ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags25j09
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|M27303.1|BLYCAMA Barley cam gene encoding calmodulin, complet... 367 8e-99
2gb|U49104.1|TAU49104 Triticum aestivum calmodulin TaCaM3-3 mRNA,... 321 4e-85
3gb|U49103.1|TAU49103 Triticum aestivum calmodulin TaCaM3-2 mRNA,... 274 9e-71
4gb|U48693.1|TAU48693 Triticum aestivum calmodulin TaCaM3-1 mRNA,... 252 3e-64
5ref|XM_479602.1| Oryza sativa (japonica cultivar-group), mRNA 54 2e-04
6gb|AF441191.1|AF441191 Oryza sativa clone 15079 calmodulin (CaM)... 54 2e-04
7dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 54 2e-04
8dbj|AP003813.4| Oryza sativa (japonica cultivar-group) genomic D... 54 2e-04
9dbj|AP003818.2| Oryza sativa (japonica cultivar-group) genomic D... 54 2e-04
10dbj|AK104031.1| Oryza sativa (japonica cultivar-group) cDNA clon... 54 2e-04
11dbj|AK071852.1| Oryza sativa (japonica cultivar-group) cDNA clon... 52 6e-04
12gb|AF170961.1|AF170961 Calopteryx aequabilis 16S ribosomal RNA g... 42 0.61
13emb|CR388143.6| Zebrafish DNA sequence from clone DKEY-189O20 in... 40 2.4
14emb|BX511021.9| Zebrafish DNA sequence from clone DKEY-16P21 in ... 40 2.4
15gb|CP000020.1| Vibrio fischeri ES114 chromosome I, complete sequ... 40 2.4
16gb|AC097176.3| Oryza sativa (japonica cultivar-group) chromosome... 38 9.6
17gb|BT017311.1| Zea mays clone EL01N0317H06.c mRNA sequence 38 9.6
18gb|BT016176.1| Zea mays clone Contig9 mRNA sequence 38 9.6
19gb|AC159092.11| Mus musculus chromosome 1, clone RP23-103C13, co... 38 9.6
20gb|AC114986.13| Mus musculus chromosome 1, clone RP23-242G7, com... 38 9.6
21gb|AC140275.3| Mus musculus BAC clone RP24-312F4 from chromosome... 38 9.6
22gb|AC122261.2| Mus musculus BAC clone RP23-187F24 from 15, compl... 38 9.6
23gb|AC108513.3| Homo sapiens BAC clone RP13-936H15 from 7, comple... 38 9.6
24gb|AC118931.8| Mus musculus chromosome 19, clone RP24-118A21, co... 38 9.6
25emb|Z11546.1|ZMCHHSP60 Z.mays mRNA for mitochondrial chaperonin ... 38 9.6
26emb|Z12114.1|ZMCPNAGA Z.mays CPNA gene encoding mitochondrial ch... 38 9.6
27emb|CR857144.1| Pongo pygmaeus mRNA; cDNA DKFZp469A1421 (from cl... 38 9.6
28emb|AJ252242.1|PSE252242 pea seed-borne mosaic virus complete ge... 38 9.6
29ref|NM_059759.2| Caenorhabditis elegans D2005.4 (D2005.4) mRNA, ... 38 9.6
30gb|AF170960.1|AF170960 Calopteryx maculata 16S ribosomal RNA gen... 38 9.6
31gb|AF170959.1|AF170959 Calopteryx dimidiata 16S ribosomal RNA ge... 38 9.6
32dbj|AK078575.1| Mus musculus 11 days embryo gonad cDNA, RIKEN fu... 38 9.6
33emb|BX005156.9| Zebrafish DNA sequence from clone CH211-165F21 i... 38 9.6
34dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 38 9.6
35gb|AC091167.19| Homo sapiens chromosome 15, clone RP11-697E2, co... 38 9.6
36gb|AC135893.2| Homo sapiens 3 BAC RP11-643E20 (Roswell Park Canc... 38 9.6
37gb|AC102898.15| Mus musculus chromosome 7, clone RP24-321O23, co... 38 9.6
38gb|AC109220.16| Mus musculus chromosome 7, clone RP23-84B11, com... 38 9.6
39dbj|AK108341.1| Oryza sativa (japonica cultivar-group) cDNA clon... 38 9.6
40gb|BT023997.1| Zea mays clone EL01N0314G02 mRNA sequence 38 9.6
41gb|AY109623.1| Zea mays CL2221_1 mRNA sequence 38 9.6
42gb|AC125134.3| Mus musculus BAC clone RP24-316C22 from 1, comple... 38 9.6
43emb|AL672019.7| Mouse DNA sequence from clone RP23-33P21 on chro... 38 9.6
44gb|L21006.1|MZECPN60X Zea mays mitochondrial chaperonin 60 (mtcp... 38 9.6
45gb|L21008.1|MZECPN60B Corn nuclear-encoded mitochondrial chapero... 38 9.6
46gb|L21007.1|MZECPN60A Corn nuclear-encoded mitochondrial chapero... 38 9.6 
>gb|M27303.1|BLYCAMA Barley cam gene encoding calmodulin, complete cds
          Length = 1086

