||||||||||||||||| |||||| Sbjct: 23521355 actccactgtgagcatcaacatta 23521378
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 165 bits (83), Expect = 2e-37 Identities = 101/107 (94%) Strand = Plus / Minus Query: 266 gtgtagcttcaagctgcaaccttcttgcagtggttttcgagccactccatggtgacactc 325 |||||||||||||| ||| ||||||||||||||||||| ||||||||||||||||||||| Sbjct: 19148968 gtgtagcttcaagcagcagccttcttgcagtggttttccagccactccatggtgacactc 19148909 Query: 326 ttcggtctttcaagcggcagaccaagggcacggtcccagatgagctg 372 ||||||||||| |||||||||||||| ||||||||||| |||||||| Sbjct: 19148908 ttcggtctttcgagcggcagaccaagagcacggtcccaaatgagctg 19148862 Score = 89.7 bits (45), Expect = 1e-14 Identities = 66/73 (90%) Strand = Plus / Minus Query: 425 gcttcagttaatccgaagtggttaagcaacactccactgtgagcatcgacattaggccat 484 ||||||| |||||| |||||||| |||| ||||||||||||||||| |||||||||||| Sbjct: 19148605 gcttcagataatccaaagtggttcagcagaactccactgtgagcatcaacattaggccat 19148546 Query: 485 gggttttttacct 497 |||||||| |||| Sbjct: 19148545 gggtttttgacct 19148533 Score = 85.7 bits (43), Expect = 2e-13 Identities = 82/95 (86%) Strand = Plus / Minus Query: 545 accagttggaaaagtgggtcctccggtaaatacttcaatgcaaactccctttggcacgag 604 ||||||||||||||||| ||||| || || |||||||| ||||||||||| || || | Sbjct: 19148314 accagttggaaaagtggatcctcaggcaagtacttcaaagcaaactccctctgacatgta 19148255 Query: 605 tatcgtggatctgtattgcgtagaactccatgacc 639 ||||||||||| || || ||||||||||||||||| Sbjct: 19148254 tatcgtggatcggtcttacgtagaactccatgacc 19148220 Score = 79.8 bits (40), Expect = 1e-11 Identities = 52/56 (92%) Strand = Plus / Minus Query: 492 ttaccttgcccaactcggtgaggatcggaggcacaacttcatacaacttggagacc 547 |||||||||| | ||| |||||||| |||||||||||||||||||||||||||||| Sbjct: 19148453 ttaccttgccaagctcagtgaggattggaggcacaacttcatacaacttggagacc 19148398 Score = 54.0 bits (27), Expect = 6e-04 Identities = 27/27 (100%) Strand = Plus / Plus Query: 515 atcggaggcacaacttcatacaacttg 541 ||||||||||||||||||||||||||| Sbjct: 23831445 atcggaggcacaacttcatacaacttg 23831471 Score = 44.1 bits (22), Expect = 0.56 Identities = 43/50 (86%) Strand = Plus / Plus Query: 545 accagttggaaaagtgggtcctccggtaaatacttcaatgcaaactccct 594 ||||||||||||||||| ||||| || || || |||| || ||||||||| Sbjct: 23831554 accagttggaaaagtggatcctcaggcaagtaattcagtgtaaactccct 23831603 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 455 actccactgtgagcatcgacatta 478 ||||||||||||||||| |||||| Sbjct: 23831291 actccactgtgagcatcaacatta 23831314
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 157 bits (79), Expect = 5e-35 Identities = 100/107 (93%) Strand = Plus / Plus Query: 266 gtgtagcttcaagctgcaaccttcttgcagtggttttcgagccactccatggtgacactc 325 |||||||||||||| |||||||||||||||||||| || ||||||||||||||||||||| Sbjct: 5243056 gtgtagcttcaagcagcaaccttcttgcagtggttctccagccactccatggtgacactc 5243115 Query: 326 ttcggtctttcaagcggcagaccaagggcacggtcccagatgagctg 372 ||||||||||| |||||||| ||||| ||||||||||| |||||||| Sbjct: 5243116 ttcggtctttcgagcggcaggccaagagcacggtcccaaatgagctg 5243162 Score = 79.8 bits (40), Expect = 1e-11 Identities = 52/56 (92%) Strand = Plus / Plus Query: 492 ttaccttgcccaactcggtgaggatcggaggcacaacttcatacaacttggagacc 547 |||||||||| | ||| |||||||| |||||||||||||||||||||||||||||| Sbjct: 5243629 ttaccttgccaagctcagtgaggataggaggcacaacttcatacaacttggagacc 5243684 Score = 77.8 bits (39), Expect = 4e-11 Identities = 81/95 (85%) Strand = Plus / Plus Query: 545 accagttggaaaagtgggtcctccggtaaatacttcaatgcaaactccctttggcacgag 604 ||||||||||||||||| ||||| || || |||||||| ||||||||||| || || | Sbjct: 5243761 accagttggaaaagtggatcctcaggcaagtacttcaaagcaaactccctctgacatgta 5243820 Query: 605 tatcgtggatctgtattgcgtagaactccatgacc 639 || |||||||| || || ||||||||||||||||| Sbjct: 5243821 taccgtggatcggtcttacgtagaactccatgacc 5243855 Score = 73.8 bits (37), Expect = 6e-10 Identities = 64/73 (87%) Strand = Plus / Plus Query: 425 gcttcagttaatccgaagtggttaagcaacactccactgtgagcatcgacattaggccat 484 ||||||| |||||| |||||||| || | ||||| ||||||||||| |||||||||||| Sbjct: 5243456 gcttcagataatccaaagtggttcagtagaactccgctgtgagcatcaacattaggccat 5243515 Query: 485 gggttttttacct 497 |||||||| |||| Sbjct: 5243516 gggtttttgacct 5243528 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 92 tgccaagtttgacagattgactga 115 ||||||||||||||||||| |||| Sbjct: 8308034 tgccaagtttgacagattggctga 8308057 Score = 40.1 bits (20), Expect = 8.7 Identities = 32/36 (88%) Strand = Plus / Plus Query: 370 ctgagatccaattcctatgctccttgagacgccgaa 405 ||||||||| ||||| ||||||||||| || ||||| Sbjct: 5243280 ctgagatcctattccaatgctccttgaaactccgaa 5243315
