ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags25j06
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|NM_197006.1| Oryza sativa (japonica cultivar-group) hypothet... 258 2e-65
2dbj|AK067258.1| Oryza sativa (japonica cultivar-group) cDNA clon... 244 4e-61
3gb|AC078829.10| Oryza sativa chromosome 10 BAC OSJNBa0026O12 gen... 240 6e-60
4dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 240 6e-60
5gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 240 6e-60
6gb|AY111823.1| Zea mays CL62719_1 mRNA sequence 200 5e-48
7gb|BT018391.1| Zea mays clone EL01N0318A05.d mRNA sequence 190 5e-45
8ref|NM_100323.2| Arabidopsis thaliana unknown protein AT1G04430 ... 64 7e-07
9gb|AY081460.1| Arabidopsis thaliana unknown protein (At1g04430) ... 64 7e-07
10gb|AY064624.1| Arabidopsis thaliana unknown protein (At1g04430; ... 64 7e-07
11dbj|AK222007.1| Arabidopsis thaliana mRNA for hypothetical prote... 64 7e-07
12gb|AY054530.1| Arabidopsis thaliana Unknown protein (At1g04430; ... 64 7e-07
13gb|AF387011.1|AF387011 Arabidopsis thaliana Unknown protein (F19... 64 7e-07
14gb|AY084457.1| Arabidopsis thaliana clone 108617 mRNA, complete ... 64 7e-07
15gb|BT012736.1| Lycopersicon esculentum clone 113674R, mRNA sequence 58 4e-05
16gb|AC000104.1|F19P19 Sequence of BAC F19P19 from Arabidopsis tha... 58 4e-05
17ref|XM_473548.1| Oryza sativa (japonica cultivar-group), predic... 54 7e-04
18gb|BT013574.1| Lycopersicon esculentum clone 132316F, mRNA sequence 54 7e-04
19ref|NM_202090.1| Arabidopsis thaliana unknown protein AT1G13860 ... 50 0.011
20ref|NM_179326.1| Arabidopsis thaliana unknown protein AT1G13860 ... 50 0.011
21ref|NM_101252.2| Arabidopsis thaliana unknown protein AT1G13860 ... 50 0.011
22ref|NM_179325.2| Arabidopsis thaliana S-adenosylmethionine-depen... 50 0.011
23emb|BX816641.1|CNS0AELL Arabidopsis thaliana Full-length cDNA Co... 50 0.011
24dbj|AK117344.1| Arabidopsis thaliana At1g13860 mRNA for unknown ... 50 0.011
25dbj|AK121243.1| Oryza sativa (japonica cultivar-group) cDNA clon... 50 0.011
26ref|NM_102449.2| Arabidopsis thaliana unknown protein AT1G26850 ... 48 0.042
27ref|NM_179379.1| Arabidopsis thaliana unknown protein AT1G26850 ... 48 0.042
28ref|NM_197007.1| Oryza sativa (japonica cultivar-group) unknown ... 48 0.042
29gb|BT000640.1| Arabidopsis thaliana At1g26850/T2P11_4 mRNA, comp... 48 0.042
30emb|AJ810709.1| Poa pratensis mRNA for Ankyrin protein kinase-li... 48 0.042
31gb|AY037230.1| Arabidopsis thaliana At1g26850/T2P11_4 mRNA, comp... 48 0.042
32gb|AY106619.1| Zea mays PCO092688 mRNA sequence 48 0.042
33ref|XM_474908.1| Oryza sativa (japonica cultivar-group), predic... 46 0.17
34dbj|AK065174.1| Oryza sativa (japonica cultivar-group) cDNA clon... 46 0.17
35gb|AC144706.2| Danio rerio clone CH211-164M18, complete sequence 44 0.66
36emb|BX248086.8| Zebrafish DNA sequence from clone CH211-277E21 i... 44 0.66
37ref|NM_201681.1| Arabidopsis thaliana unknown protein AT2G03480 ... 42 2.6
38ref|NM_126399.2| Arabidopsis thaliana ATP binding AT2G03480 tran... 42 2.6
39ref|NM_111855.2| Arabidopsis thaliana unknown protein AT3G10200 ... 42 2.6
40emb|CR786572.20| Zebrafish DNA sequence from clone DKEY-258F14 i... 42 2.6
41gb|BT001040.1| Arabidopsis thaliana At2g03480/T4M8.9 mRNA, compl... 42 2.6
42emb|Z82201.1|HS345P10 Human DNA sequence from clone RP3-345P10 o... 42 2.6
43gb|AC090677.13| Homo sapiens 12 BAC RP11-637N6 (Roswell Park Can... 42 2.6
44gb|AC010587.6| Homo sapiens chromosome 5 clone CTC-394G3, comple... 42 2.6
45gb|AC010372.6| Homo sapiens chromosome 5 clone CTD-2049O16, comp... 42 2.6
46gb|AY039849.1| Arabidopsis thaliana At2g03480/T4M8.9 mRNA, compl... 42 2.6
47gb|BT005741.1| Arabidopsis thaliana clone RAFL15-40-C20 (R50008)... 42 2.6
48dbj|AK102287.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 2.6
49gb|DQ332727.1| Synthetic construct Saccharomyces cerevisiae clon... 42 2.6
50dbj|AP001496.4| Homo sapiens genomic DNA, chromosome 18 clone:RP... 42 2.6
51emb|AL805968.6| Mouse DNA sequence from clone RP23-424G19 on chr... 42 2.6
52dbj|D50617.1|YSCCHRVIN Saccharomyces cerevisiae chromosome VI co... 42 2.6 
>ref|NM_197006.1| Oryza sativa (japonica cultivar-group) hypothetical protein
            (OSJNBa0026O12.9), mRNA
          Length = 1855

