ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags25j24
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|U43498.1|HVU43498 Hordeum vulgare 0-methyltransferase mRNA, p... 1120 0.0
2gb|U54767.1|HVU54767 Hordeum vulgare caffeic acid O-methyltransf... 781 0.0
3dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 98 4e-17
4emb|AL845348.4|CNS08CBA Oryza sativa chromosome 12, . BAC OSJNBb... 98 4e-17
5gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 98 4e-17
6emb|BX664711.2|CNS09SC1 Oryza sativa chromosome 12, . BAC B1001E... 98 4e-17
7emb|AL713947.3|CNS07YPQ Oryza sativa chromosome 12, . BAC OJ1003... 66 1e-07
8ref|XM_470970.1| Oryza sativa (japonica cultivar-group), predic... 64 6e-07
9emb|AL662935.3|OSJN00146 Oryza sativa genomic DNA, chromosome 4,... 64 6e-07
10dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 64 6e-07
11dbj|AK069960.1| Oryza sativa (japonica cultivar-group) cDNA clon... 58 3e-05
12ref|XM_474640.1| Oryza sativa (japonica cultivar-group), predic... 50 0.009
13emb|AL731589.3|OSJN00239 Oryza sativa genomic DNA, chromosome 4,... 50 0.009
14dbj|AK098998.1| Oryza sativa (japonica cultivar-group) cDNA clon... 50 0.009
15dbj|AK072016.1| Oryza sativa (japonica cultivar-group) cDNA clon... 50 0.009
16gb|U63634.1|MCU63634 Mesembryanthemum crystallinum inositol meth... 50 0.009
17gb|M87340.1|CIPIMT1A Mesembryanthemum crystallinum methyl transf... 50 0.009
18gb|AC097497.2| Homo sapiens BAC clone RP11-324J17 from 4, comple... 48 0.034
19gb|AF067968.1|AF067968 Mesembryanthemum crystallinum caffeic aci... 46 0.13
20emb|CR450770.21| Zebrafish DNA sequence from clone DKEY-161M5 in... 44 0.53
21gb|AC165365.3| Mus musculus BAC clone RP23-28N13 from chromosome... 42 2.1
22gb|AC182659.2| Populus trichocarpa clone Pop1-125A14, complete s... 42 2.1
23dbj|AK134874.1| Mus musculus adult male olfactory brain cDNA, RI... 42 2.1
24gb|AC091893.3| Homo sapiens chromosome 5 clone RP11-12P19, compl... 42 2.1
25gb|AC169981.3| Mus musculus BAC clone RP24-346E16 from chromosom... 42 2.1
26gb|AE017126.1| Prochlorococcus marinus subsp. marinus str. CCMP1... 42 2.1
27gb|AC150386.2| Branchiostoma floridae clone CH302-103G16, comple... 40 8.2
28ref|XM_960728.1| Neurospora crassa OR74A hypothetical protein (N... 40 8.2
29ref|XM_954671.1| Neurospora crassa OR74A hypothetical protein (N... 40 8.2
30ref|XM_324860.1| Neurospora crassa OR74A hypothetical protein (N... 40 8.2
31ref|XM_331113.1| Neurospora crassa OR74A hypothetical protein (N... 40 8.2
32gb|AC147090.3| Pan troglodytes BAC clone RP43-58D11 from 7, comp... 40 8.2
33gb|AC108819.15| Mus musculus chromosome 14, clone RP23-474O16, c... 40 8.2
34gb|AC093477.6| Mus musculus chromosome 1, clone RP23-58B6, compl... 40 8.2
35emb|Z67990.1|CEF02D10 Caenorhabditis elegans Cosmid F02D10, comp... 40 8.2
36gb|AC110541.12| Mus musculus chromosome 7, clone RP23-105F19, co... 40 8.2
37ref|XM_725693.1| Plasmodium yoelii yoelii str. 17XNL hypothetica... 40 8.2
38gb|AC074214.8| Homo sapiens BAC clone RP11-520A8 from 7, complet... 40 8.2
39gb|AC142294.1| Pan troglodytes BAC clone RP43-73M4 from 7, compl... 40 8.2
40emb|AL732431.19| Human DNA sequence from clone XXyac-36GH4 on ch... 40 8.2
41emb|BX572095.1| Prochlorococcus marinus MIT9313 complete genome;... 40 8.2
42gb|AC123904.5| Homo sapiens 12 BAC RP11-361A23 (Roswell Park Can... 40 8.2
43gb|AC125482.9| Medicago truncatula clone mth2-15h11, complete se... 40 8.2
44dbj|AB057033.1| Helicobacter pylori cagA gene for cytotoxin asso... 40 8.2
45dbj|AB057031.1| Helicobacter pylori cagA gene for cytotoxin asso... 40 8.2
46dbj|AB057016.1| Helicobacter pylori cagA gene for cytotoxin asso... 40 8.2
47dbj|AB057015.1| Helicobacter pylori cagA gene for cytotoxin asso... 40 8.2
48gb|AC093656.4| Homo sapiens BAC clone RP11-440N4 from 4, complet... 40 8.2
49gb|AC097519.2| Homo sapiens BAC clone RP11-549K7 from 4, complet... 40 8.2
50gb|AF269342.1|AF269342 Staphylococcus epidermidis strain SR1 clo... 40 8.2
51gb|AF269321.1|AF269321 Staphylococcus epidermidis strain SR1 clo... 40 8.2
52gb|AC154855.2| Mus musculus BAC clone RP23-18N3 from chromosome ... 40 8.2
53gb|AC009559.8|AC009559 Homo sapiens chromosome 15, clone RP11-21... 40 8.2
54dbj|AB183825.1| Iris hollandica IhCOMT mRNA for Caffeic acid O-m... 40 8.2
55gb|AE001584.1| Borrelia burgdorferi B31 plasmid lp56, complete s... 40 8.2
56gb|AF270232.1|AF270232 Staphylococcus epidermidis strain SR1 clo... 40 8.2
57gb|AC125796.2| Homo sapiens chromosome 16 clone RP11-420N3, comp... 40 8.2
58gb|AC067918.1|AC067918 Neurospora crassa chromosome 7, clone G23... 40 8.2
59emb|BX908788.1| Neurospora crassa DNA linkage group VII BAC clon... 40 8.2
60gb|CP000029.1| Staphylococcus epidermidis RP62A, complete genome 40 8.2
61emb|BX470164.10| Zebrafish DNA sequence from clone DKEY-24L11 in... 40 8.2
62gb|AC007012.1|AC007012 Homo sapiens chromosome 16, clone 185J20,... 40 8.2
63gb|AC002352.1|AC002352 Homo sapiens 12q24 PAC P256D10 complete s... 40 8.2
64gb|AE015929.1| Staphylococcus epidermidis ATCC 12228, complete g... 40 8.2
65dbj|AP005671.2| Homo sapiens genomic DNA, chromosome 18 clone:CT... 40 8.2
66gb|AC131584.7| Mus musculus chromosome 1, clone RP23-215C21, com... 40 8.2
67emb|CR385047.19| Zebrafish DNA sequence from clone DKEY-221N16 i... 40 8.2
68emb|AL831778.8| Mouse DNA sequence from clone RP23-261L23 on chr... 40 8.2 
>gb|U43498.1|HVU43498 Hordeum vulgare 0-methyltransferase mRNA, partial cds
          Length = 983

