ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbags25k02 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AF161718.1|AF161718 Triticum aestivum Sec61p (sec61) mRNA, complete cds Length = 1630 Score = 648 bits (327), Expect = 0.0 Identities = 446/484 (92%), Gaps = 10/484 (2%) Strand = Plus / Minus Query: 175 ctacagatttctcaactgtaaataagtcgggc-aacctaaacagaatttaatctccggtt 233 ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 1588 ctacagatttctcaactgtaaataagtcggggtaacctaaacagaatttaatctccggtt 1529 Query: 234 acaaccaaaaca----gccagccaagcagtactgtgacagtctagaaagact-----tga 284 ||||||| |||| ||||||||||||||| || ||| ||||| ||||||| || Sbjct: 1528 acaaccacaacagccagccagccaagcagtattgcgactgtctaaaaagactcgagctgg 1469 Query: 285 gctgtagccataacatgctcccaaagctatcatgtatcaatcagaacccaaagaaaccaa 344 ||||||||||||||||||||||||||||||||||| ||||||| ||||| || ||||||| Sbjct: 1468 gctgtagccataacatgctcccaaagctatcatgtttcaatcaaaacccgaaaaaaccaa 1409 Query: 345 gctcggtcgccctctccttctcgaaggtctcaaagtactggtatatgatggtaacagcca 404 |||| || ||||||||||||||||||||||||||||||||||||||||||| | |||||| Sbjct: 1408 gctctgttgccctctccttctcgaaggtctcaaagtactggtatatgatggaatcagcca 1349 Query: 405 acagaataccggttcctgaaccaattgcgcccatgaaatcagccagaacagtcaatgcac 464 ||| ||| ||||||||||||||||||||||||||||||||||| |||||||||||||| | Sbjct: 1348 acaaaattccggttcctgaaccaattgcgcccatgaaatcagcaagaacagtcaatgcgc 1289 Query: 465 cgatgcatactccaccaaatgcagcagcagtagggatgtatctgttcagttccttctgca 524 ||||||| ||||||||||||||||| ||||||||||||||| ||||||||||||| |||| Sbjct: 1288 cgatgcacactccaccaaatgcagcggcagtagggatgtatttgttcagttccttttgca 1229 Query: 525 agtttgactcgcgatggcctggcataaccatttgttgttccttcagctgcttagcgacat 584 ||||||||| ||||| |||||||| ||||||||||||||||||||||||||||| |||| Sbjct: 1228 ggtttgactcacgatgacctggcatcaccatttgttgttccttcagctgcttagcaacat 1169 Query: 585 ccttggctgatgaaccagagacttcaatccatgtttttgagaagagagcacatgctgaca 644 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1168 ccttggctgatgaaccagagacttcaatccatgtttttgagaagagagcacatgctgaca 1109 Query: 645 gcat 648 |||| Sbjct: 1108 gcat 1105
>dbj|AK100597.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023107A15, full insert sequence Length = 2132 Score = 414 bits (209), Expect = e-112 Identities = 290/317 (91%) Strand = Plus / Minus Query: 332 ccaaagaaaccaagctcggtcgccctctccttctcgaaggtctcaaagtactggtatatg 391 |||||||||||||||||||| |||||||| |||||||| ||||| ||||||||||| ||| Sbjct: 1573 ccaaagaaaccaagctcggttgccctctctttctcgaatgtctcgaagtactggtaaatg 1514 Query: 392 atggtaacagccaacagaataccggttcctgaaccaattgcgcccatgaaatcagccaga 451 ||||||||||| | ||||||||| |||||||||||||| || |||||||||||||| ||| Sbjct: 1513 atggtaacagcaagcagaataccagttcctgaaccaatcgcacccatgaaatcagctaga 1454 Query: 452 acagtcaatgcaccgatgcatactccaccaaatgcagcagcagtagggatgtatctgttc 511 |||||||||||||| ||||| ||||||||||||||||||||||| ||||||||||||||| Sbjct: 1453 acagtcaatgcaccaatgcacactccaccaaatgcagcagcagtggggatgtatctgttc 1394 Query: 512 agttccttctgcaagtttgactcgcgatggcctggcataaccatttgttgttccttcagc 571 | ||||||||||||||||||||| |||||||| ||||| ||||||||||||||||||| | Sbjct: 1393 aattccttctgcaagtttgactcacgatggccaggcatcaccatttgttgttccttcaac 1334 Query: 572 tgcttagcgacatccttggctgatgaaccagagacttcaatccatgtttttgagaagaga 631 || ||||| |||||||| || ||||| ||||| |||||||||||||| |||||||||||| Sbjct: 1333 tgtttagcaacatcctttgcagatgagccagatacttcaatccatgtctttgagaagaga 1274 Query: 632 gcacatgctgacagcat 648 ||||| ||||||||||| Sbjct: 1273 gcacaagctgacagcat 1257 Score = 50.1 bits (25), Expect = 0.009 Identities = 62/72 (86%), Gaps = 3/72 (4%) Strand = Plus / Minus Query: 194 aaataagtcgggcaacctaaacagaatttaa--tctccggttacaacca-aaacagccag 250 |||||||||||||||||||||| || ||||| ||||| ||||| ||| |||||||| | Sbjct: 1706 aaataagtcgggcaacctaaactgactttaagctctccaattacatccataaacagccgg 1647 Query: 251 ccaagcagtact 262 ||||| |||||| Sbjct: 1646 ccaagaagtact 1635
>gb|BT017902.1| Zea mays clone EL01N0516D06.c mRNA sequence Length = 1209 Score = 408 bits (206), Expect = e-111 Identities = 296/326 (90%) Strand = Plus / Minus Query: 323 aatcagaacccaaagaaaccaagctcggtcgccctctccttctcgaaggtctcaaagtac 382 ||||| || ||||||||||||||||| || ||||| |||||||||||||| || ||||| Sbjct: 759 aatcaaaaaccaaagaaaccaagctccgttgccctttccttctcgaaggtttcgaagtat 700 Query: 383 tggtatatgatggtaacagccaacagaataccggttcctgaaccaattgcgcccatgaaa 442 ||||||||||| || ||||||| ||| || || ||||||||||||||||| ||||||||| Sbjct: 699 tggtatatgattgtcacagccagcagtattccagttcctgaaccaattgcacccatgaaa 640 Query: 443 tcagccagaacagtcaatgcaccgatgcatactccaccaaatgcagcagcagtagggatg 502 |||||||| ||||||||||| |||||||||||||||||||||||||||||||| |||||| Sbjct: 639 tcagccaggacagtcaatgcgccgatgcatactccaccaaatgcagcagcagtggggatg 580 Query: 503 tatctgttcagttccttctgcaagtttgactcgcgatggcctggcataaccatttgttgt 562 |||| ||||||||||||||||||||||||||| ||||| |||||||| |||||||||||| Sbjct: 579 tatcggttcagttccttctgcaagtttgactcacgatgtcctggcatcaccatttgttgt 520 Query: 563 tccttcagctgcttagcgacatccttggctgatgaaccagagacttcaatccatgttttt 622 ||||| ||||||||||| |||||||| |||||||||||||| ||||||||||| |||||| Sbjct: 519 tccttgagctgcttagcaacatcctttgctgatgaaccagaaacttcaatccacgttttt 460 Query: 623 gagaagagagcacatgctgacagcat 648 ||||| ||||| || ||||||||||| Sbjct: 459 gagaacagagcgcaagctgacagcat 434
>dbj|AK062048.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-044-A12, full insert sequence Length = 1375 Score = 391 bits (197), Expect = e-105 Identities = 287/317 (90%) Strand = Plus / Minus Query: 332 ccaaagaaaccaagctcggtcgccctctccttctcgaaggtctcaaagtactggtatatg 391 ||||||||||||||||| || |||||||| |||||||| ||||| ||||||||||| ||| Sbjct: 1048 ccaaagaaaccaagctcagttgccctctctttctcgaatgtctcgaagtactggtagatg 989 Query: 392 atggtaacagccaacagaataccggttcctgaaccaattgcgcccatgaaatcagccaga 451 || |||||||| | ||||||||| |||||||||||||| || |||||||||||||| ||| Sbjct: 988 atagtaacagcaagcagaataccagttcctgaaccaatagcacccatgaaatcagctaga 929 Query: 452 acagtcaatgcaccgatgcatactccaccaaatgcagcagcagtagggatgtatctgttc 511 |||||||||||||| ||||| ||||||||||||||||| ||||| ||||||||||||||| Sbjct: 928 acagtcaatgcaccaatgcacactccaccaaatgcagcggcagtggggatgtatctgttc 869 Query: 512 agttccttctgcaagtttgactcgcgatggcctggcataaccatttgttgttccttcagc 571 | ||||||||||||||||||||| |||||||| ||||| |||||||| |||||||||||| Sbjct: 868 aattccttctgcaagtttgactcacgatggccaggcatcaccatttgctgttccttcagc 809 Query: 572 tgcttagcgacatccttggctgatgaaccagagacttcaatccatgtttttgagaagaga 631 || ||||| |||||||| || ||||| ||||| |||||||||||||| |||||||||||| Sbjct: 808 tgtttagcaacatcctttgcagatgagccagatacttcaatccatgtctttgagaagaga 749 Query: 632 gcacatgctgacagcat 648 ||||| ||||||||||| Sbjct: 748 gcacaagctgacagcat 732
>gb|AY110211.1| Zea mays CL336_2 mRNA sequence Length = 1189 Score = 369 bits (186), Expect = 8e-99 Identities = 288/322 (89%) Strand = Plus / Minus Query: 327 agaacccaaagaaaccaagctcggtcgccctctccttctcgaaggtctcaaagtactggt 386 |||| |||||||||||||||||||| ||||| ||||||||||| |||||||||||||||| Sbjct: 897 agaaaccaaagaaaccaagctcggttgccctttccttctcgaatgtctcaaagtactggt 838 Query: 387 atatgatggtaacagccaacagaataccggttcctgaaccaattgcgcccatgaaatcag 446 ||||||| || ||||| | |||||| || |||||||| |||||||||||||||||||||| Sbjct: 837 atatgatagtgacagcgagcagaatgccagttcctgagccaattgcgcccatgaaatcag 778 Query: 447 ccagaacagtcaatgcaccgatgcatactccaccaaatgcagcagcagtagggatgtatc 506 | || ||||| | || || ||||| ||||| |||||||| |||||||| |||||||||| Sbjct: 777 ctaggacagttagcgcgccaatgcacactcctccaaatgctgcagcagttgggatgtatc 718 Query: 507 tgttcagttccttctgcaagtttgactcgcgatggcctggcataaccatttgttgttcct 566 ||||||||||| | |||| ||||||||| |||||||||||||| ||||||||||| |||| Sbjct: 717 tgttcagttccctttgcaggtttgactcacgatggcctggcatcaccatttgttgctcct 658 Query: 567 tcagctgcttagcgacatccttggctgatgaaccagagacttcaatccatgtttttgaga 626 ||||||||||||| || ||||| |||||||||||||| |||||||||||||| ||||||| Sbjct: 657 tcagctgcttagcaacgtccttcgctgatgaaccagaaacttcaatccatgtctttgaga 598 Query: 627 agagagcacatgctgacagcat 648 |||||||||| ||||||||||| Sbjct: 597 agagagcacaggctgacagcat 576
>dbj|AK062070.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-044-E03, full insert sequence Length = 1621 Score = 367 bits (185), Expect = 3e-98 Identities = 290/325 (89%) Strand = Plus / Minus Query: 324 atcagaacccaaagaaaccaagctcggtcgccctctccttctcgaaggtctcaaagtact 383 |||| |||||||||||||| |||||||| ||||| || |||||||| |||||||| |||| Sbjct: 1336 atcaaaacccaaagaaacctagctcggtagccctttctttctcgaatgtctcaaaatact 1277 Query: 384 ggtatatgatggtaacagccaacagaataccggttcctgaaccaattgcgcccatgaaat 443 |||| ||||| |||||||| | ||| || || ||||||||||||||||| |||||||||| Sbjct: 1276 ggtagatgattgtaacagcgagcagtatcccagttcctgaaccaattgcacccatgaaat 1217 Query: 444 cagccagaacagtcaatgcaccgatgcatactccaccaaatgcagcagcagtagggatgt 503 |||| || |||||||||||||| ||||| |||||||||||||||||||| |||||||||| Sbjct: 1216 cagctaggacagtcaatgcaccaatgcagactccaccaaatgcagcagctgtagggatgt 1157 Query: 504 atctgttcagttccttctgcaagtttgactcgcgatggcctggcataaccatttgttgtt 563 ||||||||| ||| ||||| || || ||||| |||||||||||||| ||||||||||| | Sbjct: 1156 atctgttcaattctttctgtaaattcgactcacgatggcctggcatcaccatttgttgct 1097 Query: 564 ccttcagctgcttagcgacatccttggctgatgaaccagagacttcaatccatgtttttg 623 |||| ||||| ||||| |||||||| |||||||||||||| |||||||||||||| |||| Sbjct: 1096 ccttgagctgtttagcaacatcctttgctgatgaaccagatacttcaatccatgtctttg 1037 Query: 624 agaagagagcacatgctgacagcat 648 ||||||||||||| ||||||||||| Sbjct: 1036 agaagagagcacaagctgacagcat 1012
>gb|BT016615.1| Zea mays clone Contig448 mRNA sequence Length = 1755 Score = 361 bits (182), Expect = 2e-96 Identities = 290/326 (88%) Strand = Plus / Minus Query: 323 aatcagaacccaaagaaaccaagctcggtcgccctctccttctcgaaggtctcaaagtac 382 ||||| || ||||||||||||||||| |||||||| |||||||| ||||| || ||||| Sbjct: 1531 aatcaaaaaccaaagaaaccaagctcagtcgccctttccttctcaaaggtttcgaagtat 1472 Query: 383 tggtatatgatggtaacagccaacagaataccggttcctgaaccaattgcgcccatgaaa 442 ||||||||||| || ||||| | || ||||| |||||||||||||| || ||||||||| Sbjct: 1471 tggtatatgattgtcacagcgagcaatataccagttcctgaaccaatcgcacccatgaaa 1412 Query: 443 tcagccagaacagtcaatgcaccgatgcatactccaccaaatgcagcagcagtagggatg 502 |||||||| || |||||||| || |||||||| |||||||||||||||||||| |||||| Sbjct: 1411 tcagccaggacggtcaatgcgccaatgcatacaccaccaaatgcagcagcagtggggatg 1352 Query: 503 tatctgttcagttccttctgcaagtttgactcgcgatggcctggcataaccatttgttgt 562 |||| ||| ||||||||||||||||| ||||| |||||||||||||| |||||||||||| Sbjct: 1351 tatcggttaagttccttctgcaagttcgactcacgatggcctggcatcaccatttgttgt 1292 Query: 563 tccttcagctgcttagcgacatccttggctgatgaaccagagacttcaatccatgttttt 622 ||||| ||||||||||| |||||||| ||||||||||| || |||||||||||||| ||| Sbjct: 1291 tccttgagctgcttagcaacatcctttgctgatgaacccgaaacttcaatccatgtcttt 1232 Query: 623 gagaagagagcacatgctgacagcat 648 ||||| |||||||| ||||||||||| Sbjct: 1231 gagaacagagcacaggctgacagcat 1206
>gb|BT024137.1| Zea mays clone EL01N0446B05 mRNA sequence Length = 1756 Score = 361 bits (182), Expect = 2e-96 Identities = 290/326 (88%) Strand = Plus / Minus Query: 323 aatcagaacccaaagaaaccaagctcggtcgccctctccttctcgaaggtctcaaagtac 382 ||||| || ||||||||||||||||| |||||||| |||||||| ||||| || ||||| Sbjct: 1508 aatcaaaaaccaaagaaaccaagctcagtcgccctttccttctcaaaggtttcgaagtat 1449 Query: 383 tggtatatgatggtaacagccaacagaataccggttcctgaaccaattgcgcccatgaaa 442 ||||||||||| || ||||| | || ||||| |||||||||||||| || ||||||||| Sbjct: 1448 tggtatatgattgtcacagcgagcaatataccagttcctgaaccaatcgcacccatgaaa 1389 Query: 443 tcagccagaacagtcaatgcaccgatgcatactccaccaaatgcagcagcagtagggatg 502 |||||||| || |||||||| || |||||||| |||||||||||||||||||| |||||| Sbjct: 1388 tcagccaggacggtcaatgcgccaatgcatacaccaccaaatgcagcagcagtggggatg 1329 Query: 503 tatctgttcagttccttctgcaagtttgactcgcgatggcctggcataaccatttgttgt 562 |||| ||| ||||||||||||||||| ||||| |||||||||||||| |||||||||||| Sbjct: 1328 tatcggttaagttccttctgcaagttcgactcacgatggcctggcatcaccatttgttgt 1269 Query: 563 tccttcagctgcttagcgacatccttggctgatgaaccagagacttcaatccatgttttt 622 ||||| ||||||||||| |||||||| ||||||||||| || |||||||||||||| ||| Sbjct: 1268 tccttgagctgcttagcaacatcctttgctgatgaaccggaaacttcaatccatgtcttt 1209 Query: 623 gagaagagagcacatgctgacagcat 648 ||||| |||||||| ||||||||||| Sbjct: 1208 gagaacagagcacaggctgacagcat 1183
>gb|AY106354.1| Zea mays PCO109407 mRNA sequence Length = 1769 Score = 361 bits (182), Expect = 2e-96 Identities = 290/326 (88%) Strand = Plus / Minus Query: 323 aatcagaacccaaagaaaccaagctcggtcgccctctccttctcgaaggtctcaaagtac 382 ||||| || ||||||||||||||||| |||||||| |||||||| ||||| || ||||| Sbjct: 1530 aatcaaaaaccaaagaaaccaagctcagtcgccctttccttctcaaaggtttcgaagtat 1471 Query: 383 tggtatatgatggtaacagccaacagaataccggttcctgaaccaattgcgcccatgaaa 442 ||||||||||| || ||||| | || ||||| |||||||||||||| || ||||||||| Sbjct: 1470 tggtatatgattgtcacagcgagcaatataccagttcctgaaccaatcgcacccatgaaa 1411 Query: 443 tcagccagaacagtcaatgcaccgatgcatactccaccaaatgcagcagcagtagggatg 502 |||||||| || |||||||| || |||||||| |||||||||||||||||||| |||||| Sbjct: 1410 tcagccaggacggtcaatgcgccaatgcatacaccaccaaatgcagcagcagtggggatg 1351 Query: 503 tatctgttcagttccttctgcaagtttgactcgcgatggcctggcataaccatttgttgt 562 |||| ||| ||||||||||||||||| ||||| |||||||||||||| |||||||||||| Sbjct: 1350 tatcggttaagttccttctgcaagttcgactcacgatggcctggcatcaccatttgttgt 1291 Query: 563 tccttcagctgcttagcgacatccttggctgatgaaccagagacttcaatccatgttttt 622 ||||| ||||||||||| |||||||| ||||||||||| || |||||||||||||| ||| Sbjct: 1290 tccttgagctgcttagcaacatcctttgctgatgaaccggaaacttcaatccatgtcttt 1231 Query: 623 gagaagagagcacatgctgacagcat 648 ||||| |||||||| ||||||||||| Sbjct: 1230 gagaacagagcacaggctgacagcat 1205
>dbj|AK073633.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033048G12, full insert sequence Length = 1970 Score = 359 bits (181), Expect = 7e-96 Identities = 289/325 (88%) Strand = Plus / Minus Query: 324 atcagaacccaaagaaaccaagctcggtcgccctctccttctcgaaggtctcaaagtact 383 |||| |||||| ||||||| |||||||| ||||| || |||||||| |||||||| |||| Sbjct: 1576 atcaaaacccagagaaacctagctcggtagccctttctttctcgaatgtctcaaaatact 1517 Query: 384 ggtatatgatggtaacagccaacagaataccggttcctgaaccaattgcgcccatgaaat 443 |||| ||||| |||||||| | ||| || || ||||||||||||||||| |||||||||| Sbjct: 1516 ggtagatgattgtaacagcgagcagtatcccagttcctgaaccaattgcacccatgaaat 1457 Query: 444 cagccagaacagtcaatgcaccgatgcatactccaccaaatgcagcagcagtagggatgt 503 |||| || |||||||||||||| ||||| |||||||||||||||||||| |||||||||| Sbjct: 1456 cagctaggacagtcaatgcaccaatgcagactccaccaaatgcagcagctgtagggatgt 1397 Query: 504 atctgttcagttccttctgcaagtttgactcgcgatggcctggcataaccatttgttgtt 563 ||||||||| ||| ||||| || || ||||| |||||||||||||| ||||||||||| | Sbjct: 1396 atctgttcaattctttctgtaaattcgactcacgatggcctggcatcaccatttgttgct 1337 Query: 564 ccttcagctgcttagcgacatccttggctgatgaaccagagacttcaatccatgtttttg 623 |||| ||||| ||||| |||||||| |||||||||||||| |||||||||||||| |||| Sbjct: 1336 ccttgagctgtttagcaacatcctttgctgatgaaccagatacttcaatccatgtctttg 1277 Query: 624 agaagagagcacatgctgacagcat 648 ||||||||||||| ||||||||||| Sbjct: 1276 agaagagagcacaagctgacagcat 1252
>gb|AY044237.1| Hordeum vulgare Sec61 alpha subunit mRNA, complete cds Length = 1864 Score = 329 bits (166), Expect = 7e-87 Identities = 277/314 (88%) Strand = Plus / Minus Query: 335 aagaaaccaagctcggtcgccctctccttctcgaaggtctcaaagtactggtatatgatg 394 ||||||||||||||||||||||| ||||||||||| ||||| ||||| |||||||||||| Sbjct: 1539 aagaaaccaagctcggtcgccctttccttctcgaacgtctcgaagtattggtatatgatg 1480 Query: 395 gtaacagccaacagaataccggttcctgaaccaattgcgcccatgaaatcagccagaaca 454 || || || | ||| ||||||||||||||||| ||||| |||||||||||||| || ||| Sbjct: 1479 gtgaccgcaagcagtataccggttcctgaaccgattgcacccatgaaatcagctaggaca 1420 Query: 455 gtcaatgcaccgatgcatactccaccaaatgcagcagcagtagggatgtatctgttcagt 514 |||| || || ||||| ||||| |||| ||||||||| || |||||||||||||||| Sbjct: 1419 gtcagcgcgccaatgcagactcctccaattgcagcagcggtggggatgtatctgttcaac 1360 Query: 515 tccttctgcaagtttgactcgcgatggcctggcataaccatttgttgttccttcagctgc 574 ||| ||| |||||||||||| |||||||||||||| ||||||||||||||||| |||||| Sbjct: 1359 tccctctccaagtttgactcacgatggcctggcatcaccatttgttgttccttgagctgc 1300 Query: 575 ttagcgacatccttggctgatgaaccagagacttcaatccatgtttttgagaagagagca 634 |||| |||||| | |||||||||||||| |||||||||||||| |||||||||||||| Sbjct: 1299 ctagcaacatcccttgctgatgaaccagaaacttcaatccatgtctttgagaagagagcg 1240 Query: 635 catgctgacagcat 648 || ||||||||||| Sbjct: 1239 caagctgacagcat 1226
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 323 bits (163), Expect = 4e-85 Identities = 217/235 (92%) Strand = Plus / Plus Query: 332 ccaaagaaaccaagctcggtcgccctctccttctcgaaggtctcaaagtactggtatatg 391 |||||||||||||||||||| |||||||| |||||||| ||||| ||||||||||| ||| Sbjct: 10862983 ccaaagaaaccaagctcggttgccctctctttctcgaatgtctcgaagtactggtaaatg 10863042 Query: 392 atggtaacagccaacagaataccggttcctgaaccaattgcgcccatgaaatcagccaga 451 ||||||||||| | ||||||||| |||||||||||||| || |||||||||||||| ||| Sbjct: 10863043 atggtaacagcaagcagaataccagttcctgaaccaatcgcacccatgaaatcagctaga 10863102 Query: 452 acagtcaatgcaccgatgcatactccaccaaatgcagcagcagtagggatgtatctgttc 511 |||||||||||||| ||||| ||||||||||||||||||||||| ||||||||||||||| Sbjct: 10863103 acagtcaatgcaccaatgcacactccaccaaatgcagcagcagtggggatgtatctgttc 10863162 Query: 512 agttccttctgcaagtttgactcgcgatggcctggcataaccatttgttgttcct 566 | ||||||||||||||||||||| |||||||| ||||| |||||||||||||||| Sbjct: 10863163 aattccttctgcaagtttgactcacgatggccaggcatcaccatttgttgttcct 10863217 Score = 291 bits (147), Expect = 1e-75 Identities = 213/235 (90%) Strand = Plus / Plus Query: 332 ccaaagaaaccaagctcggtcgccctctccttctcgaaggtctcaaagtactggtatatg 391 ||||||||||||||||| || |||||||| |||||||| ||||| ||||||||||| ||| Sbjct: 10853368 ccaaagaaaccaagctcagttgccctctctttctcgaatgtctcgaagtactggtagatg 10853427 Query: 392 atggtaacagccaacagaataccggttcctgaaccaattgcgcccatgaaatcagccaga 451 || |||||||| | ||||||||| |||||||||||||| || |||||||||||||| ||| Sbjct: 10853428 atagtaacagcaagcagaataccagttcctgaaccaatagcacccatgaaatcagctaga 10853487 Query: 452 acagtcaatgcaccgatgcatactccaccaaatgcagcagcagtagggatgtatctgttc 511 |||||||||||||| ||||| ||||||||||||||||| ||||| ||||||||||||||| Sbjct: 10853488 acagtcaatgcaccaatgcacactccaccaaatgcagcggcagtggggatgtatctgttc 10853547 Query: 512 agttccttctgcaagtttgactcgcgatggcctggcataaccatttgttgttcct 566 | ||||||||||||||||||||| |||||||| ||||| |||||||| ||||||| Sbjct: 10853548 aattccttctgcaagtttgactcacgatggccaggcatcaccatttgctgttcct 10853602 Score = 212 bits (107), Expect = 1e-51 Identities = 203/234 (86%), Gaps = 7/234 (2%) Strand = Plus / Plus Query: 332 ccaaagaaaccaagctcggtcgccctctccttctcgaaggtctcaaagtac---tggtat 388 |||||||||||||||| || |||||||| ||||| ||||| |||||| ||||| Sbjct: 10874491 ccaaagaaaccaagcttagttgccctctc----tcgaatgtctcgaagtacagctggtag 10874546 Query: 389 atgatggtaacagccaacagaataccggttcctgaaccaattgcgcccatgaaatcagcc 448 |||||||||||||| | |||||| || |||||||||||||| || |||||||||||||| Sbjct: 10874547 atgatggtaacagcaagcagaatgccagttcctgaaccaatcgcacccatgaaatcagct 10874606 Query: 449 agaacagtcaatgcaccgatgcatactccaccaaatgcagcagcagtagggatgtatctg 508 ||||||||||||||||| ||||| ||||||||||||||||| ||||| | ||||| |||| Sbjct: 10874607 agaacagtcaatgcaccaatgcacactccaccaaatgcagcggcagtggagatgtgtctg 10874666 Query: 509 ttcagttccttctgcaagtttgactcgcgatggcctggcataaccatttgttgt 562 |||| ||||||||||||||||||||| | |||||| ||||| |||||||||||| Sbjct: 10874667 ttcaattccttctgcaagtttgactcacaatggccaggcatcaccatttgttgt 10874720 Score = 105 bits (53), Expect = 2e-19 Identities = 77/85 (90%) Strand = Plus / Plus Query: 564 ccttcagctgcttagcgacatccttggctgatgaaccagagacttcaatccatgtttttg 623 |||||||||| ||||| |||||||| || ||||| ||||| |||||||||||||| |||| Sbjct: 10854032 ccttcagctgtttagcaacatcctttgcagatgagccagatacttcaatccatgtctttg 10854091 Query: 624 agaagagagcacatgctgacagcat 648 ||||||||||||| ||||||||||| Sbjct: 10854092 agaagagagcacaagctgacagcat 10854116 Score = 97.6 bits (49), Expect = 4e-17 Identities = 76/85 (89%) Strand = Plus / Plus Query: 564 ccttcagctgcttagcgacatccttggctgatgaaccagagacttcaatccatgtttttg 623 |||||| ||| ||||| |||||||| || ||||| ||||| |||||||||||||| |||| Sbjct: 10863652 ccttcaactgtttagcaacatcctttgcagatgagccagatacttcaatccatgtctttg 10863711 Query: 624 agaagagagcacatgctgacagcat 648 ||||||||||||| ||||||||||| Sbjct: 10863712 agaagagagcacaagctgacagcat 10863736 Score = 50.1 bits (25), Expect = 0.009 Identities = 62/72 (86%), Gaps = 3/72 (4%) Strand = Plus / Plus Query: 194 aaataagtcgggcaacctaaacagaatttaa--tctccggttacaacca-aaacagccag 250 |||||||||||||||||||||| || ||||| ||||| ||||| ||| |||||||| | Sbjct: 10862850 aaataagtcgggcaacctaaactgactttaagctctccaattacatccataaacagccgg 10862909 Query: 251 ccaagcagtact 262 ||||| |||||| Sbjct: 10862910 ccaagaagtact 10862921 Score = 46.1 bits (23), Expect = 0.14 Identities = 47/55 (85%) Strand = Plus / Plus Query: 564 ccttcagctgcttagcgacatccttggctgatgaaccagagacttcaatccatgt 618 |||||| ||| ||| | |||||||| || ||||| ||||| |||||||||||||| Sbjct: 10876056 ccttcaactgtttaacaacatcctttgcagatgagccagaaacttcaatccatgt 10876110