 Score =  258 bits (130), Expect = 2e-65
 Identities = 265/310 (85%)
 Strand = Plus / Minus

                                                                        
Query: 439  ctggtagccacaatttctttctgattatgagtatcatttcgttctcctcagattccggac 498
            ||||| ||||||||||||| | ||||||||  |||||||| |||||||||||||| ||||
Sbjct: 1825 ctggttgccacaatttcttccggattatgaagatcatttcattctcctcagattctggac 1766

                                                                        
Query: 499  tggactcgccatccacaacagttactgcctcccagtgaagtgcattgaggtacttcttga 558
            | |||||| |||| |||   |||||||| |||||||||||||| |||||||| |||||||
Sbjct: 1765 ttgactcggcatctacagttgttactgcttcccagtgaagtgcgttgaggtatttcttga 1706

                                                                        
Query: 559  tgaatacaatgataggggccttgtctctcacgatgataaaaccagttggcctgagtatac 618
            ||||| | |||| || | |||||||||||||||||||||| ||| | ||||| |  || |
Sbjct: 1705 tgaattcgatgacagtgtccttgtctctcacgatgataaatccactaggcctaacgatgc 1646

                                                                        
Query: 619  gatccatttcaaggagcagatcttcagcactgcaacctcttttctcaaggtcggtgaaga 678
            | ||||||||||| || |||||||| || ||||||||||| || |||||||| | |||||
Sbjct: 1645 ggtccatttcaagcaggagatcttctgcgctgcaacctctcttgtcaaggtcagagaaga 1586

                                                                        
Query: 679  ctgtccacgcgtgcagaagatcatacgttcgaggataagtagagaatgcctcacaccagt 738
            ||||||| || || ||||||||||| ||||||||||| || |||||||| ||||||||||
Sbjct: 1585 ctgtccatgcatggagaagatcatatgttcgaggataggttgagaatgcttcacaccagt 1526

                      
Query: 739  catgtgtaga 748
            |||| |||||
Sbjct: 1525 catgagtaga 1516
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>dbj|AK067258.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013095H15, full
            insert sequence
          Length = 2438

 Score =  244 bits (123), Expect = 4e-61
 Identities = 264/310 (85%), Gaps = 2/310 (0%)
 Strand = Plus / Minus

                                                                        
Query: 439  ctggtagccacaatttctttctgattatgagtatcatttcgttctcctcagattccggac 498
            ||||| ||||||||||||| | ||||||||  |||||||| |||||||||||||| ||||
Sbjct: 2121 ctggttgccacaatttcttccggattatgaagatcatttcattctcctcagattctggac 2062

                                                                        
Query: 499  tggactcgccatccacaacagttactgcctcccagtgaagtgcattgaggtacttcttga 558
            | |||||| |||| |||   |||||||| |||||||||||||| |||||||| |||||||
Sbjct: 2061 ttgactcggcatctacagttgttactgcttcccagtgaagtgcgttgaggtatttcttga 2002

                                                                        
Query: 559  tgaatacaatgataggggccttgtctctcacgatgataaaaccagttggcctgagtatac 618
            ||||| | |||| || | |||||||||||||||||||||| ||| | ||||| |  || |
Sbjct: 2001 tgaattcgatgacagtgtccttgtctctcacgatgataaatccactaggcctaacgatgc 1942

                                                                        
Query: 619  gatccatttcaaggagcagatcttcagcactgcaacctcttttctcaaggtcggtgaaga 678
            | ||||||||||| || |||||||| || ||||||||||| || |||||||| | |||||
Sbjct: 1941 ggtccatttcaagcaggagatcttctgcgctgcaacctctcttgtcaaggtcagagaaga 1882

                                                                        
Query: 679  ctgtccacgcgtgcagaagatcatacgttcgaggataagtagagaatgcctcacaccagt 738
            ||||||| || || ||||||||||  ||||||||||| || |||||||| ||||||||||
Sbjct: 1881 ctgtccatgcatggagaagatcat--gttcgaggataggttgagaatgcttcacaccagt 1824

                      
Query: 739  catgtgtaga 748
            |||| |||||
Sbjct: 1823 catgagtaga 1814



 Score = 48.1 bits (24), Expect = 0.042
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                            
Query: 136  tttatttcctaaccaggctagagaacaaacat 167
            ||||||||||||| || |||||||||||||||
Sbjct: 2419 tttatttcctaacaagactagagaacaaacat 2388



 Score = 48.1 bits (24), Expect = 0.042
 Identities = 36/40 (90%)
 Strand = Plus / Minus

                                                    
Query: 356  cttcttggctcctgagctgcagatgctgacggtgccaaag 395
            |||||||||| |||||||||||||||| || |||| ||||
Sbjct: 2207 cttcttggcttctgagctgcagatgctcacagtgcgaaag 2168
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>gb|AC078829.10| Oryza sativa chromosome 10 BAC OSJNBa0026O12 genomic sequence, complete
             sequence
          Length = 163279

 Score =  240 bits (121), Expect = 6e-60
 Identities = 253/297 (85%)
 Strand = Plus / Plus

