>ref|NM_187521.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1680

 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 105/129 (81%)
 Strand = Plus / Minus

                                                                        
Query: 569  tcttcacattctcaggctcctcggatatctgaagatcggatgcagtttgcatgttctgaa 628
            |||||||||| | ||||||||| |||  |  |||||| ||  ||||||||||| ||||||
Sbjct: 1516 tcttcacatttttaggctcctcagattccacaagatcagaaacagtttgcatgctctgaa 1457

                                                                        
Query: 629  caagaggagtttcaggggtgacacccatccccttggagagtgctacatacttaagtacta 688
            || ||||  ||||| || ||| ||||||||| |  || || ||||||||||| |||||||
Sbjct: 1456 caggagggttttcaaggttgatacccatcccttgcgaaagcgctacatactttagtacta 1397

                     
Query: 689  gttgcttgt 697
            | |||||||
Sbjct: 1396 gctgcttgt 1388

>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 105/129 (81%)
 Strand = Plus / Minus

                                                                           
Query: 569     tcttcacattctcaggctcctcggatatctgaagatcggatgcagtttgcatgttctgaa 628
               |||||||||| | ||||||||| |||  |  |||||| ||  ||||||||||| ||||||
Sbjct: 8606708 tcttcacatttttaggctcctcagattccacaagatcagaaacagtttgcatgctctgaa 8606649

                                                                           
Query: 629     caagaggagtttcaggggtgacacccatccccttggagagtgctacatacttaagtacta 688
               || ||||  ||||| || ||| ||||||||| |  || || ||||||||||| |||||||
Sbjct: 8606648 caggagggttttcaaggttgatacccatcccttgcgaaagcgctacatactttagtacta 8606589

                        
Query: 689     gttgcttgt 697
               | |||||||
Sbjct: 8606588 gctgcttgt 8606580

>gb|AC135206.3| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1041F02,
             complete sequence
          Length = 137327

 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 105/129 (81%)
 Strand = Plus / Minus

                                                                         
Query: 569   tcttcacattctcaggctcctcggatatctgaagatcggatgcagtttgcatgttctgaa 628
             |||||||||| | ||||||||| |||  |  |||||| ||  ||||||||||| ||||||
Sbjct: 87680 tcttcacatttttaggctcctcagattccacaagatcagaaacagtttgcatgctctgaa 87621

                                                                         
Query: 629   caagaggagtttcaggggtgacacccatccccttggagagtgctacatacttaagtacta 688
             || ||||  ||||| || ||| ||||||||| |  || || ||||||||||| |||||||
Sbjct: 87620 caggagggttttcaaggttgatacccatcccttgcgaaagcgctacatactttagtacta 87561

                      
Query: 689   gttgcttgt 697
             | |||||||
Sbjct: 87560 gctgcttgt 87552

>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
               sequence
          Length = 36192742

 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 105/129 (81%)
 Strand = Plus / Minus

                                                                           
Query: 569     tcttcacattctcaggctcctcggatatctgaagatcggatgcagtttgcatgttctgaa 628
               |||||||||| | ||||||||| |||  |  |||||| ||  ||||||||||| ||||||
Sbjct: 8604543 tcttcacatttttaggctcctcagattccacaagatcagaaacagtttgcatgctctgaa 8604484

                                                                           
Query: 629     caagaggagtttcaggggtgacacccatccccttggagagtgctacatacttaagtacta 688
               || ||||  ||||| || ||| ||||||||| |  || || ||||||||||| |||||||
Sbjct: 8604483 caggagggttttcaaggttgatacccatcccttgcgaaagcgctacatactttagtacta 8604424

                        
Query: 689     gttgcttgt 697
               | |||||||
Sbjct: 8604423 gctgcttgt 8604415

>dbj|AK070551.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023061L19, full
            insert sequence
          Length = 3032

 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 105/129 (81%)
 Strand = Plus / Minus

                                                                        
Query: 569  tcttcacattctcaggctcctcggatatctgaagatcggatgcagtttgcatgttctgaa 628
            |||||||||| | ||||||||| |||  |  |||||| ||  ||||||||||| ||||||
Sbjct: 2307 tcttcacatttttaggctcctcagattccacaagatcagaaacagtttgcatgctctgaa 2248

                                                                        
Query: 629  caagaggagtttcaggggtgacacccatccccttggagagtgctacatacttaagtacta 688
            || ||||  ||||| || ||| ||||||||| |  || || ||||||||||| |||||||
Sbjct: 2247 caggagggttttcaaggttgatacccatcccttgcgaaagcgctacatactttagtacta 2188

                     
Query: 689  gttgcttgt 697
            | |||||||
Sbjct: 2187 gctgcttgt 2179

>gb|AC153965.4| Mus musculus 10 BAC RP24-377E21 (Roswell Park Cancer Institute (C57BL/6J
              Male) Mouse BAC Library) complete sequence
          Length = 166350