>dbj|AP005313.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0512H04 Length = 151049 Score = 323 bits (163), Expect = 4e-85 Identities = 217/235 (92%) Strand = Plus / Plus Query: 332 ccaaagaaaccaagctcggtcgccctctccttctcgaaggtctcaaagtactggtatatg 391 |||||||||||||||||||| |||||||| |||||||| ||||| ||||||||||| ||| Sbjct: 86706 ccaaagaaaccaagctcggttgccctctctttctcgaatgtctcgaagtactggtaaatg 86765 Query: 392 atggtaacagccaacagaataccggttcctgaaccaattgcgcccatgaaatcagccaga 451 ||||||||||| | ||||||||| |||||||||||||| || |||||||||||||| ||| Sbjct: 86766 atggtaacagcaagcagaataccagttcctgaaccaatcgcacccatgaaatcagctaga 86825 Query: 452 acagtcaatgcaccgatgcatactccaccaaatgcagcagcagtagggatgtatctgttc 511 |||||||||||||| ||||| ||||||||||||||||||||||| ||||||||||||||| Sbjct: 86826 acagtcaatgcaccaatgcacactccaccaaatgcagcagcagtggggatgtatctgttc 86885 Query: 512 agttccttctgcaagtttgactcgcgatggcctggcataaccatttgttgttcct 566 | ||||||||||||||||||||| |||||||| ||||| |||||||||||||||| Sbjct: 86886 aattccttctgcaagtttgactcacgatggccaggcatcaccatttgttgttcct 86940 Score = 291 bits (147), Expect = 1e-75 Identities = 213/235 (90%) Strand = Plus / Plus Query: 332 ccaaagaaaccaagctcggtcgccctctccttctcgaaggtctcaaagtactggtatatg 391 ||||||||||||||||| || |||||||| |||||||| ||||| ||||||||||| ||| Sbjct: 77091 ccaaagaaaccaagctcagttgccctctctttctcgaatgtctcgaagtactggtagatg 77150 Query: 392 atggtaacagccaacagaataccggttcctgaaccaattgcgcccatgaaatcagccaga 451 || |||||||| | ||||||||| |||||||||||||| || |||||||||||||| ||| Sbjct: 77151 atagtaacagcaagcagaataccagttcctgaaccaatagcacccatgaaatcagctaga 77210 Query: 452 acagtcaatgcaccgatgcatactccaccaaatgcagcagcagtagggatgtatctgttc 511 |||||||||||||| ||||| ||||||||||||||||| ||||| ||||||||||||||| Sbjct: 77211 acagtcaatgcaccaatgcacactccaccaaatgcagcggcagtggggatgtatctgttc 77270 Query: 512 agttccttctgcaagtttgactcgcgatggcctggcataaccatttgttgttcct 566 | ||||||||||||||||||||| |||||||| ||||| |||||||| ||||||| Sbjct: 77271 aattccttctgcaagtttgactcacgatggccaggcatcaccatttgctgttcct 77325 Score = 212 bits (107), Expect = 1e-51 Identities = 203/234 (86%), Gaps = 7/234 (2%) Strand = Plus / Plus Query: 332 ccaaagaaaccaagctcggtcgccctctccttctcgaaggtctcaaagtac---tggtat 388 |||||||||||||||| || |||||||| ||||| ||||| |||||| ||||| Sbjct: 98214 ccaaagaaaccaagcttagttgccctctc----tcgaatgtctcgaagtacagctggtag 98269 Query: 389 atgatggtaacagccaacagaataccggttcctgaaccaattgcgcccatgaaatcagcc 448 |||||||||||||| | |||||| || |||||||||||||| || |||||||||||||| Sbjct: 98270 atgatggtaacagcaagcagaatgccagttcctgaaccaatcgcacccatgaaatcagct 98329 Query: 449 agaacagtcaatgcaccgatgcatactccaccaaatgcagcagcagtagggatgtatctg 508 ||||||||||||||||| ||||| ||||||||||||||||| ||||| | ||||| |||| Sbjct: 98330 agaacagtcaatgcaccaatgcacactccaccaaatgcagcggcagtggagatgtgtctg 98389 Query: 509 ttcagttccttctgcaagtttgactcgcgatggcctggcataaccatttgttgt 562 |||| ||||||||||||||||||||| | |||||| ||||| |||||||||||| Sbjct: 98390 ttcaattccttctgcaagtttgactcacaatggccaggcatcaccatttgttgt 98443 Score = 105 bits (53), Expect = 2e-19 Identities = 77/85 (90%) Strand = Plus / Plus Query: 564 ccttcagctgcttagcgacatccttggctgatgaaccagagacttcaatccatgtttttg 623 |||||||||| ||||| |||||||| || ||||| ||||| |||||||||||||| |||| Sbjct: 77755 ccttcagctgtttagcaacatcctttgcagatgagccagatacttcaatccatgtctttg 77814 Query: 624 agaagagagcacatgctgacagcat 648 ||||||||||||| ||||||||||| Sbjct: 77815 agaagagagcacaagctgacagcat 77839 Score = 97.6 bits (49), Expect = 4e-17 Identities = 76/85 (89%) Strand = Plus / Plus Query: 564 ccttcagctgcttagcgacatccttggctgatgaaccagagacttcaatccatgtttttg 623 |||||| ||| ||||| |||||||| || ||||| ||||| |||||||||||||| |||| Sbjct: 87375 ccttcaactgtttagcaacatcctttgcagatgagccagatacttcaatccatgtctttg 87434 Query: 624 agaagagagcacatgctgacagcat 648 ||||||||||||| ||||||||||| Sbjct: 87435 agaagagagcacaagctgacagcat 87459 Score = 50.1 bits (25), Expect = 0.009 Identities = 62/72 (86%), Gaps = 3/72 (4%) Strand = Plus / Plus Query: 194 aaataagtcgggcaacctaaacagaatttaa--tctccggttacaacca-aaacagccag 250 |||||||||||||||||||||| || ||||| ||||| ||||| ||| |||||||| | Sbjct: 86573 aaataagtcgggcaacctaaactgactttaagctctccaattacatccataaacagccgg 86632 Query: 251 ccaagcagtact 262 ||||| |||||| Sbjct: 86633 ccaagaagtact 86644 Score = 46.1 bits (23), Expect = 0.14 Identities = 47/55 (85%) Strand = Plus / Plus Query: 564 ccttcagctgcttagcgacatccttggctgatgaaccagagacttcaatccatgt 618 |||||| ||| ||| | |||||||| || ||||| ||||| |||||||||||||| Sbjct: 99779 ccttcaactgtttaacaacatcctttgcagatgagccagaaacttcaatccatgt 99833
>dbj|AP005400.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0698G06 Length = 138282 Score = 323 bits (163), Expect = 4e-85 Identities = 217/235 (92%) Strand = Plus / Plus Query: 332 ccaaagaaaccaagctcggtcgccctctccttctcgaaggtctcaaagtactggtatatg 391 |||||||||||||||||||| |||||||| |||||||| ||||| ||||||||||| ||| Sbjct: 2688 ccaaagaaaccaagctcggttgccctctctttctcgaatgtctcgaagtactggtaaatg 2747 Query: 392 atggtaacagccaacagaataccggttcctgaaccaattgcgcccatgaaatcagccaga 451 ||||||||||| | ||||||||| |||||||||||||| || |||||||||||||| ||| Sbjct: 2748 atggtaacagcaagcagaataccagttcctgaaccaatcgcacccatgaaatcagctaga 2807 Query: 452 acagtcaatgcaccgatgcatactccaccaaatgcagcagcagtagggatgtatctgttc 511 |||||||||||||| ||||| ||||||||||||||||||||||| ||||||||||||||| Sbjct: 2808 acagtcaatgcaccaatgcacactccaccaaatgcagcagcagtggggatgtatctgttc 2867 Query: 512 agttccttctgcaagtttgactcgcgatggcctggcataaccatttgttgttcct 566 | ||||||||||||||||||||| |||||||| ||||| |||||||||||||||| Sbjct: 2868 aattccttctgcaagtttgactcacgatggccaggcatcaccatttgttgttcct 2922 Score = 212 bits (107), Expect = 1e-51 Identities = 203/234 (86%), Gaps = 7/234 (2%) Strand = Plus / Plus Query: 332 ccaaagaaaccaagctcggtcgccctctccttctcgaaggtctcaaagtac---tggtat 388 |||||||||||||||| || |||||||| ||||| ||||| |||||| ||||| Sbjct: 14196 ccaaagaaaccaagcttagttgccctctc----tcgaatgtctcgaagtacagctggtag 14251 Query: 389 atgatggtaacagccaacagaataccggttcctgaaccaattgcgcccatgaaatcagcc 448 |||||||||||||| | |||||| || |||||||||||||| || |||||||||||||| Sbjct: 14252 atgatggtaacagcaagcagaatgccagttcctgaaccaatcgcacccatgaaatcagct 14311 Query: 449 agaacagtcaatgcaccgatgcatactccaccaaatgcagcagcagtagggatgtatctg 508 ||||||||||||||||| ||||| ||||||||||||||||| ||||| | ||||| |||| Sbjct: 14312 agaacagtcaatgcaccaatgcacactccaccaaatgcagcggcagtggagatgtgtctg 14371 Query: 509 ttcagttccttctgcaagtttgactcgcgatggcctggcataaccatttgttgt 562 |||| ||||||||||||||||||||| | |||||| ||||| |||||||||||| Sbjct: 14372 ttcaattccttctgcaagtttgactcacaatggccaggcatcaccatttgttgt 14425 Score = 97.6 bits (49), Expect = 4e-17 Identities = 76/85 (89%) Strand = Plus / Plus Query: 564 ccttcagctgcttagcgacatccttggctgatgaaccagagacttcaatccatgtttttg 623 |||||| ||| ||||| |||||||| || ||||| ||||| |||||||||||||| |||| Sbjct: 3357 ccttcaactgtttagcaacatcctttgcagatgagccagatacttcaatccatgtctttg 3416 Query: 624 agaagagagcacatgctgacagcat 648 ||||||||||||| ||||||||||| Sbjct: 3417 agaagagagcacaagctgacagcat 3441 Score = 50.1 bits (25), Expect = 0.009 Identities = 62/72 (86%), Gaps = 3/72 (4%) Strand = Plus / Plus Query: 194 aaataagtcgggcaacctaaacagaatttaa--tctccggttacaacca-aaacagccag 250 |||||||||||||||||||||| || ||||| ||||| ||||| ||| |||||||| | Sbjct: 2555 aaataagtcgggcaacctaaactgactttaagctctccaattacatccataaacagccgg 2614 Query: 251 ccaagcagtact 262 ||||| |||||| Sbjct: 2615 ccaagaagtact 2626 Score = 46.1 bits (23), Expect = 0.14 Identities = 47/55 (85%) Strand = Plus / Plus Query: 564 ccttcagctgcttagcgacatccttggctgatgaaccagagacttcaatccatgt 618 |||||| ||| ||| | |||||||| || ||||| ||||| |||||||||||||| Sbjct: 15761 ccttcaactgtttaacaacatcctttgcagatgagccagaaacttcaatccatgt 15815
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 260 bits (131), Expect = 5e-66 Identities = 215/243 (88%) Strand = Plus / Minus Query: 324 atcagaacccaaagaaaccaagctcggtcgccctctccttctcgaaggtctcaaagtact 383 |||| |||||||||||||| |||||||| ||||| || |||||||| |||||||| |||| Sbjct: 5867409 atcaaaacccaaagaaacctagctcggtagccctttctttctcgaatgtctcaaaatact 5867350 Query: 384 ggtatatgatggtaacagccaacagaataccggttcctgaaccaattgcgcccatgaaat 443 |||| ||||| |||||||| | ||| || || ||||||||||||||||| |||||||||| Sbjct: 5867349 ggtagatgattgtaacagcgagcagtatcccagttcctgaaccaattgcacccatgaaat 5867290 Query: 444 cagccagaacagtcaatgcaccgatgcatactccaccaaatgcagcagcagtagggatgt 503 |||| || |||||||||||||| ||||| |||||||||||||||||||| |||||||||| Sbjct: 5867289 cagctaggacagtcaatgcaccaatgcagactccaccaaatgcagcagctgtagggatgt 5867230 Query: 504 atctgttcagttccttctgcaagtttgactcgcgatggcctggcataaccatttgttgtt 563 ||||||||| ||| ||||| || || ||||| |||||||||||||| ||||||||||| | Sbjct: 5867229 atctgttcaattctttctgtaaattcgactcacgatggcctggcatcaccatttgttgct 5867170 Query: 564 cct 566 ||| Sbjct: 5867169 cct 5867167 Score = 113 bits (57), Expect = 7e-22 Identities = 78/85 (91%) Strand = Plus / Minus Query: 564 ccttcagctgcttagcgacatccttggctgatgaaccagagacttcaatccatgtttttg 623 |||| ||||| ||||| |||||||| |||||||||||||| |||||||||||||| |||| Sbjct: 5867073 ccttgagctgtttagcaacatcctttgctgatgaaccagatacttcaatccatgtctttg 5867014 Query: 624 agaagagagcacatgctgacagcat 648 ||||||||||||| ||||||||||| Sbjct: 5867013 agaagagagcacaagctgacagcat 5866989
>gb|AC146619.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNAa0021B21, from chromosome 3, complete sequence Length = 139208 Score = 260 bits (131), Expect = 5e-66 Identities = 215/243 (88%) Strand = Plus / Minus Query: 324 atcagaacccaaagaaaccaagctcggtcgccctctccttctcgaaggtctcaaagtact 383 |||| |||||||||||||| |||||||| ||||| || |||||||| |||||||| |||| Sbjct: 96239 atcaaaacccaaagaaacctagctcggtagccctttctttctcgaatgtctcaaaatact 96180 Query: 384 ggtatatgatggtaacagccaacagaataccggttcctgaaccaattgcgcccatgaaat 443 |||| ||||| |||||||| | ||| || || ||||||||||||||||| |||||||||| Sbjct: 96179 ggtagatgattgtaacagcgagcagtatcccagttcctgaaccaattgcacccatgaaat 96120 Query: 444 cagccagaacagtcaatgcaccgatgcatactccaccaaatgcagcagcagtagggatgt 503 |||| || |||||||||||||| ||||| |||||||||||||||||||| |||||||||| Sbjct: 96119 cagctaggacagtcaatgcaccaatgcagactccaccaaatgcagcagctgtagggatgt 96060 Query: 504 atctgttcagttccttctgcaagtttgactcgcgatggcctggcataaccatttgttgtt 563 ||||||||| ||| ||||| || || ||||| |||||||||||||| ||||||||||| | Sbjct: 96059 atctgttcaattctttctgtaaattcgactcacgatggcctggcatcaccatttgttgct 96000 Query: 564 cct 566 ||| Sbjct: 95999 cct 95997 Score = 113 bits (57), Expect = 7e-22 Identities = 78/85 (91%) Strand = Plus / Minus Query: 564 ccttcagctgcttagcgacatccttggctgatgaaccagagacttcaatccatgtttttg 623 |||| ||||| ||||| |||||||| |||||||||||||| |||||||||||||| |||| Sbjct: 95903 ccttgagctgtttagcaacatcctttgctgatgaaccagatacttcaatccatgtctttg 95844 Query: 624 agaagagagcacatgctgacagcat 648 ||||||||||||| ||||||||||| Sbjct: 95843 agaagagagcacaagctgacagcat 95819
>gb|AC134241.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0085F02, complete sequence Length = 128535 Score = 260 bits (131), Expect = 5e-66 Identities = 215/243 (88%) Strand = Plus / Minus Query: 324 atcagaacccaaagaaaccaagctcggtcgccctctccttctcgaaggtctcaaagtact 383 |||| |||||||||||||| |||||||| ||||| || |||||||| |||||||| |||| Sbjct: 17031 atcaaaacccaaagaaacctagctcggtagccctttctttctcgaatgtctcaaaatact 16972 Query: 384 ggtatatgatggtaacagccaacagaataccggttcctgaaccaattgcgcccatgaaat 443 |||| ||||| |||||||| | ||| || || ||||||||||||||||| |||||||||| Sbjct: 16971 ggtagatgattgtaacagcgagcagtatcccagttcctgaaccaattgcacccatgaaat 16912 Query: 444 cagccagaacagtcaatgcaccgatgcatactccaccaaatgcagcagcagtagggatgt 503 |||| || |||||||||||||| ||||| |||||||||||||||||||| |||||||||| Sbjct: 16911 cagctaggacagtcaatgcaccaatgcagactccaccaaatgcagcagctgtagggatgt 16852 Query: 504 atctgttcagttccttctgcaagtttgactcgcgatggcctggcataaccatttgttgtt 563 ||||||||| ||| ||||| || || ||||| |||||||||||||| ||||||||||| | Sbjct: 16851 atctgttcaattctttctgtaaattcgactcacgatggcctggcatcaccatttgttgct 16792 Query: 564 cct 566 ||| Sbjct: 16791 cct 16789 Score = 113 bits (57), Expect = 7e-22 Identities = 78/85 (91%) Strand = Plus / Minus Query: 564 ccttcagctgcttagcgacatccttggctgatgaaccagagacttcaatccatgtttttg 623 |||| ||||| ||||| |||||||| |||||||||||||| |||||||||||||| |||| Sbjct: 16695 ccttgagctgtttagcaacatcctttgctgatgaaccagatacttcaatccatgtctttg 16636 Query: 624 agaagagagcacatgctgacagcat 648 ||||||||||||| ||||||||||| Sbjct: 16635 agaagagagcacaagctgacagcat 16611
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 260 bits (131), Expect = 5e-66 Identities = 215/243 (88%) Strand = Plus / Minus Query: 324 atcagaacccaaagaaaccaagctcggtcgccctctccttctcgaaggtctcaaagtact 383 |||| |||||||||||||| |||||||| ||||| || |||||||| |||||||| |||| Sbjct: 5866622 atcaaaacccaaagaaacctagctcggtagccctttctttctcgaatgtctcaaaatact 5866563 Query: 384 ggtatatgatggtaacagccaacagaataccggttcctgaaccaattgcgcccatgaaat 443 |||| ||||| |||||||| | ||| || || ||||||||||||||||| |||||||||| Sbjct: 5866562 ggtagatgattgtaacagcgagcagtatcccagttcctgaaccaattgcacccatgaaat 5866503 Query: 444 cagccagaacagtcaatgcaccgatgcatactccaccaaatgcagcagcagtagggatgt 503 |||| || |||||||||||||| ||||| |||||||||||||||||||| |||||||||| Sbjct: 5866502 cagctaggacagtcaatgcaccaatgcagactccaccaaatgcagcagctgtagggatgt 5866443 Query: 504 atctgttcagttccttctgcaagtttgactcgcgatggcctggcataaccatttgttgtt 563 ||||||||| ||| ||||| || || ||||| |||||||||||||| ||||||||||| | Sbjct: 5866442 atctgttcaattctttctgtaaattcgactcacgatggcctggcatcaccatttgttgct 5866383 Query: 564 cct 566 ||| Sbjct: 5866382 cct 5866380 Score = 113 bits (57), Expect = 7e-22 Identities = 78/85 (91%) Strand = Plus / Minus Query: 564 ccttcagctgcttagcgacatccttggctgatgaaccagagacttcaatccatgtttttg 623 |||| ||||| ||||| |||||||| |||||||||||||| |||||||||||||| |||| Sbjct: 5866286 ccttgagctgtttagcaacatcctttgctgatgaaccagatacttcaatccatgtctttg 5866227 Query: 624 agaagagagcacatgctgacagcat 648 ||||||||||||| ||||||||||| Sbjct: 5866226 agaagagagcacaagctgacagcat 5866202
>ref|NM_001036399.1| Arabidopsis thaliana protein translocase AT2G34250 transcript variant AT2G34250.2 mRNA, complete cds Length = 1961 Score = 234 bits (118), Expect = 3e-58 Identities = 238/278 (85%) Strand = Plus / Minus Query: 359 tccttctcgaaggtctcaaagtactggtatatgatggtaacagccaacagaataccggtt 418 |||||||| |||||||| || |||||||||||||| || || ||||||||||| |||||| Sbjct: 1631 tccttctcaaaggtctcgaaatactggtatatgatcgtgaccgccaacagaattccggtt 1572 Query: 419 cctgaaccaattgcgcccatgaaatcagccagaacagtcaatgcaccgatgcatactcca 478 || || || || || |||||||||||||||| ||| || | ||||||||| || ||||| Sbjct: 1571 cccgacccgatggctcccatgaaatcagccaaaacggtaagtgcaccgatacaaactcct 1512 Query: 479 ccaaatgcagcagcagtagggatgtatctgttcagttccttctgcaagtttgactcgcga 538 ||||| || || || || |||||||||||||||||||||||||| |||||||| || | Sbjct: 1511 ccaaaagctgctgctgttgggatgtatctgttcagttccttctgtaagtttgattctctg 1452 Query: 539 tggcctggcataaccatttgttgttccttcagctgcttagcgacatccttggctgatgaa 598 || |||||||| ||||||||||||||||| ||||||||||| |||||| | || || || Sbjct: 1451 tgtcctggcatcaccatttgttgttcctttagctgcttagctacatccctagcagaagat 1392 Query: 599 ccagagacttcaatccatgtttttgagaagagagcaca 636 |||||||||||||||||||| |||||||| |||||||| Sbjct: 1391 ccagagacttcaatccatgtctttgagaaaagagcaca 1354
>ref|NM_128976.2| Arabidopsis thaliana protein translocase AT2G34250 transcript variant AT2G34250.1 mRNA, complete cds Length = 1882 Score = 234 bits (118), Expect = 3e-58 Identities = 238/278 (85%) Strand = Plus / Minus Query: 359 tccttctcgaaggtctcaaagtactggtatatgatggtaacagccaacagaataccggtt 418 |||||||| |||||||| || |||||||||||||| || || ||||||||||| |||||| Sbjct: 1558 tccttctcaaaggtctcgaaatactggtatatgatcgtgaccgccaacagaattccggtt 1499 Query: 419 cctgaaccaattgcgcccatgaaatcagccagaacagtcaatgcaccgatgcatactcca 478 || || || || || |||||||||||||||| ||| || | ||||||||| || ||||| Sbjct: 1498 cccgacccgatggctcccatgaaatcagccaaaacggtaagtgcaccgatacaaactcct 1439 Query: 479 ccaaatgcagcagcagtagggatgtatctgttcagttccttctgcaagtttgactcgcga 538 ||||| || || || || |||||||||||||||||||||||||| |||||||| || | Sbjct: 1438 ccaaaagctgctgctgttgggatgtatctgttcagttccttctgtaagtttgattctctg 1379 Query: 539 tggcctggcataaccatttgttgttccttcagctgcttagcgacatccttggctgatgaa 598 || |||||||| ||||||||||||||||| ||||||||||| |||||| | || || || Sbjct: 1378 tgtcctggcatcaccatttgttgttcctttagctgcttagctacatccctagcagaagat 1319 Query: 599 ccagagacttcaatccatgtttttgagaagagagcaca 636 |||||||||||||||||||| |||||||| |||||||| Sbjct: 1318 ccagagacttcaatccatgtctttgagaaaagagcaca 1281
>gb|BT000507.1| Arabidopsis thaliana endoplasmic reticulum insertion protein (At2g34250/F13P17.9) mRNA, complete cds Length = 1428 Score = 234 bits (118), Expect = 3e-58 Identities = 238/278 (85%) Strand = Plus / Minus Query: 359 tccttctcgaaggtctcaaagtactggtatatgatggtaacagccaacagaataccggtt 418 |||||||| |||||||| || |||||||||||||| || || ||||||||||| |||||| Sbjct: 1394 tccttctcaaaggtctcgaaatactggtatatgatcgtgaccgccaacagaattccggtt 1335 Query: 419 cctgaaccaattgcgcccatgaaatcagccagaacagtcaatgcaccgatgcatactcca 478 || || || || || |||||||||||||||| ||| || | ||||||||| || ||||| Sbjct: 1334 cccgacccgatggctcccatgaaatcagccaaaacggtaagtgcaccgatacaaactcct 1275 Query: 479 ccaaatgcagcagcagtagggatgtatctgttcagttccttctgcaagtttgactcgcga 538 ||||| || || || || |||||||||||||||||||||||||| |||||||| || | Sbjct: 1274 ccaaaagctgctgctgttgggatgtatctgttcagttccttctgtaagtttgattctctg 1215 Query: 539 tggcctggcataaccatttgttgttccttcagctgcttagcgacatccttggctgatgaa 598 || |||||||| ||||||||||||||||| ||||||||||| |||||| | || || || Sbjct: 1214 tgtcctggcatcaccatttgttgttcctttagctgcttagctacatccctagcagaagat 1155 Query: 599 ccagagacttcaatccatgtttttgagaagagagcaca 636 |||||||||||||||||||| |||||||| |||||||| Sbjct: 1154 ccagagacttcaatccatgtctttgagaaaagagcaca 1117
>gb|AF367298.1| Arabidopsis thaliana At2g34250/F13P17.9 mRNA, complete cds Length = 1804 Score = 234 bits (118), Expect = 3e-58 Identities = 238/278 (85%) Strand = Plus / Minus Query: 359 tccttctcgaaggtctcaaagtactggtatatgatggtaacagccaacagaataccggtt 418 |||||||| |||||||| || |||||||||||||| || || ||||||||||| |||||| Sbjct: 1532 tccttctcaaaggtctcgaaatactggtatatgatcgtgaccgccaacagaattccggtt 1473 Query: 419 cctgaaccaattgcgcccatgaaatcagccagaacagtcaatgcaccgatgcatactcca 478 || || || || || |||||||||||||||| ||| || | ||||||||| || ||||| Sbjct: 1472 cccgacccgatggctcccatgaaatcagccaaaacggtaagtgcaccgatacaaactcct 1413 Query: 479 ccaaatgcagcagcagtagggatgtatctgttcagttccttctgcaagtttgactcgcga 538 ||||| || || || || |||||||||||||||||||||||||| |||||||| || | Sbjct: 1412 ccaaaagctgctgctgttgggatgtatctgttcagttccttctgtaagtttgattctctg 1353 Query: 539 tggcctggcataaccatttgttgttccttcagctgcttagcgacatccttggctgatgaa 598 || |||||||| ||||||||||||||||| ||||||||||| |||||| | || || || Sbjct: 1352 tgtcctggcatcaccatttgttgttcctttagctgcttagctacatccctagcagaagat 1293 Query: 599 ccagagacttcaatccatgtttttgagaagagagcaca 636 |||||||||||||||||||| |||||||| |||||||| Sbjct: 1292 ccagagacttcaatccatgtctttgagaaaagagcaca 1255