                                                                         
Query: 439   ctggtagccacaatttctttctgattatgagtatcatttcgttctcctcagattccggac 498
             ||||| ||||||||||||| | ||||||||  |||||||| |||||||||||||| ||||
Sbjct: 87871 ctggttgccacaatttcttccggattatgaagatcatttcattctcctcagattctggac 87930

                                                                         
Query: 499   tggactcgccatccacaacagttactgcctcccagtgaagtgcattgaggtacttcttga 558
             | |||||| |||| |||   |||||||| |||||||||||||| |||||||| |||||||
Sbjct: 87931 ttgactcggcatctacagttgttactgcttcccagtgaagtgcgttgaggtatttcttga 87990

                                                                         
Query: 559   tgaatacaatgataggggccttgtctctcacgatgataaaaccagttggcctgagtatac 618
             ||||| | |||| || | |||||||||||||||||||||| ||| | ||||| |  || |
Sbjct: 87991 tgaattcgatgacagtgtccttgtctctcacgatgataaatccactaggcctaacgatgc 88050

                                                                         
Query: 619   gatccatttcaaggagcagatcttcagcactgcaacctcttttctcaaggtcggtgaaga 678
             | ||||||||||| || |||||||| || ||||||||||| || |||||||| | |||||
Sbjct: 88051 ggtccatttcaagcaggagatcttctgcgctgcaacctctcttgtcaaggtcagagaaga 88110

                                                                      
Query: 679   ctgtccacgcgtgcagaagatcatacgttcgaggataagtagagaatgcctcacacc 735
             ||||||| || || ||||||||||| ||||||||||| || |||||||| |||||||
Sbjct: 88111 ctgtccatgcatggagaagatcatatgttcgaggataggttgagaatgcttcacacc 88167



 Score = 48.1 bits (24), Expect = 0.042
 Identities = 36/40 (90%)
 Strand = Plus / Plus

                                                     
Query: 356   cttcttggctcctgagctgcagatgctgacggtgccaaag 395
             |||||||||| |||||||||||||||| || |||| ||||
Sbjct: 87785 cttcttggcttctgagctgcagatgctcacagtgcgaaag 87824



 Score = 48.1 bits (24), Expect = 0.042
 Identities = 30/32 (93%)
 Strand = Plus / Plus

                                             
Query: 136   tttatttcctaaccaggctagagaacaaacat 167
             ||||||||||||| || |||||||||||||||
Sbjct: 87573 tttatttcctaacaagactagagaacaaacat 87604
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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score =  240 bits (121), Expect = 6e-60
 Identities = 253/297 (85%)
 Strand = Plus / Minus

                                                                            
Query: 439      ctggtagccacaatttctttctgattatgagtatcatttcgttctcctcagattccggac 498
                ||||| ||||||||||||| | ||||||||  |||||||| |||||||||||||| ||||
Sbjct: 17284408 ctggttgccacaatttcttccggattatgaagatcatttcattctcctcagattctggac 17284349

                                                                            
Query: 499      tggactcgccatccacaacagttactgcctcccagtgaagtgcattgaggtacttcttga 558
                | |||||| |||| |||   |||||||| |||||||||||||| |||||||| |||||||
Sbjct: 17284348 ttgactcggcatctacagttgttactgcttcccagtgaagtgcgttgaggtatttcttga 17284289

                                                                            
Query: 559      tgaatacaatgataggggccttgtctctcacgatgataaaaccagttggcctgagtatac 618
                ||||| | |||| || | |||||||||||||||||||||| ||| | ||||| |  || |
Sbjct: 17284288 tgaattcgatgacagtgtccttgtctctcacgatgataaatccactaggcctaacgatgc 17284229

                                                                            
Query: 619      gatccatttcaaggagcagatcttcagcactgcaacctcttttctcaaggtcggtgaaga 678
                | ||||||||||| || |||||||| || ||||||||||| || |||||||| | |||||
Sbjct: 17284228 ggtccatttcaagcaggagatcttctgcgctgcaacctctcttgtcaaggtcagagaaga 17284169

                                                                         
Query: 679      ctgtccacgcgtgcagaagatcatacgttcgaggataagtagagaatgcctcacacc 735
                ||||||| || || ||||||||||| ||||||||||| || |||||||| |||||||
Sbjct: 17284168 ctgtccatgcatggagaagatcatatgttcgaggataggttgagaatgcttcacacc 17284112



 Score = 48.1 bits (24), Expect = 0.042
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                                
Query: 136      tttatttcctaaccaggctagagaacaaacat 167
                ||||||||||||| || |||||||||||||||
Sbjct: 17284706 tttatttcctaacaagactagagaacaaacat 17284675



 Score = 48.1 bits (24), Expect = 0.042
 Identities = 36/40 (90%)
 Strand = Plus / Minus

                                                        
Query: 356      cttcttggctcctgagctgcagatgctgacggtgccaaag 395
                |||||||||| |||||||||||||||| || |||| ||||
Sbjct: 17284494 cttcttggcttctgagctgcagatgctcacagtgcgaaag 17284455
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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score =  240 bits (121), Expect = 6e-60
 Identities = 253/297 (85%)
 Strand = Plus / Minus

                                                                            
Query: 439      ctggtagccacaatttctttctgattatgagtatcatttcgttctcctcagattccggac 498
                ||||| ||||||||||||| | ||||||||  |||||||| |||||||||||||| ||||
Sbjct: 17293448 ctggttgccacaatttcttccggattatgaagatcatttcattctcctcagattctggac 17293389

