ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbags25k22 |
|---|---|
| Clone Library Name | barley_pub |
>LEP1_SYNY3 (P72660) Probable signal peptidase I-1 (EC 3.4.21.89) (SPase I-1)| (Leader peptidase I-1) Length = 196 Score = 63.5 bits (153), Expect = 2e-10 Identities = 29/52 (55%), Positives = 35/52 (67%) Frame = -3 Query: 428 ENAVFVMGDNRNNSYDSHVWGPLPAKNILGRSIFRYXPPGRIGSTTRDCFGP 273 + VFVMGDNRNNS DSHVWG LP +NI+G ++FR+ P R G F P Sbjct: 138 DGQVFVMGDNRNNSNDSHVWGFLPQQNIIGHALFRFFPASRWGQLGSFTFVP 189
>LEP_PHOLA (Q51876) Signal peptidase I (EC 3.4.21.89) (SPase I) (Leader| peptidase I) Length = 203 Score = 59.3 bits (142), Expect = 4e-09 Identities = 23/42 (54%), Positives = 33/42 (78%) Frame = -3 Query: 425 NAVFVMGDNRNNSYDSHVWGPLPAKNILGRSIFRYXPPGRIG 300 ++ V+GDNRNNSYDSH WG +P +NI+GR++ R+ P R+G Sbjct: 154 DSFLVLGDNRNNSYDSHFWGYVPRQNIIGRAVVRFWPVNRLG 195
>LEP2_SYNY3 (P73157) Probable signal peptidase I-2 (EC 3.4.21.89) (SPase I-2)| (Leader peptidase I-2) Length = 218 Score = 57.4 bits (137), Expect = 1e-08 Identities = 24/48 (50%), Positives = 33/48 (68%) Frame = -3 Query: 428 ENAVFVMGDNRNNSYDSHVWGPLPAKNILGRSIFRYXPPGRIGSTTRD 285 ++ V+GDNRNNSYDSH WG +P + +LGR+ R+ P R+G T D Sbjct: 144 DDQYLVLGDNRNNSYDSHYWGFVPREKLLGRAFVRFWPVPRVGLLTDD 191
>LEP_AQUAE (O67088) Signal peptidase I (EC 3.4.21.89) (SPase I) (Leader| peptidase I) Length = 256 Score = 45.4 bits (106), Expect = 6e-05 Identities = 25/60 (41%), Positives = 34/60 (56%) Frame = -3 Query: 428 ENAVFVMGDNRNNSYDSHVWGPLPAKNILGRSIFRYXPPGRIGSTTRDCFGPETKPDSLI 249 E FVMGDNR+NS DS WG +P +NI G++ Y G++ S T + P T +I Sbjct: 180 EGYYFVMGDNRDNSQDSRFWGFVPRENIEGKAFVIYY-SGKVPSLTPEEANPLTAVRQII 238
>LEP_BUCBP (Q89AM6) Signal peptidase I (EC 3.4.21.89) (SPase I) (Leader| peptidase I) Length = 310 Score = 44.7 bits (104), Expect = 1e-04 Identities = 17/30 (56%), Positives = 24/30 (80%) Frame = -3 Query: 416 FVMGDNRNNSYDSHVWGPLPAKNILGRSIF 327 FV+GDNR+NS DS WG +P KN++G+ +F Sbjct: 256 FVLGDNRDNSLDSRYWGFVPEKNLIGKVVF 285
>LEP_BUCAI (P57347) Signal peptidase I (EC 3.4.21.89) (SPase I) (Leader| peptidase I) Length = 314 Score = 43.5 bits (101), Expect = 2e-04 Identities = 17/29 (58%), Positives = 24/29 (82%) Frame = -3 Query: 416 FVMGDNRNNSYDSHVWGPLPAKNILGRSI 330 F+MGDNR+NS DS WG +P KN++G++I Sbjct: 260 FMMGDNRDNSLDSRYWGFVPEKNLVGKAI 288
>LEP_BUCAP (Q8K9R0) Signal peptidase I (EC 3.4.21.89) (SPase I) (Leader| peptidase I) Length = 312 Score = 43.5 bits (101), Expect = 2e-04 Identities = 17/32 (53%), Positives = 25/32 (78%) Frame = -3 Query: 428 ENAVFVMGDNRNNSYDSHVWGPLPAKNILGRS 333 +N F+MGDNR+NS DS WG +P +N+LG++ Sbjct: 254 KNKYFMMGDNRDNSLDSRYWGFVPEENLLGKA 285