>dbj|AP000366.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0437H03 Length = 170173 Score = 157 bits (79), Expect = 5e-35 Identities = 100/107 (93%) Strand = Plus / Plus Query: 266 gtgtagcttcaagctgcaaccttcttgcagtggttttcgagccactccatggtgacactc 325 |||||||||||||| |||||||||||||||||||| || ||||||||||||||||||||| Sbjct: 136509 gtgtagcttcaagcagcaaccttcttgcagtggttctccagccactccatggtgacactc 136568 Query: 326 ttcggtctttcaagcggcagaccaagggcacggtcccagatgagctg 372 ||||||||||| |||||||| ||||| ||||||||||| |||||||| Sbjct: 136569 ttcggtctttcgagcggcaggccaagagcacggtcccaaatgagctg 136615 Score = 79.8 bits (40), Expect = 1e-11 Identities = 52/56 (92%) Strand = Plus / Plus Query: 492 ttaccttgcccaactcggtgaggatcggaggcacaacttcatacaacttggagacc 547 |||||||||| | ||| |||||||| |||||||||||||||||||||||||||||| Sbjct: 137082 ttaccttgccaagctcagtgaggataggaggcacaacttcatacaacttggagacc 137137 Score = 77.8 bits (39), Expect = 4e-11 Identities = 81/95 (85%) Strand = Plus / Plus Query: 545 accagttggaaaagtgggtcctccggtaaatacttcaatgcaaactccctttggcacgag 604 ||||||||||||||||| ||||| || || |||||||| ||||||||||| || || | Sbjct: 137214 accagttggaaaagtggatcctcaggcaagtacttcaaagcaaactccctctgacatgta 137273 Query: 605 tatcgtggatctgtattgcgtagaactccatgacc 639 || |||||||| || || ||||||||||||||||| Sbjct: 137274 taccgtggatcggtcttacgtagaactccatgacc 137308 Score = 73.8 bits (37), Expect = 6e-10 Identities = 64/73 (87%) Strand = Plus / Plus Query: 425 gcttcagttaatccgaagtggttaagcaacactccactgtgagcatcgacattaggccat 484 ||||||| |||||| |||||||| || | ||||| ||||||||||| |||||||||||| Sbjct: 136909 gcttcagataatccaaagtggttcagtagaactccgctgtgagcatcaacattaggccat 136968 Query: 485 gggttttttacct 497 |||||||| |||| Sbjct: 136969 gggtttttgacct 136981 Score = 40.1 bits (20), Expect = 8.7 Identities = 32/36 (88%) Strand = Plus / Plus Query: 370 ctgagatccaattcctatgctccttgagacgccgaa 405 ||||||||| ||||| ||||||||||| || ||||| Sbjct: 136733 ctgagatcctattccaatgctccttgaaactccgaa 136768
>emb|X84228.1|BVCITSYNH B.vulgaris mRNA for citrate synthase Length = 1551 Score = 127 bits (64), Expect = 5e-26 Identities = 256/320 (80%) Strand = Plus / Minus Query: 299 ttttcgagccactccatggtgacactcttcggtctttcaagcggcagaccaagggcacgg 358 ||||| ||||| ||||| ||||||||||| || || || ||||||| ||||| || ||| Sbjct: 1292 ttttcaagccattccatagtgacactctttggcctctctagcggcaagccaagagctcgg 1233 Query: 359 tcccagatgagctgagatccaattcctatgctccttgagacgccgaacaagacagtgtag 418 ||||| || ||||| || | ||||| | |||||||| || || ||||| || || ||| Sbjct: 1232 tcccatataagctgtgagcatattccaagactccttgataccccaaacaaaaccgtatag 1173 Query: 419 tatcgtgcttcagttaatccgaagtggttaagcaacactccactgtgagcatcgacatta 478 |||| |||||| || || || ||||||| ||||| |||||||| |||||||| |||||| Sbjct: 1172 tatcttgcttctgtcaaaccatagtggttcagcaaaactccactatgagcatcaacatta 1113 Query: 479 ggccatgggttttttaccttgcccaactcggtgaggatcggaggcacaacttcatacaac 538 |||||||| || |||||||| || | ||| || || |||||||| |||||||||||| Sbjct: 1112 ggccatggattctttacctttccaagctctaatagaataggaggcaccacttcatacaac 1053 Query: 539 ttggagaccagttggaaaagtgggtcctccggtaaatacttcaatgcaaactccctttgg 598 || || |||| ||| |||| |||||| || || || | |||||| ||||| || |||||| Sbjct: 1052 tttgacaccaattgaaaaaatgggtcatcaggcaagtgcttcaacgcaaattctctttgg 993 Query: 599 cacgagtatcgtggatctgt 618 || | ||||| ||||||||| Sbjct: 992 catgtgtatcttggatctgt 973