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                     
Query: 414    tgattcatttttcagtgttttct 436
              |||||||||||||||||||||||
Sbjct: 159891 tgattcatttttcagtgttttct 159913

>gb|AY110141.1| Zea mays CL39723_1 mRNA sequence
          Length = 1080

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                          
Query: 667 agtgctacatacttaagtactagttgcttgt 697
           ||||||||||||  |||||||||||||||||
Sbjct: 524 agtgctacataccgaagtactagttgcttgt 494

>gb|AC157017.3| Mus musculus 10 BAC RP24-559D16 (Roswell Park Cancer Institute
             (C57BL/6J Male) Mouse BAC Library) complete sequence
          Length = 170093

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 414   tgattcatttttcagtgttttct 436
             |||||||||||||||||||||||
Sbjct: 61770 tgattcatttttcagtgttttct 61792

>gb|AC164075.4| Mus musculus chromosome 7, clone RP24-259P13, complete sequence
          Length = 159578

 Score = 44.1 bits (22), Expect = 0.61
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 476    cattgcctacttcttctgagtc 497
              ||||||||||||||||||||||
Sbjct: 124596 cattgcctacttcttctgagtc 124617

>gb|AC109232.17| Mus musculus chromosome 7, clone RP23-423P21, complete sequence
          Length = 201262

 Score = 44.1 bits (22), Expect = 0.61
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 476   cattgcctacttcttctgagtc 497
             ||||||||||||||||||||||
Sbjct: 31976 cattgcctacttcttctgagtc 31997

>gb|U33425.1|PMU33425 Plasmodium malariae cysteine proteinase gene, partial cds
          Length = 519

 Score = 44.1 bits (22), Expect = 0.61
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 91  tagtagtaacagtttacaaaaa 112
           ||||||||||||||||||||||
Sbjct: 456 tagtagtaacagtttacaaaaa 477

>gb|AE008692.1| Zymomonas mobilis subsp. mobilis ZM4, complete genome
          Length = 2056416

 Score = 44.1 bits (22), Expect = 0.61
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                        
Query: 44     gaatattggcacgaataatacctgcc 69
              ||||||||||||| ||||||||||||
Sbjct: 103600 gaatattggcacgcataatacctgcc 103575

>gb|AC116096.3| Homo sapiens chromosome 3 clone RP11-669C19, complete sequence
          Length = 164379

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 174    tagcttcagcagaataaaatg 194
              |||||||||||||||||||||
Sbjct: 160328 tagcttcagcagaataaaatg 160308

>emb|AJ243059.1|SPN243059 Streptococcus pneumoniae partial pbp2b, recR, ddl and partial murF
            genes, strain 29044
          Length = 3557

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 434  tctggtcacgacttggatcga 454
            |||||||||||||||||||||
Sbjct: 1688 tctggtcacgacttggatcga 1668

>emb|BX470105.10| Zebrafish DNA sequence from clone CH211-252D21 in linkage group 8,
             complete sequence
          Length = 155300

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 178   ttcagcagaataaaatgccat 198
             |||||||||||||||||||||
Sbjct: 16028 ttcagcagaataaaatgccat 16048

>gb|AC107621.2| Homo sapiens chromosome 3 clone RP11-632N21, complete sequence
          Length = 153582

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 174    tagcttcagcagaataaaatg 194
              |||||||||||||||||||||
Sbjct: 131191 tagcttcagcagaataaaatg 131211

>ref|XM_590876.2| PREDICTED: Bos taurus similar to GDNF family receptor alpha 3
           preproprotein (LOC540009), mRNA
          Length = 1392

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 415 gattcatttttcagtgttttctggtcac 442
           |||||||||| ||| |||||||||||||
Sbjct: 634 gattcattttccagggttttctggtcac 607

>gb|AC140073.4| Mus musculus BAC clone RP23-282N20 from chromosome 19, complete
             sequence
          Length = 245582

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 183   cagaataaaatgccatcttc 202
             ||||||||||||||||||||
Sbjct: 33893 cagaataaaatgccatcttc 33874

>ref|XM_538648.2| PREDICTED: Canis familiaris similar to GDNF family receptor alpha 3
           preproprotein (LOC481527), mRNA
          Length = 1200

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 415 gattcatttttcagtgttttctggtcac 442
           |||||||||| ||| |||||||||||||
Sbjct: 442 gattcattttccagggttttctggtcac 415

>gb|AC124347.4| Mus musculus BAC clone RP24-462J14 from chromosome 19, complete sequence
          Length = 179915

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 183    cagaataaaatgccatcttc 202
              ||||||||||||||||||||
Sbjct: 141472 cagaataaaatgccatcttc 141453

>gb|AC112261.4| Mus musculus BAC clone RP23-204O17 from 3, complete sequence
          Length = 186290

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 523    tgagtcttgctgcttgcttcagtg 546
              ||||||||||| ||||||||||||
Sbjct: 118329 tgagtcttgcttcttgcttcagtg 118306