 Score =  367 bits (185), Expect = 8e-99
 Identities = 191/193 (98%)
 Strand = Plus / Minus

                                                                       
Query: 1   gaagagcgaagcagaagttgatgagaaaatatactacagacgggcccaacagcaatcagg 60
           ||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 971 gaagagcgaacgagaagttgatgagaaaatatactacagacgggcccaacagcaatcagg 912

                                                                       
Query: 61  atacaccagggaggacacaagttcacataaaacacaagaggtctggaaacacactggaga 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 911 atacaccagggaggacacaagttcacataaaacacaagaggtctggaaacacactggaga 852

                                                                       
Query: 121 gcatagcaggaattgcgtcgtgcgatccgttttagcagctacagctaggtaggatgctta 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 851 gcatagcaggaattgcgtcgtgcgatccgttttagcagctacagctaggtaggatgctta 792

                        
Query: 181 actggaaatcgat 193
           |||||||||||||
Sbjct: 791 actggaaatcgat 779
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>gb|U49104.1|TAU49104 Triticum aestivum calmodulin TaCaM3-3 mRNA, complete cds
          Length = 846

 Score =  321 bits (162), Expect = 4e-85
 Identities = 187/194 (96%), Gaps = 1/194 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   gaagagcgaagcagaagttgatgagaaaatatactacagacggg-cccaacagcaatcag 59
           |||||| ||||||||||||||||| ||||||||||||| ||||| |||||||||||||||
Sbjct: 822 gaagagtgaagcagaagttgatgaaaaaatatactacaaacggggcccaacagcaatcag 763

                                                                       
Query: 60  gatacaccagggaggacacaagttcacataaaacacaagaggtctggaaacacactggag 119
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 762 gatacaccagggaggacacaagttcacataaaacacaagaggtctggaaacacactggag 703

                                                                       
Query: 120 agcatagcaggaattgcgtcgtgcgatccgttttagcagctacagctaggtaggatgctt 179
           | |||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||
Sbjct: 702 aacatagcaggaattgcgtcgtccgatccgctttagcagctacagctaggtaggatgctt 643

                         
Query: 180 aactggaaatcgat 193
           ||||||||||||||
Sbjct: 642 aactggaaatcgat 629
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>gb|U49103.1|TAU49103 Triticum aestivum calmodulin TaCaM3-2 mRNA, complete cds
          Length = 811

 Score =  274 bits (138), Expect = 9e-71
 Identities = 144/146 (98%)
 Strand = Plus / Minus

                                                                       
Query: 48  aacagcaatcaggatacaccagggaggacacaagttcacataaaacacaagaggtctgga 107
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 773 aacagcaatcaggatacaccagggaggacacaagttcacataaaacacaagaggtctgga 714