                                                                            
Query: 499      tggactcgccatccacaacagttactgcctcccagtgaagtgcattgaggtacttcttga 558
                | |||||| |||| |||   |||||||| |||||||||||||| |||||||| |||||||
Sbjct: 17293388 ttgactcggcatctacagttgttactgcttcccagtgaagtgcgttgaggtatttcttga 17293329

                                                                            
Query: 559      tgaatacaatgataggggccttgtctctcacgatgataaaaccagttggcctgagtatac 618
                ||||| | |||| || | |||||||||||||||||||||| ||| | ||||| |  || |
Sbjct: 17293328 tgaattcgatgacagtgtccttgtctctcacgatgataaatccactaggcctaacgatgc 17293269

                                                                            
Query: 619      gatccatttcaaggagcagatcttcagcactgcaacctcttttctcaaggtcggtgaaga 678
                | ||||||||||| || |||||||| || ||||||||||| || |||||||| | |||||
Sbjct: 17293268 ggtccatttcaagcaggagatcttctgcgctgcaacctctcttgtcaaggtcagagaaga 17293209

                                                                         
Query: 679      ctgtccacgcgtgcagaagatcatacgttcgaggataagtagagaatgcctcacacc 735
                ||||||| || || ||||||||||| ||||||||||| || |||||||| |||||||
Sbjct: 17293208 ctgtccatgcatggagaagatcatatgttcgaggataggttgagaatgcttcacacc 17293152



 Score = 48.1 bits (24), Expect = 0.042
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                                
Query: 136      tttatttcctaaccaggctagagaacaaacat 167
                ||||||||||||| || |||||||||||||||
Sbjct: 17293746 tttatttcctaacaagactagagaacaaacat 17293715



 Score = 48.1 bits (24), Expect = 0.042
 Identities = 36/40 (90%)
 Strand = Plus / Minus

                                                        
Query: 356      cttcttggctcctgagctgcagatgctgacggtgccaaag 395
                |||||||||| |||||||||||||||| || |||| ||||
Sbjct: 17293534 cttcttggcttctgagctgcagatgctcacagtgcgaaag 17293495
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>gb|AY111823.1| Zea mays CL62719_1 mRNA sequence
          Length = 587

 Score =  200 bits (101), Expect = 5e-48
 Identities = 239/285 (83%)
 Strand = Plus / Minus

                                                                       
Query: 440 tggtagccacaatttctttctgattatgagtatcatttcgttctcctcagattccggact 499
           |||||||||||  ||||| | |||||| |  ||||||||| ||||||| ||||| || ||
Sbjct: 287 tggtagccacagcttcttccggattatcaagatcatttcgctctcctctgattctgggct 228

                                                                       
Query: 500 ggactcgccatccacaacagttactgcctcccagtgaagtgcattgaggtacttcttgat 559
           || |||  | ||||| ||||| | |||||||||||||||||| | |||||||||||||||
Sbjct: 227 gggctcagcgtccacgacagtcaatgcctcccagtgaagtgcgtggaggtacttcttgat 168

                                                                       
Query: 560 gaatacaatgataggggccttgtctctcacgatgataaaaccagttggcctgagtatacg 619
           |||  ||||||  | | ||||||| |||||||||  ||| ||||| |||||||| |||||
Sbjct: 167 gaactcaatgacggtgcccttgtccctcacgatggcaaacccagtcggcctgaggatacg 108

                                                                       
Query: 620 atccatttcaaggagcagatcttcagcactgcaacctcttttctcaaggtcggtgaagac 679
           |||||||||||||||||| ||||| |||||||| |||||||| |||||||| |  |||||
Sbjct: 107 atccatttcaaggagcaggtcttcggcactgcagcctcttttatcaaggtcagaaaagac 48

                                                        
Query: 680 tgtccacgcgtgcagaagatcatacgttcgaggataagtagagaa 724
           || ||| ||||| |||||||| || ||||||||||| || |||||
Sbjct: 47  tgcccatgcgtggagaagatcgtatgttcgaggataggttgagaa 3
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>gb|BT018391.1| Zea mays clone EL01N0318A05.d mRNA sequence
          Length = 1513

 Score =  190 bits (96), Expect = 5e-45
 Identities = 249/300 (83%)
 Strand = Plus / Minus

                                                                        
Query: 440  tggtagccacaatttctttctgattatgagtatcatttcgttctcctcagattccggact 499
            |||||||||||  ||||| | |||||| |  ||||||||| ||||||| ||||| || ||
Sbjct: 1179 tggtagccacagcttcttccggattatcaagatcatttcgctctcctctgattctgggct 1120

                                                                        
Query: 500  ggactcgccatccacaacagttactgcctcccagtgaagtgcattgaggtacttcttgat 559
            || |||  | ||||| ||||| | |||||||||||||||||| | |||||||||||||||
Sbjct: 1119 gggctcagcgtccacgacagtcaatgcctcccagtgaagtgcgtggaggtacttcttgat 1060

                                                                        
Query: 560  gaatacaatgataggggccttgtctctcacgatgataaaaccagttggcctgagtatacg 619
            |||  ||||||  | | ||||||| |||||||||  ||| ||||| |||||||| |||||
Sbjct: 1059 gaactcaatgacggtgcccttgtccctcacgatggcaaacccagtcggcctgaggatacg 1000

                                                                        
Query: 620  atccatttcaaggagcagatcttcagcactgcaacctcttttctcaaggtcggtgaagac 679
            |||||||  | ||||||| ||||| |||||||| |||||||| |||||||| |  |||||
Sbjct: 999  atccattcaagggagcaggtcttcggcactgcagcctcttttatcaaggtcagaaaagac 940