>LEP_HAEIN (P44454) Signal peptidase I (EC 3.4.21.89) (SPase I) (Leader| peptidase I) Length = 349 Score = 41.2 bits (95), Expect = 0.001 Identities = 17/34 (50%), Positives = 25/34 (73%) Frame = -3 Query: 428 ENAVFVMGDNRNNSYDSHVWGPLPAKNILGRSIF 327 E FVMGD+R++S DS WG +P KNI+G++ + Sbjct: 290 EGQYFVMGDHRDHSDDSRFWGFVPEKNIVGKATY 323
>LEP_SALTY (P0A1W2) Signal peptidase I (EC 3.4.21.89) (SPase I) (Leader| peptidase I) Length = 324 Score = 40.4 bits (93), Expect = 0.002 Identities = 15/29 (51%), Positives = 23/29 (79%) Frame = -3 Query: 416 FVMGDNRNNSYDSHVWGPLPAKNILGRSI 330 F+MGDNR+NS DS WG +P N++G+++ Sbjct: 270 FMMGDNRDNSADSRYWGFVPEANLVGKAV 298
>LEP_SALTI (P0A1W3) Signal peptidase I (EC 3.4.21.89) (SPase I) (Leader| peptidase I) Length = 324 Score = 40.4 bits (93), Expect = 0.002 Identities = 15/29 (51%), Positives = 23/29 (79%) Frame = -3 Query: 416 FVMGDNRNNSYDSHVWGPLPAKNILGRSI 330 F+MGDNR+NS DS WG +P N++G+++ Sbjct: 270 FMMGDNRDNSADSRYWGFVPEANLVGKAV 298
>LEP_ECOLI (P00803) Signal peptidase I (EC 3.4.21.89) (SPase I) (Leader| peptidase I) Length = 324 Score = 40.4 bits (93), Expect = 0.002 Identities = 16/28 (57%), Positives = 22/28 (78%) Frame = -3 Query: 416 FVMGDNRNNSYDSHVWGPLPAKNILGRS 333 F+MGDNR+NS DS WG +P N++GR+ Sbjct: 270 FMMGDNRDNSADSRYWGFVPEANLVGRA 297
>LEP_HELPY (O25300) Signal peptidase I (EC 3.4.21.89) (SPase I) (Leader| peptidase I) Length = 290 Score = 39.7 bits (91), Expect = 0.003 Identities = 17/36 (47%), Positives = 24/36 (66%) Frame = -3 Query: 428 ENAVFVMGDNRNNSYDSHVWGPLPAKNILGRSIFRY 321 ++ F++GDNR+NS DS WG + KNI+G F Y Sbjct: 209 DDEFFMIGDNRDNSSDSRFWGSVAYKNIVGSPWFVY 244
>LEP_HELPJ (Q9ZLQ5) Signal peptidase I (EC 3.4.21.89) (SPase I) (Leader| peptidase I) Length = 290 Score = 39.3 bits (90), Expect = 0.004 Identities = 17/32 (53%), Positives = 22/32 (68%) Frame = -3 Query: 416 FVMGDNRNNSYDSHVWGPLPAKNILGRSIFRY 321 F++GDNR+NS DS WG + KNI+G F Y Sbjct: 213 FMIGDNRDNSSDSRFWGSVAYKNIVGSPWFVY 244
>IMP2_YEAST (P46972) Mitochondrial inner membrane protease subunit 2 (EC| 3.4.99.-) Length = 177 Score = 38.5 bits (88), Expect = 0.007 Identities = 20/51 (39%), Positives = 31/51 (60%), Gaps = 5/51 (9%) Frame = -3 Query: 419 VFVMGDNRNNSYDSHVWGPLPAKNILGRSIFRYXPPGRIG-----STTRDC 282 ++V GDN +S DS+ +GP+ + ++G++I PP R G ST RDC Sbjct: 119 IWVEGDNYFHSIDSNTFGPISSGLVIGKAITIVWPPSRWGTDLKLSTGRDC 169