                                                                       
Query: 108 aacacactggagagcatagcaggaattgcgtcgtgcgatccgttttagcagctacagcta 167
           ||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 713 aacacactggagaacatagcaggaattgcgtcgtccgatccgttttagcagctacagcta 654

                                     
Query: 168 ggtaggatgcttaactggaaatcgat 193
           ||||||||||||||||||||||||||
Sbjct: 653 ggtaggatgcttaactggaaatcgat 628
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>gb|U48693.1|TAU48693 Triticum aestivum calmodulin TaCaM3-1 mRNA, complete cds
          Length = 1529

 Score =  252 bits (127), Expect = 3e-64
 Identities = 133/135 (98%)
 Strand = Plus / Minus

                                                                        
Query: 59   ggatacaccagggaggacacaagttcacataaaacacaagaggtctggaaacacactgga 118
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1528 ggatacaccagggaggacacaagttcacataaaacacaagaggtctggaaacacactgga 1469

                                                                        
Query: 119  gagcatagcaggaattgcgtcgtgcgatccgttttagcagctacagctaggtaggatgct 178
            || |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 1468 gaacatagcaggaattgcgtcgtccgatccgttttagcagctacagctaggtaggatgct 1409

                           
Query: 179  taactggaaatcgat 193
            |||||||||||||||
Sbjct: 1408 taactggaaatcgat 1394
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>ref|XM_479602.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 732

 Score = 54.0 bits (27), Expect = 2e-04
 Identities = 33/35 (94%)
 Strand = Plus / Minus

                                              
Query: 81  gttcacataaaacacaagaggtctggaaacacact 115
           |||||||||||||||||||| |||| |||||||||
Sbjct: 641 gttcacataaaacacaagagatctgaaaacacact 607



 Score = 42.1 bits (21), Expect = 0.61
 Identities = 40/45 (88%), Gaps = 1/45 (2%)
 Strand = Plus / Minus

                                                        
Query: 145 atccgttttagcagctacagctaggtaggatgcttaactggaaat 189
           |||| |||||||  |||||||||| |||||||||| |||||||||
Sbjct: 585 atcctttttagcgactacagctag-taggatgcttcactggaaat 542
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>gb|AF441191.1|AF441191 Oryza sativa clone 15079 calmodulin (CaM) mRNA, complete cds
          Length = 813

 Score = 54.0 bits (27), Expect = 2e-04
 Identities = 33/35 (94%)
 Strand = Plus / Minus

                                              
Query: 81  gttcacataaaacacaagaggtctggaaacacact 115
           |||||||||||||||||||| |||| |||||||||
Sbjct: 707 gttcacataaaacacaagagatctgaaaacacact 673



 Score = 42.1 bits (21), Expect = 0.61
 Identities = 40/45 (88%), Gaps = 1/45 (2%)
 Strand = Plus / Minus

                                                        
Query: 145 atccgttttagcagctacagctaggtaggatgcttaactggaaat 189
           |||| |||||||  |||||||||| |||||||||| |||||||||
Sbjct: 651 atcctttttagcgactacagctag-taggatgcttcactggaaat 608
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 54.0 bits (27), Expect = 2e-04
 Identities = 33/35 (94%)
 Strand = Plus / Plus

                                                   
Query: 81       gttcacataaaacacaagaggtctggaaacacact 115
                |||||||||||||||||||| |||| |||||||||
Sbjct: 29144294 gttcacataaaacacaagagatctgaaaacacact 29144328



 Score = 42.1 bits (21), Expect = 0.61
 Identities = 40/45 (88%), Gaps = 1/45 (2%)
 Strand = Plus / Plus

                                                             
Query: 145      atccgttttagcagctacagctaggtaggatgcttaactggaaat 189
                |||| |||||||  |||||||||| |||||||||| |||||||||
Sbjct: 29144350 atcctttttagcgactacagctag-taggatgcttcactggaaat 29144393
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>dbj|AP003813.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OJ1150_E04
          Length = 130973