>emb|BX821829.1|CNS0A807 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL78ZE02 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1831 Score = 234 bits (118), Expect = 3e-58 Identities = 238/278 (85%) Strand = Plus / Minus Query: 359 tccttctcgaaggtctcaaagtactggtatatgatggtaacagccaacagaataccggtt 418 |||||||| |||||||| || |||||||||||||| || || ||||||||||| |||||| Sbjct: 1542 tccttctcaaaggtctcgaaatactggtatatgatcgtgaccgccaacagaattccggtt 1483 Query: 419 cctgaaccaattgcgcccatgaaatcagccagaacagtcaatgcaccgatgcatactcca 478 || || || || || |||||||||||||||| ||| || | ||||||||| || ||||| Sbjct: 1482 cccgacccgatggctcccatgaaatcagccaaaacggtaagtgcaccgatacaaactcct 1423 Query: 479 ccaaatgcagcagcagtagggatgtatctgttcagttccttctgcaagtttgactcgcga 538 ||||| || || || || |||||||||||||||||||||||||| |||||||| || | Sbjct: 1422 ccaaaagctgctgctgttgggatgtatctgttcagttccttctgtaagtttgattctctg 1363 Query: 539 tggcctggcataaccatttgttgttccttcagctgcttagcgacatccttggctgatgaa 598 || |||||||| ||||||||||||||||| ||||||||||| |||||| | || || || Sbjct: 1362 tgtcctggcatcaccatttgttgttcctttagctgcttagctacatccctagcagaagat 1303 Query: 599 ccagagacttcaatccatgtttttgagaagagagcaca 636 |||||||||||||||||||| |||||||| |||||||| Sbjct: 1302 ccagagacttcaatccatgtctttgagaaaagagcaca 1265
>gb|AY088235.1| Arabidopsis thaliana clone 4598 mRNA, complete sequence Length = 1821 Score = 234 bits (118), Expect = 3e-58 Identities = 238/278 (85%) Strand = Plus / Minus Query: 359 tccttctcgaaggtctcaaagtactggtatatgatggtaacagccaacagaataccggtt 418 |||||||| |||||||| || |||||||||||||| || || ||||||||||| |||||| Sbjct: 1558 tccttctcaaaggtctcgaaatactggtatatgatcgtgaccgccaacagaattccggtt 1499 Query: 419 cctgaaccaattgcgcccatgaaatcagccagaacagtcaatgcaccgatgcatactcca 478 || || || || || |||||||||||||||| ||| || | ||||||||| || ||||| Sbjct: 1498 cccgacccgatggctcccatgaaatcagccaaaacggtaagtgcaccgatacaaactcct 1439 Query: 479 ccaaatgcagcagcagtagggatgtatctgttcagttccttctgcaagtttgactcgcga 538 ||||| || || || || |||||||||||||||||||||||||| |||||||| || | Sbjct: 1438 ccaaaagctgctgctgttgggatgtatctgttcagttccttctgtaagtttgattctctg 1379 Query: 539 tggcctggcataaccatttgttgttccttcagctgcttagcgacatccttggctgatgaa 598 || |||||||| ||||||||||||||||| ||||||||||| |||||| | || || || Sbjct: 1378 tgtcctggcatcaccatttgttgttcctttagctgcttagctacatccctagcagaagat 1319 Query: 599 ccagagacttcaatccatgtttttgagaagagagcaca 636 |||||||||||||||||||| |||||||| |||||||| Sbjct: 1318 ccagagacttcaatccatgtctttgagaaaagagcaca 1281
>emb|BX820660.1|CNS0A8Q9 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH57ZF07 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 567 Score = 198 bits (100), Expect = 2e-47 Identities = 214/252 (84%) Strand = Plus / Minus Query: 359 tccttctcgaaggtctcaaagtactggtatatgatggtaacagccaacagaataccggtt 418 |||||||| |||||||| || |||||||||||||| || || ||||||||||| |||||| Sbjct: 252 tccttctcaaaggtctcgaaatactggtatatgatcgtgaccgccaacagaattccggtt 193 Query: 419 cctgaaccaattgcgcccatgaaatcagccagaacagtcaatgcaccgatgcatactcca 478 || || || || || |||||||||||||||| ||| || | ||||||||| || ||||| Sbjct: 192 cccgacccgatggctcccatgaaatcagccaaaacggtaagtgcaccgatacaaactcct 133 Query: 479 ccaaatgcagcagcagtagggatgtatctgttcagttccttctgcaagtttgactcgcga 538 ||||| || || || || |||||||||||||||||||||||||| |||||||| || | Sbjct: 132 ccaaaagctgctgctgttgggatgtatctgttcagttccttctgtaagtttgattctctg 73 Query: 539 tggcctggcataaccatttgttgttccttcagctgcttagcgacatccttggctgatgaa 598 || |||||||| ||||||||||||||||| ||||||||||| |||||| | || || || Sbjct: 72 tgtcctggcatcaccatttgttgttcctttagctgcttagctacatccctagcagaagat 13 Query: 599 ccagagacttca 610 |||||||||||| Sbjct: 12 ccagagacttca 1
>gb|AF190652.1|AF190652 Phaseolus vulgaris putative integral membrane protein (sec61) mRNA, sec61-1 allele, complete cds Length = 2150 Score = 194 bits (98), Expect = 3e-46 Identities = 266/322 (82%) Strand = Plus / Minus Query: 323 aatcagaacccaaagaaaccaagctcggtcgccctctccttctcgaaggtctcaaagtac 382 |||||||| |||||||| |||||||| | || ||||||||||| || ||||| |||||| Sbjct: 1478 aatcagaaaccaaagaagccaagctcactagctctctccttctcaaatgtctcgaagtac 1419 Query: 383 tggtatatgatggtaacagccaacagaataccggttcctgaaccaattgcgcccatgaaa 442 || |||||||| || || || | || || || || |||||||| ||||| ||||||||| Sbjct: 1418 tgatatatgattgttactgcaagcaatattccagtccctgaaccgattgcccccatgaaa 1359 Query: 443 tcagccagaacagtcaatgcaccgatgcatactccaccaaatgcagcagcagtagggatg 502 || |||| ||||||| ||||| || || | || |||||||| |||||||| || ||| Sbjct: 1358 tctgccaacacagtcagagcaccaatacaaatgcctccaaatgctgcagcagtgggaatg 1299 Query: 503 tatctgttcagttccttctgcaagtttgactcgcgatggcctggcataaccatttgttgt 562 |||| ||||| ||| ||||||| ||||||||| ||||| || ||||| ||||||||||| Sbjct: 1298 tatcggttcaattctttctgcaggtttgactcccgatgtccaggcattaccatttgttgc 1239 Query: 563 tccttcagctgcttagcgacatccttggctgatgaaccagagacttcaatccatgttttt 622 ||||||||||| || || ||||| || || ||||||||||||||||||||||| ||||| Sbjct: 1238 tccttcagctgttttgcaacatctttagcagatgaaccagagacttcaatccaagtttta 1179 Query: 623 gagaagagagcacatgctgaca 644 ||||| | ||||||||||||| Sbjct: 1178 gagaacaaggcacatgctgaca 1157
>ref|NM_102671.2| Arabidopsis thaliana protein translocase AT1G29310 mRNA, complete cds Length = 1688 Score = 172 bits (87), Expect = 9e-40 Identities = 258/315 (81%) Strand = Plus / Minus Query: 322 caatcagaacccaaagaaaccaagctcggtcgccctctccttctcgaaggtctcaaagta 381 ||||||||| |||||||||||||||||| | || | |||||||| ||||| ||||| || Sbjct: 1527 caatcagaatccaaagaaaccaagctcgctggctttttccttctcaaaggtttcaaaata 1468 Query: 382 ctggtatatgatggtaacagccaacagaataccggttcctgaaccaattgcgcccatgaa 441 ||| |||||||| || || || | | || || || || || ||||| || |||||||| Sbjct: 1467 ctgatatatgattgtgactgcaagtaagattccagtccccgacccaatggctcccatgaa 1408 Query: 442 atcagccagaacagtcaatgcaccgatgcatactccaccaaatgcagcagcagtagggat 501 |||||||| |||||| | ||||||||||| ||||| ||||||||||| || || ||||| Sbjct: 1407 atcagccaaaacagtgagcgcaccgatgcacactcctccaaatgcagccgctgttgggat 1348 Query: 502 gtatctgttcagttccttctgcaagtttgactcgcgatggcctggcataaccatttgttg 561 ||| | |||||| ||||| || ||||| ||||| | || || ||||| ||||||||||| Sbjct: 1347 gtaccggttcagctccttttgtaagttggactctctgtgtcccggcatcaccatttgttg 1288 Query: 562 ttccttcagctgcttagcgacatccttggctgatgaaccagagacttcaatccatgtttt 621 |||||| ||||||||||| ||||| | || || || || |||||||||||||||||||| Sbjct: 1287 ttcctttagctgcttagctacatctctagcagaagacccggagacttcaatccatgtttt 1228 Query: 622 tgagaagagagcaca 636 |||||| || ||||| Sbjct: 1227 tgagaatagggcaca 1213
>gb|AY093047.1| Arabidopsis thaliana putative protein transport protein SEC61 alpha subunit (At1g29310) mRNA, complete cds Length = 1686 Score = 172 bits (87), Expect = 9e-40 Identities = 258/315 (81%) Strand = Plus / Minus Query: 322 caatcagaacccaaagaaaccaagctcggtcgccctctccttctcgaaggtctcaaagta 381 ||||||||| |||||||||||||||||| | || | |||||||| ||||| ||||| || Sbjct: 1525 caatcagaatccaaagaaaccaagctcgctggctttttccttctcaaaggtttcaaaata 1466 Query: 382 ctggtatatgatggtaacagccaacagaataccggttcctgaaccaattgcgcccatgaa 441 ||| |||||||| || || || | | || || || || || ||||| || |||||||| Sbjct: 1465 ctgatatatgattgtgactgcaagtaagattccagtccccgacccaatggctcccatgaa 1406 Query: 442 atcagccagaacagtcaatgcaccgatgcatactccaccaaatgcagcagcagtagggat 501 |||||||| |||||| | ||||||||||| ||||| ||||||||||| || || ||||| Sbjct: 1405 atcagccaaaacagtgagcgcaccgatgcacactcctccaaatgcagccgctgttgggat 1346 Query: 502 gtatctgttcagttccttctgcaagtttgactcgcgatggcctggcataaccatttgttg 561 ||| | |||||| ||||| || ||||| ||||| | || || ||||| ||||||||||| Sbjct: 1345 gtaccggttcagctccttttgtaagttggactctctgtgtcccggcatcaccatttgttg 1286 Query: 562 ttccttcagctgcttagcgacatccttggctgatgaaccagagacttcaatccatgtttt 621 |||||| ||||||||||| ||||| | || || || || |||||||||||||||||||| Sbjct: 1285 ttcctttagctgcttagctacatctctagcagaagacccggagacttcaatccatgtttt 1226 Query: 622 tgagaagagagcaca 636 |||||| || ||||| Sbjct: 1225 tgagaatagggcaca 1211
>gb|AC004481.3| Arabidopsis thaliana chromosome 2 clone F13P17 map ve016, complete sequence Length = 112763 Score = 167 bits (84), Expect = 6e-38 Identities = 177/208 (85%) Strand = Plus / Minus Query: 359 tccttctcgaaggtctcaaagtactggtatatgatggtaacagccaacagaataccggtt 418 |||||||| |||||||| || |||||||||||||| || || ||||||||||| |||||| Sbjct: 35025 tccttctcaaaggtctcgaaatactggtatatgatcgtgaccgccaacagaattccggtt 34966 Query: 419 cctgaaccaattgcgcccatgaaatcagccagaacagtcaatgcaccgatgcatactcca 478 || || || || || |||||||||||||||| ||| || | ||||||||| || ||||| Sbjct: 34965 cccgacccgatggctcccatgaaatcagccaaaacggtaagtgcaccgatacaaactcct 34906 Query: 479 ccaaatgcagcagcagtagggatgtatctgttcagttccttctgcaagtttgactcgcga 538 ||||| || || || || |||||||||||||||||||||||||| |||||||| || | Sbjct: 34905 ccaaaagctgctgctgttgggatgtatctgttcagttccttctgtaagtttgattctctg 34846 Query: 539 tggcctggcataaccatttgttgttcct 566 || |||||||| |||||||||||||||| Sbjct: 34845 tgtcctggcatcaccatttgttgttcct 34818 Score = 73.8 bits (37), Expect = 6e-10 Identities = 64/73 (87%) Strand = Plus / Minus Query: 564 ccttcagctgcttagcgacatccttggctgatgaaccagagacttcaatccatgtttttg 623 |||| ||||||||||| |||||| | || || || |||||||||||||||||||| |||| Sbjct: 34735 cctttagctgcttagctacatccctagcagaagatccagagacttcaatccatgtctttg 34676 Query: 624 agaagagagcaca 636 |||| |||||||| Sbjct: 34675 agaaaagagcaca 34663
>gb|AY087495.1| Arabidopsis thaliana clone 36037 mRNA, complete sequence Length = 1595 Score = 157 bits (79), Expect = 5e-35 Identities = 256/315 (81%) Strand = Plus / Minus Query: 322 caatcagaacccaaagaaaccaagctcggtcgccctctccttctcgaaggtctcaaagta 381 ||||||||| |||||||||||||||||| | || | |||||||| ||||| ||||| || Sbjct: 1527 caatcagaatccaaagaaaccaagctcgctggctttttccttctcaaaggtttcaaaata 1468 Query: 382 ctggtatatgatggtaacagccaacagaataccggttcctgaaccaattgcgcccatgaa 441 ||| |||||||| || || || | | || || || || || ||||| || | |||||| Sbjct: 1467 ctgatatatgattgtgactgcaagtaagattccagtccccgacccaatggctctcatgaa 1408 Query: 442 atcagccagaacagtcaatgcaccgatgcatactccaccaaatgcagcagcagtagggat 501 |||||||| |||||| | ||||||||||| ||||| ||||||||||| || || ||||| Sbjct: 1407 atcagccaaaacagtgagcgcaccgatgcacactcctccaaatgcagccgctgttgggat 1348 Query: 502 gtatctgttcagttccttctgcaagtttgactcgcgatggcctggcataaccatttgttg 561 ||| | |||||| ||||| || ||||| ||||| | || || ||||| ||||||||||| Sbjct: 1347 gtaccggttcagctccttttgtaagttggactctctgtgtcccggcatcaccatttgttg 1288 Query: 562 ttccttcagctgcttagcgacatccttggctgatgaaccagagacttcaatccatgtttt 621 |||||| |||||||||| ||||| | || || || || |||||||||||||||||||| Sbjct: 1287 ttcctttagctgcttagatacatctctagcagaagacccggagacttcaatccatgtttt 1228 Query: 622 tgagaagagagcaca 636 |||||| || ||||| Sbjct: 1227 tgagaatagggcaca 1213
>gb|AC021043.4|AC021043 Arabidopsis thaliana chromosome I BAC F28N24 genomic sequence, complete sequence Length = 154716 Score = 121 bits (61), Expect = 3e-24 Identities = 199/245 (81%) Strand = Plus / Plus Query: 322 caatcagaacccaaagaaaccaagctcggtcgccctctccttctcgaaggtctcaaagta 381 ||||||||| |||||||||||||||||| | || | |||||||| ||||| ||||| || Sbjct: 8861 caatcagaatccaaagaaaccaagctcgctggctttttccttctcaaaggtttcaaaata 8920 Query: 382 ctggtatatgatggtaacagccaacagaataccggttcctgaaccaattgcgcccatgaa 441 ||| |||||||| || || || | | || || || || || ||||| || |||||||| Sbjct: 8921 ctgatatatgattgtgactgcaagtaagattccagtccccgacccaatggctcccatgaa 8980 Query: 442 atcagccagaacagtcaatgcaccgatgcatactccaccaaatgcagcagcagtagggat 501 |||||||| |||||| | ||||||||||| ||||| ||||||||||| || || ||||| Sbjct: 8981 atcagccaaaacagtgagcgcaccgatgcacactcctccaaatgcagccgctgttgggat 9040 Query: 502 gtatctgttcagttccttctgcaagtttgactcgcgatggcctggcataaccatttgttg 561 ||| | |||||| ||||| || ||||| ||||| | || || ||||| ||||||||||| Sbjct: 9041 gtaccggttcagctccttttgtaagttggactctctgtgtcccggcatcaccatttgttg 9100 Query: 562 ttcct 566 ||||| Sbjct: 9101 ttcct 9105 Score = 58.0 bits (29), Expect = 4e-05 Identities = 62/73 (84%) Strand = Plus / Plus Query: 564 ccttcagctgcttagcgacatccttggctgatgaaccagagacttcaatccatgtttttg 623 |||| ||||||||||| ||||| | || || || || |||||||||||||||||||||| Sbjct: 9189 cctttagctgcttagctacatctctagcagaagacccggagacttcaatccatgtttttg 9248 Query: 624 agaagagagcaca 636 |||| || ||||| Sbjct: 9249 agaatagggcaca 9261
>gb|AC121241.32| Medicago truncatula clone mth2-4n3, complete sequence Length = 114591 Score = 111 bits (56), Expect = 3e-21 Identities = 194/240 (80%) Strand = Plus / Plus Query: 327 agaacccaaagaaaccaagctcggtcgccctctccttctcgaaggtctcaaagtactggt 386 |||| |||||||||||||||||| | || || |||||||| || |||||||||||||| | Sbjct: 23781 agaaaccaaagaaaccaagctcgctggctctttccttctcaaatgtctcaaagtactgat 23840 Query: 387 atatgatggtaacagccaacagaataccggttcctgaaccaattgcgcccatgaaatcag 446 | ||||| || || || | | || ||||| || ||||||||||| ||||||||||| | Sbjct: 23841 agatgattgttactgcaagtaatattccggtcccggaaccaattgcacccatgaaatctg 23900 Query: 447 ccagaacagtcaatgcaccgatgcatactccaccaaatgcagcagcagtagggatgtatc 506 ||| || || | ||||| || || | ||| ||||||||||||||||| || || |||| Sbjct: 23901 ccaatactgttagggcaccaatacacattcctccaaatgcagcagcagtgggaatatatc 23960 Query: 507 tgttcagttccttctgcaagtttgactcgcgatggcctggcataaccatttgttgttcct 566 |||||| || || ||||| ||||| || ||||| || ||||| |||||||||||||||| Sbjct: 23961 ggttcagctctttttgcaaatttgattcccgatgaccaggcattaccatttgttgttcct 24020 Score = 50.1 bits (25), Expect = 0.009 Identities = 43/49 (87%) Strand = Plus / Plus Query: 596 gaaccagagacttcaatccatgtttttgagaagagagcacatgctgaca 644 |||||||| ||||||||||| ||||| ||||| | ||||||||||||| Sbjct: 24480 gaaccagacacttcaatccaagttttagagaacaaggcacatgctgaca 24528
>gb|AC146749.23| Medicago truncatula clone mth2-145a1, complete sequence Length = 130793 Score = 111 bits (56), Expect = 3e-21 Identities = 194/240 (80%) Strand = Plus / Minus Query: 327 agaacccaaagaaaccaagctcggtcgccctctccttctcgaaggtctcaaagtactggt 386 |||| |||||||||||||||||| | || || |||||||| || |||||||||||||| | Sbjct: 111020 agaaaccaaagaaaccaagctcgctggctctttccttctcaaatgtctcaaagtactgat 110961 Query: 387 atatgatggtaacagccaacagaataccggttcctgaaccaattgcgcccatgaaatcag 446 | ||||| || || || | | || ||||| || ||||||||||| ||||||||||| | Sbjct: 110960 agatgattgttactgcaagtaatattccggtcccggaaccaattgcacccatgaaatctg 110901 Query: 447 ccagaacagtcaatgcaccgatgcatactccaccaaatgcagcagcagtagggatgtatc 506 ||| || || | ||||| || || | ||| ||||||||||||||||| || || |||| Sbjct: 110900 ccaatactgttagggcaccaatacacattcctccaaatgcagcagcagtgggaatatatc 110841 Query: 507 tgttcagttccttctgcaagtttgactcgcgatggcctggcataaccatttgttgttcct 566 |||||| || || ||||| ||||| || ||||| || ||||| |||||||||||||||| Sbjct: 110840 ggttcagctctttttgcaaatttgattcccgatgaccaggcattaccatttgttgttcct 110781 Score = 50.1 bits (25), Expect = 0.009 Identities = 43/49 (87%) Strand = Plus / Minus Query: 596 gaaccagagacttcaatccatgtttttgagaagagagcacatgctgaca 644 |||||||| ||||||||||| ||||| ||||| | ||||||||||||| Sbjct: 110321 gaaccagacacttcaatccaagttttagagaacaaggcacatgctgaca 110273
>ref|NM_106519.1| Arabidopsis thaliana protein translocase AT1G78720 mRNA, complete cds Length = 1428 Score = 109 bits (55), Expect = 1e-20 Identities = 211/263 (80%) Strand = Plus / Minus Query: 365 tcgaaggtctcaaagtactggtatatgatggtaacagccaacagaataccggttcctgaa 424 |||||||| || || ||||| |||||||| ||||| || | || || || || ||||| Sbjct: 1388 tcgaaggtttcgaaatactgatatatgattgtaaccgcaagaaggattccagtgcctgac 1329 Query: 425 ccaattgcgcccatgaaatcagccagaacagtcaatgcaccgatgcatactccaccaaat 484 ||||| || ||||| |||||||||| ||||| | ||||||||| || | |||||||| Sbjct: 1328 ccaatagctcccattaaatcagccaagacagtgagtgcaccgatacacagaccaccaaaa 1269 Query: 485 gcagcagcagtagggatgtatctgttcagttccttctgcaagtttgactcgcgatggcct 544 || ||||| || || ||||||| |||||||||||| || | |||||| || || || || Sbjct: 1268 gctgcagccgtgggaatgtatcggttcagttccttttgaaggtttgagtctcggtgacca 1209 Query: 545 ggcataaccatttgttgttccttcagctgcttagcgacatccttggctgatgaaccagag 604 ||||| |||||||| ||||| | || || | |||||||| |||||||||||||| ||| Sbjct: 1208 ggcattaccatttgctgttctcttagttgtctggcgacatctttggctgatgaaccggag 1149 Query: 605 acttcaatccatgtttttgagaa 627 ||||||||||| ||||| ||||| Sbjct: 1148 acttcaatccaggttttagagaa 1126
>gb|BC045117.1| Xenopus laevis protein transport protein SEC61 alpha subunit isoform 1, mRNA (cDNA clone MGC:53497 IMAGE:5572471), complete cds Length = 1894 Score = 91.7 bits (46), Expect = 3e-15 Identities = 118/142 (83%) Strand = Plus / Minus Query: 366 cgaaggtctcaaagtactggtatatgatggtaacagccaacagaataccggttcctgaac 425 ||||| ||||||| ||||| || |||||||| ||||||||||| ||||| ||||| |||| Sbjct: 1464 cgaagatctcaaaatactgatagatgatggtgacagccaacaggatacctgttccagaac 1405 Query: 426 caattgcgcccatgaaatcagccagaacagtcaatgcaccgatgcatactccaccaaatg 485 |||| || |||| |||||| ||||| |||| | ||| |||||||| | || ||||| | Sbjct: 1404 caatggctcccaggaaatctgccaggacagagagtgctccgatgcaaagacctccaaaag 1345 Query: 486 cagcagcagtagggatgtatct 507 ||||||| || ||||||||||| Sbjct: 1344 cagcagctgttgggatgtatct 1323 Score = 42.1 bits (21), Expect = 2.2 Identities = 42/49 (85%) Strand = Plus / Minus Query: 581 acatccttggctgatgaaccagagacttcaatccatgtttttgagaaga 629 |||||||| || || || ||||| ||||||||||| || |||||||||| Sbjct: 1249 acatcctttgcagaagagccagacacttcaatccaggtctttgagaaga 1201
>gb|AC091776.19| Chlamydomonas reinhardtii clone cr-4i21, complete sequence Length = 48498 Score = 81.8 bits (41), Expect = 3e-12 Identities = 74/85 (87%) Strand = Plus / Minus Query: 357 tctccttctcgaaggtctcaaagtactggtatatgatggtaacagccaacagaataccgg 416 ||||||||||| | ||||| ||||||||||| |||||||| ||||||| ||| ||||||| Sbjct: 43536 tctccttctcgtacgtctcgaagtactggtaaatgatggtcacagccagcaggataccgg 43477 Query: 417 ttcctgaaccaattgcgcccatgaa 441 | || || ||||| ||||||||||| Sbjct: 43476 tgcccgagccaatggcgcccatgaa 43452
>gb|AC090435.28| Chlamydomonas reinhardtii clone cr-32m22, complete sequence Length = 79677 Score = 81.8 bits (41), Expect = 3e-12 Identities = 74/85 (87%) Strand = Plus / Minus Query: 357 tctccttctcgaaggtctcaaagtactggtatatgatggtaacagccaacagaataccgg 416 ||||||||||| | ||||| ||||||||||| |||||||| ||||||| ||| ||||||| Sbjct: 22249 tctccttctcgtacgtctcgaagtactggtaaatgatggtcacagccagcaggataccgg 22190 Query: 417 ttcctgaaccaattgcgcccatgaa 441 | || || ||||| ||||||||||| Sbjct: 22189 tgcccgagccaatggcgcccatgaa 22165
>ref|XM_507657.1| PREDICTED: Pan troglodytes similar to Sec61 alpha isoform 2 (LOC450305), mRNA Length = 1714 Score = 79.8 bits (40), Expect = 1e-11 Identities = 76/88 (86%) Strand = Plus / Minus Query: 551 accatttgttgttccttcagctgcttagcgacatccttggctgatgaaccagagacttca 610 ||||| || ||||| |||||||| ||||| ||||| |||||||| |||||||| |||||| Sbjct: 1482 accatctgctgttctttcagctgtttagctacatctttggctgaggaaccagacacttca 1423 Query: 611 atccatgtttttgagaagagagcacatg 638 |||||||| || ||||||| ||||||| Sbjct: 1422 atccatgtcttagagaagaatgcacatg 1395
>ref|NM_018144.2| Homo sapiens Sec61 alpha 2 subunit (S. cerevisiae) (SEC61A2), mRNA Length = 1892 Score = 79.8 bits (40), Expect = 1e-11 Identities = 76/88 (86%) Strand = Plus / Minus Query: 551 accatttgttgttccttcagctgcttagcgacatccttggctgatgaaccagagacttca 610 ||||| || ||||| |||||||| ||||| ||||| |||||||| |||||||| |||||| Sbjct: 1287 accatctgctgttctttcagctgtttagctacatctttggctgaggaaccagacacttca 1228 Query: 611 atccatgtttttgagaagagagcacatg 638 |||||||| || ||||||| ||||||| Sbjct: 1227 atccatgtcttagagaagaatgcacatg 1200
>gb|AC125480.33| Medicago truncatula clone mth2-8c24, complete sequence Length = 119718 Score = 79.8 bits (40), Expect = 1e-11 Identities = 190/240 (79%) Strand = Plus / Minus Query: 327 agaacccaaagaaaccaagctcggtcgccctctccttctcgaaggtctcaaagtactggt 386 |||| |||||||| |||||||| | || || |||||||| || || ||||||||||| | Sbjct: 29536 agaaaccaaagaagccaagctcactggctctttccttctcaaatgtttcaaagtactgat 29477 Query: 387 atatgatggtaacagccaacagaataccggttcctgaaccaattgcgcccatgaaatcag 446 | ||||| || || || | || ||| || || |||||||| ||||| ||||| ||||| | Sbjct: 29476 agatgatcgttactgcaagcaaaatccccgtccctgaacctattgctcccataaaatctg 29417 Query: 447 ccagaacagtcaatgcaccgatgcatactccaccaaatgcagcagcagtagggatgtatc 506 ||| || |||| ||||| || || | || || ||||| |||||||| |||||||||| Sbjct: 29416 ccaacactgtcagagcaccaatacaaatgcctccgaatgctgcagcagtggggatgtatc 29357 Query: 507 tgttcagttccttctgcaagtttgactcgcgatggcctggcataaccatttgttgttcct 566 ||| || || ||||||||||| || || || || || ||||| |||||||||||||||| Sbjct: 29356 ggtttagctctttctgcaagttcgattcacggtgtccaggcatcaccatttgttgttcct 29297 Score = 50.1 bits (25), Expect = 0.009 Identities = 64/77 (83%) Strand = Plus / Minus Query: 572 tgcttagcgacatccttggctgatgaaccagagacttcaatccatgtttttgagaagaga 631 ||||| || |||||| | || |||||||||||||| |||||||| ||||| ||||| | Sbjct: 28443 tgctttgcaacatccctagcagatgaaccagagacctcaatccaagttttagagaacaag 28384 Query: 632 gcacatgctgacagcat 648 |||||||| || ||||| Sbjct: 28383 gcacatgcagatagcat 28367