>gb|AF367444.1| Prunus persica clone Cs1 citrate synthase (cs1) mRNA, complete cds; nuclear gene for mitochondrial product Length = 1873 Score = 117 bits (59), Expect = 5e-23 Identities = 230/287 (80%) Strand = Plus / Minus Query: 332 ctttcaagcggcagaccaagggcacggtcccagatgagctgagatccaattcctatgctc 391 |||||||| |||| |||||| || |||||||| || |||||||| ||||| ||||| ||| Sbjct: 1502 ctttcaagaggcaaaccaagagcccggtcccatatcagctgagaaccaatccctatactc 1443 Query: 392 cttgagacgccgaacaagacagtgtagtatcgtgcttcagttaatccgaagtggttaagc 451 ||||| ||||| || | ||||| | ||| ||| || || || || || ||||| | | Sbjct: 1442 cttgatacgccaaagagaacagtaaaaaatcttgcctcggtcaaaccaaaatggttcaac 1383 Query: 452 aacactccactgtgagcatcgacattaggccatgggttttttaccttgcccaactcggtg 511 | ||||||||||||||||| ||||| ||||| |||||||| |||||||| | ||| | Sbjct: 1382 agaactccactgtgagcatctacattgggccaggggtttttaaccttgcctagttcgata 1323 Query: 512 aggatcggaggcacaacttcatacaacttggagaccagttggaaaagtgggtcctccggt 571 || || |||||||| |||||||| | |||||||||||| || || || || || || || Sbjct: 1322 agaatgggaggcacgacttcataaagcttggagaccagctgaaacagcggatcatcaggc 1263 Query: 572 aaatacttcaatgcaaactccctttggcacgagtatcgtggatctgt 618 || | ||| ||||||||||||| ||| || ||||||||||||||||| Sbjct: 1262 aagtgctttaatgcaaactcccgttgacatgagtatcgtggatctgt 1216
>emb|BX819782.1|CNS0A8I6 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS26ZH09 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1714 Score = 109 bits (55), Expect = 1e-20 Identities = 265/335 (79%) Strand = Plus / Minus Query: 305 agccactccatggtgacactcttcggtctttcaagcggcagaccaagggcacggtcccag 364 ||||| |||||||| |||||||| || || ||||| | || ||||| || |||||||| Sbjct: 1477 agccagtccatggtaacactctttggcctctcaagtgcaagtccaagagctcggtcccat 1418 Query: 365 atgagctgagatccaattcctatgctccttgagacgccgaacaagacagtgtagtatcgt 424 ||||||||||| | || || | |||||||| || || || | || |||||||| | | Sbjct: 1417 atgagctgagagcagatgccaagactccttgaaacaccaaagagcacggtgtagtacctt 1358 Query: 425 gcttcagttaatccgaagtggttaagcaacactccactgtgagcatcgacattaggccat 484 ||||| |||| || ||||||| ||||| || |||||||||||||| ||||| ||||| Sbjct: 1357 gcttcggttagaccatagtggttcagcaagaccccactgtgagcatcaacatttggccac 1298 Query: 485 gggttttttaccttgcccaactcggtgaggatcggaggcacaacttcatacaacttggag 544 ||||| || ||||| || | ||| ||||| | ||||||||||||||||| | ||| || Sbjct: 1297 gggttcttcacctttccaagctcagtgagaacaggaggcacaacttcataaagctttgac 1238 Query: 545 accagttggaaaagtgggtcctccggtaaatacttcaatgcaaactccctttggcacgag 604 ||||| |||||||| ||||| || |||| || |||||| ||||| || |||||||| Sbjct: 1237 accagctggaaaagagggtcgtcaggtagatgcttcaaggcaaattctctttggcataca 1178 Query: 605 tatcgtggatctgtattgcgtagaactccatgacc 639 |||| |||||| |||||||| ||||| || ||||| Sbjct: 1177 tatcttggatcagtattgcgcagaacaccgtgacc 1143
>ref|NM_129998.2| Arabidopsis thaliana ATCS; citrate (SI)-synthase AT2G44350 (ATCS) transcript variant AT2G44350.1 mRNA, complete cds Length = 2112 Score = 101 bits (51), Expect = 3e-18 Identities = 162/199 (81%) Strand = Plus / Minus Query: 441 agtggttaagcaacactccactgtgagcatcgacattaggccatgggttttttaccttgc 500 ||||||| ||||| || |||||||||||||| ||||| ||||| ||||| || ||||| | Sbjct: 1384 agtggttcagcaagaccccactgtgagcatcaacatttggccacgggttcttcacctttc 1325 Query: 501 ccaactcggtgaggatcggaggcacaacttcatacaacttggagaccagttggaaaagtg 560 | | ||| ||||| | ||||||||||||||||| | ||| || ||||| |||||||| | Sbjct: 1324 caagctcagtgagaacaggaggcacaacttcataaagctttgacaccagctggaaaagag 1265 Query: 561 ggtcctccggtaaatacttcaatgcaaactccctttggcacgagtatcgtggatctgtat 620 |||| || |||| || |||||| ||||| || |||||||| |||| |||||| |||| Sbjct: 1264 ggtcgtcaggtagatgcttcaaggcaaattctctttggcatacatatcttggatcagtat 1205 Query: 621 tgcgtagaactccatgacc 639 |||| ||||| || ||||| Sbjct: 1204 tgcgcagaacaccgtgacc 1186