 Score = 54.0 bits (27), Expect = 2e-04
 Identities = 33/35 (94%)
 Strand = Plus / Plus

                                                
Query: 81    gttcacataaaacacaagaggtctggaaacacact 115
             |||||||||||||||||||| |||| |||||||||
Sbjct: 79412 gttcacataaaacacaagagatctgaaaacacact 79446



 Score = 42.1 bits (21), Expect = 0.61
 Identities = 40/45 (88%), Gaps = 1/45 (2%)
 Strand = Plus / Plus

                                                          
Query: 145   atccgttttagcagctacagctaggtaggatgcttaactggaaat 189
             |||| |||||||  |||||||||| |||||||||| |||||||||
Sbjct: 79468 atcctttttagcgactacagctag-taggatgcttcactggaaat 79511
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>dbj|AP003818.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OJ1200_C08
          Length = 106214

 Score = 54.0 bits (27), Expect = 2e-04
 Identities = 33/35 (94%)
 Strand = Plus / Plus

                                                
Query: 81    gttcacataaaacacaagaggtctggaaacacact 115
             |||||||||||||||||||| |||| |||||||||
Sbjct: 92251 gttcacataaaacacaagagatctgaaaacacact 92285



 Score = 42.1 bits (21), Expect = 0.61
 Identities = 40/45 (88%), Gaps = 1/45 (2%)
 Strand = Plus / Plus

                                                          
Query: 145   atccgttttagcagctacagctaggtaggatgcttaactggaaat 189
             |||| |||||||  |||||||||| |||||||||| |||||||||
Sbjct: 92307 atcctttttagcgactacagctag-taggatgcttcactggaaat 92350
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>dbj|AK104031.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-020-D10, full
           insert sequence
          Length = 634

 Score = 54.0 bits (27), Expect = 2e-04
 Identities = 33/35 (94%)
 Strand = Plus / Minus

                                              
Query: 81  gttcacataaaacacaagaggtctggaaacacact 115
           |||||||||||||||||||| |||| |||||||||
Sbjct: 543 gttcacataaaacacaagagatctgaaaacacact 509



 Score = 42.1 bits (21), Expect = 0.61
 Identities = 40/45 (88%), Gaps = 1/45 (2%)
 Strand = Plus / Minus

                                                        
Query: 145 atccgttttagcagctacagctaggtaggatgcttaactggaaat 189
           |||| |||||||  |||||||||| |||||||||| |||||||||
Sbjct: 487 atcctttttagcgactacagctag-taggatgcttcactggaaat 444
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>dbj|AK071852.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023117O08, full
           insert sequence
          Length = 731

 Score = 52.0 bits (26), Expect = 6e-04
 Identities = 32/34 (94%)
 Strand = Plus / Minus

                                             
Query: 81  gttcacataaaacacaagaggtctggaaacacac 114
           |||||||||||||||||||| |||| ||||||||
Sbjct: 640 gttcacataaaacacaagagatctgaaaacacac 607



 Score = 42.1 bits (21), Expect = 0.61
 Identities = 40/45 (88%), Gaps = 1/45 (2%)
 Strand = Plus / Minus

                                                        
Query: 145 atccgttttagcagctacagctaggtaggatgcttaactggaaat 189
           |||| |||||||  |||||||||| |||||||||| |||||||||
Sbjct: 584 atcctttttagcgactacagctag-taggatgcttcactggaaat 541
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>gb|AF170961.1|AF170961 Calopteryx aequabilis 16S ribosomal RNA gene, partial sequence
          Length = 525

 Score = 42.1 bits (21), Expect = 0.61
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 83  tcacataaaacacaagaggtc 103
           |||||||||||||||||||||
Sbjct: 496 tcacataaaacacaagaggtc 516
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>emb|CR388143.6| Zebrafish DNA sequence from clone DKEY-189O20 in linkage group 21,
             complete sequence
          Length = 243457