>emb|CR925994.1| Pongo pygmaeus mRNA; cDNA DKFZp459O1320 (from clone DKFZp459O1320) Length = 2508 Score = 79.8 bits (40), Expect = 1e-11 Identities = 76/88 (86%) Strand = Plus / Minus Query: 551 accatttgttgttccttcagctgcttagcgacatccttggctgatgaaccagagacttca 610 ||||| || ||||| |||||||| ||||| ||||| |||||||| |||||||| |||||| Sbjct: 1367 accatctgctgttctttcagctgtttagctacatctttggctgaggaaccagacacttca 1308 Query: 611 atccatgtttttgagaagagagcacatg 638 |||||||| || ||||||| ||||||| Sbjct: 1307 atccatgtcttagagaagaatgcacatg 1280
>gb|BC026179.1| Homo sapiens Sec61 alpha 2 subunit (S. cerevisiae), mRNA (cDNA clone MGC:32910 IMAGE:4823130), complete cds Length = 2220 Score = 79.8 bits (40), Expect = 1e-11 Identities = 76/88 (86%) Strand = Plus / Minus Query: 551 accatttgttgttccttcagctgcttagcgacatccttggctgatgaaccagagacttca 610 ||||| || ||||| |||||||| ||||| ||||| |||||||| |||||||| |||||| Sbjct: 1296 accatctgctgttctttcagctgtttagctacatctttggctgaggaaccagacacttca 1237 Query: 611 atccatgtttttgagaagagagcacatg 638 |||||||| || ||||||| ||||||| Sbjct: 1236 atccatgtcttagagaagaatgcacatg 1209
>emb|CR607709.1| full-length cDNA clone CS0DE010YO18 of Placenta of Homo sapiens (human) Length = 1710 Score = 79.8 bits (40), Expect = 1e-11 Identities = 76/88 (86%) Strand = Plus / Minus Query: 551 accatttgttgttccttcagctgcttagcgacatccttggctgatgaaccagagacttca 610 ||||| || ||||| |||||||| ||||| ||||| |||||||| |||||||| |||||| Sbjct: 586 accatctgctgttctttcagctgtttagctacatctttggctgaggaaccagacacttca 527 Query: 611 atccatgtttttgagaagagagcacatg 638 |||||||| || ||||||| ||||||| Sbjct: 526 atccatgtcttagagaagaatgcacatg 499
>dbj|AK057532.1| Homo sapiens cDNA FLJ32970 fis, clone TESTI2008840, highly similar to PROTEIN TRANSPORT PROTEIN SEC61 ALPHA SUBUNIT Length = 2305 Score = 79.8 bits (40), Expect = 1e-11 Identities = 76/88 (86%) Strand = Plus / Minus Query: 551 accatttgttgttccttcagctgcttagcgacatccttggctgatgaaccagagacttca 610 ||||| || ||||| |||||||| ||||| ||||| |||||||| |||||||| |||||| Sbjct: 1420 accatctgctgttctttcagctgtttagctacatctttggctgaggaaccagacacttca 1361 Query: 611 atccatgtttttgagaagagagcacatg 638 |||||||| || ||||||| ||||||| Sbjct: 1360 atccatgtcttagagaagaatgcacatg 1333
>dbj|AK022027.1| Homo sapiens cDNA FLJ11965 fis, clone HEMBB1001112, moderately similar to Homo sapiens sec61 homolog mRNA Length = 1334 Score = 79.8 bits (40), Expect = 1e-11 Identities = 76/88 (86%) Strand = Plus / Minus Query: 551 accatttgttgttccttcagctgcttagcgacatccttggctgatgaaccagagacttca 610 ||||| || ||||| |||||||| ||||| ||||| |||||||| |||||||| |||||| Sbjct: 729 accatctgctgttctttcagctgtttagctacatctttggctgaggaaccagacacttca 670 Query: 611 atccatgtttttgagaagagagcacatg 638 |||||||| || ||||||| ||||||| Sbjct: 669 atccatgtcttagagaagaatgcacatg 642
>dbj|AK022640.1| Homo sapiens cDNA FLJ12578 fis, clone NT2RM4001054, moderately similar to Homo sapiens sec61 homolog mRNA Length = 2026 Score = 79.8 bits (40), Expect = 1e-11 Identities = 76/88 (86%) Strand = Plus / Minus Query: 551 accatttgttgttccttcagctgcttagcgacatccttggctgatgaaccagagacttca 610 ||||| || ||||| |||||||| ||||| ||||| |||||||| |||||||| |||||| Sbjct: 1281 accatctgctgttctttcagctgtttagctacatctttggctgaggaaccagacacttca 1222 Query: 611 atccatgtttttgagaagagagcacatg 638 |||||||| || ||||||| ||||||| Sbjct: 1221 atccatgtcttagagaagaatgcacatg 1194
>dbj|AK001440.1| Homo sapiens cDNA FLJ10578 fis, clone NT2RP2003433, highly similar to PROTEIN TRANSPORT PROTEIN SEC61 ALPHA SUBUNIT Length = 1186 Score = 79.8 bits (40), Expect = 1e-11 Identities = 76/88 (86%) Strand = Plus / Minus Query: 551 accatttgttgttccttcagctgcttagcgacatccttggctgatgaaccagagacttca 610 ||||| || ||||| |||||||| ||||| ||||| |||||||| |||||||| |||||| Sbjct: 581 accatctgctgttctttcagctgtttagctacatctttggctgaggaaccagacacttca 522 Query: 611 atccatgtttttgagaagagagcacatg 638 |||||||| || ||||||| ||||||| Sbjct: 521 atccatgtcttagagaagaatgcacatg 494
>gb|AF346603.1|AF346603 Homo sapiens Sec61 alpha form 2 mRNA, complete cds Length = 1893 Score = 79.8 bits (40), Expect = 1e-11 Identities = 76/88 (86%) Strand = Plus / Minus Query: 551 accatttgttgttccttcagctgcttagcgacatccttggctgatgaaccagagacttca 610 ||||| || ||||| |||||||| ||||| ||||| |||||||| |||||||| |||||| Sbjct: 1287 accatctgctgttctttcagctgtttagctacatctttggctgaggaaccagacacttca 1228 Query: 611 atccatgtttttgagaagagagcacatg 638 |||||||| || ||||||| ||||||| Sbjct: 1227 atccatgtcttagagaagaatgcacatg 1200
>ref|XM_414364.1| PREDICTED: Gallus gallus similar to Sec61 alpha subunit homolog (LOC416023), mRNA Length = 2667 Score = 75.8 bits (38), Expect = 2e-10 Identities = 83/98 (84%) Strand = Plus / Minus Query: 539 tggcctggcataaccatttgttgttccttcagctgcttagcgacatccttggctgatgaa 598 |||||| |||| |||||||| ||||| |||| || || || ||||| ||||| || || Sbjct: 1694 tggcctcgcattaccatttgctgttctttcaattgtttggcaacatctttggcagaggag 1635 Query: 599 ccagagacttcaatccatgtttttgagaagagagcaca 636 ||||||||||||||||||||||| ||||||| |||||| Sbjct: 1634 ccagagacttcaatccatgttttagagaagaaagcaca 1597
>gb|AC005679.1|F9K20 Arabidopsis thaliana chromosome 1 BAC F9K20 sequence, complete sequence Length = 90425 Score = 75.8 bits (38), Expect = 2e-10 Identities = 161/202 (79%) Strand = Plus / Plus Query: 365 tcgaaggtctcaaagtactggtatatgatggtaacagccaacagaataccggttcctgaa 424 |||||||| || || ||||| |||||||| ||||| || | || || || || ||||| Sbjct: 70419 tcgaaggtttcgaaatactgatatatgattgtaaccgcaagaaggattccagtgcctgac 70478 Query: 425 ccaattgcgcccatgaaatcagccagaacagtcaatgcaccgatgcatactccaccaaat 484 ||||| || ||||| |||||||||| ||||| | ||||||||| || | |||||||| Sbjct: 70479 ccaatagctcccattaaatcagccaagacagtgagtgcaccgatacacagaccaccaaaa 70538 Query: 485 gcagcagcagtagggatgtatctgttcagttccttctgcaagtttgactcgcgatggcct 544 || ||||| || || ||||||| |||||||||||| || | |||||| || || || || Sbjct: 70539 gctgcagccgtgggaatgtatcggttcagttccttttgaaggtttgagtctcggtgacca 70598 Query: 545 ggcataaccatttgttgttcct 566 ||||| |||||||| ||||||| Sbjct: 70599 ggcattaccatttgctgttcct 70620 Score = 67.9 bits (34), Expect = 4e-08 Identities = 46/50 (92%) Strand = Plus / Plus Query: 578 gcgacatccttggctgatgaaccagagacttcaatccatgtttttgagaa 627 |||||||| |||||||||||||| |||||||||||||| ||||| ||||| Sbjct: 70742 gcgacatctttggctgatgaaccggagacttcaatccaggttttagagaa 70791
>ref|NM_016906.2| Mus musculus Sec61 alpha 1 subunit (S. cerevisiae) (Sec61a1), mRNA Length = 3040 Score = 69.9 bits (35), Expect = 1e-08 Identities = 59/67 (88%) Strand = Plus / Minus Query: 563 tccttcagctgcttagcgacatccttggctgatgaaccagagacttcaatccatgttttt 622 |||||||||||||| || ||||| ||||| || ||||| |||||||| ||||||||||| Sbjct: 1296 tccttcagctgctttgcaacatctttggcagaagaacctgagacttcgatccatgttttg 1237 Query: 623 gagaaga 629 ||||||| Sbjct: 1236 gagaaga 1230 Score = 46.1 bits (23), Expect = 0.14 Identities = 29/31 (93%) Strand = Plus / Minus Query: 366 cgaaggtctcaaagtactggtatatgatggt 396 ||||| |||||||||||||||| |||||||| Sbjct: 1493 cgaagatctcaaagtactggtagatgatggt 1463
>gb|BC006020.1| Mus musculus Sec61 alpha 1 subunit (S. cerevisiae), mRNA (cDNA clone IMAGE:3488736) Length = 2641 Score = 69.9 bits (35), Expect = 1e-08 Identities = 59/67 (88%) Strand = Plus / Minus Query: 563 tccttcagctgcttagcgacatccttggctgatgaaccagagacttcaatccatgttttt 622 |||||||||||||| || ||||| ||||| || ||||| |||||||| ||||||||||| Sbjct: 880 tccttcagctgctttgcaacatctttggcagaagaacctgagacttcgatccatgttttg 821 Query: 623 gagaaga 629 ||||||| Sbjct: 820 gagaaga 814 Score = 46.1 bits (23), Expect = 0.14 Identities = 29/31 (93%) Strand = Plus / Minus Query: 366 cgaaggtctcaaagtactggtatatgatggt 396 ||||| |||||||||||||||| |||||||| Sbjct: 1077 cgaagatctcaaagtactggtagatgatggt 1047
>gb|BC003707.1| Mus musculus Sec61 alpha 1 subunit (S. cerevisiae), mRNA (cDNA clone MGC:5676 IMAGE:3592772), complete cds Length = 2982 Score = 69.9 bits (35), Expect = 1e-08 Identities = 59/67 (88%) Strand = Plus / Minus Query: 563 tccttcagctgcttagcgacatccttggctgatgaaccagagacttcaatccatgttttt 622 |||||||||||||| || ||||| ||||| || ||||| |||||||| ||||||||||| Sbjct: 1221 tccttcagctgctttgcaacatctttggcagaagaacctgagacttcgatccatgttttg 1162 Query: 623 gagaaga 629 ||||||| Sbjct: 1161 gagaaga 1155 Score = 46.1 bits (23), Expect = 0.14 Identities = 29/31 (93%) Strand = Plus / Minus Query: 366 cgaaggtctcaaagtactggtatatgatggt 396 ||||| |||||||||||||||| |||||||| Sbjct: 1418 cgaagatctcaaagtactggtagatgatggt 1388
>ref|XM_797003.1| PREDICTED: Strongylocentrotus purpuratus similar to CG9539-PA, transcript variant 8 (LOC576070), mRNA Length = 2918 Score = 69.9 bits (35), Expect = 1e-08 Identities = 68/79 (86%) Strand = Plus / Minus Query: 551 accatttgttgttccttcagctgcttagcgacatccttggctgatgaaccagagacttca 610 ||||| |||||||||||||| || ||||| ||||||||||| ||||| || |||||||| Sbjct: 1293 accatctgttgttccttcagttgtttagcaacatccttggcagatgatcctgagacttcg 1234 Query: 611 atccatgtttttgagaaga 629 ||||| || || ||||||| Sbjct: 1233 atccaggtcttggagaaga 1215 Score = 40.1 bits (20), Expect = 8.8 Identities = 44/52 (84%) Strand = Plus / Minus Query: 461 gcaccgatgcatactccaccaaatgcagcagcagtagggatgtatctgttca 512 ||||||||||| | |||||||| || || ||||| |||||||| ||||||| Sbjct: 1383 gcaccgatgcacagaccaccaaaggctgctgcagttgggatgtacctgttca 1332
>ref|XM_796992.1| PREDICTED: Strongylocentrotus purpuratus similar to CG9539-PA, transcript variant 7 (LOC576070), mRNA Length = 2924 Score = 69.9 bits (35), Expect = 1e-08 Identities = 68/79 (86%) Strand = Plus / Minus Query: 551 accatttgttgttccttcagctgcttagcgacatccttggctgatgaaccagagacttca 610 ||||| |||||||||||||| || ||||| ||||||||||| ||||| || |||||||| Sbjct: 1299 accatctgttgttccttcagttgtttagcaacatccttggcagatgatcctgagacttcg 1240 Query: 611 atccatgtttttgagaaga 629 ||||| || || ||||||| Sbjct: 1239 atccaggtcttggagaaga 1221 Score = 40.1 bits (20), Expect = 8.8 Identities = 44/52 (84%) Strand = Plus / Minus Query: 461 gcaccgatgcatactccaccaaatgcagcagcagtagggatgtatctgttca 512 ||||||||||| | |||||||| || || ||||| |||||||| ||||||| Sbjct: 1389 gcaccgatgcacagaccaccaaaggctgctgcagttgggatgtacctgttca 1338
>ref|XM_796979.1| PREDICTED: Strongylocentrotus purpuratus similar to CG9539-PA, transcript variant 6 (LOC576070), mRNA Length = 2912 Score = 69.9 bits (35), Expect = 1e-08 Identities = 68/79 (86%) Strand = Plus / Minus Query: 551 accatttgttgttccttcagctgcttagcgacatccttggctgatgaaccagagacttca 610 ||||| |||||||||||||| || ||||| ||||||||||| ||||| || |||||||| Sbjct: 1287 accatctgttgttccttcagttgtttagcaacatccttggcagatgatcctgagacttcg 1228 Query: 611 atccatgtttttgagaaga 629 ||||| || || ||||||| Sbjct: 1227 atccaggtcttggagaaga 1209 Score = 40.1 bits (20), Expect = 8.8 Identities = 44/52 (84%) Strand = Plus / Minus Query: 461 gcaccgatgcatactccaccaaatgcagcagcagtagggatgtatctgttca 512 ||||||||||| | |||||||| || || ||||| |||||||| ||||||| Sbjct: 1377 gcaccgatgcacagaccaccaaaggctgctgcagttgggatgtacctgttca 1326
>ref|XM_796967.1| PREDICTED: Strongylocentrotus purpuratus similar to CG9539-PA, transcript variant 5 (LOC576070), mRNA Length = 2726 Score = 69.9 bits (35), Expect = 1e-08 Identities = 68/79 (86%) Strand = Plus / Minus Query: 551 accatttgttgttccttcagctgcttagcgacatccttggctgatgaaccagagacttca 610 ||||| |||||||||||||| || ||||| ||||||||||| ||||| || |||||||| Sbjct: 1101 accatctgttgttccttcagttgtttagcaacatccttggcagatgatcctgagacttcg 1042 Query: 611 atccatgtttttgagaaga 629 ||||| || || ||||||| Sbjct: 1041 atccaggtcttggagaaga 1023 Score = 40.1 bits (20), Expect = 8.8 Identities = 44/52 (84%) Strand = Plus / Minus Query: 461 gcaccgatgcatactccaccaaatgcagcagcagtagggatgtatctgttca 512 ||||||||||| | |||||||| || || ||||| |||||||| ||||||| Sbjct: 1191 gcaccgatgcacagaccaccaaaggctgctgcagttgggatgtacctgttca 1140
>ref|XM_796949.1| PREDICTED: Strongylocentrotus purpuratus similar to CG9539-PA, transcript variant 4 (LOC576070), mRNA Length = 2921 Score = 69.9 bits (35), Expect = 1e-08 Identities = 68/79 (86%) Strand = Plus / Minus Query: 551 accatttgttgttccttcagctgcttagcgacatccttggctgatgaaccagagacttca 610 ||||| |||||||||||||| || ||||| ||||||||||| ||||| || |||||||| Sbjct: 1296 accatctgttgttccttcagttgtttagcaacatccttggcagatgatcctgagacttcg 1237 Query: 611 atccatgtttttgagaaga 629 ||||| || || ||||||| Sbjct: 1236 atccaggtcttggagaaga 1218 Score = 40.1 bits (20), Expect = 8.8 Identities = 44/52 (84%) Strand = Plus / Minus Query: 461 gcaccgatgcatactccaccaaatgcagcagcagtagggatgtatctgttca 512 ||||||||||| | |||||||| || || ||||| |||||||| ||||||| Sbjct: 1386 gcaccgatgcacagaccaccaaaggctgctgcagttgggatgtacctgttca 1335
>ref|XM_796930.1| PREDICTED: Strongylocentrotus purpuratus similar to CG9539-PA, transcript variant 3 (LOC576070), mRNA Length = 2845 Score = 69.9 bits (35), Expect = 1e-08 Identities = 68/79 (86%) Strand = Plus / Minus Query: 551 accatttgttgttccttcagctgcttagcgacatccttggctgatgaaccagagacttca 610 ||||| |||||||||||||| || ||||| ||||||||||| ||||| || |||||||| Sbjct: 1220 accatctgttgttccttcagttgtttagcaacatccttggcagatgatcctgagacttcg 1161 Query: 611 atccatgtttttgagaaga 629 ||||| || || ||||||| Sbjct: 1160 atccaggtcttggagaaga 1142 Score = 40.1 bits (20), Expect = 8.8 Identities = 44/52 (84%) Strand = Plus / Minus Query: 461 gcaccgatgcatactccaccaaatgcagcagcagtagggatgtatctgttca 512 ||||||||||| | |||||||| || || ||||| |||||||| ||||||| Sbjct: 1310 gcaccgatgcacagaccaccaaaggctgctgcagttgggatgtacctgttca 1259
>ref|XM_796907.1| PREDICTED: Strongylocentrotus purpuratus similar to CG9539-PA, transcript variant 2 (LOC576070), mRNA Length = 2374 Score = 69.9 bits (35), Expect = 1e-08 Identities = 68/79 (86%) Strand = Plus / Minus Query: 551 accatttgttgttccttcagctgcttagcgacatccttggctgatgaaccagagacttca 610 ||||| |||||||||||||| || ||||| ||||||||||| ||||| || |||||||| Sbjct: 749 accatctgttgttccttcagttgtttagcaacatccttggcagatgatcctgagacttcg 690 Query: 611 atccatgtttttgagaaga 629 ||||| || || ||||||| Sbjct: 689 atccaggtcttggagaaga 671 Score = 40.1 bits (20), Expect = 8.8 Identities = 44/52 (84%) Strand = Plus / Minus Query: 461 gcaccgatgcatactccaccaaatgcagcagcagtagggatgtatctgttca 512 ||||||||||| | |||||||| || || ||||| |||||||| ||||||| Sbjct: 839 gcaccgatgcacagaccaccaaaggctgctgcagttgggatgtacctgttca 788
>ref|XM_775245.1| PREDICTED: Strongylocentrotus purpuratus similar to CG9539-PA, transcript variant 1 (LOC576070), mRNA Length = 2924 Score = 69.9 bits (35), Expect = 1e-08 Identities = 68/79 (86%) Strand = Plus / Minus Query: 551 accatttgttgttccttcagctgcttagcgacatccttggctgatgaaccagagacttca 610 ||||| |||||||||||||| || ||||| ||||||||||| ||||| || |||||||| Sbjct: 1299 accatctgttgttccttcagttgtttagcaacatccttggcagatgatcctgagacttcg 1240 Query: 611 atccatgtttttgagaaga 629 ||||| || || ||||||| Sbjct: 1239 atccaggtcttggagaaga 1221 Score = 40.1 bits (20), Expect = 8.8 Identities = 44/52 (84%) Strand = Plus / Minus Query: 461 gcaccgatgcatactccaccaaatgcagcagcagtagggatgtatctgttca 512 ||||||||||| | |||||||| || || ||||| |||||||| ||||||| Sbjct: 1389 gcaccgatgcacagaccaccaaaggctgctgcagttgggatgtacctgttca 1338
>dbj|AK153055.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:I830120D02 product:Sec61 alpha 1 subunit (S. cerevisiae), full insert sequence Length = 3029 Score = 69.9 bits (35), Expect = 1e-08 Identities = 59/67 (88%) Strand = Plus / Minus Query: 563 tccttcagctgcttagcgacatccttggctgatgaaccagagacttcaatccatgttttt 622 |||||||||||||| || ||||| ||||| || ||||| |||||||| ||||||||||| Sbjct: 1285 tccttcagctgctttgcaacatctttggcagaagaacctgagacttcgatccatgttttg 1226 Query: 623 gagaaga 629 ||||||| Sbjct: 1225 gagaaga 1219 Score = 46.1 bits (23), Expect = 0.14 Identities = 29/31 (93%) Strand = Plus / Minus Query: 366 cgaaggtctcaaagtactggtatatgatggt 396 ||||| |||||||||||||||| |||||||| Sbjct: 1482 cgaagatctcaaagtactggtagatgatggt 1452
>dbj|AK159349.1| Mus musculus osteoclast-like cell cDNA, RIKEN full-length enriched library, clone:I420017L22 product:Sec61 alpha 1 subunit (S. cerevisiae), full insert sequence Length = 3025 Score = 69.9 bits (35), Expect = 1e-08 Identities = 59/67 (88%) Strand = Plus / Minus Query: 563 tccttcagctgcttagcgacatccttggctgatgaaccagagacttcaatccatgttttt 622 |||||||||||||| || ||||| ||||| || ||||| |||||||| ||||||||||| Sbjct: 1283 tccttcagctgctttgcaacatctttggcagaagaacctgagacttcgatccatgttttg 1224 Query: 623 gagaaga 629 ||||||| Sbjct: 1223 gagaaga 1217 Score = 46.1 bits (23), Expect = 0.14 Identities = 29/31 (93%) Strand = Plus / Minus Query: 366 cgaaggtctcaaagtactggtatatgatggt 396 ||||| |||||||||||||||| |||||||| Sbjct: 1480 cgaagatctcaaagtactggtagatgatggt 1450
>dbj|AK167484.1| Mus musculus 14 days pregnant adult female placenta cDNA, RIKEN full-length enriched library, clone:I530016O21 product:Sec61 alpha 1 subunit (S. cerevisiae), full insert sequence Length = 2968 Score = 69.9 bits (35), Expect = 1e-08 Identities = 59/67 (88%) Strand = Plus / Minus Query: 563 tccttcagctgcttagcgacatccttggctgatgaaccagagacttcaatccatgttttt 622 |||||||||||||| || ||||| ||||| || ||||| |||||||| ||||||||||| Sbjct: 1225 tccttcagctgctttgcaacatctttggcagaagaacctgagacttcgatccatgttttg 1166 Query: 623 gagaaga 629 ||||||| Sbjct: 1165 gagaaga 1159 Score = 46.1 bits (23), Expect = 0.14 Identities = 29/31 (93%) Strand = Plus / Minus Query: 366 cgaaggtctcaaagtactggtatatgatggt 396 ||||| |||||||||||||||| |||||||| Sbjct: 1422 cgaagatctcaaagtactggtagatgatggt 1392
>dbj|AK088473.1| Mus musculus 2 days neonate thymus thymic cells cDNA, RIKEN full-length enriched library, clone:E430018I05 product:SEC61, alpha subunit (S. cerevisiae), full insert sequence Length = 3040 Score = 69.9 bits (35), Expect = 1e-08 Identities = 59/67 (88%) Strand = Plus / Minus Query: 563 tccttcagctgcttagcgacatccttggctgatgaaccagagacttcaatccatgttttt 622 |||||||||||||| || ||||| ||||| || ||||| |||||||| ||||||||||| Sbjct: 1296 tccttcagctgctttgcaacatctttggcagaagaacctgagacttcgatccatgttttg 1237 Query: 623 gagaaga 629 ||||||| Sbjct: 1236 gagaaga 1230 Score = 46.1 bits (23), Expect = 0.14 Identities = 29/31 (93%) Strand = Plus / Minus Query: 366 cgaaggtctcaaagtactggtatatgatggt 396 ||||| |||||||||||||||| |||||||| Sbjct: 1493 cgaagatctcaaagtactggtagatgatggt 1463
>gb|AF222743.1|AF222743 Mus musculus Sec61 alpha-1 mRNA, complete cds Length = 1482 Score = 69.9 bits (35), Expect = 1e-08 Identities = 59/67 (88%) Strand = Plus / Minus Query: 563 tccttcagctgcttagcgacatccttggctgatgaaccagagacttcaatccatgttttt 622 |||||||||||||| || ||||| ||||| || ||||| |||||||| ||||||||||| Sbjct: 1217 tccttcagctgctttgcaacatctttggcagaagaacctgagacttcgatccatgttttg 1158 Query: 623 gagaaga 629 ||||||| Sbjct: 1157 gagaaga 1151 Score = 46.1 bits (23), Expect = 0.14 Identities = 29/31 (93%) Strand = Plus / Minus Query: 366 cgaaggtctcaaagtactggtatatgatggt 396 ||||| |||||||||||||||| |||||||| Sbjct: 1414 cgaagatctcaaagtactggtagatgatggt 1384
>gb|AF145253.1|AF145253 Mus musculus Sec61 alpha isoform 1 mRNA, complete cds Length = 1482 Score = 69.9 bits (35), Expect = 1e-08 Identities = 59/67 (88%) Strand = Plus / Minus Query: 563 tccttcagctgcttagcgacatccttggctgatgaaccagagacttcaatccatgttttt 622 |||||||||||||| || ||||| ||||| || ||||| |||||||| ||||||||||| Sbjct: 1217 tccttcagctgctttgcaacatctttggcagaagaacctgagacttcgatccatgttttg 1158 Query: 623 gagaaga 629 ||||||| Sbjct: 1157 gagaaga 1151 Score = 46.1 bits (23), Expect = 0.14 Identities = 29/31 (93%) Strand = Plus / Minus Query: 366 cgaaggtctcaaagtactggtatatgatggt 396 ||||| |||||||||||||||| |||||||| Sbjct: 1414 cgaagatctcaaagtactggtagatgatggt 1384