>ref|NM_180084.1| Arabidopsis thaliana ATCS; citrate (SI)-synthase AT2G44350 (ATCS) transcript variant AT2G44350.2 mRNA, complete cds Length = 2115 Score = 101 bits (51), Expect = 3e-18 Identities = 162/199 (81%) Strand = Plus / Minus Query: 441 agtggttaagcaacactccactgtgagcatcgacattaggccatgggttttttaccttgc 500 ||||||| ||||| || |||||||||||||| ||||| ||||| ||||| || ||||| | Sbjct: 1387 agtggttcagcaagaccccactgtgagcatcaacatttggccacgggttcttcacctttc 1328 Query: 501 ccaactcggtgaggatcggaggcacaacttcatacaacttggagaccagttggaaaagtg 560 | | ||| ||||| | ||||||||||||||||| | ||| || ||||| |||||||| | Sbjct: 1327 caagctcagtgagaacaggaggcacaacttcataaagctttgacaccagctggaaaagag 1268 Query: 561 ggtcctccggtaaatacttcaatgcaaactccctttggcacgagtatcgtggatctgtat 620 |||| || |||| || |||||| ||||| || |||||||| |||| |||||| |||| Sbjct: 1267 ggtcgtcaggtagatgcttcaaggcaaattctctttggcatacatatcttggatcagtat 1208 Query: 621 tgcgtagaactccatgacc 639 |||| ||||| || ||||| Sbjct: 1207 tgcgcagaacaccgtgacc 1189
>gb|BT006613.1| Arabidopsis thaliana At2g44350 mRNA, complete cds Length = 1422 Score = 101 bits (51), Expect = 3e-18 Identities = 162/199 (81%) Strand = Plus / Minus Query: 441 agtggttaagcaacactccactgtgagcatcgacattaggccatgggttttttaccttgc 500 ||||||| ||||| || |||||||||||||| ||||| ||||| ||||| || ||||| | Sbjct: 1252 agtggttcagcaagaccccactgtgagcatcaacatttggccacgggttcttcacctttc 1193 Query: 501 ccaactcggtgaggatcggaggcacaacttcatacaacttggagaccagttggaaaagtg 560 | | ||| ||||| | ||||||||||||||||| | ||| || ||||| |||||||| | Sbjct: 1192 caagctcagtgagaacaggaggcacaacttcataaagctttgacaccagctggaaaagag 1133 Query: 561 ggtcctccggtaaatacttcaatgcaaactccctttggcacgagtatcgtggatctgtat 620 |||| || |||| || |||||| ||||| || |||||||| |||| |||||| |||| Sbjct: 1132 ggtcgtcaggtagatgcttcaaggcaaattctctttggcatacatatcttggatcagtat 1073 Query: 621 tgcgtagaactccatgacc 639 |||| ||||| || ||||| Sbjct: 1072 tgcgcagaacaccgtgacc 1054
>gb|AF387018.1|AF387018 Arabidopsis thaliana citrate synthase (At2g44350; F4I1.16) mRNA, complete cds Length = 1757 Score = 101 bits (51), Expect = 3e-18 Identities = 162/199 (81%) Strand = Plus / Minus Query: 441 agtggttaagcaacactccactgtgagcatcgacattaggccatgggttttttaccttgc 500 ||||||| ||||| || |||||||||||||| ||||| ||||| ||||| || ||||| | Sbjct: 1386 agtggttcagcaagaccccactgtgagcatcaacatttggccacgggttcttcacctttc 1327 Query: 501 ccaactcggtgaggatcggaggcacaacttcatacaacttggagaccagttggaaaagtg 560 | | ||| ||||| | ||||||||||||||||| | ||| || ||||| |||||||| | Sbjct: 1326 caagctcagtgagaacaggaggcacaacttcataaagctttgacaccagctggaaaagag 1267 Query: 561 ggtcctccggtaaatacttcaatgcaaactccctttggcacgagtatcgtggatctgtat 620 |||| || |||| || |||||| ||||| || |||||||| |||| |||||| |||| Sbjct: 1266 ggtcgtcaggtagatgcttcaaggcaaattctctttggcatacatatcttggatcagtat 1207 Query: 621 tgcgtagaactccatgacc 639 |||| ||||| || ||||| Sbjct: 1206 tgcgcagaacaccgtgacc 1188
>emb|BX819934.1|CNS0A8H8 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS50ZE12 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1675 Score = 101 bits (51), Expect = 3e-18 Identities = 162/199 (81%) Strand = Plus / Minus Query: 441 agtggttaagcaacactccactgtgagcatcgacattaggccatgggttttttaccttgc 500 ||||||| ||||| || |||||||||||||| ||||| ||||| ||||| || ||||| | Sbjct: 1342 agtggttcagcaagaccccactgtgagcatcaacatttggccacgggttcttcacctttc 1283 Query: 501 ccaactcggtgaggatcggaggcacaacttcatacaacttggagaccagttggaaaagtg 560 | | ||| ||||| | ||||||||||||||||| | ||| || ||||| |||||||| | Sbjct: 1282 caagctcagtgagaacaggaggcacaacttcataaagctttgacaccagctggaaaagag 1223 Query: 561 ggtcctccggtaaatacttcaatgcaaactccctttggcacgagtatcgtggatctgtat 620 |||| || |||| || |||||| ||||| || |||||||| |||| |||||| |||| Sbjct: 1222 ggtcgtcaggtagatgcttcaaggcaaattctctttggcatacatatcttggatcagtat 1163 Query: 621 tgcgtagaactccatgacc 639 |||| ||||| || ||||| Sbjct: 1162 tgcgcagaacaccgtgacc 1144
>emb|BX819832.1|CNS0A7W8 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS34ZA05 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1675 Score = 101 bits (51), Expect = 3e-18 Identities = 162/199 (81%) Strand = Plus / Minus Query: 441 agtggttaagcaacactccactgtgagcatcgacattaggccatgggttttttaccttgc 500 ||||||| ||||| || |||||||||||||| ||||| ||||| ||||| || ||||| | Sbjct: 1340 agtggttcagcaagaccccactgtgagcatcaacatttggccacgggttcttcacctttc 1281 Query: 501 ccaactcggtgaggatcggaggcacaacttcatacaacttggagaccagttggaaaagtg 560 | | ||| ||||| | ||||||||||||||||| | ||| || ||||| |||||||| | Sbjct: 1280 caagctcagtgagaacaggaggcacaacttcataaagctttgacaccagctggaaaagag 1221 Query: 561 ggtcctccggtaaatacttcaatgcaaactccctttggcacgagtatcgtggatctgtat 620 |||| || |||| || |||||| ||||| || |||||||| |||| |||||| |||| Sbjct: 1220 ggtcgtcaggtagatgcttcaaggcaaattctctttggcatacatatcttggatcagtat 1161 Query: 621 tgcgtagaactccatgacc 639 |||| ||||| || ||||| Sbjct: 1160 tgcgcagaacaccgtgacc 1142