                                                                        
Query: 680  tgtccacgcgtgcagaagatcatacgttcgaggataagtagagaatgcctcacaccagtc 739
            || ||| ||||| |||||||| || ||||||||||| || ||||| || |||||||||||
Sbjct: 939  tgcccatgcgtggagaagatcgtatgttcgaggataggttgagaaggcttcacaccagtc 880
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>ref|NM_100323.2| Arabidopsis thaliana unknown protein AT1G04430 mRNA, complete cds
          Length = 2360

 Score = 63.9 bits (32), Expect = 7e-07
 Identities = 50/56 (89%)
 Strand = Plus / Minus

                                                                    
Query: 683  ccacgcgtgcagaagatcatacgttcgaggataagtagagaatgcctcacaccagt 738
            |||||||||||  ||||| || ||||||||||| |||||||| |||||||||||||
Sbjct: 1846 ccacgcgtgcaacagatcgtatgttcgaggatatgtagagaaagcctcacaccagt 1791
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>gb|AY081460.1| Arabidopsis thaliana unknown protein (At1g04430) mRNA, complete cds
          Length = 1923

 Score = 63.9 bits (32), Expect = 7e-07
 Identities = 50/56 (89%)
 Strand = Plus / Minus

                                                                    
Query: 683  ccacgcgtgcagaagatcatacgttcgaggataagtagagaatgcctcacaccagt 738
            |||||||||||  ||||| || ||||||||||| |||||||| |||||||||||||
Sbjct: 1584 ccacgcgtgcaacagatcgtatgttcgaggatatgtagagaaagcctcacaccagt 1529
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>gb|AY064624.1| Arabidopsis thaliana unknown protein (At1g04430; F19P19.11) mRNA,
            complete cds
          Length = 1892

 Score = 63.9 bits (32), Expect = 7e-07
 Identities = 50/56 (89%)
 Strand = Plus / Minus

                                                                    
Query: 683  ccacgcgtgcagaagatcatacgttcgaggataagtagagaatgcctcacaccagt 738
            |||||||||||  ||||| || ||||||||||| |||||||| |||||||||||||
Sbjct: 1584 ccacgcgtgcaacagatcgtatgttcgaggatatgtagagaaagcctcacaccagt 1529
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>dbj|AK222007.1| Arabidopsis thaliana mRNA for hypothetical protein, partial cds,
           clone: RAFL22-66-E03
          Length = 877

 Score = 63.9 bits (32), Expect = 7e-07
 Identities = 50/56 (89%)
 Strand = Plus / Minus

                                                                   
Query: 683 ccacgcgtgcagaagatcatacgttcgaggataagtagagaatgcctcacaccagt 738
           |||||||||||  ||||| || ||||||||||| |||||||| |||||||||||||
Sbjct: 448 ccacgcgtgcaacagatcgtatgttcgaggatatgtagagaaagcctcacaccagt 393
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>gb|AY054530.1| Arabidopsis thaliana Unknown protein (At1g04430; F19P19.11) mRNA,
            complete cds
          Length = 2172

 Score = 63.9 bits (32), Expect = 7e-07
 Identities = 50/56 (89%)
 Strand = Plus / Minus

                                                                    
Query: 683  ccacgcgtgcagaagatcatacgttcgaggataagtagagaatgcctcacaccagt 738
            |||||||||||  ||||| || ||||||||||| |||||||| |||||||||||||
Sbjct: 1722 ccacgcgtgcaacagatcgtatgttcgaggatatgtagagaaagcctcacaccagt 1667
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>gb|AF387011.1|AF387011 Arabidopsis thaliana Unknown protein (F19P19.11) mRNA, complete cds
          Length = 2175

 Score = 63.9 bits (32), Expect = 7e-07
 Identities = 50/56 (89%)
 Strand = Plus / Minus

                                                                    
Query: 683  ccacgcgtgcagaagatcatacgttcgaggataagtagagaatgcctcacaccagt 738
            |||||||||||  ||||| || ||||||||||| |||||||| |||||||||||||
Sbjct: 1759 ccacgcgtgcaacagatcgtatgttcgaggatatgtagagaaagcctcacaccagt 1704
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>gb|AY084457.1| Arabidopsis thaliana clone 108617 mRNA, complete sequence
          Length = 2070

 Score = 63.9 bits (32), Expect = 7e-07
 Identities = 50/56 (89%)
 Strand = Plus / Minus

                                                                    
Query: 683  ccacgcgtgcagaagatcatacgttcgaggataagtagagaatgcctcacaccagt 738
            |||||||||||  ||||| || ||||||||||| |||||||| |||||||||||||
Sbjct: 1772 ccacgcgtgcaacagatcgtatgttcgaggatatgtagagaaagcctcacaccagt 1717
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>gb|BT012736.1| Lycopersicon esculentum clone 113674R, mRNA sequence
          Length = 2362

 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 47/53 (88%)
 Strand = Plus / Minus

                                                                 
Query: 690  tgcagaagatcatacgttcgaggataagtagagaatgcctcacaccagtcatg 742
            ||||||||||| || || |||||||| || ||||| |||||||||||||||||
Sbjct: 1647 tgcagaagatcgtatgtccgaggatatgttgagaaagcctcacaccagtcatg 1595
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>gb|AC000104.1|F19P19 Sequence of BAC F19P19 from Arabidopsis thaliana chromosome 1, complete
             sequence
          Length = 107527

 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 47/53 (88%)
 Strand = Plus / Plus