 Score = 1120 bits (565), Expect = 0.0
 Identities = 595/605 (98%), Gaps = 2/605 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   gcttttatgatagaaata-taaaatgaaaatn-taaatgagcacgtgagctagcagctct 58
           |||||||||||||||||| ||||||||||||  |||||||||||||||||||||||||||
Sbjct: 956 gcttttatgatagaaataataaaatgaaaatcataaatgagcacgtgagctagcagctct 897

                                                                       
Query: 59  tattcgggacattattcgcnnnnnnngaagtgctcctattcgggactataccactctggt 118
           |||||||||||||||||||       ||||||||||||||||||||||||||||||||||
Sbjct: 896 tattcgggacattattcgcaaaaaaagaagtgctcctattcgggactataccactctggt 837

                                                                       
Query: 119 acgtggatgctacttggtgaactcaagagcgtaaaagttgaagaatatgtaggttttctt 178
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 836 acgtggatgctacttggtgaactcaagagcgtaaaagttgaagaatatgtaggttttctt 777

                                                                       
Query: 179 gatgccaccggtaaatccagcttgtttggctagcctggcaaactccttctccgtcctctg 238
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 776 gatgccaccggtaaatccagcttgtttggctagcctggcaaactccttctccgtcctctg 717

                                                                       
Query: 239 ctttgctcccttgaagagcacaaacatgatgatatccaaggtgaatgcatcccgcgctgt 298
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 716 ctttgctcccttgaagagcacaaacatgatgatatccaaggtgaatgcatcccgcgctgt 657

                                                                       
Query: 299 gagagacgagtctgggttctccgggaggataccatccacgacgatcaccttcccgtcttt 358
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 656 gagagacgagtctgggttctccgggaggataccatccacgacgatcaccttcccgtcttt 597

                                                                       
Query: 359 tgggagagcgttgtggcagttgcttagtattttgacgaactcgtcgtcgttaagcataag 418
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 596 tgggagagcgttgtggcagttgcttagtattttgacgaactcgtcgtcgttaagcataag 537

                                                                       
Query: 419 cgtgatccactgcaagagaaccgcatctccagtgggtatactctcatacatatctccagc 478
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 536 cgtgatccactgcaagagaaccgcatctccagtgggtatactctcatacatatctccagc 477

                                                                       
Query: 479 cacatgttcgactcctggaagagggaggccttgggcgatgacatgaggcaggtcatagtt 538
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 476 cacatgttcgactcctggaagagggaggccttgggcgatgacatgaggcaggtcatagtt 417

                                                                       
Query: 539 gatgccggtcatgtgcttgtacttagaggtgatcatccctagggtggagccggtgccacc 598
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 416 gatgccggtcatgtgcttgtacttagaggtgatcatccctagggtggagccggtgccacc 357

                
Query: 599 accga 603
           |||||
Sbjct: 356 accga 352
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>gb|U54767.1|HVU54767 Hordeum vulgare caffeic acid O-methyltransferase (HvCOMT) gene,
            complete cds
          Length = 5238

 Score =  781 bits (394), Expect = 0.0
 Identities = 424/434 (97%), Gaps = 2/434 (0%)
 Strand = Plus / Minus

                                                                        
Query: 1    gcttttatgatagaaata-taaaatgaaaatn-taaatgagcacgtgagctagcagctct 58
            |||||||||||||||||| ||||||||||||  |||||||||||||||||||||||||||
Sbjct: 4859 gcttttatgatagaaataataaaatgaaaatcataaatgagcacgtgagctagcagctct 4800

                                                                        
Query: 59   tattcgggacattattcgcnnnnnnngaagtgctcctattcgggactataccactctggt 118
            |||||||||||||||||||       ||||||||||||||||||||||||||||||||||
Sbjct: 4799 tattcgggacattattcgcaaaaaaagaagtgctcctattcgggactataccactctggt 4740

                                                                        
Query: 119  acgtggatgctacttggtgaactcaagagcgtaaaagttgaagaatatgtaggttttctt 178
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4739 acgtggatgctacttggtgaactcaagagcgtaaaagttgaagaatatgtaggttttctt 4680

                                                                        
Query: 179  gatgccaccggtaaatccagcttgtttggctagcctggcaaactccttctccgtcctctg 238
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4679 gatgccaccggtaaatccagcttgtttggctagcctggcaaactccttctccgtcctctg 4620

                                                                        
Query: 239  ctttgctcccttgaagagcacaaacatgatgatatccaaggtgaatgcatcccgcgctgt 298
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4619 ctttgctcccttgaagagcacaaacatgatgatatccaaggtgaatgcatcccgcgctgt 4560

                                                                        
Query: 299  gagagacgagtctgggttctccgggaggataccatccacgacgatcaccttcccgtcttt 358
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4559 gagagacgagtctgggttctccgggaggataccatccacgacgatcaccttcccgtcttt 4500

                                                                        
Query: 359  tgggagagcgttgtggcagttgcttagtattttgacgaactcgtcgtcgttaagcataag 418
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4499 tgggagagcgttgtggcagttgcttagtattttgacgaactcgtcgtcgttaagcataag 4440

                          
Query: 419  cgtgatccactgca 432
            ||||||||||||||
Sbjct: 4439 cgtgatccactgca 4426