>gb|AY085647.1| Arabidopsis thaliana clone 16528 mRNA, complete sequence Length = 1764 Score = 101 bits (51), Expect = 3e-18 Identities = 162/199 (81%) Strand = Plus / Minus Query: 441 agtggttaagcaacactccactgtgagcatcgacattaggccatgggttttttaccttgc 500 ||||||| ||||| || |||||||||||||| ||||| ||||| ||||| || ||||| | Sbjct: 1363 agtggttcagcaagaccccactgtgagcatcaacatttggccacgggttcttcacctttc 1304 Query: 501 ccaactcggtgaggatcggaggcacaacttcatacaacttggagaccagttggaaaagtg 560 | | ||| ||||| | ||||||||||||||||| | ||| || ||||| |||||||| | Sbjct: 1303 caagctcagtgagaacaggaggcacaacttcataaagctttgacaccagctggaaaagag 1244 Query: 561 ggtcctccggtaaatacttcaatgcaaactccctttggcacgagtatcgtggatctgtat 620 |||| || |||| || |||||| ||||| || |||||||| |||| |||||| |||| Sbjct: 1243 ggtcgtcaggtagatgcttcaaggcaaattctctttggcatacatatcttggatcagtat 1184 Query: 621 tgcgtagaactccatgacc 639 |||| ||||| || ||||| Sbjct: 1183 tgcgcagaacaccgtgacc 1165
>emb|X75082.1|STCITS S.tuberosum mRNA for mitochondrial citrate-synthase Length = 1891 Score = 65.9 bits (33), Expect = 2e-07 Identities = 75/89 (84%) Strand = Plus / Minus Query: 287 ttcttgcagtggttttcgagccactccatggtgacactcttcggtctttcaagcggcaga 346 |||||||| ||||| || ||||||||||| ||||||||||| || || || ||||||| Sbjct: 1481 ttcttgcactggttctcaagccactccattgtgacactctttggcctctctagcggcaat 1422 Query: 347 ccaagggcacggtcccagatgagctgaga 375 ||||| || |||||||| || |||||||| Sbjct: 1421 ccaagagctcggtcccaaattagctgaga 1393
>gb|U19481.1|CMU19481 Citrus maxima citrate synthase (cit) mRNA, nuclear gene encoding mitochondrial protein, complete cds Length = 1733 Score = 63.9 bits (32), Expect = 6e-07 Identities = 122/152 (80%) Strand = Plus / Minus Query: 443 tggttaagcaacactccactgtgagcatcgacattaggccatgggttttttaccttgccc 502 ||||| |||| ||| |||||||||||||| ||||| ||||| |||||||| |||||||| Sbjct: 1306 tggttcagcagcaccccactgtgagcatcaacatttggccaggggtttttaaccttgcct 1247 Query: 503 aactcggtgaggatcggaggcacaacttcatacaacttggagaccagttggaaaagtggg 562 | | || | || || ||||| |||||||||| ||| || ||||| ||||| | ||| Sbjct: 1246 agttttgttaatattgggggcaccacttcatacagcttagaaaccagctggaacaatgga 1187 Query: 563 tcctccggtaaatacttcaatgcaaactccct 594 || || || |||| |||||| ||||||||||| Sbjct: 1186 tcatcaggcaaatgcttcaaggcaaactccct 1155
>gb|AY428532.1| Citrus junos mitochondrial citrate synthase precursor mRNA, complete cds; nuclear gene for mitochondrial product Length = 1733 Score = 61.9 bits (31), Expect = 2e-06 Identities = 52/59 (88%) Strand = Plus / Minus Query: 443 tggttaagcaacactccactgtgagcatcgacattaggccatgggttttttaccttgcc 501 ||||| |||| ||| |||||||||||||| ||||| ||||| |||||||| |||||||| Sbjct: 1281 tggttcagcagcaccccactgtgagcatcaacatttggccaggggtttttaaccttgcc 1223
>emb|X84226.1|NTCITSYNH N.tabacum mRNA for citrate synthase Length = 1747 Score = 58.0 bits (29), Expect = 4e-05 Identities = 74/89 (83%) Strand = Plus / Minus Query: 287 ttcttgcagtggttttcgagccactccatggtgacactcttcggtctttcaagcggcaga 346 |||||||| ||||| || ||||||||||| ||||||||||| || || || || |||| Sbjct: 1472 ttcttgcaatggttctcaagccactccattgtgacactctttggcctctctagtggcaat 1413 Query: 347 ccaagggcacggtcccagatgagctgaga 375 ||||| || |||||||| || |||||||| Sbjct: 1412 ccaagagctcggtcccaaattagctgaga 1384 Score = 48.1 bits (24), Expect = 0.036 Identities = 75/92 (81%) Strand = Plus / Minus Query: 545 accagttggaaaagtgggtcctccggtaaatacttcaatgcaaactccctttggcacgag 604 |||||||| || ||||| || || || |||| |||||| || ||||| || ||||| | | Sbjct: 1217 accagttgaaacagtggatcttcaggcaaatgcttcaaagcgaactctctctggcatgtg 1158 Query: 605 tatcgtggatctgtattgcgtagaactccatg 636 |||| |||||| || ||||| ||||||||||| Sbjct: 1157 tatcttggatcagtcttgcgcagaactccatg 1126