>ref|NM_001040504.1| Bos taurus Sec61 alpha form 1 (SEC61A1), mRNA Length = 1634 Score = 67.9 bits (34), Expect = 4e-08 Identities = 76/90 (84%) Strand = Plus / Minus Query: 358 ctccttctcgaaggtctcaaagtactggtatatgatggtaacagccaacagaataccggt 417 ||||||| ||||| |||||||||||||||| |||||||| || |||| ||| || ||||| Sbjct: 1414 ctccttcacgaagatctcaaagtactggtagatgatggtgaccgccagcaggatcccggt 1355 Query: 418 tcctgaaccaattgcgcccatgaaatcagc 447 ||| || || || ||||||| ||| ||||| Sbjct: 1354 tccagacccgatggcgcccaagaagtcagc 1325 Score = 40.1 bits (20), Expect = 8.8 Identities = 68/84 (80%) Strand = Plus / Minus Query: 546 gcataaccatttgttgttccttcagctgcttagcgacatccttggctgatgaaccagaga 605 |||| ||||| || || |||||||||||||| || || |||||||| || || || |||| Sbjct: 1226 gcatcaccatctgctgctccttcagctgctttgcaacgtccttggcggaggagcccgaga 1167 Query: 606 cttcaatccatgtttttgagaaga 629 | || ||||| || || ||||||| Sbjct: 1166 cctcgatccacgtcttggagaaga 1143
>gb|BT020701.1| Bos taurus Sec61 alpha 1 subunit (S. cerevisiae) (SEC61A1), mRNA, complete cds Length = 1634 Score = 67.9 bits (34), Expect = 4e-08 Identities = 76/90 (84%) Strand = Plus / Minus Query: 358 ctccttctcgaaggtctcaaagtactggtatatgatggtaacagccaacagaataccggt 417 ||||||| ||||| |||||||||||||||| |||||||| || |||| ||| || ||||| Sbjct: 1414 ctccttcacgaagatctcaaagtactggtagatgatggtgaccgccagcaggatcccggt 1355 Query: 418 tcctgaaccaattgcgcccatgaaatcagc 447 ||| || || || ||||||| ||| ||||| Sbjct: 1354 tccagacccgatggcgcccaagaagtcagc 1325 Score = 40.1 bits (20), Expect = 8.8 Identities = 68/84 (80%) Strand = Plus / Minus Query: 546 gcataaccatttgttgttccttcagctgcttagcgacatccttggctgatgaaccagaga 605 |||| ||||| || || |||||||||||||| || || |||||||| || || || |||| Sbjct: 1226 gcatcaccatctgctgctccttcagctgctttgcaacgtccttggcggaggagcccgaga 1167 Query: 606 cttcaatccatgtttttgagaaga 629 | || ||||| || || ||||||| Sbjct: 1166 cctcgatccacgtcttggagaaga 1143
>ref|XM_424024.1| PREDICTED: Gallus gallus similar to Sec61 alpha isoform 2 (LOC426369), partial mRNA Length = 2070 Score = 65.9 bits (33), Expect = 2e-07 Identities = 66/77 (85%) Strand = Plus / Minus Query: 551 accatttgttgttccttcagctgcttagcgacatccttggctgatgaaccagagacttca 610 |||||||| ||||| || || ||||| || ||||| || |||||||||||||| |||||| Sbjct: 1392 accatttgctgttctttgagttgcttggcaacatcttttgctgatgaaccagacacttca 1333 Query: 611 atccatgtttttgagaa 627 ||||| || |||||||| Sbjct: 1332 atccaagtctttgagaa 1316
>gb|AY103473.1| Hemitripterus americanus Sec61-alpha mRNA, complete cds Length = 1536 Score = 65.9 bits (33), Expect = 2e-07 Identities = 123/153 (80%) Strand = Plus / Minus Query: 358 ctccttctcgaaggtctcaaagtactggtatatgatggtaacagccaacagaataccggt 417 ||||||| ||||| | |||||||||||||| ||||| || |||||||| || || || || Sbjct: 1451 ctccttcacgaagatttcaaagtactggtagatgattgtcacagccaagaggattcctgt 1392 Query: 418 tcctgaaccaattgcgcccatgaaatcagccagaacagtcaatgcaccgatgcatactcc 477 ||||||||||| || |||| ||| ||||||| |||| || | || ||||| | || Sbjct: 1391 acctgaaccaatggcacccaggaagtcagccatgacagacagccctcctatgcagaggcc 1332 Query: 478 accaaatgcagcagcagtagggatgtatctgtt 510 |||||| |||||||| || |||||||| ||||| Sbjct: 1331 accaaaggcagcagctgtggggatgtacctgtt 1299 Score = 46.1 bits (23), Expect = 0.14 Identities = 56/67 (83%) Strand = Plus / Minus Query: 563 tccttcagctgcttagcgacatccttggctgatgaaccagagacttcaatccatgttttt 622 |||||||||||||| || ||||| ||||| || || || ||||| |||||||| || || Sbjct: 1246 tccttcagctgcttcgccacatctttggccgaggatcctgagacctcaatccaggtcttg 1187 Query: 623 gagaaga 629 ||||||| Sbjct: 1186 gagaaga 1180
>gb|DQ416034.1| Acyrthosiphon pisum putative transport protein Sec61 alpha subunit mRNA, complete cds Length = 1431 Score = 65.9 bits (33), Expect = 2e-07 Identities = 78/93 (83%) Strand = Plus / Minus Query: 546 gcataaccatttgttgttccttcagctgcttagcgacatccttggctgatgaaccagaga 605 ||||||||||||||||||| || | || ||||| ||||| || || ||||| ||||||| Sbjct: 1204 gcataaccatttgttgttcttttaattgtttagcaacatctttagcagatgatccagaga 1145 Query: 606 cttcaatccatgtttttgagaagagagcacatg 638 |||||||||| ||||| || |||| ||||||| Sbjct: 1144 cttcaatccaagttttggaaaagaatgcacatg 1112 Score = 58.0 bits (29), Expect = 4e-05 Identities = 101/125 (80%) Strand = Plus / Minus Query: 374 tcaaagtactggtatatgatggtaacagccaacagaataccggttcctgaaccaattgcg 433 ||||| ||||||||||| || |||||||| ||||| ||||| || || || ||||| || Sbjct: 1376 tcaaaatactggtatataatagtaacagctaacaggatacccgtgcccgatccaatggca 1317 Query: 434 cccatgaaatcagccagaacagtcaatgcaccgatgcatactccaccaaatgcagcagca 493 |||||||| ||||||| |||| |||||||| || || | || ||||| || |||||| Sbjct: 1316 cccatgaagtcagccaacacagataatgcaccaatacaaagccctccaaacgctgcagca 1257 Query: 494 gtagg 498 ||||| Sbjct: 1256 gtagg 1252
>emb|CR391547.1| Gallus gallus finished cDNA, clone ChEST799f10 Length = 937 Score = 65.9 bits (33), Expect = 2e-07 Identities = 66/77 (85%) Strand = Plus / Minus Query: 551 accatttgttgttccttcagctgcttagcgacatccttggctgatgaaccagagacttca 610 |||||||| ||||| || || ||||| || ||||| || |||||||||||||| |||||| Sbjct: 514 accatttgctgttctttgagttgcttggcaacatcttttgctgatgaaccagacacttca 455 Query: 611 atccatgtttttgagaa 627 ||||| || |||||||| Sbjct: 454 atccaagtctttgagaa 438
>emb|CT033652.1| Platynereis dumerilii EST IB0AAA16CF07FM1 Length = 810 Score = 65.9 bits (33), Expect = 2e-07 Identities = 39/41 (95%) Strand = Plus / Plus Query: 476 ccaccaaatgcagcagcagtagggatgtatctgttcagttc 516 |||||||| |||||||||||||| ||||||||||||||||| Sbjct: 666 ccaccaaaagcagcagcagtaggaatgtatctgttcagttc 706 Score = 42.1 bits (21), Expect = 2.2 Identities = 33/37 (89%) Strand = Plus / Plus Query: 366 cgaaggtctcaaagtactggtatatgatggtaacagc 402 ||||| |||||||||||||||| ||||| || ||||| Sbjct: 556 cgaagatctcaaagtactggtagatgatcgttacagc 592
>emb|CT033490.1| Platynereis dumerilii EST IB0AAA19BF11EM1 Length = 925 Score = 65.9 bits (33), Expect = 2e-07 Identities = 39/41 (95%) Strand = Plus / Minus Query: 476 ccaccaaatgcagcagcagtagggatgtatctgttcagttc 516 |||||||| |||||||||||||| ||||||||||||||||| Sbjct: 448 ccaccaaaagcagcagcagtaggaatgtatctgttcagttc 408 Score = 42.1 bits (21), Expect = 2.2 Identities = 33/37 (89%) Strand = Plus / Minus Query: 366 cgaaggtctcaaagtactggtatatgatggtaacagc 402 ||||| |||||||||||||||| ||||| || ||||| Sbjct: 558 cgaagatctcaaagtactggtagatgatcgttacagc 522
>emb|CT033487.1| Platynereis dumerilii EST IB0AAA19BF12FM1 Length = 807 Score = 65.9 bits (33), Expect = 2e-07 Identities = 39/41 (95%) Strand = Plus / Plus Query: 476 ccaccaaatgcagcagcagtagggatgtatctgttcagttc 516 |||||||| |||||||||||||| ||||||||||||||||| Sbjct: 671 ccaccaaaagcagcagcagtaggaatgtatctgttcagttc 711 Score = 42.1 bits (21), Expect = 2.2 Identities = 33/37 (89%) Strand = Plus / Plus Query: 366 cgaaggtctcaaagtactggtatatgatggtaacagc 402 ||||| |||||||||||||||| ||||| || ||||| Sbjct: 561 cgaagatctcaaagtactggtagatgatcgttacagc 597
>emb|CT033432.1| Platynereis dumerilii EST IB0AAA20BF03FM1 Length = 823 Score = 65.9 bits (33), Expect = 2e-07 Identities = 39/41 (95%) Strand = Plus / Plus Query: 476 ccaccaaatgcagcagcagtagggatgtatctgttcagttc 516 |||||||| |||||||||||||| ||||||||||||||||| Sbjct: 673 ccaccaaaagcagcagcagtaggaatgtatctgttcagttc 713 Score = 42.1 bits (21), Expect = 2.2 Identities = 33/37 (89%) Strand = Plus / Plus Query: 366 cgaaggtctcaaagtactggtatatgatggtaacagc 402 ||||| |||||||||||||||| ||||| || ||||| Sbjct: 563 cgaagatctcaaagtactggtagatgatcgttacagc 599
>emb|CT033240.1| Platynereis dumerilii EST IB0AAA24BD10FM1 Length = 835 Score = 65.9 bits (33), Expect = 2e-07 Identities = 39/41 (95%) Strand = Plus / Plus Query: 476 ccaccaaatgcagcagcagtagggatgtatctgttcagttc 516 |||||||| |||||||||||||| ||||||||||||||||| Sbjct: 670 ccaccaaaagcagcagcagtaggaatgtatctgttcagttc 710 Score = 42.1 bits (21), Expect = 2.2 Identities = 33/37 (89%) Strand = Plus / Plus Query: 366 cgaaggtctcaaagtactggtatatgatggtaacagc 402 ||||| |||||||||||||||| ||||| || ||||| Sbjct: 560 cgaagatctcaaagtactggtagatgatcgttacagc 596
>emb|CT033061.1| Platynereis dumerilii EST IB0AAA27BF01FM1 Length = 829 Score = 65.9 bits (33), Expect = 2e-07 Identities = 39/41 (95%) Strand = Plus / Plus Query: 476 ccaccaaatgcagcagcagtagggatgtatctgttcagttc 516 |||||||| |||||||||||||| ||||||||||||||||| Sbjct: 669 ccaccaaaagcagcagcagtaggaatgtatctgttcagttc 709 Score = 42.1 bits (21), Expect = 2.2 Identities = 33/37 (89%) Strand = Plus / Plus Query: 366 cgaaggtctcaaagtactggtatatgatggtaacagc 402 ||||| |||||||||||||||| ||||| || ||||| Sbjct: 559 cgaagatctcaaagtactggtagatgatcgttacagc 595
>emb|CT032924.1| Platynereis dumerilii EST IB0AAA29CB07EM1 Length = 890 Score = 65.9 bits (33), Expect = 2e-07 Identities = 39/41 (95%) Strand = Plus / Minus Query: 476 ccaccaaatgcagcagcagtagggatgtatctgttcagttc 516 |||||||| |||||||||||||| ||||||||||||||||| Sbjct: 764 ccaccaaaagcagcagcagtaggaatgtatctgttcagttc 724 Score = 42.1 bits (21), Expect = 2.2 Identities = 33/37 (89%) Strand = Plus / Minus Query: 366 cgaaggtctcaaagtactggtatatgatggtaacagc 402 ||||| |||||||||||||||| ||||| || ||||| Sbjct: 874 cgaagatctcaaagtactggtagatgatcgttacagc 838
>emb|CT032824.1| Platynereis dumerilii EST IB0AAA30DC12FM1 Length = 836 Score = 65.9 bits (33), Expect = 2e-07 Identities = 39/41 (95%) Strand = Plus / Plus Query: 476 ccaccaaatgcagcagcagtagggatgtatctgttcagttc 516 |||||||| |||||||||||||| ||||||||||||||||| Sbjct: 671 ccaccaaaagcagcagcagtaggaatgtatctgttcagttc 711 Score = 42.1 bits (21), Expect = 2.2 Identities = 33/37 (89%) Strand = Plus / Plus Query: 366 cgaaggtctcaaagtactggtatatgatggtaacagc 402 ||||| |||||||||||||||| ||||| || ||||| Sbjct: 561 cgaagatctcaaagtactggtagatgatcgttacagc 597
>emb|CT032820.1| Platynereis dumerilii EST IB0AAA30DF04EM1 Length = 803 Score = 65.9 bits (33), Expect = 2e-07 Identities = 39/41 (95%) Strand = Plus / Minus Query: 476 ccaccaaatgcagcagcagtagggatgtatctgttcagttc 516 |||||||| |||||||||||||| ||||||||||||||||| Sbjct: 565 ccaccaaaagcagcagcagtaggaatgtatctgttcagttc 525 Score = 42.1 bits (21), Expect = 2.2 Identities = 33/37 (89%) Strand = Plus / Minus Query: 366 cgaaggtctcaaagtactggtatatgatggtaacagc 402 ||||| |||||||||||||||| ||||| || ||||| Sbjct: 675 cgaagatctcaaagtactggtagatgatcgttacagc 639
>ref|XM_660476.1| Cryptosporidium hominis TU502 Pfsec61 (Chro.70118) partial mRNA Length = 1422 Score = 63.9 bits (32), Expect = 6e-07 Identities = 77/92 (83%) Strand = Plus / Minus Query: 547 cataaccatttgttgttccttcagctgcttagcgacatccttggctgatgaaccagagac 606 ||||| ||||||||| || | ||||| || || |||||||| || || || ||||| || Sbjct: 1206 cataatcatttgttgatctctgagctgtttcgcaacatcctttgcagaagatccagatac 1147 Query: 607 ttcaatccatgtttttgagaagagagcacatg 638 ||||||||| ||||| |||||||||||||||| Sbjct: 1146 ttcaatccaagttttggagaagagagcacatg 1115 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Minus Query: 476 ccaccaaatgcagcagcagtagggatgta 504 |||||||| ||||||||||| |||||||| Sbjct: 1277 ccaccaaaggcagcagcagtggggatgta 1249
>ref|NM_001003315.1| Canis familiaris Sec61 alpha 1 subunit (S. cerevisiae) (SEC61A1), mRNA Length = 3391 Score = 61.9 bits (31), Expect = 2e-06 Identities = 67/79 (84%) Strand = Plus / Minus Query: 551 accatttgttgttccttcagctgcttagcgacatccttggctgatgaaccagagacttca 610 ||||| || ||||||||||||||||| || ||||| ||||| || || || ||||| ||| Sbjct: 1301 accatctgctgttccttcagctgctttgcaacatctttggcagaggagcccgagacctca 1242 Query: 611 atccatgtttttgagaaga 629 ||||| ||||| ||||||| Sbjct: 1241 atccaggttttggagaaga 1223 Score = 50.1 bits (25), Expect = 0.009 Identities = 64/77 (83%) Strand = Plus / Minus Query: 374 tcaaagtactggtatatgatggtaacagccaacagaataccggttcctgaaccaattgcg 433 |||||||||||||| ||||| || || |||| ||| || |||||||| || ||||| ||| Sbjct: 1478 tcaaagtactggtagatgattgtgactgccagcaggatcccggttccagacccaatggcg 1419 Query: 434 cccatgaaatcagccag 450 |||| ||| || ||||| Sbjct: 1418 cccaggaagtcggccag 1402
>gb|BC002951.1| Homo sapiens protein transport protein SEC61 alpha subunit isoform 1, mRNA (cDNA clone MGC:1086 IMAGE:3510682), complete cds Length = 3571 Score = 61.9 bits (31), Expect = 2e-06 Identities = 58/67 (86%) Strand = Plus / Minus Query: 563 tccttcagctgcttagcgacatccttggctgatgaaccagagacttcaatccatgttttt 622 |||||||||||||| || ||||| ||||| || ||||| ||||| |||||||| ||||| Sbjct: 1278 tccttcagctgctttgcaacatctttggcagaggaacctgagacctcaatccacgttttg 1219 Query: 623 gagaaga 629 ||||||| Sbjct: 1218 gagaaga 1212 Score = 50.1 bits (25), Expect = 0.009 Identities = 70/85 (82%) Strand = Plus / Minus Query: 366 cgaaggtctcaaagtactggtatatgatggtaacagccaacagaataccggttcctgaac 425 ||||| |||||||||||||||| ||||| || || || | ||| || |||||||| || | Sbjct: 1475 cgaagatctcaaagtactggtagatgattgtgactgcgagcaggatcccggttccagacc 1416 Query: 426 caattgcgcccatgaaatcagccag 450 |||| ||||| | ||| |||||||| Sbjct: 1415 caatggcgcctaggaagtcagccag 1391
>ref|XM_965057.1| PREDICTED: Tribolium castaneum similar to CG9539-PA (LOC658693), mRNA Length = 1943 Score = 61.9 bits (31), Expect = 2e-06 Identities = 67/79 (84%) Strand = Plus / Minus Query: 377 aagtactggtatatgatggtaacagccaacagaataccggttcctgaaccaattgcgccc 436 ||||||||||| || || || ||||||| || ||||||||| ||||||||||| || ||| Sbjct: 1521 aagtactggtaaataatagtgacagccagcaaaataccggtgcctgaaccaatcgcaccc 1462 Query: 437 atgaaatcagccagaacag 455 | |||||| |||| ||||| Sbjct: 1461 aagaaatcggccaaaacag 1443
>emb|AL831940.1|HSM803192 Homo sapiens mRNA; cDNA DKFZp313F1012 (from clone DKFZp313F1012) Length = 3055 Score = 61.9 bits (31), Expect = 2e-06 Identities = 58/67 (86%) Strand = Plus / Minus Query: 563 tccttcagctgcttagcgacatccttggctgatgaaccagagacttcaatccatgttttt 622 |||||||||||||| || ||||| ||||| || ||||| ||||| |||||||| ||||| Sbjct: 781 tccttcagctgctttgcaacatctttggcagaggaacctgagacctcaatccacgttttg 722 Query: 623 gagaaga 629 ||||||| Sbjct: 721 gagaaga 715 Score = 50.1 bits (25), Expect = 0.009 Identities = 70/85 (82%) Strand = Plus / Minus Query: 366 cgaaggtctcaaagtactggtatatgatggtaacagccaacagaataccggttcctgaac 425 ||||| |||||||||||||||| ||||| || || || | ||| || |||||||| || | Sbjct: 978 cgaagatctcaaagtactggtagatgattgtgactgcgagcaggatcccggttccagacc 919 Query: 426 caattgcgcccatgaaatcagccag 450 |||| ||||| | ||| |||||||| Sbjct: 918 caatggcgcctaggaagtcagccag 894
>gb|BC044351.1| Danio rerio SEC61, alpha subunit, mRNA (cDNA clone MGC:55256 IMAGE:3815921), complete cds Length = 2605 Score = 61.9 bits (31), Expect = 2e-06 Identities = 67/79 (84%) Strand = Plus / Minus Query: 551 accatttgttgttccttcagctgcttagcgacatccttggctgatgaaccagagacttca 610 ||||| || ||||| |||||||||||||| ||||| ||||| || || ||||| |||||| Sbjct: 1306 accatctgctgttctttcagctgcttagctacatctttggcagaagatccagaaacttca 1247 Query: 611 atccatgtttttgagaaga 629 ||||| || ||||| |||| Sbjct: 1246 atccaggtctttgaaaaga 1228 Score = 58.0 bits (29), Expect = 4e-05 Identities = 116/145 (80%) Strand = Plus / Minus Query: 372 tctcaaagtactggtatatgatggtaacagccaacagaataccggttcctgaaccaattg 431 ||||||||||||| || ||||||||||||||||| || || || ||||| || || || | Sbjct: 1485 tctcaaagtactgatagatgatggtaacagccaataggattcccgttccggagccgatgg 1426 Query: 432 cgcccatgaaatcagccagaacagtcaatgcaccgatgcatactccaccaaatgcagcag 491 |||||| ||| || |||| || | | | ||||| || | ||||||||||||||| | Sbjct: 1425 cgcccaggaagtccgccattactgaaaggcctccgatacacagtccaccaaatgcagccg 1366 Query: 492 cagtagggatgtatctgttcagttc 516 | || |||||||||||||| ||||| Sbjct: 1365 ctgtggggatgtatctgttgagttc 1341
>emb|AL832821.1|HSM804132 Homo sapiens mRNA; cDNA DKFZp667E1224 (from clone DKFZp667E1224) Length = 3600 Score = 61.9 bits (31), Expect = 2e-06 Identities = 58/67 (86%) Strand = Plus / Minus Query: 563 tccttcagctgcttagcgacatccttggctgatgaaccagagacttcaatccatgttttt 622 |||||||||||||| || ||||| ||||| || ||||| ||||| |||||||| ||||| Sbjct: 1304 tccttcagctgctttgcaacatctttggcagaggaacctgagacctcaatccacgttttg 1245 Query: 623 gagaaga 629 ||||||| Sbjct: 1244 gagaaga 1238 Score = 50.1 bits (25), Expect = 0.009 Identities = 70/85 (82%) Strand = Plus / Minus Query: 366 cgaaggtctcaaagtactggtatatgatggtaacagccaacagaataccggttcctgaac 425 ||||| |||||||||||||||| ||||| || || || | ||| || |||||||| || | Sbjct: 1501 cgaagatctcaaagtactggtagatgattgtgactgcgagcaggatcccggttccagacc 1442 Query: 426 caattgcgcccatgaaatcagccag 450 |||| ||||| | ||| |||||||| Sbjct: 1441 caatggcgcctaggaagtcagccag 1417
>gb|BC066715.1| Danio rerio SEC61, alpha subunit, mRNA (cDNA clone MGC:76848 IMAGE:6960771), complete cds Length = 2580 Score = 61.9 bits (31), Expect = 2e-06 Identities = 67/79 (84%) Strand = Plus / Minus Query: 551 accatttgttgttccttcagctgcttagcgacatccttggctgatgaaccagagacttca 610 ||||| || ||||| |||||||||||||| ||||| ||||| || || ||||| |||||| Sbjct: 1264 accatctgctgttctttcagctgcttagctacatctttggcagaagatccagaaacttca 1205 Query: 611 atccatgtttttgagaaga 629 ||||| || ||||| |||| Sbjct: 1204 atccaggtctttgaaaaga 1186 Score = 58.0 bits (29), Expect = 4e-05 Identities = 116/145 (80%) Strand = Plus / Minus Query: 372 tctcaaagtactggtatatgatggtaacagccaacagaataccggttcctgaaccaattg 431 ||||||||||||| || ||||||||||||||||| || || || ||||| || || || | Sbjct: 1443 tctcaaagtactgatagatgatggtaacagccaataggattcccgttccggagccgatgg 1384 Query: 432 cgcccatgaaatcagccagaacagtcaatgcaccgatgcatactccaccaaatgcagcag 491 |||||| ||| || |||| || | | | ||||| || | ||||||||||||||| | Sbjct: 1383 cgcccaggaagtccgccattactgaaaggcctccgatacacagtccaccaaatgcagccg 1324 Query: 492 cagtagggatgtatctgttcagttc 516 | || |||||||||||||| ||||| Sbjct: 1323 ctgtggggatgtatctgttgagttc 1299
>emb|CR860842.1| Pongo pygmaeus mRNA; cDNA DKFZp469H0814 (from clone DKFZp469H0814) Length = 3582 Score = 61.9 bits (31), Expect = 2e-06 Identities = 58/67 (86%) Strand = Plus / Minus Query: 563 tccttcagctgcttagcgacatccttggctgatgaaccagagacttcaatccatgttttt 622 |||||||||||||| || ||||| ||||| || ||||| ||||| |||||||| ||||| Sbjct: 1299 tccttcagctgctttgcaacatctttggcagaggaaccggagacctcaatccacgttttg 1240 Query: 623 gagaaga 629 ||||||| Sbjct: 1239 gagaaga 1233 Score = 58.0 bits (29), Expect = 4e-05 Identities = 71/85 (83%) Strand = Plus / Minus Query: 366 cgaaggtctcaaagtactggtatatgatggtaacagccaacagaataccggttcctgaac 425 ||||| |||||||||||||||| |||||||| || || | ||| || |||||||| || | Sbjct: 1496 cgaagatctcaaagtactggtagatgatggtgactgcgagcaggatcccggttccggacc 1437 Query: 426 caattgcgcccatgaaatcagccag 450 |||| || |||| ||| |||||||| Sbjct: 1436 caatggcacccaggaagtcagccag 1412
>emb|CR859335.1| Pongo pygmaeus mRNA; cDNA DKFZp469D1920 (from clone DKFZp469D1920) Length = 3576 Score = 61.9 bits (31), Expect = 2e-06 Identities = 58/67 (86%) Strand = Plus / Minus Query: 563 tccttcagctgcttagcgacatccttggctgatgaaccagagacttcaatccatgttttt 622 |||||||||||||| || ||||| ||||| || ||||| ||||| |||||||| ||||| Sbjct: 1298 tccttcagctgctttgcaacatctttggcagaggaaccggagacctcaatccacgttttg 1239 Query: 623 gagaaga 629 ||||||| Sbjct: 1238 gagaaga 1232 Score = 58.0 bits (29), Expect = 4e-05 Identities = 71/85 (83%) Strand = Plus / Minus Query: 366 cgaaggtctcaaagtactggtatatgatggtaacagccaacagaataccggttcctgaac 425 ||||| |||||||||||||||| |||||||| || || | ||| || |||||||| || | Sbjct: 1495 cgaagatctcaaagtactggtagatgatggtgactgcgagcaggatcccggttccggacc 1436 Query: 426 caattgcgcccatgaaatcagccag 450 |||| || |||| ||| |||||||| Sbjct: 1435 caatggcacccaggaagtcagccag 1411
>emb|CR860233.1| Pongo pygmaeus mRNA; cDNA DKFZp469P1019 (from clone DKFZp469P1019) Length = 2792 Score = 61.9 bits (31), Expect = 2e-06 Identities = 58/67 (86%) Strand = Plus / Minus Query: 563 tccttcagctgcttagcgacatccttggctgatgaaccagagacttcaatccatgttttt 622 |||||||||||||| || ||||| ||||| || ||||| ||||| |||||||| ||||| Sbjct: 519 tccttcagctgctttgcaacatctttggcagaggaaccggagacctcaatccacgttttg 460 Query: 623 gagaaga 629 ||||||| Sbjct: 459 gagaaga 453 Score = 58.0 bits (29), Expect = 4e-05 Identities = 71/85 (83%) Strand = Plus / Minus Query: 366 cgaaggtctcaaagtactggtatatgatggtaacagccaacagaataccggttcctgaac 425 ||||| |||||||||||||||| |||||||| || || | ||| || |||||||| || | Sbjct: 716 cgaagatctcaaagtactggtagatgatggtgactgcgagcaggatcccggttccggacc 657 Query: 426 caattgcgcccatgaaatcagccag 450 |||| || |||| ||| |||||||| Sbjct: 656 caatggcacccaggaagtcagccag 632