 Score =  222 bits (112), Expect = 1e-54
 Identities = 112/112 (100%)
 Strand = Plus / Minus

                                                                        
Query: 492  cctggaagagggaggccttgggcgatgacatgaggcaggtcatagttgatgccggtcatg 551
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3650 cctggaagagggaggccttgggcgatgacatgaggcaggtcatagttgatgccggtcatg 3591

                                                                
Query: 552  tgcttgtacttagaggtgatcatccctagggtggagccggtgccaccaccga 603
            ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3590 tgcttgtacttagaggtgatcatccctagggtggagccggtgccaccaccga 3539



 Score =  135 bits (68), Expect = 2e-28
 Identities = 68/68 (100%)
 Strand = Plus / Minus

                                                                        
Query: 428  ctgcaagagaaccgcatctccagtgggtatactctcatacatatctccagccacatgttc 487
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3910 ctgcaagagaaccgcatctccagtgggtatactctcatacatatctccagccacatgttc 3851

                    
Query: 488  gactcctg 495
            ||||||||
Sbjct: 3850 gactcctg 3843
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
               sequence
          Length = 27566993

 Score = 97.6 bits (49), Expect = 4e-17
 Identities = 130/157 (82%)
 Strand = Plus / Minus

                                                                           
Query: 136     tgaactcaagagcgtaaaagttgaagaatatgtaggttttcttgatgccaccggtaaatc 195
               ||||||||||||| || ||||| ||||||||||||||   |   | |  ||||||||| |
Sbjct: 5374724 tgaactcaagagcatagaagttcaagaatatgtaggtcgaccgaaaggtaccggtaaagc 5374665

                                                                           
Query: 196     cagcttgtttggctagcctggcaaactccttctccgtcctctgctttgctcccttgaaga 255
               ||||||  ||||| ||| | |||||||| | |||||||||||| ||| || |||||||||
Sbjct: 5374664 cagcttccttggcaagctttgcaaactcttgctccgtcctctgttttcctaccttgaaga 5374605

                                                    
Query: 256     gcacaaacatgatgatatccaaggtgaatgcatcccg 292
               | ||||||||||| ||||||| |||||||| ||||||
Sbjct: 5374604 ggacaaacatgatcatatccatggtgaatgaatcccg 5374568



 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 65/72 (90%)
 Strand = Plus / Minus

                                                                           
Query: 515     gatgacatgaggcaggtcatagttgatgccggtcatgtgcttgtacttagaggtgatcat 574
               ||||||||||||||||||||||||||||||  | ||||||||||||   |||||||||||
Sbjct: 5364332 gatgacatgaggcaggtcatagttgatgcccctaatgtgcttgtaccgcgaggtgatcat 5364273

                           
Query: 575     ccctagggtgga 586
               ||| ||||||||
Sbjct: 5364272 ccccagggtgga 5364261



 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 135/169 (79%)
 Strand = Plus / Minus

                                                                           
Query: 127     gctacttggtgaactcaagagcgtaaaagttgaagaatatgtaggttttcttgatgccac 186
               |||||||  |||||||||| ||||| ||||| ||||||||||||||   |  || |  ||
Sbjct: 5173415 gctacttattgaactcaagggcgtagaagttcaagaatatgtaggtcgaccggaaggtac 5173356

                                                                           
Query: 187     cggtaaatccagcttgtttggctagcctggcaaactccttctccgtcctctgctttgctc 246
               ||||||| ||||  |  ||||| ||| | |||||||| | ||| ||||| |||||  || 
Sbjct: 5173355 cggtaaagccagactccttggcaagctttgcaaactcttgctctgtcctgtgcttcccta 5173296

                                                                
Query: 247     ccttgaagagcacaaacatgatgatatccaaggtgaatgcatcccgcgc 295
               |||||||||| ||||||| ||| ||||||| |||||||| |||| ||||
Sbjct: 5173295 ccttgaagaggacaaacaagatcatatccatggtgaatgaatcctgcgc 5173247



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 52/60 (86%)
 Strand = Plus / Minus

                                                                           
Query: 428     ctgcaagagaaccgcatctccagtgggtatactctcatacatatctccagccacatgttc 487
               |||||| ||||  ||||||||| |||| | ||||||||||||||||||||| | ||||||
Sbjct: 5172597 ctgcaaaagaattgcatctccattgggcacactctcatacatatctccagctatatgttc 5172538



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 61/72 (84%)
 Strand = Plus / Minus

                                                                           
Query: 515     gatgacatgaggcaggtcatagttgatgccggtcatgtgcttgtacttagaggtgatcat 574
               |||||| |||||||||||||||||||||||  | || ||||| |||    ||||||||||
Sbjct: 5172160 gatgacgtgaggcaggtcatagttgatgcccctaatatgcttataccgctaggtgatcat 5172101

                           
Query: 575     ccctagggtgga 586
               ||| ||||||||
Sbjct: 5172100 ccccagggtgga 5172089
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>emb|AL845348.4|CNS08CBA Oryza sativa chromosome 12, . BAC OSJNBb0070A23 of library OSJNBb from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 105645

 Score = 97.6 bits (49), Expect = 4e-17
 Identities = 130/157 (82%)
 Strand = Plus / Minus

                                                                         
Query: 136   tgaactcaagagcgtaaaagttgaagaatatgtaggttttcttgatgccaccggtaaatc 195
             ||||||||||||| || ||||| ||||||||||||||   |   | |  ||||||||| |
Sbjct: 46791 tgaactcaagagcatagaagttcaagaatatgtaggtcgaccgaaaggtaccggtaaagc 46732

                                                                         
Query: 196   cagcttgtttggctagcctggcaaactccttctccgtcctctgctttgctcccttgaaga 255
             ||||||  ||||| ||| | |||||||| | |||||||||||| ||| || |||||||||
Sbjct: 46731 cagcttccttggcaagctttgcaaactcttgctccgtcctctgttttcctaccttgaaga 46672

                                                  
Query: 256   gcacaaacatgatgatatccaaggtgaatgcatcccg 292
             | ||||||||||| ||||||| |||||||| ||||||
Sbjct: 46671 ggacaaacatgatcatatccatggtgaatgaatcccg 46635



 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 65/72 (90%)
 Strand = Plus / Minus