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 58.0 bits (29), Expect = 4e-05 Identities = 50/57 (87%) Strand = Plus / Plus Query: 491 tttaccttgcccaactcggtgaggatcggaggcacaacttcatacaacttggagacc 547 ||||||||||| | ||| |||||| ||||||||||||||||||||||| |||||| Sbjct: 12639764 tttaccttgcctatctcatggaggattggaggcacaacttcatacaactttgagacc 12639820 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 603 agtatcgtggatctgtattg 622 |||||||||||||||||||| Sbjct: 3591222 agtatcgtggatctgtattg 3591241
>emb|AL731633.2|OSJN00280 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0096E05, complete sequence Length = 129908 Score = 58.0 bits (29), Expect = 4e-05 Identities = 50/57 (87%) Strand = Plus / Plus Query: 491 tttaccttgcccaactcggtgaggatcggaggcacaacttcatacaacttggagacc 547 ||||||||||| | ||| |||||| ||||||||||||||||||||||| |||||| Sbjct: 54750 tttaccttgcctatctcatggaggattggaggcacaacttcatacaactttgagacc 54806
>gb|AC146766.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone B1112E06, complete sequence Length = 177488 Score = 54.0 bits (27), Expect = 6e-04 Identities = 27/27 (100%) Strand = Plus / Plus Query: 515 atcggaggcacaacttcatacaacttg 541 ||||||||||||||||||||||||||| Sbjct: 112195 atcggaggcacaacttcatacaacttg 112221 Score = 44.1 bits (22), Expect = 0.56 Identities = 43/50 (86%) Strand = Plus / Plus Query: 545 accagttggaaaagtgggtcctccggtaaatacttcaatgcaaactccct 594 ||||||||||||||||| ||||| || || || |||| || ||||||||| Sbjct: 112304 accagttggaaaagtggatcctcaggcaagtaattcagtgtaaactccct 112353 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 455 actccactgtgagcatcgacatta 478 ||||||||||||||||| |||||| Sbjct: 112041 actccactgtgagcatcaacatta 112064
>gb|BC046571.1| Xenopus laevis citrate synthase, mRNA (cDNA clone MGC:53454 IMAGE:5572019), complete cds Length = 3221 Score = 54.0 bits (27), Expect = 6e-04 Identities = 33/35 (94%) Strand = Plus / Minus Query: 455 actccactgtgagcatcgacattaggccatgggtt 489 ||||||||||||||||| ||||||||||| ||||| Sbjct: 1342 actccactgtgagcatccacattaggccaggggtt 1308
>gb|AC004521.3| Arabidopsis thaliana chromosome 2 clone F4I1 map m336, complete sequence Length = 118327 Score = 50.1 bits (25), Expect = 0.009 Identities = 43/49 (87%) Strand = Plus / Minus Query: 441 agtggttaagcaacactccactgtgagcatcgacattaggccatgggtt 489 ||||||| ||||| || |||||||||||||| ||||| ||||| ||||| Sbjct: 45585 agtggttcagcaagaccccactgtgagcatcaacatttggccacgggtt 45537
>dbj|AP007150.1| Aspergillus oryzae RIB40 genomic DNA, SC009 Length = 1913118 Score = 48.1 bits (24), Expect = 0.036 Identities = 30/32 (93%) Strand = Plus / Minus Query: 341 ggcagaccaagggcacggtcccagatgagctg 372 ||||| || ||||||||||||||||||||||| Sbjct: 1496164 ggcaggccgagggcacggtcccagatgagctg 1496133
>ref|XM_566478.1| Cryptococcus neoformans var. neoformans JEC21 citrate synthase (CNA00510) partial mRNA Length = 1611 Score = 46.1 bits (23), Expect = 0.14 Identities = 32/35 (91%) Strand = Plus / Minus Query: 341 ggcagaccaagggcacggtcccagatgagctgaga 375 |||| |||||| || |||||||||||||||||||| Sbjct: 1375 ggcataccaagagctcggtcccagatgagctgaga 1341
>emb|X17528.1|ATMTCITRN Arabidopsis thaliana mRNA for mitochondrial citrate synthetase Length = 1680 Score = 46.1 bits (23), Expect = 0.14 Identities = 38/43 (88%) Strand = Plus / Minus Query: 441 agtggttaagcaacactccactgtgagcatcgacattaggcca 483 ||||||| ||||| || |||||||||||||| ||||| ||||| Sbjct: 1306 agtggttcagcaagaccccactgtgagcatcaacatttggcca 1264
>gb|AE017341.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 1, complete sequence Length = 2300533 Score = 44.1 bits (22), Expect = 0.56 Identities = 28/30 (93%) Strand = Plus / Minus Query: 346 accaagggcacggtcccagatgagctgaga 375 |||||| || |||||||||||||||||||| Sbjct: 145402 accaagagctcggtcccagatgagctgaga 145373
>ref|XM_531634.2| PREDICTED: Canis familiaris similar to citrate synthase (LOC474403), mRNA Length = 1822 Score = 44.1 bits (22), Expect = 0.56 Identities = 46/54 (85%) Strand = Plus / Minus Query: 449 agcaacactccactgtgagcatcgacattaggccatgggttttttaccttgccc 502 |||| ||| |||||||||||||| ||||| ||||| ||||| || |||||||| Sbjct: 1383 agcagcacgccactgtgagcatctacattgggccaagggttcttggccttgccc 1330