                                                                  
Query: 683   ccacgcgtgcagaagatcatacgttcgaggataagtagagaatgcctcacacc 735
             |||||||||||  ||||| || ||||||||||| |||||||| ||||||||||
Sbjct: 32191 ccacgcgtgcaacagatcgtatgttcgaggatatgtagagaaagcctcacacc 32243
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>ref|XM_473548.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1761

 Score = 54.0 bits (27), Expect = 7e-04
 Identities = 42/47 (89%)
 Strand = Plus / Minus

                                                           
Query: 696  agatcatacgttcgaggataagtagagaatgcctcacaccagtcatg 742
            |||||||| || ||||||||||| ||||| | |||||||||||||||
Sbjct: 1487 agatcataggtacgaggataagttgagaaaggctcacaccagtcatg 1441
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>gb|BT013574.1| Lycopersicon esculentum clone 132316F, mRNA sequence
          Length = 2359

 Score = 54.0 bits (27), Expect = 7e-04
 Identities = 42/47 (89%)
 Strand = Plus / Minus

                                                           
Query: 696  agatcatacgttcgaggataagtagagaatgcctcacaccagtcatg 742
            |||||||| ||||||||||| || || || |||||||||||||||||
Sbjct: 1727 agatcatatgttcgaggataggtcgaaaaagcctcacaccagtcatg 1681
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>ref|NM_202090.1| Arabidopsis thaliana unknown protein AT1G13860 transcript variant
            AT1G13860.4 mRNA, complete cds
          Length = 2629

 Score = 50.1 bits (25), Expect = 0.011
 Identities = 40/45 (88%)
 Strand = Plus / Minus

                                                         
Query: 699  tcatacgttcgaggataagtagagaatgcctcacaccagtcatgt 743
            ||||| ||||||||||| |||| |||||  |||||||||||||||
Sbjct: 2082 tcatatgttcgaggataggtagggaatggttcacaccagtcatgt 2038
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>ref|NM_179326.1| Arabidopsis thaliana unknown protein AT1G13860 transcript variant
            AT1G13860.3 mRNA, complete cds
          Length = 2636

 Score = 50.1 bits (25), Expect = 0.011
 Identities = 40/45 (88%)
 Strand = Plus / Minus

                                                         
Query: 699  tcatacgttcgaggataagtagagaatgcctcacaccagtcatgt 743
            ||||| ||||||||||| |||| |||||  |||||||||||||||
Sbjct: 2082 tcatatgttcgaggataggtagggaatggttcacaccagtcatgt 2038
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>ref|NM_101252.2| Arabidopsis thaliana unknown protein AT1G13860 transcript variant
            AT1G13860.1 mRNA, complete cds
          Length = 2774

 Score = 50.1 bits (25), Expect = 0.011
 Identities = 40/45 (88%)
 Strand = Plus / Minus

                                                         
Query: 699  tcatacgttcgaggataagtagagaatgcctcacaccagtcatgt 743
            ||||| ||||||||||| |||| |||||  |||||||||||||||
Sbjct: 2082 tcatatgttcgaggataggtagggaatggttcacaccagtcatgt 2038
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>ref|NM_179325.2| Arabidopsis thaliana S-adenosylmethionine-dependent methyltransferase
            AT1G13860 transcript variant AT1G13860.2 mRNA, complete
            cds
          Length = 2528

 Score = 50.1 bits (25), Expect = 0.011
 Identities = 40/45 (88%)
 Strand = Plus / Minus

                                                         
Query: 699  tcatacgttcgaggataagtagagaatgcctcacaccagtcatgt 743
            ||||| ||||||||||| |||| |||||  |||||||||||||||
Sbjct: 2002 tcatatgttcgaggataggtagggaatggttcacaccagtcatgt 1958
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>emb|BX816641.1|CNS0AELL Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTPGH5ZG05 of Hormone Treated Callus of strain col-0 of
            Arabidopsis thaliana (thale cress)
          Length = 2432

 Score = 50.1 bits (25), Expect = 0.011
 Identities = 40/45 (88%)
 Strand = Plus / Minus

                                                         
Query: 699  tcatacgttcgaggataagtagagaatgcctcacaccagtcatgt 743
            ||||| ||||||||||| |||| |||||  |||||||||||||||
Sbjct: 1967 tcatatgttcgaggataggtagggaatggttcacaccagtcatgt 1923
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>dbj|AK117344.1| Arabidopsis thaliana At1g13860 mRNA for unknown protein, complete
            cds, clone: RAFL16-90-N03
          Length = 2745

 Score = 50.1 bits (25), Expect = 0.011
 Identities = 40/45 (88%)
 Strand = Plus / Minus

                                                         
Query: 699  tcatacgttcgaggataagtagagaatgcctcacaccagtcatgt 743
            ||||| ||||||||||| |||| |||||  |||||||||||||||
Sbjct: 2082 tcatatgttcgaggataggtagggaatggttcacaccagtcatgt 2038
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>dbj|AK121243.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023099B06, full
            insert sequence
          Length = 2310

 Score = 50.1 bits (25), Expect = 0.011
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                         
Query: 714  taagtagagaatgcctcacaccagtcatg 742
            ||||| |||||||||||||||||||||||
Sbjct: 1737 taagtggagaatgcctcacaccagtcatg 1709
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>ref|NM_102449.2| Arabidopsis thaliana unknown protein AT1G26850 transcript variant
            AT1G26850.1 mRNA, complete cds
          Length = 2420