>LEP_BACCL (P41027) Signal peptidase I (EC 3.4.21.89) (SPase I) (Leader| peptidase I) Length = 182 Score = 36.2 bits (82), Expect = 0.034 Identities = 16/35 (45%), Positives = 24/35 (68%) Frame = -3 Query: 419 VFVMGDNRNNSYDSHVWGPLPAKNILGRSIFRYXP 315 +FV+GDNR +S+DS +G + I+G+ FRY P Sbjct: 140 IFVLGDNRLSSWDSRHFGFVKINQIVGKVDFRYWP 174
>LEPV_BACSU (O07560) Signal peptidase I V (EC 3.4.21.89) (SPase I) (Leader| peptidase I) Length = 168 Score = 34.7 bits (78), Expect = 0.098 Identities = 15/26 (57%), Positives = 20/26 (76%) Frame = -3 Query: 416 FVMGDNRNNSYDSHVWGPLPAKNILG 339 FV+GDNR S+DS +GP+ KNI+G Sbjct: 137 FVVGDNRIYSFDSRHFGPIREKNIVG 162
>PPCK_COREF (Q8FM16) Phosphoenolpyruvate carboxykinase [GTP] (EC 4.1.1.32) (PEP| carboxykinase) (Phosphoenolpyruvate carboxylase) (PEPCK) Length = 612 Score = 33.5 bits (75), Expect = 0.22 Identities = 17/65 (26%), Positives = 30/65 (46%) Frame = -3 Query: 428 ENAVFVMGDNRNNSYDSHVWGPLPAKNILGRSIFRYXPPGRIGSTTRDCFGPETKPDSLI 249 E+ F+ +N+ ++ ++ W P A ++R GR C GP T P+ + Sbjct: 84 ESRTFICSENQEDAGPTNNWAPPQAMKEEMTEVYRGSMKGRTMYVVPFCMGPITDPEPKL 143 Query: 248 DVKLT 234 V+LT Sbjct: 144 GVQLT 148
>LEP_STRR6 (P59662) Signal peptidase I (EC 3.4.21.89) (SPase I) (Leader| peptidase I) Length = 204 Score = 33.5 bits (75), Expect = 0.22 Identities = 18/44 (40%), Positives = 25/44 (56%) Frame = -3 Query: 428 ENAVFVMGDNRNNSYDSHVWGPLPAKNILGRSIFRYXPPGRIGS 297 E ++GD+R S DS G AK+I G + FR+ P RIG+ Sbjct: 160 EGEYLLLGDDRLVSSDSRHVGTFKAKDITGEAKFRFWPITRIGT 203
>LEP_PSEAE (Q9I5G7) Signal peptidase I (EC 3.4.21.89) (SPase I) (Leader| peptidase I) Length = 284 Score = 33.5 bits (75), Expect = 0.22 Identities = 16/38 (42%), Positives = 23/38 (60%), Gaps = 10/38 (26%) Frame = -3 Query: 416 FVMGDNRNNSYDSHVW----------GPLPAKNILGRS 333 F+MGDNR+NS DS W G +P +NI+G++ Sbjct: 222 FMMGDNRDNSNDSRYWNDPKIPKDLLGMVPDRNIVGKA 259
>LEPS_BACSU (P28628) Signal peptidase I S (EC 3.4.21.89) (SPase I) (Leader| peptidase I) Length = 184 Score = 33.1 bits (74), Expect = 0.29 Identities = 19/39 (48%), Positives = 22/39 (56%), Gaps = 1/39 (2%) Frame = -3 Query: 428 ENAVFVMGDNRNNSYDS-HVWGPLPAKNILGRSIFRYXP 315 +N FVMGDNR NS DS + G K I G S F + P Sbjct: 138 DNKYFVMGDNRRNSMDSRNGLGLFTKKQIAGTSKFVFYP 176
>LEP_PSEFL (P26844) Signal peptidase I (EC 3.4.21.89) (SPase I) (Leader| peptidase I) Length = 284 Score = 33.1 bits (74), Expect = 0.29 Identities = 16/38 (42%), Positives = 23/38 (60%), Gaps = 10/38 (26%) Frame = -3 Query: 416 FVMGDNRNNSYDSHVW----------GPLPAKNILGRS 333 F+MGDNR+NS DS W G +P +NI+G++ Sbjct: 222 FMMGDNRDNSNDSRYWDDPNIPKDLLGMVPDENIVGKA 259