>emb|CR623601.1| full-length cDNA clone CS0DI026YB08 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1674 Score = 61.9 bits (31), Expect = 2e-06 Identities = 58/67 (86%) Strand = Plus / Minus Query: 563 tccttcagctgcttagcgacatccttggctgatgaaccagagacttcaatccatgttttt 622 |||||||||||||| || ||||| ||||| || ||||| ||||| |||||||| ||||| Sbjct: 1270 tccttcagctgctttgcaacatctttggcagaggaacctgagacctcaatccacgttttg 1211 Query: 623 gagaaga 629 ||||||| Sbjct: 1210 gagaaga 1204 Score = 50.1 bits (25), Expect = 0.009 Identities = 70/85 (82%) Strand = Plus / Minus Query: 366 cgaaggtctcaaagtactggtatatgatggtaacagccaacagaataccggttcctgaac 425 ||||| |||||||||||||||| ||||| || || || | ||| || |||||||| || | Sbjct: 1467 cgaagatctcaaagtactggtagatgattgtgactgcgagcaggatcccggttccagacc 1408 Query: 426 caattgcgcccatgaaatcagccag 450 |||| ||||| | ||| |||||||| Sbjct: 1407 caatggcgcctaggaagtcagccag 1383
>dbj|AK074928.1| Homo sapiens cDNA FLJ90447 fis, clone NT2RP3001240, highly similar to Canis familiaris sec61 homologue mRNA Length = 3238 Score = 61.9 bits (31), Expect = 2e-06 Identities = 58/67 (86%) Strand = Plus / Minus Query: 563 tccttcagctgcttagcgacatccttggctgatgaaccagagacttcaatccatgttttt 622 |||||||||||||| || ||||| ||||| || ||||| ||||| |||||||| ||||| Sbjct: 979 tccttcagctgctttgcaacatctttggcagaggaacctgagacctcaatccacgttttg 920 Query: 623 gagaaga 629 ||||||| Sbjct: 919 gagaaga 913 Score = 50.1 bits (25), Expect = 0.009 Identities = 70/85 (82%) Strand = Plus / Minus Query: 366 cgaaggtctcaaagtactggtatatgatggtaacagccaacagaataccggttcctgaac 425 ||||| |||||||||||||||| ||||| || || || | ||| || |||||||| || | Sbjct: 1176 cgaagatctcaaagtactggtagatgattgtgactgcgagcaggatcccggttccagacc 1117 Query: 426 caattgcgcccatgaaatcagccag 450 |||| ||||| | ||| |||||||| Sbjct: 1116 caatggcgcctaggaagtcagccag 1092
>dbj|AK074907.1| Homo sapiens cDNA FLJ90426 fis, clone NT2RP3000460, highly similar to Protein transport protein Sec61 alpha subunitisoform 1 Length = 2600 Score = 61.9 bits (31), Expect = 2e-06 Identities = 58/67 (86%) Strand = Plus / Minus Query: 563 tccttcagctgcttagcgacatccttggctgatgaaccagagacttcaatccatgttttt 622 |||||||||||||| || ||||| ||||| || ||||| ||||| |||||||| ||||| Sbjct: 341 tccttcagctgctttgcaacatctttggcagaggaacctgagacctcaatccacgttttg 282 Query: 623 gagaaga 629 ||||||| Sbjct: 281 gagaaga 275 Score = 50.1 bits (25), Expect = 0.009 Identities = 70/85 (82%) Strand = Plus / Minus Query: 366 cgaaggtctcaaagtactggtatatgatggtaacagccaacagaataccggttcctgaac 425 ||||| |||||||||||||||| ||||| || || || | ||| || |||||||| || | Sbjct: 538 cgaagatctcaaagtactggtagatgattgtgactgcgagcaggatcccggttccagacc 479 Query: 426 caattgcgcccatgaaatcagccag 450 |||| ||||| | ||| |||||||| Sbjct: 478 caatggcgcctaggaagtcagccag 454
>dbj|AK074706.1| Homo sapiens cDNA FLJ90225 fis, clone NT2RM1000855, highly similar to Protein transport protein Sec61 alpha subunitisoform 1 Length = 3635 Score = 61.9 bits (31), Expect = 2e-06 Identities = 58/67 (86%) Strand = Plus / Minus Query: 563 tccttcagctgcttagcgacatccttggctgatgaaccagagacttcaatccatgttttt 622 |||||||||||||| || ||||| ||||| || ||||| ||||| |||||||| ||||| Sbjct: 1371 tccttcagctgctttgcaacatctttggcagaggaacctgagacctcaatccacgttttg 1312 Query: 623 gagaaga 629 ||||||| Sbjct: 1311 gagaaga 1305 Score = 50.1 bits (25), Expect = 0.009 Identities = 70/85 (82%) Strand = Plus / Minus Query: 366 cgaaggtctcaaagtactggtatatgatggtaacagccaacagaataccggttcctgaac 425 ||||| |||||||||||||||| ||||| || || || | ||| || |||||||| || | Sbjct: 1568 cgaagatctcaaagtactggtagatgattgtgactgcgagcaggatcccggttccagacc 1509 Query: 426 caattgcgcccatgaaatcagccag 450 |||| ||||| | ||| |||||||| Sbjct: 1508 caatggcgcctaggaagtcagccag 1484
>dbj|AK075148.1| Homo sapiens cDNA FLJ90667 fis, clone PLACE1005410, highly similar to Protein transport protein Sec61 alpha subunitisoform 1 Length = 2633 Score = 61.9 bits (31), Expect = 2e-06 Identities = 58/67 (86%) Strand = Plus / Minus Query: 563 tccttcagctgcttagcgacatccttggctgatgaaccagagacttcaatccatgttttt 622 |||||||||||||| || ||||| ||||| || ||||| ||||| |||||||| ||||| Sbjct: 371 tccttcagctgctttgcaacatctttggcagaggaacctgagacctcaatccacgttttg 312 Query: 623 gagaaga 629 ||||||| Sbjct: 311 gagaaga 305 Score = 50.1 bits (25), Expect = 0.009 Identities = 70/85 (82%) Strand = Plus / Minus Query: 366 cgaaggtctcaaagtactggtatatgatggtaacagccaacagaataccggttcctgaac 425 ||||| |||||||||||||||| ||||| || || || | ||| || |||||||| || | Sbjct: 568 cgaagatctcaaagtactggtagatgattgtgactgcgagcaggatcccggttccagacc 509 Query: 426 caattgcgcccatgaaatcagccag 450 |||| ||||| | ||| |||||||| Sbjct: 508 caatggcgcctaggaagtcagccag 484
>dbj|AK027458.1| Homo sapiens cDNA FLJ14552 fis, clone NT2RM2001760, highly similar to Homo sapiens sec61 homolog mRNA Length = 2379 Score = 61.9 bits (31), Expect = 2e-06 Identities = 58/67 (86%) Strand = Plus / Minus Query: 563 tccttcagctgcttagcgacatccttggctgatgaaccagagacttcaatccatgttttt 622 |||||||||||||| || ||||| ||||| || ||||| ||||| |||||||| ||||| Sbjct: 116 tccttcagctgctttgcaacatctttggcagaggaacctgagacctcaatccacgttttg 57 Query: 623 gagaaga 629 ||||||| Sbjct: 56 gagaaga 50 Score = 50.1 bits (25), Expect = 0.009 Identities = 70/85 (82%) Strand = Plus / Minus Query: 366 cgaaggtctcaaagtactggtatatgatggtaacagccaacagaataccggttcctgaac 425 ||||| |||||||||||||||| ||||| || || || | ||| || |||||||| || | Sbjct: 313 cgaagatctcaaagtactggtagatgattgtgactgcgagcaggatcccggttccagacc 254 Query: 426 caattgcgcccatgaaatcagccag 450 |||| ||||| | ||| |||||||| Sbjct: 253 caatggcgcctaggaagtcagccag 229
>dbj|AK027454.1| Homo sapiens cDNA FLJ14548 fis, clone NT2RM2001648, highly similar to Homo sapiens sec61 homolog mRNA Length = 2421 Score = 61.9 bits (31), Expect = 2e-06 Identities = 58/67 (86%) Strand = Plus / Minus Query: 563 tccttcagctgcttagcgacatccttggctgatgaaccagagacttcaatccatgttttt 622 |||||||||||||| || ||||| ||||| || ||||| ||||| |||||||| ||||| Sbjct: 157 tccttcagctgctttgcaacatctttggcagaggaacctgagacctcaatccacgttttg 98 Query: 623 gagaaga 629 ||||||| Sbjct: 97 gagaaga 91 Score = 50.1 bits (25), Expect = 0.009 Identities = 70/85 (82%) Strand = Plus / Minus Query: 366 cgaaggtctcaaagtactggtatatgatggtaacagccaacagaataccggttcctgaac 425 ||||| |||||||||||||||| ||||| || || || | ||| || |||||||| || | Sbjct: 354 cgaagatctcaaagtactggtagatgattgtgactgcgagcaggatcccggttccagacc 295 Query: 426 caattgcgcccatgaaatcagccag 450 |||| ||||| | ||| |||||||| Sbjct: 294 caatggcgcctaggaagtcagccag 270
>dbj|AK027452.1| Homo sapiens cDNA FLJ14546 fis, clone NT2RM2001613, highly similar to Homo sapiens sec61 homolog mRNA Length = 2601 Score = 61.9 bits (31), Expect = 2e-06 Identities = 58/67 (86%) Strand = Plus / Minus Query: 563 tccttcagctgcttagcgacatccttggctgatgaaccagagacttcaatccatgttttt 622 |||||||||||||| || ||||| ||||| || ||||| ||||| |||||||| ||||| Sbjct: 337 tccttcagctgctttgcaacatctttggcagaggaacctgagacctcaatccacgttttg 278 Query: 623 gagaaga 629 ||||||| Sbjct: 277 gagaaga 271 Score = 50.1 bits (25), Expect = 0.009 Identities = 70/85 (82%) Strand = Plus / Minus Query: 366 cgaaggtctcaaagtactggtatatgatggtaacagccaacagaataccggttcctgaac 425 ||||| |||||||||||||||| ||||| || || || | ||| || |||||||| || | Sbjct: 534 cgaagatctcaaagtactggtagatgattgtgactgcgagcaggatcccggttccagacc 475 Query: 426 caattgcgcccatgaaatcagccag 450 |||| ||||| | ||| |||||||| Sbjct: 474 caatggcgcctaggaagtcagccag 450
>dbj|AK027423.1| Homo sapiens cDNA FLJ14517 fis, clone NT2RM1000833, highly similar to Homo sapiens sec61 homolog mRNA Length = 3635 Score = 61.9 bits (31), Expect = 2e-06 Identities = 58/67 (86%) Strand = Plus / Minus Query: 563 tccttcagctgcttagcgacatccttggctgatgaaccagagacttcaatccatgttttt 622 |||||||||||||| || ||||| ||||| || ||||| ||||| |||||||| ||||| Sbjct: 1371 tccttcagctgctttgcaacatctttggcagaggaacctgagacctcaatccacgttttg 1312 Query: 623 gagaaga 629 ||||||| Sbjct: 1311 gagaaga 1305 Score = 50.1 bits (25), Expect = 0.009 Identities = 70/85 (82%) Strand = Plus / Minus Query: 366 cgaaggtctcaaagtactggtatatgatggtaacagccaacagaataccggttcctgaac 425 ||||| |||||||||||||||| ||||| || || || | ||| || |||||||| || | Sbjct: 1568 cgaagatctcaaagtactggtagatgattgtgactgcgagcaggatcccggttccagacc 1509 Query: 426 caattgcgcccatgaaatcagccag 450 |||| ||||| | ||| |||||||| Sbjct: 1508 caatggcgcctaggaagtcagccag 1484
>dbj|AK001689.1| Homo sapiens cDNA FLJ10827 fis, clone NT2RP4001117, highly similar to PROTEIN TRANSPORT PROTEIN SEC61 ALPHA SUBUNIT Length = 2690 Score = 61.9 bits (31), Expect = 2e-06 Identities = 58/67 (86%) Strand = Plus / Minus Query: 563 tccttcagctgcttagcgacatccttggctgatgaaccagagacttcaatccatgttttt 622 |||||||||||||| || ||||| ||||| || ||||| ||||| |||||||| ||||| Sbjct: 431 tccttcagctgctttgcaacatctttggcagaggaacctgagacctcaatccacgttttg 372 Query: 623 gagaaga 629 ||||||| Sbjct: 371 gagaaga 365 Score = 50.1 bits (25), Expect = 0.009 Identities = 70/85 (82%) Strand = Plus / Minus Query: 366 cgaaggtctcaaagtactggtatatgatggtaacagccaacagaataccggttcctgaac 425 ||||| |||||||||||||||| ||||| || || || | ||| || |||||||| || | Sbjct: 628 cgaagatctcaaagtactggtagatgattgtgactgcgagcaggatcccggttccagacc 569 Query: 426 caattgcgcccatgaaatcagccag 450 |||| ||||| | ||| |||||||| Sbjct: 568 caatggcgcctaggaagtcagccag 544
>dbj|AB062670.1| Drosophila melanogaster mRNA for DSec61alpha, complete cds Length = 1984 Score = 61.9 bits (31), Expect = 2e-06 Identities = 55/63 (87%) Strand = Plus / Minus Query: 532 ctcgcgatggcctggcataaccatttgttgttccttcagctgcttagcgacatccttggc 591 |||||||||||| |||| ||||| || || |||||||||||||| || ||||||||||| Sbjct: 1306 ctcgcgatggccacgcatcaccatgtgctgctccttcagctgcttggcaacatccttggc 1247 Query: 592 tga 594 ||| Sbjct: 1246 tga 1244 Score = 54.0 bits (27), Expect = 6e-04 Identities = 39/43 (90%) Strand = Plus / Minus Query: 372 tctcaaagtactggtatatgatggtaacagccaacagaatacc 414 |||||||||| ||||| |||||||| ||||||||||| ||||| Sbjct: 1466 tctcaaagtattggtagatgatggtcacagccaacaggatacc 1424
>ref|NM_135190.3| Drosophila melanogaster Sec61 CG9539-RA (Sec61alpha), mRNA Length = 2046 Score = 61.9 bits (31), Expect = 2e-06 Identities = 55/63 (87%) Strand = Plus / Minus Query: 532 ctcgcgatggcctggcataaccatttgttgttccttcagctgcttagcgacatccttggc 591 |||||||||||| |||| ||||| || || |||||||||||||| || ||||||||||| Sbjct: 1377 ctcgcgatggccacgcatcaccatgtgctgctccttcagctgcttggcaacatccttggc 1318 Query: 592 tga 594 ||| Sbjct: 1317 tga 1315 Score = 54.0 bits (27), Expect = 6e-04 Identities = 39/43 (90%) Strand = Plus / Minus Query: 372 tctcaaagtactggtatatgatggtaacagccaacagaatacc 414 |||||||||| ||||| |||||||| ||||||||||| ||||| Sbjct: 1537 tctcaaagtattggtagatgatggtcacagccaacaggatacc 1495
>gb|AY064125.1| Aedes aegypti clone bR19Mc3 probable transport protein Sec61 alpha subunit (Sec61) mRNA, complete cds Length = 1962 Score = 61.9 bits (31), Expect = 2e-06 Identities = 67/79 (84%) Strand = Plus / Minus Query: 366 cgaaggtctcaaagtactggtatatgatggtaacagccaacagaataccggttcctgaac 425 ||||| |||| ||||||||||| |||||||| || |||| || ||||||||||| |||| Sbjct: 1525 cgaagatctcgaagtactggtagatgatggtgactgccagcaagataccggttccggaac 1466 Query: 426 caattgcgcccatgaaatc 444 | || || ||||||||||| Sbjct: 1465 cgatcgcacccatgaaatc 1447
>gb|AY064124.1| Aedes aegypti clone bR19Rc1 probable transport protein Sec61 alpha subunit (Sec61) mRNA, complete cds Length = 1962 Score = 61.9 bits (31), Expect = 2e-06 Identities = 67/79 (84%) Strand = Plus / Minus Query: 366 cgaaggtctcaaagtactggtatatgatggtaacagccaacagaataccggttcctgaac 425 ||||| |||| ||||||||||| |||||||| || |||| || ||||||||||| |||| Sbjct: 1525 cgaagatctcgaagtactggtagatgatggtgactgccagcaagataccggttccggaac 1466 Query: 426 caattgcgcccatgaaatc 444 | || || ||||||||||| Sbjct: 1465 cgatcgcacccatgaaatc 1447
>gb|AY069569.1| Drosophila melanogaster LD29847 full length cDNA Length = 1652 Score = 61.9 bits (31), Expect = 2e-06 Identities = 55/63 (87%) Strand = Plus / Minus Query: 532 ctcgcgatggcctggcataaccatttgttgttccttcagctgcttagcgacatccttggc 591 |||||||||||| |||| ||||| || || |||||||||||||| || ||||||||||| Sbjct: 1323 ctcgcgatggccacgcatcaccatgtgctgctccttcagctgcttggcaacatccttggc 1264 Query: 592 tga 594 ||| Sbjct: 1263 tga 1261 Score = 54.0 bits (27), Expect = 6e-04 Identities = 39/43 (90%) Strand = Plus / Minus Query: 372 tctcaaagtactggtatatgatggtaacagccaacagaatacc 414 |||||||||| ||||| |||||||| ||||||||||| ||||| Sbjct: 1483 tctcaaagtattggtagatgatggtcacagccaacaggatacc 1441
>gb|AF392805.1|AF392805 Aedes aegypti strain RED probable transport protein Sec61 alpha subunit (Sec61) mRNA, complete cds Length = 2018 Score = 61.9 bits (31), Expect = 2e-06 Identities = 67/79 (84%) Strand = Plus / Minus Query: 366 cgaaggtctcaaagtactggtatatgatggtaacagccaacagaataccggttcctgaac 425 ||||| |||| ||||||||||| |||||||| || |||| || ||||||||||| |||| Sbjct: 1555 cgaagatctcgaagtactggtagatgatggtgactgccagcaagataccggttccggaac 1496 Query: 426 caattgcgcccatgaaatc 444 | || || ||||||||||| Sbjct: 1495 cgatcgcacccatgaaatc 1477
>gb|AY029527.1| Danio rerio Sec61 alpha form A mRNA, complete cds Length = 2602 Score = 61.9 bits (31), Expect = 2e-06 Identities = 67/79 (84%) Strand = Plus / Minus Query: 551 accatttgttgttccttcagctgcttagcgacatccttggctgatgaaccagagacttca 610 ||||| || ||||| |||||||||||||| ||||| ||||| || || ||||| |||||| Sbjct: 1324 accatctgctgttctttcagctgcttagctacatctttggcagaagatccagaaacttca 1265 Query: 611 atccatgtttttgagaaga 629 ||||| || ||||| |||| Sbjct: 1264 atccaggtctttgaaaaga 1246 Score = 58.0 bits (29), Expect = 4e-05 Identities = 116/145 (80%) Strand = Plus / Minus Query: 372 tctcaaagtactggtatatgatggtaacagccaacagaataccggttcctgaaccaattg 431 ||||||||||||| || ||||||||||||||||| || || || ||||| || || || | Sbjct: 1503 tctcaaagtactgatagatgatggtaacagccaataggattcccgttccggagccgatgg 1444 Query: 432 cgcccatgaaatcagccagaacagtcaatgcaccgatgcatactccaccaaatgcagcag 491 |||||| ||| || |||| || | | | ||||| || | ||||||||||||||| | Sbjct: 1443 cgcccaggaagtccgccattactgaaaggcctccgatacacagtccaccaaatgcagccg 1384 Query: 492 cagtagggatgtatctgttcagttc 516 | || |||||||||||||| ||||| Sbjct: 1383 ctgtggggatgtatctgttgagttc 1359
>gb|AF346602.1|AF346602 Homo sapiens Sec61 alpha form 1 mRNA, complete cds Length = 1680 Score = 61.9 bits (31), Expect = 2e-06 Identities = 58/67 (86%) Strand = Plus / Minus Query: 563 tccttcagctgcttagcgacatccttggctgatgaaccagagacttcaatccatgttttt 622 |||||||||||||| || ||||| ||||| || ||||| ||||| |||||||| ||||| Sbjct: 1253 tccttcagctgctttgcaacatctttggcagaggaacctgagacctcaatccacgttttg 1194 Query: 623 gagaaga 629 ||||||| Sbjct: 1193 gagaaga 1187 Score = 50.1 bits (25), Expect = 0.009 Identities = 70/85 (82%) Strand = Plus / Minus Query: 366 cgaaggtctcaaagtactggtatatgatggtaacagccaacagaataccggttcctgaac 425 ||||| |||||||||||||||| ||||| || || || | ||| || |||||||| || | Sbjct: 1450 cgaagatctcaaagtactggtagatgattgtgactgcgagcaggatcccggttccagacc 1391 Query: 426 caattgcgcccatgaaatcagccag 450 |||| ||||| | ||| |||||||| Sbjct: 1390 caatggcgcctaggaagtcagccag 1366
>gb|AF326338.1|AF326338 Aedes aegypti strain MOYO-R putative transport protein Sec61 alpha subunit (Sec61) mRNA, complete cds Length = 2021 Score = 61.9 bits (31), Expect = 2e-06 Identities = 67/79 (84%) Strand = Plus / Minus Query: 366 cgaaggtctcaaagtactggtatatgatggtaacagccaacagaataccggttcctgaac 425 ||||| |||| ||||||||||| |||||||| || |||| || ||||||||||| |||| Sbjct: 1556 cgaagatctcgaagtactggtagatgatggtgactgccagcaagataccggttccggaac 1497 Query: 426 caattgcgcccatgaaatc 444 | || || ||||||||||| Sbjct: 1496 cgatcgcacccatgaaatc 1478
>ref|NM_153659.1| Danio rerio SEC61, alpha subunit (sec61a), mRNA Length = 2602 Score = 61.9 bits (31), Expect = 2e-06 Identities = 67/79 (84%) Strand = Plus / Minus Query: 551 accatttgttgttccttcagctgcttagcgacatccttggctgatgaaccagagacttca 610 ||||| || ||||| |||||||||||||| ||||| ||||| || || ||||| |||||| Sbjct: 1324 accatctgctgttctttcagctgcttagctacatctttggcagaagatccagaaacttca 1265 Query: 611 atccatgtttttgagaaga 629 ||||| || ||||| |||| Sbjct: 1264 atccaggtctttgaaaaga 1246 Score = 58.0 bits (29), Expect = 4e-05 Identities = 116/145 (80%) Strand = Plus / Minus Query: 372 tctcaaagtactggtatatgatggtaacagccaacagaataccggttcctgaaccaattg 431 ||||||||||||| || ||||||||||||||||| || || || ||||| || || || | Sbjct: 1503 tctcaaagtactgatagatgatggtaacagccaataggattcccgttccggagccgatgg 1444 Query: 432 cgcccatgaaatcagccagaacagtcaatgcaccgatgcatactccaccaaatgcagcag 491 |||||| ||| || |||| || | | | ||||| || | ||||||||||||||| | Sbjct: 1443 cgcccaggaagtccgccattactgaaaggcctccgatacacagtccaccaaatgcagccg 1384 Query: 492 cagtagggatgtatctgttcagttc 516 | || |||||||||||||| ||||| Sbjct: 1383 ctgtggggatgtatctgttgagttc 1359
>ref|NM_013336.3| Homo sapiens Sec61 alpha 1 subunit (S. cerevisiae) (SEC61A1), mRNA Length = 3656 Score = 61.9 bits (31), Expect = 2e-06 Identities = 58/67 (86%) Strand = Plus / Minus Query: 563 tccttcagctgcttagcgacatccttggctgatgaaccagagacttcaatccatgttttt 622 |||||||||||||| || ||||| ||||| || ||||| ||||| |||||||| ||||| Sbjct: 1371 tccttcagctgctttgcaacatctttggcagaggaacctgagacctcaatccacgttttg 1312 Query: 623 gagaaga 629 ||||||| Sbjct: 1311 gagaaga 1305 Score = 50.1 bits (25), Expect = 0.009 Identities = 70/85 (82%) Strand = Plus / Minus Query: 366 cgaaggtctcaaagtactggtatatgatggtaacagccaacagaataccggttcctgaac 425 ||||| |||||||||||||||| ||||| || || || | ||| || |||||||| || | Sbjct: 1568 cgaagatctcaaagtactggtagatgattgtgactgcgagcaggatcccggttccagacc 1509 Query: 426 caattgcgcccatgaaatcagccag 450 |||| ||||| | ||| |||||||| Sbjct: 1508 caatggcgcctaggaagtcagccag 1484
>gb|AF077032.1| Homo sapiens sec61 homolog mRNA, complete cds Length = 3561 Score = 61.9 bits (31), Expect = 2e-06 Identities = 58/67 (86%) Strand = Plus / Minus Query: 563 tccttcagctgcttagcgacatccttggctgatgaaccagagacttcaatccatgttttt 622 |||||||||||||| || ||||| ||||| || ||||| ||||| |||||||| ||||| Sbjct: 1277 tccttcagctgctttgcaacatctttggcagaggaacctgagacctcaatccacgttttg 1218 Query: 623 gagaaga 629 ||||||| Sbjct: 1217 gagaaga 1211 Score = 50.1 bits (25), Expect = 0.009 Identities = 70/85 (82%) Strand = Plus / Minus Query: 366 cgaaggtctcaaagtactggtatatgatggtaacagccaacagaataccggttcctgaac 425 ||||| |||||||||||||||| ||||| || || || | ||| || |||||||| || | Sbjct: 1474 cgaagatctcaaagtactggtagatgattgtgactgcgagcaggatcccggttccagacc 1415 Query: 426 caattgcgcccatgaaatcagccag 450 |||| ||||| | ||| |||||||| Sbjct: 1414 caatggcgcctaggaagtcagccag 1390
>gb|AF084458.1|HSEC61 Homo sapiens sec61 homolog mRNA, complete cds Length = 3561 Score = 61.9 bits (31), Expect = 2e-06 Identities = 58/67 (86%) Strand = Plus / Minus Query: 563 tccttcagctgcttagcgacatccttggctgatgaaccagagacttcaatccatgttttt 622 |||||||||||||| || ||||| ||||| || ||||| ||||| |||||||| ||||| Sbjct: 1277 tccttcagctgctttgcaacatctttggcagaggaacctgagacctcaatccacgttttg 1218 Query: 623 gagaaga 629 ||||||| Sbjct: 1217 gagaaga 1211 Score = 50.1 bits (25), Expect = 0.009 Identities = 70/85 (82%) Strand = Plus / Minus Query: 366 cgaaggtctcaaagtactggtatatgatggtaacagccaacagaataccggttcctgaac 425 ||||| |||||||||||||||| ||||| || || || | ||| || |||||||| || | Sbjct: 1474 cgaagatctcaaagtactggtagatgattgtgactgcgagcaggatcccggttccagacc 1415 Query: 426 caattgcgcccatgaaatcagccag 450 |||| ||||| | ||| |||||||| Sbjct: 1414 caatggcgcctaggaagtcagccag 1390
>dbj|D25536.1|HROSEC61P Halocynthia roretzi mRNA for HRSec61, complete cds Length = 2057 Score = 61.9 bits (31), Expect = 2e-06 Identities = 82/99 (82%) Strand = Plus / Minus Query: 406 cagaataccggttcctgaaccaattgcgcccatgaaatcagccagaacagtcaatgcacc 465 |||||| |||||||| |||||||| || || ||||||||||| || || | ||| || || Sbjct: 1391 cagaattccggttccggaaccaatggctcctatgaaatcagcgagtacggacaacgcgcc 1332 Query: 466 gatgcatactccaccaaatgcagcagcagtagggatgta 504 ||| |||| || || || |||||||||||||||||||| Sbjct: 1331 gatacataaacctccgaacgcagcagcagtagggatgta 1293
