| Clone Name | rbags25k16 |
|---|---|
| Clone Library Name | barley_pub |
>emb|AL732618.6| Human DNA sequence from clone RP11-25L19 on chromosome 1, complete sequence Length = 95333 Score = 46.1 bits (23), Expect = 0.044 Identities = 23/23 (100%) Strand = Plus / Plus Query: 61 gccggtatacaagtaagatcagc 83 ||||||||||||||||||||||| Sbjct: 4298 gccggtatacaagtaagatcagc 4320
>emb|CR769784.10| Zebrafish DNA sequence from clone DKEY-3N10 in linkage group 1, complete sequence Length = 230420 Score = 42.1 bits (21), Expect = 0.68 Identities = 21/21 (100%) Strand = Plus / Plus Query: 39 ctaatatgtatatataagaat 59 ||||||||||||||||||||| Sbjct: 91656 ctaatatgtatatataagaat 91676
>emb|AL138849.12| Human DNA sequence from clone RP5-965L7 on chromosome 1p32.1-33 Contains the 3' ends of genes FLJ34719 and KIAA0191, complete sequence Length = 127006 Score = 42.1 bits (21), Expect = 0.68 Identities = 21/21 (100%) Strand = Plus / Plus Query: 40 taatatgtatatataagaata 60 ||||||||||||||||||||| Sbjct: 6250 taatatgtatatataagaata 6270
>emb|CR812957.13| Zebrafish DNA sequence from clone DKEY-41L5 in linkage group 1, complete sequence Length = 220462 Score = 42.1 bits (21), Expect = 0.68 Identities = 21/21 (100%) Strand = Plus / Minus Query: 39 ctaatatgtatatataagaat 59 ||||||||||||||||||||| Sbjct: 204527 ctaatatgtatatataagaat 204507
>emb|BX936312.12| Zebrafish DNA sequence from clone DKEY-204O5 in linkage group 7, complete sequence Length = 158510 Score = 40.1 bits (20), Expect = 2.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 140 tagctagtgtcagcatcagc 159 |||||||||||||||||||| Sbjct: 64519 tagctagtgtcagcatcagc 64538
>emb|AL132673.17|HSJ474G15 Human DNA sequence from clone RP3-474G15 on chromosome 6q12-14.1 Contains a novel pseudogene and part of a novel gene, complete sequence Length = 63385 Score = 40.1 bits (20), Expect = 2.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 39 ctaatatgtatatataagaa 58 |||||||||||||||||||| Sbjct: 59828 ctaatatgtatatataagaa 59847
>emb|AL591177.14| Mouse DNA sequence from clone RP23-399H5 on chromosome 11, complete sequence Length = 193004 Score = 40.1 bits (20), Expect = 2.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 71 aagtaagatcagcaaagctg 90 |||||||||||||||||||| Sbjct: 84708 aagtaagatcagcaaagctg 84727
>emb|AL935276.16| Zebrafish DNA sequence from clone CH211-273J2, complete sequence Length = 164481 Score = 40.1 bits (20), Expect = 2.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 140 tagctagtgtcagcatcagc 159 |||||||||||||||||||| Sbjct: 6669 tagctagtgtcagcatcagc 6688
>gb|AC163630.5| Mus musculus BAC clone RP23-139M2 from chromosome 16, complete sequence Length = 231703 Score = 40.1 bits (20), Expect = 2.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 35 acatctaatatgtatatata 54 |||||||||||||||||||| Sbjct: 174232 acatctaatatgtatatata 174213
>gb|AC173707.2| Mus musculus BAC clone RP23-296A12 from chromosome 16, complete sequence Length = 171458 Score = 40.1 bits (20), Expect = 2.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 35 acatctaatatgtatatata 54 |||||||||||||||||||| Sbjct: 115714 acatctaatatgtatatata 115733
>gb|AC002324.1|AC002324 Mus musculus chromosome 11, clone 475_H_14, complete sequence Length = 171952 Score = 40.1 bits (20), Expect = 2.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 71 aagtaagatcagcaaagctg 90 |||||||||||||||||||| Sbjct: 282 aagtaagatcagcaaagctg 263
>emb|AL844149.4| Mouse DNA sequence from clone RP23-194D5 on chromosome 4, complete sequence Length = 199774 Score = 40.1 bits (20), Expect = 2.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 32 aaaacatctaatatgtatatataa 55 |||||||||||||| ||||||||| Sbjct: 109535 aaaacatctaatatatatatataa 109558 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,233,871 Number of Sequences: 3902068 Number of extensions: 2233871 Number of successful extensions: 282982 Number of sequences better than 10.0: 12 Number of HSP's better than 10.0 without gapping: 12 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 282935 Number of HSP's gapped (non-prelim): 47 length of query: 212 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 190 effective length of database: 17,147,199,772 effective search space: 3257967956680 effective search space used: 3257967956680 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)