>LEP_MYCTU (Q10789) Probable signal peptidase I (EC 3.4.21.89) (SPase I)| (Leader peptidase I) Length = 294 Score = 32.7 bits (73), Expect = 0.37 Identities = 19/51 (37%), Positives = 25/51 (49%), Gaps = 11/51 (21%) Frame = -3 Query: 419 VFVMGDNRNNSYDSHVWGPL-----------PAKNILGRSIFRYXPPGRIG 300 V+VMGDNR +S DS PL P N++G++ PP R G Sbjct: 233 VWVMGDNRTHSADSRAHCPLLCTDDPLPGTVPVANVIGKARLIVWPPSRWG 283
>LEP1_BACAM (P41026) Signal peptidase I (EC 3.4.21.89) (SPase I) (Leader| peptidase I) Length = 185 Score = 32.3 bits (72), Expect = 0.49 Identities = 20/46 (43%), Positives = 24/46 (52%), Gaps = 1/46 (2%) Frame = -3 Query: 428 ENAVFVMGDNRNNSYDS-HVWGPLPAKNILGRSIFRYXPPGRIGST 294 ++ FVMGDNR NS DS + G K I G S F + P I T Sbjct: 139 DDKYFVMGDNRRNSMDSRNGLGLFTKKQIAGTSKFVFFPFNEIRKT 184
>LEP_STRPN (O07344) Signal peptidase I (EC 3.4.21.89) (SPase I) (Leader| peptidase I) Length = 204 Score = 32.0 bits (71), Expect = 0.64 Identities = 18/44 (40%), Positives = 24/44 (54%) Frame = -3 Query: 428 ENAVFVMGDNRNNSYDSHVWGPLPAKNILGRSIFRYXPPGRIGS 297 E ++GD+R S DS G AK+I G + FR P RIG+ Sbjct: 160 EGEYLLLGDDRLVSSDSRHVGTFKAKDITGEAKFRLWPITRIGT 203
>LEPH_STAAW (P0A065) Inactive signal peptidase IA| Length = 174 Score = 32.0 bits (71), Expect = 0.64 Identities = 14/37 (37%), Positives = 21/37 (56%) Frame = -3 Query: 425 NAVFVMGDNRNNSYDSHVWGPLPAKNILGRSIFRYXP 315 N V+ D+ NN +DS +G + K+I+G RY P Sbjct: 128 NNFVVLNDHDNNQHDSRQFGLIDKKDIIGNISLRYYP 164
>LEPH_STAAU (P0A066) Inactive signal peptidase IA| Length = 174 Score = 32.0 bits (71), Expect = 0.64 Identities = 14/37 (37%), Positives = 21/37 (56%) Frame = -3 Query: 425 NAVFVMGDNRNNSYDSHVWGPLPAKNILGRSIFRYXP 315 N V+ D+ NN +DS +G + K+I+G RY P Sbjct: 128 NNFVVLNDHDNNQHDSRQFGLIDKKDIIGNISLRYYP 164
>LEPH_STAAS (Q6GAW2) Inactive signal peptidase IA| Length = 174 Score = 32.0 bits (71), Expect = 0.64 Identities = 14/37 (37%), Positives = 21/37 (56%) Frame = -3 Query: 425 NAVFVMGDNRNNSYDSHVWGPLPAKNILGRSIFRYXP 315 N V+ D+ NN +DS +G + K+I+G RY P Sbjct: 128 NNFVVLNDHDNNQHDSRQFGLIDKKDIIGNISLRYYP 164
>LEPH_STAAR (Q6GIC4) Inactive signal peptidase IA| Length = 174 Score = 32.0 bits (71), Expect = 0.64 Identities = 14/37 (37%), Positives = 21/37 (56%) Frame = -3 Query: 425 NAVFVMGDNRNNSYDSHVWGPLPAKNILGRSIFRYXP 315 N V+ D+ NN +DS +G + K+I+G RY P Sbjct: 128 NNFVVLNDHDNNQHDSRQFGLIDKKDIIGNISLRYYP 164
>LEPH_STAAN (P0A064) Inactive signal peptidase IA| Length = 174 Score = 32.0 bits (71), Expect = 0.64 Identities = 14/37 (37%), Positives = 21/37 (56%) Frame = -3 Query: 425 NAVFVMGDNRNNSYDSHVWGPLPAKNILGRSIFRYXP 315 N V+ D+ NN +DS +G + K+I+G RY P Sbjct: 128 NNFVVLNDHDNNQHDSRQFGLIDKKDIIGNISLRYYP 164