                                                                         
Query: 515   gatgacatgaggcaggtcatagttgatgccggtcatgtgcttgtacttagaggtgatcat 574
             ||||||||||||||||||||||||||||||  | ||||||||||||   |||||||||||
Sbjct: 36399 gatgacatgaggcaggtcatagttgatgcccctaatgtgcttgtaccgcgaggtgatcat 36340

                         
Query: 575   ccctagggtgga 586
             ||| ||||||||
Sbjct: 36339 ccccagggtgga 36328
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 97.6 bits (49), Expect = 4e-17
 Identities = 130/157 (82%)
 Strand = Plus / Minus

                                                                           
Query: 136     tgaactcaagagcgtaaaagttgaagaatatgtaggttttcttgatgccaccggtaaatc 195
               ||||||||||||| || ||||| ||||||||||||||   |   | |  ||||||||| |
Sbjct: 5374713 tgaactcaagagcatagaagttcaagaatatgtaggtcgaccgaaaggtaccggtaaagc 5374654

                                                                           
Query: 196     cagcttgtttggctagcctggcaaactccttctccgtcctctgctttgctcccttgaaga 255
               ||||||  ||||| ||| | |||||||| | |||||||||||| ||| || |||||||||
Sbjct: 5374653 cagcttccttggcaagctttgcaaactcttgctccgtcctctgttttcctaccttgaaga 5374594

                                                    
Query: 256     gcacaaacatgatgatatccaaggtgaatgcatcccg 292
               | ||||||||||| ||||||| |||||||| ||||||
Sbjct: 5374593 ggacaaacatgatcatatccatggtgaatgaatcccg 5374557



 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 65/72 (90%)
 Strand = Plus / Minus

                                                                           
Query: 515     gatgacatgaggcaggtcatagttgatgccggtcatgtgcttgtacttagaggtgatcat 574
               ||||||||||||||||||||||||||||||  | ||||||||||||   |||||||||||
Sbjct: 5364321 gatgacatgaggcaggtcatagttgatgcccctaatgtgcttgtaccgcgaggtgatcat 5364262

                           
Query: 575     ccctagggtgga 586
               ||| ||||||||
Sbjct: 5364261 ccccagggtgga 5364250



 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 135/169 (79%)
 Strand = Plus / Minus

                                                                           
Query: 127     gctacttggtgaactcaagagcgtaaaagttgaagaatatgtaggttttcttgatgccac 186
               |||||||  |||||||||| ||||| ||||| ||||||||||||||   |  || |  ||
Sbjct: 5173397 gctacttattgaactcaagggcgtagaagttcaagaatatgtaggtcgaccggaaggtac 5173338

                                                                           
Query: 187     cggtaaatccagcttgtttggctagcctggcaaactccttctccgtcctctgctttgctc 246
               ||||||| ||||  |  ||||| ||| | |||||||| | ||| ||||| |||||  || 
Sbjct: 5173337 cggtaaagccagactccttggcaagctttgcaaactcttgctctgtcctgtgcttcccta 5173278

                                                                
Query: 247     ccttgaagagcacaaacatgatgatatccaaggtgaatgcatcccgcgc 295
               |||||||||| ||||||| ||| ||||||| |||||||| |||| ||||
Sbjct: 5173277 ccttgaagaggacaaacaagatcatatccatggtgaatgaatcctgcgc 5173229



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 52/60 (86%)
 Strand = Plus / Minus

                                                                           
Query: 428     ctgcaagagaaccgcatctccagtgggtatactctcatacatatctccagccacatgttc 487
               |||||| ||||  ||||||||| |||| | ||||||||||||||||||||| | ||||||
Sbjct: 5172579 ctgcaaaagaattgcatctccattgggcacactctcatacatatctccagctatatgttc 5172520



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 61/72 (84%)
 Strand = Plus / Minus

                                                                           
Query: 515     gatgacatgaggcaggtcatagttgatgccggtcatgtgcttgtacttagaggtgatcat 574
               |||||| |||||||||||||||||||||||  | || ||||| |||    ||||||||||
Sbjct: 5172142 gatgacgtgaggcaggtcatagttgatgcccctaatatgcttataccgctaggtgatcat 5172083

                           
Query: 575     ccctagggtgga 586
               ||| ||||||||
Sbjct: 5172082 ccccagggtgga 5172071
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>emb|BX664711.2|CNS09SC1 Oryza sativa chromosome 12, . BAC B1001E08 of chromosome 12 of cultivar
             Nipponbare of ssp. japonica of Oryza sativa (rice),
             complete sequence
          Length = 141841

 Score = 97.6 bits (49), Expect = 4e-17
 Identities = 130/157 (82%)
 Strand = Plus / Plus

                                                                         
Query: 136   tgaactcaagagcgtaaaagttgaagaatatgtaggttttcttgatgccaccggtaaatc 195
             ||||||||||||| || ||||| ||||||||||||||   |   | |  ||||||||| |
Sbjct: 91084 tgaactcaagagcatagaagttcaagaatatgtaggtcgaccgaaaggtaccggtaaagc 91143

                                                                         
Query: 196   cagcttgtttggctagcctggcaaactccttctccgtcctctgctttgctcccttgaaga 255
             ||||||  ||||| ||| | |||||||| | |||||||||||| ||| || |||||||||
Sbjct: 91144 cagcttccttggcaagctttgcaaactcttgctccgtcctctgttttcctaccttgaaga 91203

                                                  
Query: 256   gcacaaacatgatgatatccaaggtgaatgcatcccg 292
             | ||||||||||| ||||||| |||||||| ||||||
Sbjct: 91204 ggacaaacatgatcatatccatggtgaatgaatcccg 91240



 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 65/72 (90%)
 Strand = Plus / Plus

                                                                          
Query: 515    gatgacatgaggcaggtcatagttgatgccggtcatgtgcttgtacttagaggtgatcat 574
              ||||||||||||||||||||||||||||||  | ||||||||||||   |||||||||||
Sbjct: 101476 gatgacatgaggcaggtcatagttgatgcccctaatgtgcttgtaccgcgaggtgatcat 101535

                          
Query: 575    ccctagggtgga 586
              ||| ||||||||
Sbjct: 101536 ccccagggtgga 101547
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>emb|AL713947.3|CNS07YPQ Oryza sativa chromosome 12, . BAC OJ1003_A04 of library Monsanto from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 124959