 Score = 40.1 bits (20), Expect = 2.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 81    gttcacataaaacacaagag 100
             ||||||||||||||||||||
Sbjct: 63103 gttcacataaaacacaagag 63084
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>emb|BX511021.9| Zebrafish DNA sequence from clone DKEY-16P21 in linkage group 3, complete
              sequence
          Length = 235632

 Score = 40.1 bits (20), Expect = 2.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 78     caagttcacataaaacacaa 97
              ||||||||||||||||||||
Sbjct: 166846 caagttcacataaaacacaa 166865
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>gb|CP000020.1| Vibrio fischeri ES114 chromosome I, complete sequence
          Length = 2906179

 Score = 40.1 bits (20), Expect = 2.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 10     agcagaagttgatgagaaaa 29
              ||||||||||||||||||||
Sbjct: 977815 agcagaagttgatgagaaaa 977834
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>gb|AC097176.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1576_F01,
             complete sequence
          Length = 119525

 Score = 38.2 bits (19), Expect = 9.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 77    acaagttcacataaaacac 95
             |||||||||||||||||||
Sbjct: 63734 acaagttcacataaaacac 63752
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>gb|BT017311.1| Zea mays clone EL01N0317H06.c mRNA sequence
          Length = 1194

 Score = 38.2 bits (19), Expect = 9.6
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                  
Query: 5   agcgaagcagaagttgatgagaa 27
           |||||||||||||||| ||||||
Sbjct: 456 agcgaagcagaagttggtgagaa 478
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>gb|BT016176.1| Zea mays clone Contig9 mRNA sequence
          Length = 885

 Score = 38.2 bits (19), Expect = 9.6
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                  
Query: 5   agcgaagcagaagttgatgagaa 27
           |||||||||||||||| ||||||
Sbjct: 883 agcgaagcagaagttggtgagaa 861
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>gb|AC159092.11| Mus musculus chromosome 1, clone RP23-103C13, complete sequence
          Length = 196891

 Score = 38.2 bits (19), Expect = 9.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 20    gatgagaaaatatactaca 38
             |||||||||||||||||||
Sbjct: 60861 gatgagaaaatatactaca 60879
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>gb|AC114986.13| Mus musculus chromosome 1, clone RP23-242G7, complete sequence
          Length = 195146

 Score = 38.2 bits (19), Expect = 9.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 20    gatgagaaaatatactaca 38
             |||||||||||||||||||
Sbjct: 99491 gatgagaaaatatactaca 99509
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>gb|AC140275.3| Mus musculus BAC clone RP24-312F4 from chromosome 19, complete
           sequence
          Length = 173022

 Score = 38.2 bits (19), Expect = 9.6
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                  
Query: 110 cacactggagagcatagcaggaa 132
           |||||||||||||| ||||||||
Sbjct: 931 cacactggagagcagagcaggaa 909
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>gb|AC122261.2| Mus musculus BAC clone RP23-187F24 from 15, complete sequence
          Length = 223801

 Score = 38.2 bits (19), Expect = 9.6
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                     
Query: 15     aagttgatgagaaaatatactac 37
              ||||| |||||||||||||||||
Sbjct: 124463 aagttaatgagaaaatatactac 124485
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>gb|AC108513.3| Homo sapiens BAC clone RP13-936H15 from 7, complete sequence
          Length = 166667

 Score = 38.2 bits (19), Expect = 9.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 103   ctggaaacacactggagag 121
             |||||||||||||||||||
Sbjct: 37565 ctggaaacacactggagag 37583
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>gb|AC118931.8| Mus musculus chromosome 19, clone RP24-118A21, complete sequence
          Length = 233367

 Score = 38.2 bits (19), Expect = 9.6
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 110   cacactggagagcatagcaggaa 132
             |||||||||||||| ||||||||
Sbjct: 50160 cacactggagagcagagcaggaa 50182
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>emb|Z11546.1|ZMCHHSP60 Z.mays mRNA for mitochondrial chaperonin hsp60
          Length = 2138