>LEPH_STAAM (P0A063) Inactive signal peptidase IA| Length = 174 Score = 32.0 bits (71), Expect = 0.64 Identities = 14/37 (37%), Positives = 21/37 (56%) Frame = -3 Query: 425 NAVFVMGDNRNNSYDSHVWGPLPAKNILGRSIFRYXP 315 N V+ D+ NN +DS +G + K+I+G RY P Sbjct: 128 NNFVVLNDHDNNQHDSRQFGLIDKKDIIGNISLRYYP 164
>LEPH_STAAC (Q5HHC0) Inactive signal peptidase IA| Length = 174 Score = 31.6 bits (70), Expect = 0.83 Identities = 14/37 (37%), Positives = 20/37 (54%) Frame = -3 Query: 425 NAVFVMGDNRNNSYDSHVWGPLPAKNILGRSIFRYXP 315 N V+ D NN +DS +G + K+I+G RY P Sbjct: 128 NNFVVLNDQDNNKHDSRQFGLIDKKDIIGNVSLRYYP 164
>LEP_STAAW (P0A069) Signal peptidase IB (EC 3.4.21.89) (SPase IB) (Leader| peptidase IB) Length = 191 Score = 31.2 bits (69), Expect = 1.1 Identities = 14/33 (42%), Positives = 20/33 (60%) Frame = -3 Query: 413 VMGDNRNNSYDSHVWGPLPAKNILGRSIFRYXP 315 V+GDNR S DS +G + I+G+ FR+ P Sbjct: 144 VLGDNREVSKDSRAFGLIDEDQIVGKVSFRFWP 176
>LEP_STAAU (P0A070) Signal peptidase IB (EC 3.4.21.89) (SPase IB) (Leader| peptidase IB) Length = 191 Score = 31.2 bits (69), Expect = 1.1 Identities = 14/33 (42%), Positives = 20/33 (60%) Frame = -3 Query: 413 VMGDNRNNSYDSHVWGPLPAKNILGRSIFRYXP 315 V+GDNR S DS +G + I+G+ FR+ P Sbjct: 144 VLGDNREVSKDSRAFGLIDEDQIVGKVSFRFWP 176
>LEP_STAAS (Q6GAW1) Signal peptidase IB (EC 3.4.21.89) (SPase IB) (Leader| peptidase IB) Length = 191 Score = 31.2 bits (69), Expect = 1.1 Identities = 14/33 (42%), Positives = 20/33 (60%) Frame = -3 Query: 413 VMGDNRNNSYDSHVWGPLPAKNILGRSIFRYXP 315 V+GDNR S DS +G + I+G+ FR+ P Sbjct: 144 VLGDNREVSKDSRAFGLIDEDQIVGKVSFRFWP 176
>LEP_STAAR (Q6GIC3) Signal peptidase IB (EC 3.4.21.89) (SPase IB) (Leader| peptidase IB) Length = 191 Score = 31.2 bits (69), Expect = 1.1 Identities = 14/33 (42%), Positives = 20/33 (60%) Frame = -3 Query: 413 VMGDNRNNSYDSHVWGPLPAKNILGRSIFRYXP 315 V+GDNR S DS +G + I+G+ FR+ P Sbjct: 144 VLGDNREVSKDSRAFGLIDEDQIVGKVSFRFWP 176
>LEP_STAAN (P0A068) Signal peptidase IB (EC 3.4.21.89) (SPase IB) (Leader| peptidase IB) Length = 191 Score = 31.2 bits (69), Expect = 1.1 Identities = 14/33 (42%), Positives = 20/33 (60%) Frame = -3 Query: 413 VMGDNRNNSYDSHVWGPLPAKNILGRSIFRYXP 315 V+GDNR S DS +G + I+G+ FR+ P Sbjct: 144 VLGDNREVSKDSRAFGLIDEDQIVGKVSFRFWP 176
>LEP_STAAM (P0A067) Signal peptidase IB (EC 3.4.21.89) (SPase IB) (Leader| peptidase IB) Length = 191 Score = 31.2 bits (69), Expect = 1.1 Identities = 14/33 (42%), Positives = 20/33 (60%) Frame = -3 Query: 413 VMGDNRNNSYDSHVWGPLPAKNILGRSIFRYXP 315 V+GDNR S DS +G + I+G+ FR+ P Sbjct: 144 VLGDNREVSKDSRAFGLIDEDQIVGKVSFRFWP 176