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 135/169 (79%)
 Strand = Plus / Plus

                                                                         
Query: 127   gctacttggtgaactcaagagcgtaaaagttgaagaatatgtaggttttcttgatgccac 186
             |||||||  |||||||||| ||||| ||||| ||||||||||||||   |  || |  ||
Sbjct: 90184 gctacttattgaactcaagggcgtagaagttcaagaatatgtaggtcgaccggaaggtac 90243

                                                                         
Query: 187   cggtaaatccagcttgtttggctagcctggcaaactccttctccgtcctctgctttgctc 246
             ||||||| ||||  |  ||||| ||| | |||||||| | ||| ||||| |||||  || 
Sbjct: 90244 cggtaaagccagactccttggcaagctttgcaaactcttgctctgtcctgtgcttcccta 90303

                                                              
Query: 247   ccttgaagagcacaaacatgatgatatccaaggtgaatgcatcccgcgc 295
             |||||||||| ||||||| ||| ||||||| |||||||| |||| ||||
Sbjct: 90304 ccttgaagaggacaaacaagatcatatccatggtgaatgaatcctgcgc 90352



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 61/72 (84%)
 Strand = Plus / Plus

                                                                         
Query: 515   gatgacatgaggcaggtcatagttgatgccggtcatgtgcttgtacttagaggtgatcat 574
             |||||| |||||||||||||||||||||||  | || ||||| |||    ||||||||||
Sbjct: 91439 gatgacgtgaggcaggtcatagttgatgcccctaatatgcttataccgctaggtgatcat 91498

                         
Query: 575   ccctagggtgga 586
             ||| ||||||||
Sbjct: 91499 ccccagggtgga 91510



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 52/60 (86%)
 Strand = Plus / Plus

                                                                         
Query: 428   ctgcaagagaaccgcatctccagtgggtatactctcatacatatctccagccacatgttc 487
             |||||| ||||  ||||||||| |||| | ||||||||||||||||||||| | ||||||
Sbjct: 91002 ctgcaaaagaattgcatctccattgggcacactctcatacatatctccagctatatgttc 91061
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>ref|XM_470970.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1065

 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 68/80 (85%)
 Strand = Plus / Minus

                                                                       
Query: 516 atgacatgaggcaggtcatagttgatgccggtcatgtgcttgtacttagaggtgatcatc 575
           |||||||||||||||||  |||| | |||||| |||| ||||||| | || |||||||||
Sbjct: 677 atgacatgaggcaggtcgaagttaacgccggtgatgttcttgtacctcgaagtgatcatc 618

                               
Query: 576 cctagggtggagccggtgcc 595
            | ||||||| |||||||||
Sbjct: 617 tccagggtggcgccggtgcc 598
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>emb|AL662935.3|OSJN00146 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0094O15,
              complete sequence
          Length = 144778

 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 68/80 (85%)
 Strand = Plus / Minus

                                                                          
Query: 516    atgacatgaggcaggtcatagttgatgccggtcatgtgcttgtacttagaggtgatcatc 575
              |||||||||||||||||  |||| | |||||| |||| ||||||| | || |||||||||
Sbjct: 103606 atgacatgaggcaggtcgaagttaacgccggtgatgttcttgtacctcgaagtgatcatc 103547

                                  
Query: 576    cctagggtggagccggtgcc 595
               | ||||||| |||||||||
Sbjct: 103546 tccagggtggcgccggtgcc 103527
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4,
              complete sequence
          Length = 35498469

 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 68/80 (85%)
 Strand = Plus / Minus

                                                                          
Query: 516    atgacatgaggcaggtcatagttgatgccggtcatgtgcttgtacttagaggtgatcatc 575
              |||||||||||||||||  |||| | |||||| |||| ||||||| | || |||||||||
Sbjct: 307786 atgacatgaggcaggtcgaagttaacgccggtgatgttcttgtacctcgaagtgatcatc 307727

                                  
Query: 576    cctagggtggagccggtgcc 595
               | ||||||| |||||||||
Sbjct: 307726 tccagggtggcgccggtgcc 307707



 Score = 50.1 bits (25), Expect = 0.009
 Identities = 67/81 (82%)
 Strand = Plus / Minus

                                                                           
Query: 515     gatgacatgaggcaggtcatagttgatgccggtcatgtgcttgtacttagaggtgatcat 574
               ||||||||| || |||||  |||| | |||||| || |||||||||   |||||||||||
Sbjct: 5127584 gatgacatggggtaggtcgaagttaacgccggtgatatgcttgtaccgggaggtgatcat 5127525

                                    
Query: 575     ccctagggtggagccggtgcc 595
               | | ||||||| |||||||||
Sbjct: 5127524 ctccagggtggcgccggtgcc 5127504
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>dbj|AK069960.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023037K22, full
           insert sequence
          Length = 1233

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 65/77 (84%)
 Strand = Plus / Minus

                                                                       
Query: 519 acatgaggcaggtcatagttgatgccggtcatgtgcttgtacttagaggtgatcatccct 578
           ||||||||||||||  |||| | |||||| |||| ||||||| | || ||||||||| | 
Sbjct: 684 acatgaggcaggtcgaagttaacgccggtgatgttcttgtacctcgaagtgatcatctcc 625

                            
Query: 579 agggtggagccggtgcc 595
           ||||||| |||||||||
Sbjct: 624 agggtggcgccggtgcc 608
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>ref|XM_474640.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1137

 Score = 50.1 bits (25), Expect = 0.009
 Identities = 67/81 (82%)
 Strand = Plus / Minus

                                                                       
Query: 515 gatgacatgaggcaggtcatagttgatgccggtcatgtgcttgtacttagaggtgatcat 574
           ||||||||| || |||||  |||| | |||||| || |||||||||   |||||||||||
Sbjct: 747 gatgacatggggtaggtcgaagttaacgccggtgatatgcttgtaccgggaggtgatcat 688

                                
Query: 575 ccctagggtggagccggtgcc 595
           | | ||||||| |||||||||
Sbjct: 687 ctccagggtggcgccggtgcc 667
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>emb|AL731589.3|OSJN00239 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0039G19,
              complete sequence
          Length = 144144

 Score = 50.1 bits (25), Expect = 0.009
 Identities = 67/81 (82%)
 Strand = Plus / Minus