 Score = 38.2 bits (19), Expect = 9.6
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                   
Query: 5    agcgaagcagaagttgatgagaa 27
            |||||||||||||||| ||||||
Sbjct: 1311 agcgaagcagaagttggtgagaa 1333
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>emb|Z12114.1|ZMCPNAGA Z.mays CPNA gene encoding mitochondrial chaperonin-60
          Length = 2247

 Score = 38.2 bits (19), Expect = 9.6
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                   
Query: 5    agcgaagcagaagttgatgagaa 27
            |||||||||||||||| ||||||
Sbjct: 1439 agcgaagcagaagttggtgagaa 1461
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>emb|CR857144.1| Pongo pygmaeus mRNA; cDNA DKFZp469A1421 (from clone DKFZp469A1421)
          Length = 3484

 Score = 38.2 bits (19), Expect = 9.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 8    gaagcagaagttgatgaga 26
            |||||||||||||||||||
Sbjct: 2248 gaagcagaagttgatgaga 2230
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>emb|AJ252242.1|PSE252242 pea seed-borne mosaic virus complete genome
          Length = 9905

 Score = 38.2 bits (19), Expect = 9.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 97   agaggtctggaaacacact 115
            |||||||||||||||||||
Sbjct: 8403 agaggtctggaaacacact 8421
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>ref|NM_059759.2| Caenorhabditis elegans D2005.4 (D2005.4) mRNA, complete cds
          Length = 3793

 Score = 38.2 bits (19), Expect = 9.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 8    gaagcagaagttgatgaga 26
            |||||||||||||||||||
Sbjct: 1196 gaagcagaagttgatgaga 1214
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>gb|AF170960.1|AF170960 Calopteryx maculata 16S ribosomal RNA gene, partial sequence
          Length = 525

 Score = 38.2 bits (19), Expect = 9.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 83  tcacataaaacacaagagg 101
           |||||||||||||||||||
Sbjct: 496 tcacataaaacacaagagg 514
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>gb|AF170959.1|AF170959 Calopteryx dimidiata 16S ribosomal RNA gene, partial sequence
          Length = 523

 Score = 38.2 bits (19), Expect = 9.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 83  tcacataaaacacaagagg 101
           |||||||||||||||||||
Sbjct: 494 tcacataaaacacaagagg 512
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>dbj|AK078575.1| Mus musculus 11 days embryo gonad cDNA, RIKEN full-length enriched
           library, clone:7030408E13 product:unclassifiable, full
           insert sequence
          Length = 2619

 Score = 38.2 bits (19), Expect = 9.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 20  gatgagaaaatatactaca 38
           |||||||||||||||||||
Sbjct: 307 gatgagaaaatatactaca 325
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>emb|BX005156.9| Zebrafish DNA sequence from clone CH211-165F21 in linkage group 8,
             complete sequence
          Length = 77418

 Score = 38.2 bits (19), Expect = 9.6
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 99    aggtctggaaacacactggagag 121
             ||||||| |||||||||||||||
Sbjct: 26590 aggtctgaaaacacactggagag 26568
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 38.2 bits (19), Expect = 9.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                   
Query: 77       acaagttcacataaaacac 95
                |||||||||||||||||||
Sbjct: 22015248 acaagttcacataaaacac 22015266
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>gb|AC091167.19| Homo sapiens chromosome 15, clone RP11-697E2, complete sequence
          Length = 202381

 Score = 38.2 bits (19), Expect = 9.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 28    aatatactacagacgggcc 46
             |||||||||||||||||||
Sbjct: 34441 aatatactacagacgggcc 34423
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>gb|AC135893.2| Homo sapiens 3 BAC RP11-643E20 (Roswell Park Cancer Institute Human
            BAC Library) complete sequence
          Length = 165735

 Score = 38.2 bits (19), Expect = 9.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 75   acacaagttcacataaaac 93
            |||||||||||||||||||
Sbjct: 9174 acacaagttcacataaaac 9192
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>gb|AC102898.15| Mus musculus chromosome 7, clone RP24-321O23, complete sequence
          Length = 173253