>gb|AY610173.1| Sus scrofa clone Clu_85032.scr.msk.p1.Contig1, mRNA sequence Length = 1950 Score = 61.9 bits (31), Expect = 2e-06 Identities = 58/67 (86%) Strand = Plus / Minus Query: 563 tccttcagctgcttagcgacatccttggctgatgaaccagagacttcaatccatgttttt 622 |||||||||||||| || ||||||||||| || || || ||||| |||||||| ||||| Sbjct: 1272 tccttcagctgctttgcaacatccttggcagaggagcctgagacctcaatccaggttttg 1213 Query: 623 gagaaga 629 ||||||| Sbjct: 1212 gagaaga 1206 Score = 58.0 bits (29), Expect = 4e-05 Identities = 107/133 (80%) Strand = Plus / Minus Query: 372 tctcaaagtactggtatatgatggtaacagccaacagaataccggttcctgaaccaattg 431 |||||||||||||||| ||||||||||| || | ||| || || ||||| || || || | Sbjct: 1463 tctcaaagtactggtagatgatggtaaccgcgagcaggatcccagttccagacccgatgg 1404 Query: 432 cgcccatgaaatcagccagaacagtcaatgcaccgatgcatactccaccaaatgcagcag 491 |||||| ||| |||||||| || | | || |||||||| | |||||||| || |||| Sbjct: 1403 cgcccaggaagtcagccaggacggagagggccccgatgcacagcccaccaaaggccgcag 1344 Query: 492 cagtagggatgta 504 |||| |||||||| Sbjct: 1343 cagtggggatgta 1331
>gb|M96629.1|DOGSEC61A Canis familiaris sec61 homologue mRNA, complete cds Length = 3391 Score = 61.9 bits (31), Expect = 2e-06 Identities = 67/79 (84%) Strand = Plus / Minus Query: 551 accatttgttgttccttcagctgcttagcgacatccttggctgatgaaccagagacttca 610 ||||| || ||||||||||||||||| || ||||| ||||| || || || ||||| ||| Sbjct: 1301 accatctgctgttccttcagctgctttgcaacatctttggcagaggagcccgagacctca 1242 Query: 611 atccatgtttttgagaaga 629 ||||| ||||| ||||||| Sbjct: 1241 atccaggttttggagaaga 1223 Score = 50.1 bits (25), Expect = 0.009 Identities = 64/77 (83%) Strand = Plus / Minus Query: 374 tcaaagtactggtatatgatggtaacagccaacagaataccggttcctgaaccaattgcg 433 |||||||||||||| ||||| || || |||| ||| || |||||||| || ||||| ||| Sbjct: 1478 tcaaagtactggtagatgattgtgactgccagcaggatcccggttccagacccaatggcg 1419 Query: 434 cccatgaaatcagccag 450 |||| ||| || ||||| Sbjct: 1418 cccaggaagtcggccag 1402
>dbj|AB032902.1| Mus musculus Sec61 mRNA, complete cds Length = 1804 Score = 61.9 bits (31), Expect = 2e-06 Identities = 58/67 (86%) Strand = Plus / Minus Query: 563 tccttcagctgcttagcgacatccttggctgatgaaccagagacttcaatccatgttttt 622 |||||||||||||| || ||||| ||||| || || || |||||||| ||||||||||| Sbjct: 1307 tccttcagctgctttgcaacatctttggcagaagagcctgagacttcgatccatgttttg 1248 Query: 623 gagaaga 629 ||||||| Sbjct: 1247 gagaaga 1241 Score = 46.1 bits (23), Expect = 0.14 Identities = 29/31 (93%) Strand = Plus / Minus Query: 366 cgaaggtctcaaagtactggtatatgatggt 396 ||||| |||||||||||||||| |||||||| Sbjct: 1504 cgaagatctcaaagtactggtagatgatggt 1474
>gb|BC094530.1| Rattus norvegicus Sec61 alpha 1 subunit (S. cerevisiae), mRNA (cDNA clone MGC:105264 IMAGE:7320508), complete cds Length = 3061 Score = 60.0 bits (30), Expect = 1e-05 Identities = 75/90 (83%) Strand = Plus / Minus Query: 366 cgaaggtctcaaagtactggtatatgatggtaacagccaacagaataccggttcctgaac 425 ||||| |||||||||||||||| |||||||| || |||| ||| || ||||| || || | Sbjct: 1491 cgaagatctcaaagtactggtagatgatggtgaccgccagcaggatcccggtgccagacc 1432 Query: 426 caattgcgcccatgaaatcagccagaacag 455 | || || |||| |||||||||||| |||| Sbjct: 1431 cgatagcacccaggaaatcagccaggacag 1402 Score = 54.0 bits (27), Expect = 6e-04 Identities = 51/59 (86%) Strand = Plus / Minus Query: 563 tccttcagctgcttagcgacatccttggctgatgaaccagagacttcaatccatgtttt 621 |||||||||||||| || ||||| ||||| || ||||| || ||||| ||||||||||| Sbjct: 1294 tccttcagctgcttggcaacatctttggcagaagaacccgaaacttcgatccatgtttt 1236
>ref|NM_199256.2| Rattus norvegicus Sec61 alpha 1 subunit (S. cerevisiae) (Sec61a1), mRNA Length = 3061 Score = 60.0 bits (30), Expect = 1e-05 Identities = 75/90 (83%) Strand = Plus / Minus Query: 366 cgaaggtctcaaagtactggtatatgatggtaacagccaacagaataccggttcctgaac 425 ||||| |||||||||||||||| |||||||| || |||| ||| || ||||| || || | Sbjct: 1491 cgaagatctcaaagtactggtagatgatggtgaccgccagcaggatcccggtgccagacc 1432 Query: 426 caattgcgcccatgaaatcagccagaacag 455 | || || |||| |||||||||||| |||| Sbjct: 1431 cgatagcacccaggaaatcagccaggacag 1402 Score = 54.0 bits (27), Expect = 6e-04 Identities = 51/59 (86%) Strand = Plus / Minus Query: 563 tccttcagctgcttagcgacatccttggctgatgaaccagagacttcaatccatgtttt 621 |||||||||||||| || ||||| ||||| || ||||| || ||||| ||||||||||| Sbjct: 1294 tccttcagctgcttggcaacatctttggcagaagaacccgaaacttcgatccatgtttt 1236
>gb|M96630.1|RATSEC61B Rattus sp. sec61-like protein mRNA, complete cds Length = 1738 Score = 60.0 bits (30), Expect = 1e-05 Identities = 75/90 (83%) Strand = Plus / Minus Query: 366 cgaaggtctcaaagtactggtatatgatggtaacagccaacagaataccggttcctgaac 425 ||||| |||||||||||||||| |||||||| || |||| ||| || ||||| || || | Sbjct: 1482 cgaagatctcaaagtactggtagatgatggtgaccgccagcaggatcccggtgccagacc 1423 Query: 426 caattgcgcccatgaaatcagccagaacag 455 | || || |||| |||||||||||| |||| Sbjct: 1422 cgatagcacccaggaaatcagccaggacag 1393 Score = 54.0 bits (27), Expect = 6e-04 Identities = 51/59 (86%) Strand = Plus / Minus Query: 563 tccttcagctgcttagcgacatccttggctgatgaaccagagacttcaatccatgtttt 621 |||||||||||||| || ||||| ||||| || ||||| || ||||| ||||||||||| Sbjct: 1285 tccttcagctgcttggcaacatctttggcagaagaacccgaaacttcgatccatgtttt 1227
>gb|AC073160.8| Homo sapiens chromosome 10 clone RP11-348G8, complete sequence Length = 189817 Score = 60.0 bits (30), Expect = 1e-05 Identities = 51/58 (87%) Strand = Plus / Minus Query: 581 acatccttggctgatgaaccagagacttcaatccatgtttttgagaagagagcacatg 638 ||||| |||||||| |||||||| |||||||||||||| || ||||||| ||||||| Sbjct: 158005 acatctttggctgaggaaccagacacttcaatccatgtcttagagaagaatgcacatg 157948
>gb|AY737549.1| Toxoptera citricida probable transport protein Sec61 alpha subunit mRNA, complete cds Length = 1431 Score = 58.0 bits (29), Expect = 4e-05 Identities = 101/125 (80%) Strand = Plus / Minus Query: 374 tcaaagtactggtatatgatggtaacagccaacagaataccggttcctgaaccaattgcg 433 ||||| ||||||||||| || |||||||| ||||| ||||| || || || ||||| || Sbjct: 1376 tcaaaatactggtatataatagtaacagctaacaggataccagtgcccgatccaatggca 1317 Query: 434 cccatgaaatcagccagaacagtcaatgcaccgatgcatactccaccaaatgcagcagca 493 |||||||| || |||| |||| | |||||| || |||| || |||||||| |||||| Sbjct: 1316 cccatgaagtctgccaatacagatagtgcaccaatacatagccctccaaatgctgcagca 1257 Query: 494 gtagg 498 ||||| Sbjct: 1256 gtagg 1252 Score = 58.0 bits (29), Expect = 4e-05 Identities = 77/93 (82%) Strand = Plus / Minus Query: 546 gcataaccatttgttgttccttcagctgcttagcgacatccttggctgatgaaccagaga 605 ||||||||||||||||||| || | || || || ||||| || || ||||| ||||||| Sbjct: 1204 gcataaccatttgttgttcttttaattgttttgcaacatctttagcagatgatccagaga 1145 Query: 606 cttcaatccatgtttttgagaagagagcacatg 638 |||||||||| ||||| || |||| ||||||| Sbjct: 1144 cttcaatccaagttttggaaaagaatgcacatg 1112
>gb|AY113841.1| Dissostichus mawsoni Sec61 (SEC61) mRNA, complete cds Length = 1441 Score = 56.0 bits (28), Expect = 1e-04 Identities = 64/76 (84%) Strand = Plus / Minus Query: 374 tcaaagtactggtatatgatggtaacagccaacagaataccggttcctgaaccaattgcg 433 |||||||||||||| |||||||| |||||||| || || || || || |||||||| || Sbjct: 1376 tcaaagtactggtagatgatggtcacagccaagaggattcctgtccccgaaccaatggcc 1317 Query: 434 cccatgaaatcagcca 449 |||| ||| ||||||| Sbjct: 1316 cccaggaagtcagcca 1301
>gb|AY103475.1| Gadus ogac Sec61-alpha mRNA, complete cds Length = 2483 Score = 56.0 bits (28), Expect = 1e-04 Identities = 61/72 (84%) Strand = Plus / Minus Query: 366 cgaaggtctcaaagtactggtatatgatggtaacagccaacagaataccggttcctgaac 425 ||||| |||||||||||||||| |||||||| || |||| ||| || ||||| ||||| | Sbjct: 1490 cgaagatctcaaagtactggtagatgatggtgacggccagcaggatgccggtgcctgagc 1431 Query: 426 caattgcgccca 437 | || ||||||| Sbjct: 1430 cgatggcgccca 1419
>gb|AY103472.1| Notothenia angustata Sec61-alpha mRNA, complete cds Length = 1549 Score = 56.0 bits (28), Expect = 1e-04 Identities = 64/76 (84%) Strand = Plus / Minus Query: 374 tcaaagtactggtatatgatggtaacagccaacagaataccggttcctgaaccaattgcg 433 |||||||||||||| |||||||| |||||||| || || || || || |||||||| || Sbjct: 1449 tcaaagtactggtagatgatggtcacagccaagaggattcctgtccccgaaccaatagcc 1390 Query: 434 cccatgaaatcagcca 449 |||| ||| ||||||| Sbjct: 1389 cccaggaagtcagcca 1374
>gb|AY103471.1| Pagothenia borchgrevinki Sec61-alpha mRNA, complete cds Length = 1550 Score = 56.0 bits (28), Expect = 1e-04 Identities = 64/76 (84%) Strand = Plus / Minus Query: 374 tcaaagtactggtatatgatggtaacagccaacagaataccggttcctgaaccaattgcg 433 |||||||||||||| |||||||| |||||||| || || || || || |||||||| || Sbjct: 1449 tcaaagtactggtagatgatggtcacagccaagaggattcctgtccccgaaccaatggcc 1390 Query: 434 cccatgaaatcagcca 449 |||| ||| ||||||| Sbjct: 1389 cccaggaagtcagcca 1374
>ref|XM_628281.1| Cryptosporidium parvum Iowa II putative Sec61 (cgd7_950), partial mRNA Length = 1422 Score = 56.0 bits (28), Expect = 1e-04 Identities = 76/92 (82%) Strand = Plus / Minus Query: 547 cataaccatttgttgttccttcagctgcttagcgacatccttggctgatgaaccagagac 606 ||||| ||||||||| || | || ||||| || |||||||| || || || ||||| || Sbjct: 1206 cataatcatttgttgatctctgagttgcttcgcaacatcctttgcagaagatccagatac 1147 Query: 607 ttcaatccatgtttttgagaagagagcacatg 638 ||| ||||| ||||| |||||||||||||||| Sbjct: 1146 ttcgatccaggttttggagaagagagcacatg 1115 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Minus Query: 476 ccaccaaatgcagcagcagtagggatgta 504 |||||||| ||||||||||| |||||||| Sbjct: 1277 ccaccaaaggcagcagcagtggggatgta 1249
>gb|AC011249.7| Drosophila melanogaster clone BACR37F23, complete sequence Length = 164973 Score = 54.0 bits (27), Expect = 6e-04 Identities = 39/43 (90%) Strand = Plus / Minus Query: 372 tctcaaagtactggtatatgatggtaacagccaacagaatacc 414 |||||||||| ||||| |||||||| ||||||||||| ||||| Sbjct: 83471 tctcaaagtattggtagatgatggtcacagccaacaggatacc 83429 Score = 42.1 bits (21), Expect = 2.2 Identities = 39/45 (86%) Strand = Plus / Minus Query: 532 ctcgcgatggcctggcataaccatttgttgttccttcagctgctt 576 |||||||||||| |||| ||||| || || |||||||||||||| Sbjct: 83311 ctcgcgatggccacgcatcaccatgtgctgctccttcagctgctt 83267
>gb|AC093100.2| Drosophila melanogaster clone BACR05J04, complete sequence Length = 214621 Score = 54.0 bits (27), Expect = 6e-04 Identities = 39/43 (90%) Strand = Plus / Minus Query: 372 tctcaaagtactggtatatgatggtaacagccaacagaatacc 414 |||||||||| ||||| |||||||| ||||||||||| ||||| Sbjct: 7136 tctcaaagtattggtagatgatggtcacagccaacaggatacc 7094 Score = 42.1 bits (21), Expect = 2.2 Identities = 39/45 (86%) Strand = Plus / Minus Query: 532 ctcgcgatggcctggcataaccatttgttgttccttcagctgctt 576 |||||||||||| |||| ||||| || || |||||||||||||| Sbjct: 6976 ctcgcgatggccacgcatcaccatgtgctgctccttcagctgctt 6932
>ref|XM_816127.1| Trypanosoma cruzi strain CL Brener pretranslocation protein, alpha subunit (Tc00.1047053510101.70) partial mRNA Length = 1446 Score = 54.0 bits (27), Expect = 6e-04 Identities = 39/43 (90%) Strand = Plus / Minus Query: 372 tctcaaagtactggtatatgatggtaacagccaacagaatacc 414 ||||||||||||||| || ||||| ||||||||||||||||| Sbjct: 1387 tctcaaagtactggttgatcatggtcacagccaacagaatacc 1345
>ref|XM_815115.1| Trypanosoma cruzi strain CL Brener pretranslocation protein, alpha subunit (Tc00.1047053506297.240) partial mRNA Length = 1446 Score = 54.0 bits (27), Expect = 6e-04 Identities = 39/43 (90%) Strand = Plus / Minus Query: 372 tctcaaagtactggtatatgatggtaacagccaacagaatacc 414 ||||||||||||||| || ||||| ||||||||||||||||| Sbjct: 1387 tctcaaagtactggttgatcatggtcacagccaacagaatacc 1345
>gb|AF346601.1|AF346601 Oncorhynchus mykiss Sec61 alpha form B mRNA, complete cds Length = 1528 Score = 54.0 bits (27), Expect = 6e-04 Identities = 45/51 (88%) Strand = Plus / Minus Query: 547 cataaccatttgttgttccttcagctgcttagcgacatccttggctgatga 597 ||||||||| ||||| ||||| ||||||||||| ||||| ||||| ||||| Sbjct: 1222 cataaccatctgttgctcctttagctgcttagccacatctttggcagatga 1172 Score = 48.1 bits (24), Expect = 0.036 Identities = 48/56 (85%) Strand = Plus / Minus Query: 374 tcaaagtactggtatatgatggtaacagccaacagaataccggttcctgaaccaat 429 |||||||||||||| |||||||| || |||| ||| ||||| ||||| || ||||| Sbjct: 1395 tcaaagtactggtagatgatggtgacggccagcaggatacccgttcccgagccaat 1340
>gb|AF346600.1|AF346600 Oncorhynchus mykiss Sec61 alpha form A mRNA, complete cds Length = 1643 Score = 54.0 bits (27), Expect = 6e-04 Identities = 66/79 (83%) Strand = Plus / Minus Query: 551 accatttgttgttccttcagctgcttagcgacatccttggctgatgaaccagagacttca 610 ||||| || |||||||||||||||||||| ||||| ||||| || || || || || || Sbjct: 1244 accatctgctgttccttcagctgcttagccacatctttggcagaggatcccgaaacctcg 1185 Query: 611 atccatgtttttgagaaga 629 |||||||| || ||||||| Sbjct: 1184 atccatgtcttggagaaga 1166 Score = 50.1 bits (25), Expect = 0.009 Identities = 115/145 (79%) Strand = Plus / Minus Query: 366 cgaaggtctcaaagtactggtatatgatggtaacagccaacagaataccggttcctgaac 425 ||||| |||||||||||||||| |||||||| || ||||| || || || || || |||| Sbjct: 1429 cgaagatctcaaagtactggtagatgatggtgacggccaataggattccagtacccgaac 1370 Query: 426 caattgcgcccatgaaatcagccagaacagtcaatgcaccgatgcatactccaccaaatg 485 | || || |||| ||| ||||||| |||| || |||| ||||||| ||||| || | Sbjct: 1369 cgatggcacccaggaagtcagccatgacagacagcccacctatgcataggccaccgaagg 1310 Query: 486 cagcagcagtagggatgtatctgtt 510 | ||||| || |||||||| ||||| Sbjct: 1309 ctgcagccgtggggatgtacctgtt 1285
>gb|AY967531.1| Schmidtea mediterranea clone HE.3.12B mRNA sequence Length = 948 Score = 54.0 bits (27), Expect = 6e-04 Identities = 39/43 (90%) Strand = Plus / Plus Query: 546 gcataaccatttgttgttccttcagctgcttagcgacatcctt 588 |||| |||||||||||||| |||| |||||| ||||||||||| Sbjct: 427 gcatcaccatttgttgttctttcaactgcttcgcgacatcctt 469
>gb|AE003613.4| Drosophila melanogaster chromosome 2L, section 22 of 83 of the complete sequence Length = 280095 Score = 54.0 bits (27), Expect = 6e-04 Identities = 39/43 (90%) Strand = Plus / Plus Query: 372 tctcaaagtactggtatatgatggtaacagccaacagaatacc 414 |||||||||| ||||| |||||||| ||||||||||| ||||| Sbjct: 260736 tctcaaagtattggtagatgatggtcacagccaacaggatacc 260778 Score = 42.1 bits (21), Expect = 2.2 Identities = 39/45 (86%) Strand = Plus / Plus Query: 532 ctcgcgatggcctggcataaccatttgttgttccttcagctgctt 576 |||||||||||| |||| ||||| || || |||||||||||||| Sbjct: 260896 ctcgcgatggccacgcatcaccatgtgctgctccttcagctgctt 260940
>gb|AY066163.1| Schmidtea mediterranea clone H.22.10b unknown mRNA sequence Length = 988 Score = 54.0 bits (27), Expect = 6e-04 Identities = 39/43 (90%) Strand = Plus / Plus Query: 546 gcataaccatttgttgttccttcagctgcttagcgacatcctt 588 |||| |||||||||||||| |||| |||||| ||||||||||| Sbjct: 426 gcatcaccatttgttgttctttcaactgcttcgcgacatcctt 468
>ref|NM_201577.1| Danio rerio SEC61, beta subunit (sec61b), mRNA Length = 2550 Score = 50.1 bits (25), Expect = 0.009 Identities = 55/65 (84%) Strand = Plus / Minus Query: 359 tccttctcgaaggtctcaaagtactggtatatgatggtaacagccaacagaataccggtt 418 |||||| | ||| |||||||||||||||| ||||| || || ||||||| ||| || ||| Sbjct: 1459 tccttcacaaagatctcaaagtactggtagatgatagtgacggccaacaaaattccagtt 1400 Query: 419 cctga 423 ||||| Sbjct: 1399 cctga 1395 Score = 46.1 bits (23), Expect = 0.14 Identities = 65/79 (82%) Strand = Plus / Minus Query: 551 accatttgttgttccttcagctgcttagcgacatccttggctgatgaaccagagacttca 610 ||||| || ||||| || ||||| || || ||||| ||||| ||||| || || |||||| Sbjct: 1267 accatctgctgttctttaagctgtttggcaacatctttggcagatgatccggaaacttca 1208 Query: 611 atccatgtttttgagaaga 629 ||||| || |||||||||| Sbjct: 1207 atccaggtctttgagaaga 1189
>ref|XM_875170.1| PREDICTED: Bos taurus similar to Sec61, alpha subunit 2, transcript variant 11 (LOC614128), mRNA Length = 2468 Score = 50.1 bits (25), Expect = 0.009 Identities = 46/53 (86%) Strand = Plus / Minus Query: 551 accatttgttgttccttcagctgcttagcgacatccttggctgatgaaccaga 603 |||||||||||||| || ||||| ||||| ||||| || ||||| |||||||| Sbjct: 1324 accatttgttgttctttaagctgtttagctacatcttttgctgaggaaccaga 1272
>ref|XM_875091.1| PREDICTED: Bos taurus similar to Sec61, alpha subunit 2, transcript variant 10 (LOC614128), mRNA Length = 2477 Score = 50.1 bits (25), Expect = 0.009 Identities = 46/53 (86%) Strand = Plus / Minus Query: 551 accatttgttgttccttcagctgcttagcgacatccttggctgatgaaccaga 603 |||||||||||||| || ||||| ||||| ||||| || ||||| |||||||| Sbjct: 1333 accatttgttgttctttaagctgtttagctacatcttttgctgaggaaccaga 1281
>ref|XM_875004.1| PREDICTED: Bos taurus similar to Sec61, alpha subunit 2, transcript variant 9 (LOC614128), mRNA Length = 2474 Score = 50.1 bits (25), Expect = 0.009 Identities = 46/53 (86%) Strand = Plus / Minus Query: 551 accatttgttgttccttcagctgcttagcgacatccttggctgatgaaccaga 603 |||||||||||||| || ||||| ||||| ||||| || ||||| |||||||| Sbjct: 1330 accatttgttgttctttaagctgtttagctacatcttttgctgaggaaccaga 1278
>ref|XM_874932.1| PREDICTED: Bos taurus similar to Sec61, alpha subunit 2, transcript variant 8 (LOC614128), mRNA Length = 2492 Score = 50.1 bits (25), Expect = 0.009 Identities = 46/53 (86%) Strand = Plus / Minus Query: 551 accatttgttgttccttcagctgcttagcgacatccttggctgatgaaccaga 603 |||||||||||||| || ||||| ||||| ||||| || ||||| |||||||| Sbjct: 1348 accatttgttgttctttaagctgtttagctacatcttttgctgaggaaccaga 1296
>ref|XM_874850.1| PREDICTED: Bos taurus similar to Sec61, alpha subunit 2, transcript variant 7 (LOC614128), mRNA Length = 2474 Score = 50.1 bits (25), Expect = 0.009 Identities = 46/53 (86%) Strand = Plus / Minus Query: 551 accatttgttgttccttcagctgcttagcgacatccttggctgatgaaccaga 603 |||||||||||||| || ||||| ||||| ||||| || ||||| |||||||| Sbjct: 1330 accatttgttgttctttaagctgtttagctacatcttttgctgaggaaccaga 1278
>ref|XM_874762.1| PREDICTED: Bos taurus similar to Sec61, alpha subunit 2, transcript variant 6 (LOC614128), mRNA Length = 2477 Score = 50.1 bits (25), Expect = 0.009 Identities = 46/53 (86%) Strand = Plus / Minus Query: 551 accatttgttgttccttcagctgcttagcgacatccttggctgatgaaccaga 603 |||||||||||||| || ||||| ||||| ||||| || ||||| |||||||| Sbjct: 1333 accatttgttgttctttaagctgtttagctacatcttttgctgaggaaccaga 1281
>ref|XM_874677.1| PREDICTED: Bos taurus similar to Sec61, alpha subunit 2, transcript variant 5 (LOC614128), mRNA Length = 2282 Score = 50.1 bits (25), Expect = 0.009 Identities = 46/53 (86%) Strand = Plus / Minus Query: 551 accatttgttgttccttcagctgcttagcgacatccttggctgatgaaccaga 603 |||||||||||||| || ||||| ||||| ||||| || ||||| |||||||| Sbjct: 1138 accatttgttgttctttaagctgtttagctacatcttttgctgaggaaccaga 1086
>ref|XM_874591.1| PREDICTED: Bos taurus similar to Sec61, alpha subunit 2, transcript variant 4 (LOC614128), mRNA Length = 2165 Score = 50.1 bits (25), Expect = 0.009 Identities = 46/53 (86%) Strand = Plus / Minus Query: 551 accatttgttgttccttcagctgcttagcgacatccttggctgatgaaccaga 603 |||||||||||||| || ||||| ||||| ||||| || ||||| |||||||| Sbjct: 1021 accatttgttgttctttaagctgtttagctacatcttttgctgaggaaccaga 969
>ref|XM_864860.1| PREDICTED: Bos taurus similar to Sec61, alpha subunit 2, transcript variant 1 (LOC614128), mRNA Length = 2480 Score = 50.1 bits (25), Expect = 0.009 Identities = 46/53 (86%) Strand = Plus / Minus Query: 551 accatttgttgttccttcagctgcttagcgacatccttggctgatgaaccaga 603 |||||||||||||| || ||||| ||||| ||||| || ||||| |||||||| Sbjct: 1336 accatttgttgttctttaagctgtttagctacatcttttgctgaggaaccaga 1284
>ref|XM_874348.1| PREDICTED: Bos taurus similar to Sec61, alpha subunit 2, transcript variant 2 (LOC614128), mRNA Length = 1893 Score = 50.1 bits (25), Expect = 0.009 Identities = 46/53 (86%) Strand = Plus / Minus Query: 551 accatttgttgttccttcagctgcttagcgacatccttggctgatgaaccaga 603 |||||||||||||| || ||||| ||||| ||||| || ||||| |||||||| Sbjct: 749 accatttgttgttctttaagctgtttagctacatcttttgctgaggaaccaga 697
>emb|BX957236.8| Zebrafish DNA sequence from clone DKEY-178O3 in linkage group 6, complete sequence Length = 211391 Score = 50.1 bits (25), Expect = 0.009 Identities = 55/65 (84%) Strand = Plus / Minus Query: 359 tccttctcgaaggtctcaaagtactggtatatgatggtaacagccaacagaataccggtt 418 |||||| | ||| |||||||||||||||| ||||| || || ||||||| ||| || ||| Sbjct: 82818 tccttcacaaagatctcaaagtactggtagatgatagtgacggccaacaaaattccagtt 82759 Query: 419 cctga 423 ||||| Sbjct: 82758 cctga 82754 Score = 42.1 bits (21), Expect = 2.2 Identities = 42/49 (85%) Strand = Plus / Minus Query: 581 acatccttggctgatgaaccagagacttcaatccatgtttttgagaaga 629 ||||| ||||| ||||| || || ||||||||||| || |||||||||| Sbjct: 81994 acatctttggcagatgatccggaaacttcaatccaggtctttgagaaga 81946