                                                                          
Query: 515    gatgacatgaggcaggtcatagttgatgccggtcatgtgcttgtacttagaggtgatcat 574
              ||||||||| || |||||  |||| | |||||| || |||||||||   |||||||||||
Sbjct: 103857 gatgacatggggtaggtcgaagttaacgccggtgatatgcttgtaccgggaggtgatcat 103798

                                   
Query: 575    ccctagggtggagccggtgcc 595
              | | ||||||| |||||||||
Sbjct: 103797 ctccagggtggcgccggtgcc 103777
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>dbj|AK098998.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013104D16, full
           insert sequence
          Length = 1308

 Score = 50.1 bits (25), Expect = 0.009
 Identities = 67/81 (82%)
 Strand = Plus / Minus

                                                                       
Query: 515 gatgacatgaggcaggtcatagttgatgccggtcatgtgcttgtacttagaggtgatcat 574
           ||||||||| || |||||  |||| | |||||| || |||||||||   |||||||||||
Sbjct: 773 gatgacatggggtaggtcgaagttaacgccggtgatatgcttgtaccgggaggtgatcat 714

                                
Query: 575 ccctagggtggagccggtgcc 595
           | | ||||||| |||||||||
Sbjct: 713 ctccagggtggcgccggtgcc 693
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>dbj|AK072016.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013102F20, full
           insert sequence
          Length = 1365

 Score = 50.1 bits (25), Expect = 0.009
 Identities = 67/81 (82%)
 Strand = Plus / Minus

                                                                       
Query: 515 gatgacatgaggcaggtcatagttgatgccggtcatgtgcttgtacttagaggtgatcat 574
           ||||||||| || |||||  |||| | |||||| || |||||||||   |||||||||||
Sbjct: 760 gatgacatggggtaggtcgaagttaacgccggtgatatgcttgtaccgggaggtgatcat 701

                                
Query: 575 ccctagggtggagccggtgcc 595
           | | ||||||| |||||||||
Sbjct: 700 ctccagggtggcgccggtgcc 680
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>gb|U63634.1|MCU63634 Mesembryanthemum crystallinum inositol methyltransferase (Imt1) gene,
            complete cds
          Length = 3929

 Score = 50.1 bits (25), Expect = 0.009
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                         
Query: 516  atgacatgaggcaggtcatagttgatgcc 544
            ||||||||||||| |||||||||||||||
Sbjct: 2808 atgacatgaggcaagtcatagttgatgcc 2780
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>gb|M87340.1|CIPIMT1A Mesembryanthemum crystallinum methyl transferase (Imt1) mRNA,
           complete cds
          Length = 1494

 Score = 50.1 bits (25), Expect = 0.009
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                        
Query: 516 atgacatgaggcaggtcatagttgatgcc 544
           ||||||||||||| |||||||||||||||
Sbjct: 756 atgacatgaggcaagtcatagttgatgcc 728
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>gb|AC097497.2| Homo sapiens BAC clone RP11-324J17 from 4, complete sequence
          Length = 195069

 Score = 48.1 bits (24), Expect = 0.034
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                       
Query: 11   tagaaatataaaatgaaaatntaaatg 37
            |||||||||||||||||||| ||||||
Sbjct: 2985 tagaaatataaaatgaaaatataaatg 2959
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>gb|AF067968.1|AF067968 Mesembryanthemum crystallinum caffeic acid 3-O-methyltransferase
           mRNA, partial cds
          Length = 1205

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                          
Query: 514 cgatgacatgaggcaggtcatagttgatgcc 544
           |||||||||||||||| ||| ||||||||||
Sbjct: 666 cgatgacatgaggcagatcaaagttgatgcc 636
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>emb|CR450770.21| Zebrafish DNA sequence from clone DKEY-161M5 in linkage group 8,
             complete sequence
          Length = 153753

 Score = 44.1 bits (22), Expect = 0.53
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 14    aaatataaaatgaaaatntaaatga 38
             ||||||||||||||||| |||||||
Sbjct: 56890 aaatataaaatgaaaatataaatga 56914
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>gb|AC165365.3| Mus musculus BAC clone RP23-28N13 from chromosome 6, complete sequence
          Length = 238262

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 462    tcatacatatctccagccacatgtt 486
              |||||||||| ||||||||||||||
Sbjct: 237760 tcatacatatatccagccacatgtt 237784
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>gb|AC182659.2| Populus trichocarpa clone Pop1-125A14, complete sequence
          Length = 75970

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 5    ttatgatagaaatataaaatgaaaa 29
            |||||||||||||||||||| ||||
Sbjct: 4024 ttatgatagaaatataaaattaaaa 4048
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>dbj|AK134874.1| Mus musculus adult male olfactory brain cDNA, RIKEN full-length
            enriched library, clone:6430501C11
            product:unclassifiable, full insert sequence
          Length = 1789

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 462  tcatacatatctccagccacatgtt 486
            |||||||||| ||||||||||||||
Sbjct: 1024 tcatacatatatccagccacatgtt 1048
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>gb|AC091893.3| Homo sapiens chromosome 5 clone RP11-12P19, complete sequence
          Length = 154364

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 6     tatgatagaaatataaaatga 26
             |||||||||||||||||||||
Sbjct: 91640 tatgatagaaatataaaatga 91620
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>gb|AC169981.3| Mus musculus BAC clone RP24-346E16 from chromosome 6, complete sequence
          Length = 150872

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 462   tcatacatatctccagccacatgtt 486
             |||||||||| ||||||||||||||
Sbjct: 45951 tcatacatatatccagccacatgtt 45975
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>gb|AE017126.1| Prochlorococcus marinus subsp. marinus str. CCMP1375 complete genome
          Length = 1751080

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 154    agttgaagaatatgtaggttttctt 178
              |||||||||| ||||||||||||||
Sbjct: 313473 agttgaagaaaatgtaggttttctt 313449
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>gb|AC150386.2| Branchiostoma floridae clone CH302-103G16, complete sequence
          Length = 195926

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 584    ggagccggtgccaccaccga 603
              ||||||||||||||||||||
Sbjct: 156214 ggagccggtgccaccaccga 156233
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>ref|XM_960728.1| Neurospora crassa OR74A hypothetical protein (NCU00681.1) partial
           mRNA
          Length = 3549