>gb|AY144810.1| Saccharomyces bayanus clone Contig3962 CIT1 gene, complete cds Length = 1440 Score = 44.1 bits (22), Expect = 0.56 Identities = 25/26 (96%) Strand = Plus / Minus Query: 464 tgagcatcgacattaggccatgggtt 489 |||| ||||||||||||||||||||| Sbjct: 1244 tgagaatcgacattaggccatgggtt 1219
>ref|XM_235086.3| PREDICTED: Rattus norvegicus similar to citrate synthase (LOC299750), mRNA Length = 2834 Score = 44.1 bits (22), Expect = 0.56 Identities = 37/42 (88%) Strand = Plus / Minus Query: 448 aagcaacactccactgtgagcatcgacattaggccatgggtt 489 ||||| |||||||||||||||||| || || ||||| ||||| Sbjct: 1308 aagcagcactccactgtgagcatctacgttgggccaggggtt 1267
>dbj|AB017159.1| Daucus carota mRNA for citrate synthase, complete cds Length = 1859 Score = 44.1 bits (22), Expect = 0.56 Identities = 34/38 (89%) Strand = Plus / Minus Query: 287 ttcttgcagtggttttcgagccactccatggtgacact 324 ||||||||||||||||| ||||| ||||| || ||||| Sbjct: 1565 ttcttgcagtggttttcaagccattccattgtaacact 1528 Score = 40.1 bits (20), Expect = 8.7 Identities = 38/44 (86%) Strand = Plus / Minus Query: 458 ccactgtgagcatcgacattaggccatgggttttttaccttgcc 501 ||||| || ||||| ||||| ||||| ||||| ||||||||||| Sbjct: 1394 ccactatgggcatcaacatttggccaggggttctttaccttgcc 1351
>gb|AC108433.9| Mus musculus chromosome 18, clone RP23-194M19, complete sequence Length = 188997 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 48 gcctagcaacacatcaaggcc 68 ||||||||||||||||||||| Sbjct: 47283 gcctagcaacacatcaaggcc 47303
>gb|BC080507.1| Xenopus tropicalis cDNA clone IMAGE:7027133 Length = 3218 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Minus Query: 458 ccactgtgagcatcgacattaggccatgg 486 ||||| |||||||| |||||||||||||| Sbjct: 1331 ccactatgagcatccacattaggccatgg 1303
>ref|XM_790049.1| PREDICTED: Strongylocentrotus purpuratus similar to citrate synthase (LOC590444), mRNA Length = 2793 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Minus Query: 461 ctgtgagcatcgacattaggccatgggtt 489 ||||||||||| ||||| ||||||||||| Sbjct: 1154 ctgtgagcatccacattgggccatgggtt 1126
>ref|NM_001017313.2| Xenopus tropicalis citrate synthase (cs), mRNA Length = 3200 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Minus Query: 458 ccactgtgagcatcgacattaggccatgg 486 ||||| |||||||| |||||||||||||| Sbjct: 1298 ccactatgagcatccacattaggccatgg 1270
>emb|CR855469.2| Xenopus tropicalis finished cDNA, clone TNeu053d23 Length = 3200 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Minus Query: 458 ccactgtgagcatcgacattaggccatgg 486 ||||| |||||||| |||||||||||||| Sbjct: 1298 ccactatgagcatccacattaggccatgg 1270
>gb|AC013255.5| Drosophila melanogaster clone BACR27A22, complete sequence Length = 148414 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 361 ccagatgagctgagatccaa 380 |||||||||||||||||||| Sbjct: 39003 ccagatgagctgagatccaa 38984
>gb|AC009843.9| Drosophila melanogaster clone BACR01G11, complete sequence Length = 192819 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 361 ccagatgagctgagatccaa 380 |||||||||||||||||||| Sbjct: 11131 ccagatgagctgagatccaa 11150
>ref|XM_366541.1| Magnaporthe grisea 70-15 chromosome VII hypothetical protein (MG02617.4) partial mRNA Length = 1377 Score = 40.1 bits (20), Expect = 8.7 Identities = 29/32 (90%) Strand = Plus / Minus Query: 341 ggcagaccaagggcacggtcccagatgagctg 372 |||||||| || || ||||||||||||||||| Sbjct: 1313 ggcagacccagcgcccggtcccagatgagctg 1282
>gb|AY816050.1| Schistosoma japonicum SJCHGC00653 protein mRNA, complete cds Length = 1785 Score = 40.1 bits (20), Expect = 8.7 Identities = 38/44 (86%) Strand = Plus / Minus Query: 448 aagcaacactccactgtgagcatcgacattaggccatgggtttt 491 |||||| || |||||||| ||||| || ||||||||||| |||| Sbjct: 1256 aagcaaaacaccactgtgtgcatctacgttaggccatggatttt 1213
>gb|AC109131.8| Homo sapiens 3 BAC RP11-296J4 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 118621 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 84 atttttcatgccaagtttga 103 |||||||||||||||||||| Sbjct: 3384 atttttcatgccaagtttga 3403