>gb|BC112848.1| Bos taurus similar to Sec61, alpha subunit 2, transcript variant 1, mRNA (cDNA clone MGC:137488 IMAGE:8168173), complete cds Length = 1924 Score = 50.1 bits (25), Expect = 0.009 Identities = 46/53 (86%) Strand = Plus / Minus Query: 551 accatttgttgttccttcagctgcttagcgacatccttggctgatgaaccaga 603 |||||||||||||| || ||||| ||||| ||||| || ||||| |||||||| Sbjct: 1309 accatttgttgttctttaagctgtttagctacatcttttgctgaggaaccaga 1257
>gb|AY103474.1| Boreogadus saida Sec61-alpha mRNA, complete cds Length = 2472 Score = 50.1 bits (25), Expect = 0.009 Identities = 43/49 (87%) Strand = Plus / Minus Query: 366 cgaaggtctcaaagtactggtatatgatggtaacagccaacagaatacc 414 ||||| ||||||||||||| || |||||||| |||||||| || ||||| Sbjct: 1470 cgaagatctcaaagtactgatagatgatggtcacagccaagaggatacc 1422
>emb|BX027220.1|CNS08T60 Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA40DB10 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 628 Score = 50.1 bits (25), Expect = 0.009 Identities = 70/85 (82%) Strand = Plus / Minus Query: 366 cgaaggtctcaaagtactggtatatgatggtaacagccaacagaataccggttcctgaac 425 ||||| |||| ||||||||||| |||||||| || |||| ||| |||||||| || || | Sbjct: 326 cgaagatctcgaagtactggtagatgatggtgacggccagcaggataccggtgccggagc 267 Query: 426 caattgcgcccatgaaatcagccag 450 | || || |||||||| || ||||| Sbjct: 266 cgatcgcacccatgaagtcggccag 242
>gb|AC149225.18| Danio rerio clone ch211-103f17, complete sequence Length = 185038 Score = 50.1 bits (25), Expect = 0.009 Identities = 55/65 (84%) Strand = Plus / Plus Query: 359 tccttctcgaaggtctcaaagtactggtatatgatggtaacagccaacagaataccggtt 418 |||||| | ||| |||||||||||||||| ||||| || || ||||||| ||| || ||| Sbjct: 86226 tccttcacaaagatctcaaagtactggtagatgatagtgacggccaacaaaattccagtt 86285 Query: 419 cctga 423 ||||| Sbjct: 86286 cctga 86290 Score = 42.1 bits (21), Expect = 2.2 Identities = 42/49 (85%) Strand = Plus / Plus Query: 581 acatccttggctgatgaaccagagacttcaatccatgtttttgagaaga 629 ||||| ||||| ||||| || || ||||||||||| || |||||||||| Sbjct: 87050 acatctttggcagatgatccggaaacttcaatccaggtctttgagaaga 87098
>gb|AY034614.1| Danio rerio Sec61 alpha form B mRNA, complete cds Length = 2550 Score = 50.1 bits (25), Expect = 0.009 Identities = 55/65 (84%) Strand = Plus / Minus Query: 359 tccttctcgaaggtctcaaagtactggtatatgatggtaacagccaacagaataccggtt 418 |||||| | ||| |||||||||||||||| ||||| || || ||||||| ||| || ||| Sbjct: 1459 tccttcacaaagatctcaaagtactggtagatgatagtgacggccaacaaaattccagtt 1400 Query: 419 cctga 423 ||||| Sbjct: 1399 cctga 1395 Score = 46.1 bits (23), Expect = 0.14 Identities = 65/79 (82%) Strand = Plus / Minus Query: 551 accatttgttgttccttcagctgcttagcgacatccttggctgatgaaccagagacttca 610 ||||| || ||||| || ||||| || || ||||| ||||| ||||| || || |||||| Sbjct: 1267 accatctgctgttctttaagctgtttggcaacatctttggcagatgatccggaaacttca 1208 Query: 611 atccatgtttttgagaaga 629 ||||| || |||||||||| Sbjct: 1207 atccaggtctttgagaaga 1189
>dbj|AK054318.1| Mus musculus 2 days pregnant adult female ovary cDNA, RIKEN full-length enriched library, clone:E330014L21 product:SEC61, alpha subunit (S. cerevisiae), full insert sequence Length = 2525 Score = 50.1 bits (25), Expect = 0.009 Identities = 43/49 (87%) Strand = Plus / Minus Query: 581 acatccttggctgatgaaccagagacttcaatccatgtttttgagaaga 629 ||||| ||||| || ||||| |||||||| ||||||||||| ||||||| Sbjct: 2113 acatctttggcagaagaacctgagacttcgatccatgttttggagaaga 2065
>gb|AC154038.1| Mus musculus 6 BAC RP23-49L8 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 213878 Score = 50.1 bits (25), Expect = 0.009 Identities = 43/49 (87%) Strand = Plus / Plus Query: 581 acatccttggctgatgaaccagagacttcaatccatgtttttgagaaga 629 ||||| ||||| || ||||| |||||||| ||||||||||| ||||||| Sbjct: 80736 acatctttggcagaagaacctgagacttcgatccatgttttggagaaga 80784 Score = 46.1 bits (23), Expect = 0.14 Identities = 29/31 (93%) Strand = Plus / Plus Query: 366 cgaaggtctcaaagtactggtatatgatggt 396 ||||| |||||||||||||||| |||||||| Sbjct: 79151 cgaagatctcaaagtactggtagatgatggt 79181
>dbj|AK129816.1| Homo sapiens cDNA FLJ26305 fis, clone DMC07965 Length = 2174 Score = 50.1 bits (25), Expect = 0.009 Identities = 70/85 (82%) Strand = Plus / Minus Query: 366 cgaaggtctcaaagtactggtatatgatggtaacagccaacagaataccggttcctgaac 425 ||||| |||||||||||||||| ||||| || || || | ||| || |||||||| || | Sbjct: 107 cgaagatctcaaagtactggtagatgattgtgactgcgagcaggatcccggttccagacc 48 Query: 426 caattgcgcccatgaaatcagccag 450 |||| ||||| | ||| |||||||| Sbjct: 47 caatggcgcctaggaagtcagccag 23
>ref|XM_319948.2| Anopheles gambiae str. PEST ENSANGP00000016786 (ENSANGG00000014297), partial mRNA Length = 1431 Score = 50.1 bits (25), Expect = 0.009 Identities = 70/85 (82%) Strand = Plus / Minus Query: 366 cgaaggtctcaaagtactggtatatgatggtaacagccaacagaataccggttcctgaac 425 ||||| |||| ||||||||||| |||||||| || |||| ||| |||||||| || || | Sbjct: 1384 cgaagatctcgaagtactggtagatgatggtgacggccagcaggataccggtgccggagc 1325 Query: 426 caattgcgcccatgaaatcagccag 450 | || || |||||||| || ||||| Sbjct: 1324 cgatcgcacccatgaagtcggccag 1300 Score = 40.1 bits (20), Expect = 8.8 Identities = 50/60 (83%) Strand = Plus / Minus Query: 532 ctcgcgatggcctggcataaccatttgttgttccttcagctgcttagcgacatccttggc 591 |||||| ||||| |||| ||||| || || |||||||||||||| || || |||||||| Sbjct: 1218 ctcgcggtggccgcgcatcaccatctgctgctccttcagctgcttcgccacgtccttggc 1159
>gb|BC048881.1| Danio rerio SEC61, beta subunit, mRNA (cDNA clone MGC:55672 IMAGE:3815496), complete cds Length = 2396 Score = 50.1 bits (25), Expect = 0.009 Identities = 55/65 (84%) Strand = Plus / Minus Query: 359 tccttctcgaaggtctcaaagtactggtatatgatggtaacagccaacagaataccggtt 418 |||||| | ||| |||||||||||||||| ||||| || || ||||||| ||| || ||| Sbjct: 1460 tccttcacaaagatctcaaagtactggtagatgatagtgacggccaacaaaattccagtt 1401 Query: 419 cctga 423 ||||| Sbjct: 1400 cctga 1396 Score = 46.1 bits (23), Expect = 0.14 Identities = 65/79 (82%) Strand = Plus / Minus Query: 551 accatttgttgttccttcagctgcttagcgacatccttggctgatgaaccagagacttca 610 ||||| || ||||| || ||||| || || ||||| ||||| ||||| || || |||||| Sbjct: 1268 accatctgctgttctttaagctgtttggcaacatctttggcagatgatccggaaacttca 1209 Query: 611 atccatgtttttgagaaga 629 ||||| || |||||||||| Sbjct: 1208 atccaggtctttgagaaga 1190
>gb|AC011311.11| Homo sapiens 3 BAC RP11-525K18 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 187628 Score = 50.1 bits (25), Expect = 0.009 Identities = 70/85 (82%) Strand = Plus / Plus Query: 366 cgaaggtctcaaagtactggtatatgatggtaacagccaacagaataccggttcctgaac 425 ||||| |||||||||||||||| ||||| || || || | ||| || |||||||| || | Sbjct: 10791 cgaagatctcaaagtactggtagatgattgtgactgcgagcaggatcccggttccagacc 10850 Query: 426 caattgcgcccatgaaatcagccag 450 |||| ||||| | ||| |||||||| Sbjct: 10851 caatggcgcctaggaagtcagccag 10875
>ref|XM_535191.2| PREDICTED: Canis familiaris similar to Sec61, alpha subunit 2 (LOC478007), mRNA Length = 2026 Score = 48.1 bits (24), Expect = 0.036 Identities = 57/68 (83%) Strand = Plus / Minus Query: 551 accatttgttgttccttcagctgcttagcgacatccttggctgatgaaccagagacttca 610 |||||||| ||||| || ||||||||||| ||||| || || || |||||||| || || Sbjct: 1424 accatttgctgttctttaagctgcttagctacatctttagcagaggaaccagacacctct 1365 Query: 611 atccatgt 618 |||||||| Sbjct: 1364 atccatgt 1357
>gb|AY103476.1| Bovichtus variegatus Sec61-alpha mRNA, complete cds Length = 1551 Score = 48.1 bits (24), Expect = 0.036 Identities = 63/76 (82%) Strand = Plus / Minus Query: 374 tcaaagtactggtatatgatggtaacagccaacagaataccggttcctgaaccaattgcg 433 |||||||||||||| ||||| || |||||||| || || || || || |||||||| || Sbjct: 1450 tcaaagtactggtagatgattgtcacagccaaaaggattcctgtacccgaaccaatggca 1391 Query: 434 cccatgaaatcagcca 449 |||| ||| ||||||| Sbjct: 1390 cccaggaagtcagcca 1375 Score = 46.1 bits (23), Expect = 0.14 Identities = 56/67 (83%) Strand = Plus / Minus Query: 563 tccttcagctgcttagcgacatccttggctgatgaaccagagacttcaatccatgttttt 622 |||||||||||||| || ||||| ||||| || || || ||||| |||||||| || || Sbjct: 1261 tccttcagctgctttgccacatctttggcagaggatcctgagacctcaatccaggtcttg 1202 Query: 623 gagaaga 629 ||||||| Sbjct: 1201 gagaaga 1195
>emb|AJ270222.1|ECA270222 Entodinium caudatum partial mRNA for hypothetical protein similar to Plasmodium falciparum transmembrane protein, clone L32 Length = 685 Score = 46.1 bits (23), Expect = 0.14 Identities = 29/31 (93%) Strand = Plus / Minus Query: 599 ccagagacttcaatccatgtttttgagaaga 629 ||||||||||||||||| ||||| ||||||| Sbjct: 321 ccagagacttcaatccaagttttagagaaga 291
>dbj|AP007164.1| Aspergillus oryzae RIB40 genomic DNA, SC111 Length = 2356219 Score = 46.1 bits (23), Expect = 0.14 Identities = 32/35 (91%) Strand = Plus / Plus Query: 599 ccagagacttcaatccatgtttttgagaagagagc 633 ||||||||||||||||| || || ||||||||||| Sbjct: 1923471 ccagagacttcaatccaggtcttggagaagagagc 1923505
>dbj|AK071224.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023087B12, full insert sequence Length = 1692 Score = 46.1 bits (23), Expect = 0.14 Identities = 47/55 (85%) Strand = Plus / Minus Query: 564 ccttcagctgcttagcgacatccttggctgatgaaccagagacttcaatccatgt 618 |||||| ||| ||| | |||||||| || ||||| ||||| |||||||||||||| Sbjct: 1181 ccttcaactgtttaacaacatcctttgcagatgagccagaaacttcaatccatgt 1127
>gb|AY113840.1| Harpagifer antarcticus Sec61 (SEC61) mRNA, complete cds Length = 1453 Score = 44.1 bits (22), Expect = 0.57 Identities = 40/46 (86%) Strand = Plus / Minus Query: 372 tctcaaagtactggtatatgatggtaacagccaacagaataccggt 417 ||||||||||||| || |||||||| || |||| ||| |||||||| Sbjct: 1400 tctcaaagtactgatagatgatggtgacggccagcaggataccggt 1355
>emb|AL669838.22| Mouse DNA sequence from clone RP23-324A4 on chromosome 11 Contains the Adcy1 gene for adenylate cyclase 1, a novel gene and a CpG island, complete sequence Length = 189132 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 245 agccagccaagcagtactgtg 265 ||||||||||||||||||||| Sbjct: 61129 agccagccaagcagtactgtg 61109
>emb|AL662959.3|OSJN00160 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0019G23, complete sequence Length = 150305 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 320 atcaatcagaacccaaagaaa 340 ||||||||||||||||||||| Sbjct: 111961 atcaatcagaacccaaagaaa 111981
>emb|AL096856.1|ATT24C20 Arabidopsis thaliana DNA chromosome 3, BAC clone T24C20 Length = 103889 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 359 tccttctcgaaggtctcaaag 379 ||||||||||||||||||||| Sbjct: 73084 tccttctcgaaggtctcaaag 73064
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 320 atcaatcagaacccaaagaaa 340 ||||||||||||||||||||| Sbjct: 4484229 atcaatcagaacccaaagaaa 4484249
>gb|AF525215.1| Takifugu rubripes Mx (Mx) gene, complete cds Length = 80367 Score = 42.1 bits (21), Expect = 2.2 Identities = 45/53 (84%) Strand = Plus / Plus Query: 374 tcaaagtactggtatatgatggtaacagccaacagaataccggttcctgaacc 426 |||||||||||||| |||||||| || ||||| || || ||||| || ||||| Sbjct: 12895 tcaaagtactggtagatgatggtcacggccaagaggattccggtacccgaacc 12947
>ref|XM_341558.2| PREDICTED: Rattus norvegicus Sec61, alpha subunit 2 (S. cerevisiae) (predicted) (Sec61a2_predicted), mRNA Length = 2169 Score = 42.1 bits (21), Expect = 2.2 Identities = 45/53 (84%) Strand = Plus / Minus Query: 461 gcaccgatgcatactccaccaaatgcagcagcagtagggatgtatctgttcag 513 ||||||||||||| || ||||| ||||| || || |||||||| |||||||| Sbjct: 1491 gcaccgatgcatagacccccaaaggcagctgctgtggggatgtacctgttcag 1439
>gb|AC127686.4| Mus musculus BAC clone RP24-188G23 from 3, complete sequence Length = 173474 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 244 cagccagccaagcagtactgt 264 ||||||||||||||||||||| Sbjct: 87791 cagccagccaagcagtactgt 87811
>gb|AC144776.2| Mus musculus BAC clone RP23-357B5 from chromosome 16, complete sequence Length = 190860 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 501 tgtatctgttcagttccttc 520 |||||||||||||||||||| Sbjct: 39904 tgtatctgttcagttccttc 39885
>gb|CP000233.1| Lactobacillus salivarius subsp. salivarius UCC118, complete genome Length = 1827111 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 476 ccaccaaatgcagcagcagtaggg 499 |||||||||||| ||||||||||| Sbjct: 1271555 ccaccaaatgcaacagcagtaggg 1271578
>gb|AC091464.8| Mus musculus chromosome 14, clone RP23-97N1, complete sequence Length = 237814 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 627 agagagcacatgctgacagc 646 |||||||||||||||||||| Sbjct: 152570 agagagcacatgctgacagc 152551
>emb|CT009509.7| Mouse DNA sequence from clone RP23-140C10 on chromosome 13, complete sequence Length = 218144 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 244 cagccagccaagcagtactg 263 |||||||||||||||||||| Sbjct: 106487 cagccagccaagcagtactg 106468
>gb|AC107759.18| Mus musculus chromosome 5, clone RP23-193N17, complete sequence Length = 262970 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 235 caaccaaaacagccagccaa 254 |||||||||||||||||||| Sbjct: 165739 caaccaaaacagccagccaa 165720
>gb|CP000300.1| Methanococcoides burtonii DSM 6242, complete genome Length = 2575032 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 618 tttttgagaagagagcacat 637 |||||||||||||||||||| Sbjct: 865256 tttttgagaagagagcacat 865237
>gb|DQ400445.1| Ictalurus punctatus immunoglobulin heavy chain gene locus, partial sequence and unknown gene Length = 257153 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 485 gcagcagcagtagggatgta 504 |||||||||||||||||||| Sbjct: 77860 gcagcagcagtagggatgta 77841
>emb|AL355362.7| Human DNA sequence from clone RP3-480M22 on chromosome 6 Contains the 5' end of the gene for p53-induced protein PIGPC1 (PERP) and a CpG island, complete sequence Length = 23812 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 478 accaaatgcagcagcagtag 497 |||||||||||||||||||| Sbjct: 11620 accaaatgcagcagcagtag 11601
>ref|XM_964922.1| PREDICTED: Tribolium castaneum similar to CG1007-PA (LOC658540), mRNA Length = 1937 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 57 aacattcagttgctatatag 76 |||||||||||||||||||| Sbjct: 1884 aacattcagttgctatatag 1865
>gb|AC107390.4| Homo sapiens BAC clone RP11-534O19 from 4, complete sequence Length = 114698 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 623 gagaagagagcacatgctga 642 |||||||||||||||||||| Sbjct: 89207 gagaagagagcacatgctga 89188
>gb|AC104072.3| Homo sapiens BAC clone RP11-320H14 from 4, complete sequence Length = 112494 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 433 gcccatgaaatcagccagaa 452 |||||||||||||||||||| Sbjct: 5512 gcccatgaaatcagccagaa 5531
>gb|M64400.1|ICTHAA1 Ictalurus punctatus Ig rearranged heavy chain variable region, partial cds Length = 405 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 485 gcagcagcagtagggatgta 504 |||||||||||||||||||| Sbjct: 22 gcagcagcagtagggatgta 3
>ref|NM_074033.2| Caenorhabditis elegans Serpentine Receptor, class X family member (srx-134) (srx-134) mRNA, complete cds Length = 924 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 52 cccaaaacattcagttgctatata 75 ||||||| |||||||||||||||| Sbjct: 418 cccaaaatattcagttgctatata 441
>gb|AF166114.1|AF166114 Mesostigma viride chloroplast DNA, complete genome Length = 118360 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 536 cgatggcctggcataaccatttgt 559 |||| ||||||||||||||||||| Sbjct: 75273 cgatcgcctggcataaccatttgt 75250
>gb|AC068787.41| Homo sapiens 12 BAC RP11-483I24 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 173320 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 588 tggctgatgaaccagagact 607 |||||||||||||||||||| Sbjct: 43980 tggctgatgaaccagagact 43961
>gb|DQ230631.1| Ictalurus punctatus clone 6H09AVH6 immunoglobulin heavy chain variable region mRNA, partial cds Length = 452 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 485 gcagcagcagtagggatgta 504 |||||||||||||||||||| Sbjct: 52 gcagcagcagtagggatgta 33
>gb|DQ230627.1| Ictalurus punctatus clone 6D10AVH6 immunoglobulin heavy chain variable region mRNA, partial cds Length = 460 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 485 gcagcagcagtagggatgta 504 |||||||||||||||||||| Sbjct: 48 gcagcagcagtagggatgta 29
>gb|DQ230625.1| Ictalurus punctatus clone 6C10AVH6 immunoglobulin heavy chain variable region mRNA, partial cds Length = 452 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 485 gcagcagcagtagggatgta 504 |||||||||||||||||||| Sbjct: 52 gcagcagcagtagggatgta 33
>gb|DQ230624.1| Ictalurus punctatus clone 6C09AVH6 immunoglobulin heavy chain variable region mRNA, partial cds Length = 454 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 485 gcagcagcagtagggatgta 504 |||||||||||||||||||| Sbjct: 48 gcagcagcagtagggatgta 29
>gb|DQ230622.1| Ictalurus punctatus clone 6C02AVH6 immunoglobulin heavy chain variable region mRNA, partial cds Length = 456 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 485 gcagcagcagtagggatgta 504 |||||||||||||||||||| Sbjct: 47 gcagcagcagtagggatgta 28
>gb|DQ230620.1| Ictalurus punctatus clone 6B01AVH6 immunoglobulin heavy chain variable region mRNA, partial cds Length = 461 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 485 gcagcagcagtagggatgta 504 |||||||||||||||||||| Sbjct: 52 gcagcagcagtagggatgta 33
>gb|DQ230614.1| Ictalurus punctatus clone 3B09AVH6 immunoglobulin heavy chain variable region mRNA, partial cds Length = 466 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 485 gcagcagcagtagggatgta 504 |||||||||||||||||||| Sbjct: 51 gcagcagcagtagggatgta 32
>gb|DQ230613.1| Ictalurus punctatus clone 2F12AVH6 immunoglobulin heavy chain variable region mRNA, partial cds Length = 467 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 485 gcagcagcagtagggatgta 504 |||||||||||||||||||| Sbjct: 52 gcagcagcagtagggatgta 33
>gb|DQ230612.1| Ictalurus punctatus clone 1H07AVH6 immunoglobulin heavy chain variable region mRNA, partial cds Length = 457 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 485 gcagcagcagtagggatgta 504 |||||||||||||||||||| Sbjct: 51 gcagcagcagtagggatgta 32
>gb|DQ230611.1| Ictalurus punctatus clone 1E09AVH6 immunoglobulin heavy chain variable region mRNA, partial cds Length = 456 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 485 gcagcagcagtagggatgta 504 |||||||||||||||||||| Sbjct: 44 gcagcagcagtagggatgta 25
>emb|AL929305.4| Zebrafish DNA sequence from clone DKEY-110K5, complete sequence Length = 166110 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 476 ccaccaaatgcagcagcagt 495 |||||||||||||||||||| Sbjct: 33945 ccaccaaatgcagcagcagt 33926
>gb|AC152984.2| Mus musculus 6 BAC RP23-462B3 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 185001 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 476 ccaccaaatgcagcagcagt 495 |||||||||||||||||||| Sbjct: 119204 ccaccaaatgcagcagcagt 119223
>dbj|AP002985.2| Homo sapiens genomic DNA, chromosome 11q clone:CTD-2542M24, complete sequence Length = 205152 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 433 gcccatgaaatcagccagaa 452 |||||||||||||||||||| Sbjct: 127652 gcccatgaaatcagccagaa 127671 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,753,600 Number of Sequences: 3902068 Number of extensions: 5753600 Number of successful extensions: 95792 Number of sequences better than 10.0: 203 Number of HSP's better than 10.0 without gapping: 203 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 95202 Number of HSP's gapped (non-prelim): 575 length of query: 648 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 625 effective length of database: 17,143,297,704 effective search space: 10714561065000 effective search space used: 10714561065000 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