 Score = 48.1 bits (24), Expect = 0.042
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                            
Query: 711  ggataagtagagaatgcctcacaccagtcatg 742
            ||||| |||||||| |||||||||||||||||
Sbjct: 1867 ggatatgtagagaaagcctcacaccagtcatg 1836
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>ref|NM_179379.1| Arabidopsis thaliana unknown protein AT1G26850 transcript variant
            AT1G26850.2 mRNA, complete cds
          Length = 2361

 Score = 48.1 bits (24), Expect = 0.042
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                            
Query: 711  ggataagtagagaatgcctcacaccagtcatg 742
            ||||| |||||||| |||||||||||||||||
Sbjct: 1808 ggatatgtagagaaagcctcacaccagtcatg 1777
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>ref|NM_197007.1| Oryza sativa (japonica cultivar-group) unknown protein
           (OSJNBa0026O12.3), mRNA
          Length = 511

 Score = 48.1 bits (24), Expect = 0.042
 Identities = 36/40 (90%)
 Strand = Plus / Plus

                                                   
Query: 356 cttcttggctcctgagctgcagatgctgacggtgccaaag 395
           |||||||||| |||||||||||||||| || |||| ||||
Sbjct: 439 cttcttggcttctgagctgcagatgctcacagtgcgaaag 478
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>gb|BT000640.1| Arabidopsis thaliana At1g26850/T2P11_4 mRNA, complete cds
          Length = 1851

 Score = 48.1 bits (24), Expect = 0.042
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                            
Query: 711  ggataagtagagaatgcctcacaccagtcatg 742
            ||||| |||||||| |||||||||||||||||
Sbjct: 1571 ggatatgtagagaaagcctcacaccagtcatg 1540
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>emb|AJ810709.1| Poa pratensis mRNA for Ankyrin protein kinase-like (apk gene)
          Length = 2703

 Score = 48.1 bits (24), Expect = 0.042
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                            
Query: 711  ggataagtagagaatgcctcacaccagtcatg 742
            |||||||||||||| || ||||||||||||||
Sbjct: 1880 ggataagtagagaaagcttcacaccagtcatg 1849
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>gb|AY037230.1| Arabidopsis thaliana At1g26850/T2P11_4 mRNA, complete cds
          Length = 2296

 Score = 48.1 bits (24), Expect = 0.042
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                            
Query: 711  ggataagtagagaatgcctcacaccagtcatg 742
            ||||| |||||||| |||||||||||||||||
Sbjct: 1867 ggatatgtagagaaagcctcacaccagtcatg 1836
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>gb|AY106619.1| Zea mays PCO092688 mRNA sequence
          Length = 560

 Score = 48.1 bits (24), Expect = 0.042
 Identities = 42/48 (87%)
 Strand = Plus / Minus

                                                           
Query: 695 aagatcatacgttcgaggataagtagagaatgcctcacaccagtcatg 742
           ||||||||| || |||||||| || |||||||  ||||||||||||||
Sbjct: 211 aagatcataggtacgaggatacgttgagaatggttcacaccagtcatg 164
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>ref|XM_474908.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 843

 Score = 46.1 bits (23), Expect = 0.17
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                  
Query: 717 gtagagaatgcctcacaccagtc 739
           |||||||||||||||||||||||
Sbjct: 563 gtagagaatgcctcacaccagtc 541
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>dbj|AK065174.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013002D01, full
            insert sequence
          Length = 2791

 Score = 46.1 bits (23), Expect = 0.17
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                   
Query: 717  gtagagaatgcctcacaccagtc 739
            |||||||||||||||||||||||
Sbjct: 2080 gtagagaatgcctcacaccagtc 2058
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>gb|AC144706.2| Danio rerio clone CH211-164M18, complete sequence
          Length = 149960

 Score = 44.1 bits (22), Expect = 0.66
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 59     agcaccaaatctgtttactaaa 80
              ||||||||||||||||||||||
Sbjct: 103585 agcaccaaatctgtttactaaa 103606
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>emb|BX248086.8| Zebrafish DNA sequence from clone CH211-277E21 in linkage group 12,
            complete sequence
          Length = 173672

 Score = 44.1 bits (22), Expect = 0.66
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 59   agcaccaaatctgtttactaaa 80
            ||||||||||||||||||||||
Sbjct: 6448 agcaccaaatctgtttactaaa 6469
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>ref|NM_201681.1| Arabidopsis thaliana unknown protein AT2G03480 transcript variant
            AT2G03480.2 mRNA, complete cds
          Length = 2411

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 39/45 (86%)
 Strand = Plus / Minus

                                                         
Query: 699  tcatacgttcgaggataagtagagaatgcctcacaccagtcatgt 743
            ||||| ||||||||||| || | |||||  |||||||||||||||
Sbjct: 1861 tcatatgttcgaggatatgtcgggaatggttcacaccagtcatgt 1817
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>ref|NM_126399.2| Arabidopsis thaliana ATP binding AT2G03480 transcript variant
            AT2G03480.1 mRNA, complete cds
          Length = 2444

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 39/45 (86%)
 Strand = Plus / Minus

                                                         
Query: 699  tcatacgttcgaggataagtagagaatgcctcacaccagtcatgt 743
            ||||| ||||||||||| || | |||||  |||||||||||||||
Sbjct: 1894 tcatatgttcgaggatatgtcgggaatggttcacaccagtcatgt 1850
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>ref|NM_111855.2| Arabidopsis thaliana unknown protein AT3G10200 mRNA, complete cds
          Length = 1951