>LEP_STAAC (Q5HHB9) Signal peptidase IB (EC 3.4.21.89) (SPase IB) (Leader| peptidase IB) Length = 191 Score = 31.2 bits (69), Expect = 1.1 Identities = 14/33 (42%), Positives = 20/33 (60%) Frame = -3 Query: 413 VMGDNRNNSYDSHVWGPLPAKNILGRSIFRYXP 315 V+GDNR S DS +G + I+G+ FR+ P Sbjct: 144 VLGDNREVSKDSRAFGLIDEDQIVGKVSFRFWP 176
>LEP_BACLI (P42668) Signal peptidase I (EC 3.4.21.89) (SPase I) (Leader| peptidase I) Length = 186 Score = 31.2 bits (69), Expect = 1.1 Identities = 19/46 (41%), Positives = 23/46 (50%), Gaps = 1/46 (2%) Frame = -3 Query: 428 ENAVFVMGDNRNNSYDS-HVWGPLPAKNILGRSIFRYXPPGRIGST 294 E FVMGDNR S DS + G + K + G S F + P I T Sbjct: 140 EGKYFVMGDNRQRSMDSRNGLGLIDKKRVAGTSQFVFFPFNEIRKT 185
>LEP2_BACAM (P41025) Signal peptidase I (EC 3.4.21.89) (SPase I) (Leader| peptidase I) Length = 193 Score = 30.0 bits (66), Expect = 2.4 Identities = 19/35 (54%), Positives = 22/35 (62%), Gaps = 1/35 (2%) Frame = -3 Query: 416 FVMGDNRNNSYDSHVWGPLPAKN-ILGRSIFRYXP 315 FVMGDNR NS DS L A+N I+G S F + P Sbjct: 151 FVMGDNRLNSMDSRNGLGLIAENRIVGTSKFVFFP 185
>TRAF_RHISN (P55417) Probable conjugal transfer protein traF precursor| Length = 188 Score = 29.6 bits (65), Expect = 3.2 Identities = 13/29 (44%), Positives = 18/29 (62%), Gaps = 2/29 (6%) Frame = -3 Query: 395 NNSYDSHVWGPLPAKNILG--RSIFRYXP 315 + SYDS +GP+PA ILG + + Y P Sbjct: 160 SGSYDSRYFGPIPAAGILGLAQEVLTYAP 188
>TRM1_AERPE (Q9YDY7) N(2),N(2)-dimethylguanosine tRNA methyltransferase (EC| 2.1.1.32) (tRNA(guanine-26,N(2)-N(2)) methyltransferase) (tRNA 2,2-dimethylguanosine-26 methyltransferase) (tRNA(m(2,2)G26)dimethyltransferase) Length = 401 Score = 29.3 bits (64), Expect = 4.1 Identities = 18/48 (37%), Positives = 29/48 (60%) Frame = +1 Query: 232 FVNLTSMSESGFVSGPKQSRVVDPIRPGGQYRKIDLPNMFFAGRGPHT 375 +V+LTS++ V+ PK+S+VV+ +R G YR + F+G G T Sbjct: 340 YVSLTSVASKARVNTPKKSKVVELLRSMG-YRAV---ATHFSGEGVRT 383
>LEPT_BACSU (P71013) Signal peptidase I T (EC 3.4.21.89) (SPase I) (Leader| peptidase I) Length = 193 Score = 28.9 bits (63), Expect = 5.4 Identities = 17/35 (48%), Positives = 21/35 (60%), Gaps = 1/35 (2%) Frame = -3 Query: 416 FVMGDNRNNSYDS-HVWGPLPAKNILGRSIFRYXP 315 FVMGDNR NS DS + G + I+G S F + P Sbjct: 151 FVMGDNRLNSMDSRNGLGLIAEDRIVGTSKFVFFP 185