 Score = 38.2 bits (19), Expect = 9.6
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                     
Query: 13     agaagttgatgagaaaatatact 35
              |||| ||||||||||||||||||
Sbjct: 110138 agaaattgatgagaaaatatact 110160
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>gb|AC109220.16| Mus musculus chromosome 7, clone RP23-84B11, complete sequence
          Length = 212018

 Score = 38.2 bits (19), Expect = 9.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 155    gcagctacagctaggtagg 173
              |||||||||||||||||||
Sbjct: 111464 gcagctacagctaggtagg 111446
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>dbj|AK108341.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-142-A12, full
           insert sequence
          Length = 889

 Score = 38.2 bits (19), Expect = 9.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 77  acaagttcacataaaacac 95
           |||||||||||||||||||
Sbjct: 738 acaagttcacataaaacac 720
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>gb|BT023997.1| Zea mays clone EL01N0314G02 mRNA sequence
          Length = 2188

 Score = 38.2 bits (19), Expect = 9.6
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                   
Query: 5    agcgaagcagaagttgatgagaa 27
            |||||||||||||||| ||||||
Sbjct: 1362 agcgaagcagaagttggtgagaa 1384
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>gb|AY109623.1| Zea mays CL2221_1 mRNA sequence
          Length = 2265

 Score = 38.2 bits (19), Expect = 9.6
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                   
Query: 5    agcgaagcagaagttgatgagaa 27
            |||||||||||||||| ||||||
Sbjct: 1439 agcgaagcagaagttggtgagaa 1461
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>gb|AC125134.3| Mus musculus BAC clone RP24-316C22 from 1, complete sequence
          Length = 188348

 Score = 38.2 bits (19), Expect = 9.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 20     gatgagaaaatatactaca 38
              |||||||||||||||||||
Sbjct: 149133 gatgagaaaatatactaca 149151
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>emb|AL672019.7| Mouse DNA sequence from clone RP23-33P21 on chromosome X, complete
             sequence
          Length = 192874

 Score = 38.2 bits (19), Expect = 9.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 13    agaagttgatgagaaaata 31
             |||||||||||||||||||
Sbjct: 92562 agaagttgatgagaaaata 92544
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>gb|L21006.1|MZECPN60X Zea mays mitochondrial chaperonin 60 (mtcpn60II) mRNA, complete cds
          Length = 2139

 Score = 38.2 bits (19), Expect = 9.6
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                   
Query: 5    agcgaagcagaagttgatgagaa 27
            |||||||||||||||| ||||||
Sbjct: 1403 agcgaagcagaagttggtgagaa 1425
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>gb|L21008.1|MZECPN60B Corn nuclear-encoded mitochondrial chaperonin 60 (cpn60II) gene,
            complete cds
          Length = 7905

 Score = 38.2 bits (19), Expect = 9.6
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                   
Query: 5    agcgaagcagaagttgatgagaa 27
            |||||||||||||||| ||||||
Sbjct: 6061 agcgaagcagaagttggtgagaa 6083
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>gb|L21007.1|MZECPN60A Corn nuclear-encoded mitochondrial chaperonin 60 (cpn60I) gene,
            complete cds
          Length = 6575

 Score = 38.2 bits (19), Expect = 9.6
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                   
Query: 5    agcgaagcagaagttgatgagaa 27
            |||||||||||||||| ||||||
Sbjct: 4971 agcgaagcagaagttggtgagaa 4993


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,657,524
Number of Sequences: 3902068
Number of extensions: 1657524
Number of successful extensions: 115842
Number of sequences better than 10.0: 46
Number of HSP's better than 10.0 without gapping: 46
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 115686
Number of HSP's gapped (non-prelim): 155
length of query: 193
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 171
effective length of database: 17,147,199,772
effective search space: 2932171161012
effective search space used: 2932171161012
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)
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