>ref|XM_760698.1| Theileria parva strain Muguga chromosome 1 glutathione synthetase
            (TP01_0264) partial mRNA
          Length = 1890

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 420  atttttcagtgttttctggt 439
            ||||||||||||||||||||
Sbjct: 1381 atttttcagtgttttctggt 1362

>emb|BX571851.16| Zebrafish DNA sequence from clone DKEYP-102B12 in linkage group 9,
             complete sequence
          Length = 63718

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 541   tcagtgctgtcgcagctatt 560
             ||||||||||||||||||||
Sbjct: 25964 tcagtgctgtcgcagctatt 25983

>gb|AC092970.10| Homo sapiens 3 BAC RP11-571C23 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 71001

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 501   aatttcatttctaatgtcct 520
             ||||||||||||||||||||
Sbjct: 57916 aatttcatttctaatgtcct 57935

>emb|CR388143.6| Zebrafish DNA sequence from clone DKEY-189O20 in linkage group 21,
              complete sequence
          Length = 243457

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 178    ttcagcagaataaaatgcca 197
              ||||||||||||||||||||
Sbjct: 199989 ttcagcagaataaaatgcca 200008

>emb|AL645855.25| Mouse DNA sequence from clone RP23-122N23 on chromosome 11 Contains a
              novel gene, complete sequence
          Length = 203914

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 519    ctcctgagtcttgctgcttgcttcagtg 546
              ||||| || |||||||||||||||||||
Sbjct: 129287 ctcctcagccttgctgcttgcttcagtg 129260

>gb|AF449447.1| Mus musculus C3H chromosome 3 hyplip1 region
          Length = 176641

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 523    tgagtcttgctgcttgcttcagtg 546
              ||||||||||| ||||||||||||
Sbjct: 136612 tgagtcttgcttcttgcttcagtg 136635

>gb|AC154802.3| Mus musculus BAC clone RP24-502O7 from chromosome 12, complete sequence
          Length = 164001

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 565    acactcttcacattctcagg 584
              ||||||||||||||||||||
Sbjct: 148276 acactcttcacattctcagg 148257

>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7,
              complete sequence
          Length = 29644043

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 349    atgttctcactgtatttcac 368
              ||||||||||||||||||||
Sbjct: 558302 atgttctcactgtatttcac 558283

>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 346      gcaatgttctcactgtattt 365
                ||||||||||||||||||||
Sbjct: 17447071 gcaatgttctcactgtattt 17447052

>emb|BX664747.11| Zebrafish DNA sequence from clone CH211-149D1 in linkage group 5,
             complete sequence
          Length = 115297

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 95    agtaacagtttacaaaaatg 114
             ||||||||||||||||||||
Sbjct: 30270 agtaacagtttacaaaaatg 30289

>dbj|AP004999.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0040H05
          Length = 172623

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 346   gcaatgttctcactgtattt 365
             ||||||||||||||||||||
Sbjct: 59068 gcaatgttctcactgtattt 59049

>emb|AL831774.17| Mouse DNA sequence from clone RP23-301P13 on chromosome 4, complete
             sequence
          Length = 163802

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 641   caggggtgacacccatcccc 660
             ||||||||||||||||||||
Sbjct: 99964 caggggtgacacccatcccc 99945

>emb|BX649324.3| Zebrafish DNA sequence from clone DKEY-85M15 in linkage group 4,
             complete sequence
          Length = 218137

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 420   atttttcagtgttttctggt 439
             ||||||||||||||||||||
Sbjct: 31058 atttttcagtgttttctggt 31039

>dbj|AP003759.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
              clone:OJ1567_G09
          Length = 121388

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 349    atgttctcactgtatttcac 368
              ||||||||||||||||||||
Sbjct: 112214 atgttctcactgtatttcac 112195

>gb|AE016877.1| Bacillus cereus ATCC 14579, complete genome
          Length = 5411809

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 315     cgcctcttggtataagaaca 334
               ||||||||||||||||||||
Sbjct: 2932670 cgcctcttggtataagaaca 2932689

>gb|AC159269.3| Mus musculus BAC clone RP23-426N14 from chromosome 12, complete
             sequence
          Length = 184137

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 565   acactcttcacattctcagg 584
             ||||||||||||||||||||
Sbjct: 36961 acactcttcacattctcagg 36942

>emb|AL669959.22| Mouse DNA sequence from clone RP23-221H6 on chromosome 4, complete
              sequence
          Length = 213801

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 422    ttttcagtgttttctggtca 441
              ||||||||||||||||||||
Sbjct: 171489 ttttcagtgttttctggtca 171470


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6,649,161
Number of Sequences: 3902068
Number of extensions: 6649161
Number of successful extensions: 172497
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 38
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 172201
Number of HSP's gapped (non-prelim): 296
length of query: 697
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 674
effective length of database: 17,143,297,704
effective search space: 11554582652496
effective search space used: 11554582652496
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)