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 493 ctggaagagggaggccttgg 512
           ||||||||||||||||||||
Sbjct: 111 ctggaagagggaggccttgg 92
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>ref|XM_954671.1| Neurospora crassa OR74A hypothetical protein (NCU02338.1) partial
           mRNA
          Length = 843

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 499 gagggaggccttgggcgatg 518
           ||||||||||||||||||||
Sbjct: 265 gagggaggccttgggcgatg 246
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>ref|XM_324860.1| Neurospora crassa OR74A hypothetical protein (NCU00681.1) partial
           mRNA
          Length = 3549

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 493 ctggaagagggaggccttgg 512
           ||||||||||||||||||||
Sbjct: 111 ctggaagagggaggccttgg 92
to top
>ref|XM_331113.1| Neurospora crassa OR74A hypothetical protein (NCU02338.1) partial
           mRNA
          Length = 843

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 499 gagggaggccttgggcgatg 518
           ||||||||||||||||||||
Sbjct: 265 gagggaggccttgggcgatg 246
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>gb|AC147090.3| Pan troglodytes BAC clone RP43-58D11 from 7, complete sequence
          Length = 200913

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 2     cttttatgatagaaatataaaatg 25
             ||||||||||| ||||||||||||
Sbjct: 34397 cttttatgataaaaatataaaatg 34420
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>gb|AC108819.15| Mus musculus chromosome 14, clone RP23-474O16, complete sequence
          Length = 195771

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 7      atgatagaaatataaaatgaaaat 30
              |||||||||||| |||||||||||
Sbjct: 128310 atgatagaaatagaaaatgaaaat 128287
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>gb|AC093477.6| Mus musculus chromosome 1, clone RP23-58B6, complete sequence
          Length = 225321

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 249    ttgaagagcacaaacatgat 268
              ||||||||||||||||||||
Sbjct: 180691 ttgaagagcacaaacatgat 180672
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>emb|Z67990.1|CEF02D10 Caenorhabditis elegans Cosmid F02D10, complete sequence
          Length = 25359

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 395   gaactcgtcgtcgttaagca 414
             ||||||||||||||||||||
Sbjct: 23437 gaactcgtcgtcgttaagca 23418
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>gb|AC110541.12| Mus musculus chromosome 7, clone RP23-105F19, complete sequence
          Length = 213499

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 10    atagaaatataaaatgaaaa 29
             ||||||||||||||||||||
Sbjct: 87677 atagaaatataaaatgaaaa 87658
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>ref|XM_725693.1| Plasmodium yoelii yoelii str. 17XNL hypothetical protein (PY00040)
            partial mRNA
          Length = 15690

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 5    ttatgatagaaatataaaat 24
            ||||||||||||||||||||
Sbjct: 2397 ttatgatagaaatataaaat 2416
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>gb|AC074214.8| Homo sapiens BAC clone RP11-520A8 from 7, complete sequence
          Length = 43276

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 2     cttttatgatagaaatataaaatg 25
             ||||||||||| ||||||||||||
Sbjct: 22879 cttttatgataaaaatataaaatg 22856
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>gb|AC142294.1| Pan troglodytes BAC clone RP43-73M4 from 7, complete sequence
          Length = 173444

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 2     cttttatgatagaaatataaaatg 25
             ||||||||||| ||||||||||||
Sbjct: 70334 cttttatgataaaaatataaaatg 70357
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>emb|AL732431.19| Human DNA sequence from clone XXyac-36GH4 on chromosome 6 Contains the
              gene for acid sphingomyelinase-like phosphodiesterase 3a
              (ASML3A), an H+ transporting mitochondrial F0 complex ATP
              synthase subunit g (ATP5L) pseudogene and two CpG islands,
              complete sequence
          Length = 164746

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 25/27 (92%)
 Strand = Plus / Plus

                                         
Query: 12     agaaatataaaatgaaaatntaaatga 38
              |||||||||||||||||||  ||||||
Sbjct: 135536 agaaatataaaatgaaaatgaaaatga 135562
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>emb|BX572095.1| Prochlorococcus marinus MIT9313 complete genome; segment 1/7
          Length = 349391

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 214    tggcaaactccttctccgtc 233
              ||||||||||||||||||||
Sbjct: 340353 tggcaaactccttctccgtc 340372
to top
>gb|AC123904.5| Homo sapiens 12 BAC RP11-361A23 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 125400

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 260    aaacatgatgatatccaagg 279
              ||||||||||||||||||||
Sbjct: 120643 aaacatgatgatatccaagg 120624
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>gb|AC125482.9| Medicago truncatula clone mth2-15h11, complete sequence
          Length = 129658

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 258    acaaacatgatgatatccaa 277
              ||||||||||||||||||||
Sbjct: 111959 acaaacatgatgatatccaa 111978
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>dbj|AB057033.1| Helicobacter pylori cagA gene for cytotoxin associated protein
           CagA, partial cds, 3' region, strain:JapanK101
          Length = 734

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 356 ttttgggagagcgttgtggc 375
           ||||||||||||||||||||
Sbjct: 137 ttttgggagagcgttgtggc 118
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>dbj|AB057031.1| Helicobacter pylori cagA gene for cytotoxin associated protein
           CagA, partial cds, 3' region, strain:JapanK89
          Length = 734

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 356 ttttgggagagcgttgtggc 375
           ||||||||||||||||||||
Sbjct: 137 ttttgggagagcgttgtggc 118
to top
>dbj|AB057016.1| Helicobacter pylori cagA gene for cytotoxin associated protein
           CagA, partial cds, 3' region, strain:JapanK41
          Length = 728

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 356 ttttgggagagcgttgtggc 375
           ||||||||||||||||||||
Sbjct: 137 ttttgggagagcgttgtggc 118
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>dbj|AB057015.1| Helicobacter pylori cagA gene for cytotoxin associated protein
           CagA, partial cds, 3' region, strain:JapanK35
          Length = 734

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 356 ttttgggagagcgttgtggc 375
           ||||||||||||||||||||
Sbjct: 137 ttttgggagagcgttgtggc 118
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>gb|AC093656.4| Homo sapiens BAC clone RP11-440N4 from 4, complete sequence
          Length = 152326

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 10    atagaaatataaaatgaaaa 29
             ||||||||||||||||||||
Sbjct: 49737 atagaaatataaaatgaaaa 49718
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>gb|AC097519.2| Homo sapiens BAC clone RP11-549K7 from 4, complete sequence
          Length = 185556