>IMP1_YEAST (P28627) Mitochondrial inner membrane protease subunit 1 (EC| 3.4.99.-) Length = 189 Score = 28.9 bits (63), Expect = 5.4 Identities = 13/33 (39%), Positives = 20/33 (60%) Frame = -3 Query: 428 ENAVFVMGDNRNNSYDSHVWGPLPAKNILGRSI 330 E V+V GDN ++S DS + LP I+G+ + Sbjct: 122 EGHVWVTGDNLSHSLDSRTYNALPMGLIMGKIV 154
>LEPQ_BACNA (Q57350) Signal peptidase I P (EC 3.4.21.89) (SPase I) (Leader| peptidase I) Length = 185 Score = 28.9 bits (63), Expect = 5.4 Identities = 18/39 (46%), Positives = 22/39 (56%), Gaps = 1/39 (2%) Frame = -3 Query: 416 FVMGDNRNNSYDS-HVWGPLPAKNILGRSIFRYXPPGRI 303 FVMGDNR NS DS + G K+I+G + P RI Sbjct: 143 FVMGDNRQNSMDSRNGLGLFNKKDIVGVEELVFFPLDRI 181
>TRAF_AGRT5 (Q44350) Conjugal transfer protein traF precursor| Length = 176 Score = 28.5 bits (62), Expect = 7.1 Identities = 12/28 (42%), Positives = 18/28 (64%), Gaps = 2/28 (7%) Frame = -3 Query: 392 NSYDSHVWGPLPAKNILG--RSIFRYXP 315 +SYDS +GP+P +LG R +F + P Sbjct: 149 SSYDSRYFGPIPDSGLLGLARPVFTFDP 176
>LEPU_BACSU (P42959) Signal peptidase I U (EC 3.4.21.89) (SPase I) (Leader| peptidase I) Length = 187 Score = 28.5 bits (62), Expect = 7.1 Identities = 16/39 (41%), Positives = 23/39 (58%), Gaps = 1/39 (2%) Frame = -3 Query: 416 FVMGDNRNNSYDSHVWGPLPAK-NILGRSIFRYXPPGRI 303 FVMGDNR NS DS +P++ +I+G + P G + Sbjct: 145 FVMGDNRLNSLDSRNGMGMPSEDDIIGTESLVFYPFGEM 183
>POLG_CX16G (Q65900) Genome polyprotein [Contains: Coat protein VP4 (P1A); Coat| protein VP2 (P1B); Coat protein VP3 (P1C); Coat protein VP1 (P1D); Picornain 2A (EC 3.4.22.29) (Core protein P2A); Core protein P2B; Core protein P2C; Core protein P3A; Genome Length = 2192 Score = 28.1 bits (61), Expect = 9.2 Identities = 14/32 (43%), Positives = 18/32 (56%) Frame = -3 Query: 329 FRYXPPGRIGSTTRDCFGPETKPDSLIDVKLT 234 + Y PPG T+RD F +T + I VKLT Sbjct: 717 YMYVPPGAPKPTSRDSFAWQTATNPSIFVKLT 748
>TRAF_AGRTU (Q44364) Conjugal transfer protein traF precursor| Length = 176 Score = 28.1 bits (61), Expect = 9.2 Identities = 12/28 (42%), Positives = 18/28 (64%), Gaps = 2/28 (7%) Frame = -3 Query: 392 NSYDSHVWGPLPAKNILG--RSIFRYXP 315 +SYDS +GP+P +LG R +F + P Sbjct: 149 SSYDSRYFGPVPDSGLLGLARPVFTFDP 176 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 58,680,973 Number of Sequences: 219361 Number of extensions: 1074181 Number of successful extensions: 2418 Number of sequences better than 10.0: 49 Number of HSP's better than 10.0 without gapping: 2383 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2417 length of database: 80,573,946 effective HSP length: 101 effective length of database: 58,418,485 effective search space used: 2395157885 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