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 39/45 (86%)
 Strand = Plus / Minus

                                                         
Query: 698  atcatacgttcgaggataagtagagaatgcctcacaccagtcatg 742
            ||||||||| || ||||| || ||||| ||||||||||| |||||
Sbjct: 1519 atcatacgtgcgtggatatgttgagaacgcctcacaccaatcatg 1475
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>emb|CR786572.20| Zebrafish DNA sequence from clone DKEY-258F14 in linkage group 8,
             complete sequence
          Length = 137717

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 24    aaaatatgtttacagtttaat 44
             |||||||||||||||||||||
Sbjct: 18810 aaaatatgtttacagtttaat 18790
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>gb|BT001040.1| Arabidopsis thaliana At2g03480/T4M8.9 mRNA, complete cds
          Length = 1185

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 39/45 (86%)
 Strand = Plus / Minus

                                                        
Query: 699 tcatacgttcgaggataagtagagaatgcctcacaccagtcatgt 743
           ||||| ||||||||||| || | |||||  |||||||||||||||
Sbjct: 896 tcatatgttcgaggatatgtcgggaatggttcacaccagtcatgt 852
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>emb|Z82201.1|HS345P10 Human DNA sequence from clone RP3-345P10 on chromosome 22, complete
             sequence
          Length = 137785

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 190   tggagacaacaaaaggagaga 210
             |||||||||||||||||||||
Sbjct: 76668 tggagacaacaaaaggagaga 76688
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>gb|AC090677.13| Homo sapiens 12 BAC RP11-637N6 (Roswell Park Cancer Institute Human
            BAC Library) complete sequence
          Length = 60429

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 129  aaaaaggtttatttcctaacc 149
            |||||||||||||||||||||
Sbjct: 3769 aaaaaggtttatttcctaacc 3789
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>gb|AC010587.6| Homo sapiens chromosome 5 clone CTC-394G3, complete sequence
          Length = 94536

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 18    tcccccaaaatatgtttacag 38
             |||||||||||||||||||||
Sbjct: 76634 tcccccaaaatatgtttacag 76614
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>gb|AC010372.6| Homo sapiens chromosome 5 clone CTD-2049O16, complete sequence
          Length = 125174

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 18    tcccccaaaatatgtttacag 38
             |||||||||||||||||||||
Sbjct: 90086 tcccccaaaatatgtttacag 90106
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>gb|AY039849.1| Arabidopsis thaliana At2g03480/T4M8.9 mRNA, complete cds
          Length = 2560

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 39/45 (86%)
 Strand = Plus / Minus

                                                         
Query: 699  tcatacgttcgaggataagtagagaatgcctcacaccagtcatgt 743
            ||||| ||||||||||| || | |||||  |||||||||||||||
Sbjct: 2011 tcatatgttcgaggatatgtcgggaatggttcacaccagtcatgt 1967
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>gb|BT005741.1| Arabidopsis thaliana clone RAFL15-40-C20 (R50008) unknown protein
            (At3g10200) mRNA, complete cds
          Length = 1970

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 39/45 (86%)
 Strand = Plus / Minus

                                                         
Query: 698  atcatacgttcgaggataagtagagaatgcctcacaccagtcatg 742
            ||||||||| || ||||| || ||||| ||||||||||| |||||
Sbjct: 1519 atcatacgtgcgtggatatgttgagaacgcctcacaccaatcatg 1475
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>dbj|AK102287.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033089J21, full
            insert sequence
          Length = 2371

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 39/45 (86%)
 Strand = Plus / Minus

                                                         
Query: 695  aagatcatacgttcgaggataagtagagaatgcctcacaccagtc 739
            ||||||||||||||  || ||||||||||| || || ||||||||
Sbjct: 1829 aagatcatacgttcttgggtaagtagagaaagcttcgcaccagtc 1785
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>gb|DQ332727.1| Synthetic construct Saccharomyces cerevisiae clone FLH112735.01X
            YFL049W gene, complete sequence
          Length = 1872

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 470  tatcatttcgttctcctcaga 490
            |||||||||||||||||||||
Sbjct: 1215 tatcatttcgttctcctcaga 1195
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>dbj|AP001496.4| Homo sapiens genomic DNA, chromosome 18 clone:RP11-835E18, complete
             sequence
          Length = 179358

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                          
Query: 635   cagatcttcagcactgcaacctcttttct 663
             ||||| ||||||||||||||||| |||||
Sbjct: 57734 cagattttcagcactgcaacctcatttct 57706
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>emb|AL805968.6| Mouse DNA sequence from clone RP23-424G19 on chromosome 4, complete
             sequence
          Length = 171320

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 246   cctgagaaacattctatcttc 266
             |||||||||||||||||||||
Sbjct: 84137 cctgagaaacattctatcttc 84117
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>dbj|D50617.1|YSCCHRVIN Saccharomyces cerevisiae chromosome VI complete DNA sequence
          Length = 270148

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 470   tatcatttcgttctcctcaga 490
             |||||||||||||||||||||
Sbjct: 38017 tatcatttcgttctcctcaga 37997


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 8,139,316
Number of Sequences: 3902068
Number of extensions: 8139316
Number of successful extensions: 210899
Number of sequences better than 10.0: 52
Number of HSP's better than 10.0 without gapping: 52
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 210741
Number of HSP's gapped (non-prelim): 157
length of query: 750
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 727
effective length of database: 17,143,297,704
effective search space: 12463177430808
effective search space used: 12463177430808
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 21 (42.1 bits)
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