>gb|AY223083.1| Schistosoma japonicum clone ZZD1315 mRNA sequence Length = 2013 Score = 40.1 bits (20), Expect = 8.7 Identities = 38/44 (86%) Strand = Plus / Minus Query: 448 aagcaacactccactgtgagcatcgacattaggccatgggtttt 491 |||||| || |||||||| ||||| || ||||||||||| |||| Sbjct: 1278 aagcaaaacaccactgtgtgcatctacgttaggccatggatttt 1235
>gb|AY126274.1| Candida krusei citrate synthase (CS1) gene, complete cds Length = 1371 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 470 tcgacattaggccatgggtt 489 |||||||||||||||||||| Sbjct: 1172 tcgacattaggccatgggtt 1153
>emb|CR548612.1| Paramecium tetraurelia macronuclear largest chromosome, complete sequence Length = 984602 Score = 40.1 bits (20), Expect = 8.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 464 tgagcatcgacattaggccatgggtttt 491 |||||||| |||||||||||||| |||| Sbjct: 550648 tgagcatcaacattaggccatggatttt 550621
>emb|AL606655.3|OSJN00103 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0040D15, complete sequence Length = 130618 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 603 agtatcgtggatctgtattg 622 |||||||||||||||||||| Sbjct: 57506 agtatcgtggatctgtattg 57525
>gb|AC105245.4| Homo sapiens chromosome 18, clone CTD-2515C13, complete sequence Length = 200721 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 100 ttgacagattgactgacttg 119 |||||||||||||||||||| Sbjct: 92185 ttgacagattgactgacttg 92204
>gb|AY909482.1| Siniperca chuatsi clone C226 archease mRNA, partial cds Length = 521 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 605 tatcgtggatctgtattgcg 624 |||||||||||||||||||| Sbjct: 323 tatcgtggatctgtattgcg 304
>dbj|AP005614.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0090H18 Length = 174842 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 92 tgccaagtttgacagattgactga 115 ||||||||||||||||||| |||| Sbjct: 84705 tgccaagtttgacagattggctga 84728
>gb|BC091367.1| Rattus norvegicus cDNA clone IMAGE:7319211 Length = 1863 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 406 caagacagtgtagtatcgtg 425 |||||||||||||||||||| Sbjct: 256 caagacagtgtagtatcgtg 275
>gb|AE002665.5| Drosophila melanogaster chromosome 3L, section 83 of 83 of the complete sequence Length = 491220 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 361 ccagatgagctgagatccaa 380 |||||||||||||||||||| Sbjct: 409957 ccagatgagctgagatccaa 409938
>dbj|AP002089.2| Homo sapiens genomic DNA, chromosome 8q23, clone:KB1100B9 Length = 151959 Score = 40.1 bits (20), Expect = 8.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 25 gcaacattaagtacaaaaacgttgccta 52 ||||||||||||||||||| ||| |||| Sbjct: 108771 gcaacattaagtacaaaaatgttcccta 108744
>dbj|AP005622.3| Homo sapiens genomic DNA, chromosome 8q23, clone: KB1016F12, complete sequence Length = 200738 Score = 40.1 bits (20), Expect = 8.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 25 gcaacattaagtacaaaaacgttgccta 52 ||||||||||||||||||| ||| |||| Sbjct: 183400 gcaacattaagtacaaaaatgttcccta 183373
>dbj|AP003786.2| Homo sapiens genomic DNA, chromosome 8q23, clone:KB1018C4, complete sequence Length = 174667 Score = 40.1 bits (20), Expect = 8.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 25 gcaacattaagtacaaaaacgttgccta 52 ||||||||||||||||||| ||| |||| Sbjct: 38928 gcaacattaagtacaaaaatgttcccta 38901 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,594,970 Number of Sequences: 3902068 Number of extensions: 4594970 Number of successful extensions: 71769 Number of sequences better than 10.0: 62 Number of HSP's better than 10.0 without gapping: 65 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 71427 Number of HSP's gapped (non-prelim): 338 length of query: 639 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 616 effective length of database: 17,143,297,704 effective search space: 10560271385664 effective search space used: 10560271385664 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)