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 10     atagaaatataaaatgaaaa 29
              ||||||||||||||||||||
Sbjct: 116099 atagaaatataaaatgaaaa 116080
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>gb|AF269342.1|AF269342 Staphylococcus epidermidis strain SR1 clone step.1002d03 genomic
           sequence
          Length = 3734

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 151 aaaagttgaagaatatgtag 170
           ||||||||||||||||||||
Sbjct: 177 aaaagttgaagaatatgtag 158
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>gb|AF269321.1|AF269321 Staphylococcus epidermidis strain SR1 clone step.1002a08 genomic
            sequence
          Length = 3383

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 151  aaaagttgaagaatatgtag 170
            ||||||||||||||||||||
Sbjct: 2238 aaaagttgaagaatatgtag 2257
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>gb|AC154855.2| Mus musculus BAC clone RP23-18N3 from chromosome 14, complete sequence
          Length = 197373

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 7      atgatagaaatataaaatgaaaat 30
              |||||||||||| |||||||||||
Sbjct: 195831 atgatagaaatagaaaatgaaaat 195854
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>gb|AC009559.8|AC009559 Homo sapiens chromosome 15, clone RP11-215J7, complete sequence
          Length = 162778

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 7      atgatagaaatataaaatgaaaat 30
              |||||||||||||||||| |||||
Sbjct: 111874 atgatagaaatataaaatcaaaat 111897
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>dbj|AB183825.1| Iris hollandica IhCOMT mRNA for Caffeic acid O-methyltransferase,
           complete cds
          Length = 1303

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                               
Query: 441 gcatctccagtgggtatactctcatacatatctcca 476
           ||||||||| |||| | ||||||| |||||||||||
Sbjct: 788 gcatctccactgggaacactctcaaacatatctcca 753
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>gb|AE001584.1| Borrelia burgdorferi B31 plasmid lp56, complete sequence
          Length = 52971

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 6     tatgatagaaatataaaatg 25
             ||||||||||||||||||||
Sbjct: 47504 tatgatagaaatataaaatg 47523
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>gb|AF270232.1|AF270232 Staphylococcus epidermidis strain SR1 clone step.1055e11 genomic
            sequence
          Length = 2995

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 151  aaaagttgaagaatatgtag 170
            ||||||||||||||||||||
Sbjct: 1549 aaaagttgaagaatatgtag 1530
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>gb|AC125796.2| Homo sapiens chromosome 16 clone RP11-420N3, complete sequence
          Length = 162666

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 7     atgatagaaatataaaatgaaaat 30
             |||| |||||||||||||||||||
Sbjct: 18302 atgacagaaatataaaatgaaaat 18325
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>gb|AC067918.1|AC067918 Neurospora crassa chromosome 7, clone G23-F12, complete sequence
          Length = 42412

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 499  gagggaggccttgggcgatg 518
            ||||||||||||||||||||
Sbjct: 5744 gagggaggccttgggcgatg 5763
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>emb|BX908788.1| Neurospora crassa DNA linkage group VII BAC clone B23N11
          Length = 46353

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 499   gagggaggccttgggcgatg 518
             ||||||||||||||||||||
Sbjct: 39948 gagggaggccttgggcgatg 39967
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>gb|CP000029.1| Staphylococcus epidermidis RP62A, complete genome
          Length = 2616530

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 151    aaaagttgaagaatatgtag 170
              ||||||||||||||||||||
Sbjct: 226670 aaaagttgaagaatatgtag 226689
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>emb|BX470164.10| Zebrafish DNA sequence from clone DKEY-24L11 in linkage group 18,
              complete sequence
          Length = 248419

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 187    cggtaaatccagcttgtttg 206
              ||||||||||||||||||||
Sbjct: 147510 cggtaaatccagcttgtttg 147491
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>gb|AC007012.1|AC007012 Homo sapiens chromosome 16, clone 185J20, complete sequence
          Length = 168731

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 7     atgatagaaatataaaatgaaaat 30
             |||| |||||||||||||||||||
Sbjct: 22212 atgacagaaatataaaatgaaaat 22189
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>gb|AC002352.1|AC002352 Homo sapiens 12q24 PAC P256D10 complete sequence
          Length = 162405

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 206   ggctagcctggcaaactcct 225
             ||||||||||||||||||||
Sbjct: 87830 ggctagcctggcaaactcct 87811
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>gb|AE015929.1| Staphylococcus epidermidis ATCC 12228, complete genome
          Length = 2499279

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 151    aaaagttgaagaatatgtag 170
              ||||||||||||||||||||
Sbjct: 342005 aaaagttgaagaatatgtag 342024
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>dbj|AP005671.2| Homo sapiens genomic DNA, chromosome 18 clone:CTD-3096M3, complete
             sequence
          Length = 86000

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 245   tcccttgaagagcacaaaca 264
             ||||||||||||||||||||
Sbjct: 62557 tcccttgaagagcacaaaca 62538
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>gb|AC131584.7| Mus musculus chromosome 1, clone RP23-215C21, complete sequence
          Length = 197346

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 249   ttgaagagcacaaacatgat 268
             ||||||||||||||||||||
Sbjct: 79901 ttgaagagcacaaacatgat 79882
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>emb|CR385047.19| Zebrafish DNA sequence from clone DKEY-221N16 in linkage group 18,
              complete sequence
          Length = 193827

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 187    cggtaaatccagcttgtttg 206
              ||||||||||||||||||||
Sbjct: 173244 cggtaaatccagcttgtttg 173225
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>emb|AL831778.8| Mouse DNA sequence from clone RP23-261L23 on chromosome 4, complete
             sequence
          Length = 213495

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 10    atagaaatataaaatgaaaa 29
             ||||||||||||||||||||
Sbjct: 58506 atagaaatataaaatgaaaa 58487


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,518,770
Number of Sequences: 3902068
Number of extensions: 4518770
Number of successful extensions: 89621
Number of sequences better than 10.0: 68
Number of HSP's better than 10.0 without gapping: 69
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 89345
Number of HSP's gapped (non-prelim): 272
length of query: 603
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 580
effective length of database: 17,143,297,704
effective search space: 9943112668320
effective search space used: 9943112668320
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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