ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbags25j02 |
|---|---|
| Clone Library Name | barley_pub |
>CR015_HUMAN (Q96N68) Protein C18orf15| Length = 181 Score = 33.1 bits (74), Expect = 0.52 Identities = 9/30 (30%), Positives = 18/30 (60%) Frame = -3 Query: 123 LCTCWVLLLYICTCRSIMLCTCKIILMCTC 34 +C C + +++C C + +C C ++ MC C Sbjct: 129 MCACMCVCVHVCAC--VYVCMCVLVCMCAC 156
>TRMU_XYLFA (Q9PDD9) Probable tRNA| (5-methylaminomethyl-2-thiouridylate)-methyltransferase (EC 2.1.1.61) Length = 379 Score = 32.0 bits (71), Expect = 1.2 Identities = 14/46 (30%), Positives = 23/46 (50%) Frame = -1 Query: 326 NLDCLKYSTTKYTRFLHPLKR*KTSTISTGHYVQRRRQWQEWHIVQ 189 N D L K+ FL + +I+TGHY + + Q WH+++ Sbjct: 94 NPDVLCNREIKFKHFLETARELGADSIATGHYARIKHYRQRWHLLR 139
>UBP21_SCHPO (Q9UTT1) Ubiquitin carboxyl-terminal hydrolase 21 (EC 3.1.2.15)| (Ubiquitin thioesterase 21) (Ubiquitin-specific processing protease 21) (Deubiquitinating enzyme 21) Length = 1129 Score = 31.6 bits (70), Expect = 1.5 Identities = 16/43 (37%), Positives = 27/43 (62%), Gaps = 1/43 (2%) Frame = -3 Query: 372 MKVIVNQVDLSHPDAE-LRLLEVFYHKIYKIFAPTEKIENIND 247 ++ + +V L+ DA LRL EV+ H+I K PT+ I ++N+ Sbjct: 957 LRQVTQKVPLNAEDASRLRLYEVYNHRILKSHLPTDGIYDLNE 999
>ORC3_YEAST (P54790) Origin recognition complex subunit 3 (Origin recognition| complex protein 62 kDa subunit) Length = 616 Score = 30.8 bits (68), Expect = 2.6 Identities = 17/45 (37%), Positives = 26/45 (57%), Gaps = 1/45 (2%) Frame = +1 Query: 280 KNLVYFVVEYFKQSKFSIRMGQVNL-IDNDFHMTSLKTSPTMLFF 411 K L Y ++ YF Q+ FS+ + VN+ ND ++ L PT +FF Sbjct: 319 KMLDYSLMSYFFQNAFSVFIDPVNVDFLNDDYLKILSRCPTFMFF 363
>TRMU_XYLFT (Q87DM0) Probable tRNA| (5-methylaminomethyl-2-thiouridylate)-methyltransferase (EC 2.1.1.61) Length = 379 Score = 30.4 bits (67), Expect = 3.4 Identities = 14/46 (30%), Positives = 21/46 (45%) Frame = -1 Query: 326 NLDCLKYSTTKYTRFLHPLKR*KTSTISTGHYVQRRRQWQEWHIVQ 189 N D L K+ FL + I+TGHY + Q WH+++ Sbjct: 94 NPDVLCNREIKFKHFLETARELGADRIATGHYARIEHYRQRWHLLR 139
>YCF44_CYACA (O19913) Hypothetical 45.3 kDa protein ycf44| Length = 396 Score = 30.4 bits (67), Expect = 3.4 Identities = 24/83 (28%), Positives = 41/83 (49%), Gaps = 3/83 (3%) Frame = -3 Query: 366 VIVNQVDLSHPDAELRLLEVFY--HKIYKIFAPTEKIENINDQYWTLRAEEASMARVAYC 193 ++ QV + D +L + V Y +KIY+ P +KIE N+Q W+ C Sbjct: 261 LVYKQVYIFQMDWKLFGIRVNYGKNKIYEF--PVQKIEANNEQQWS-------------C 305 Query: 192 TV-EEDEKKLVLLIQTFSISLYV 127 T+ +++ KL+L+ + S YV Sbjct: 306 TIPAKNQSKLILIFKNMSDEFYV 328
>JNK1_CAEEL (Q8WQG9) Stress-activated protein kinase jnk-1 (EC 2.7.11.24)| Length = 463 Score = 30.4 bits (67), Expect = 3.4 Identities = 15/60 (25%), Positives = 30/60 (50%), Gaps = 4/60 (6%) Frame = -3 Query: 327 ELRLLEVFYHK----IYKIFAPTEKIENINDQYWTLRAEEASMARVAYCTVEEDEKKLVL 160 EL+L+ + HK I F P +K++ ND Y + +A++ +V ++ + +L Sbjct: 166 ELKLMSLVNHKNIIGILNCFTPQKKLDEFNDLYIVMELMDANLCQVIQMDLDHERLSYLL 225
>DIP2C_HUMAN (Q9Y2E4) Disco-interacting protein 2 homolog C| Length = 1556 Score = 30.4 bits (67), Expect = 3.4 Identities = 22/82 (26%), Positives = 38/82 (46%), Gaps = 4/82 (4%) Frame = -3 Query: 375 HMKVIVNQVDLSHPDAELRLLEVFYHKIYKIFAPTEKIE----NINDQYWTLRAEEASMA 208 H +++ +L A L LL V +K+ F +E + Q +L+A ++ Sbjct: 1200 HQSILIPPSELETNPA-LWLLAVSQYKVRDTFCSYSVMELCTKGLGSQTESLKARGLDLS 1258 Query: 207 RVAYCTVEEDEKKLVLLIQTFS 142 RV C V +E+ + L Q+FS Sbjct: 1259 RVRTCVVVAEERPRIALTQSFS 1280
>MK14B_BRARE (Q9DGE1) Mitogen-activated protein kinase 14b (EC 2.7.11.24)| (Mitogen-activated protein kinase p38b) (MAP kinase p38b) (zp38b) Length = 348 Score = 30.0 bits (66), Expect = 4.4 Identities = 18/71 (25%), Positives = 29/71 (40%), Gaps = 4/71 (5%) Frame = -3 Query: 327 ELRLLEVFYHK----IYKIFAPTEKIENINDQYWTLRAEEASMARVAYCTVEEDEKKLVL 160 ELRLL+ H+ + +F+P +E ND Y A + + C D+ L Sbjct: 72 ELRLLKHMKHENVIGLLDVFSPATSLEGFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 131 Query: 159 LIQTFSISLYV 127 + Q Y+ Sbjct: 132 IYQILRALKYI 142
>Q300_MOUSE (Q02722) Protein Q300| Length = 77 Score = 29.6 bits (65), Expect = 5.8 Identities = 9/23 (39%), Positives = 12/23 (52%) Frame = -3 Query: 102 LLYICTCRSIMLCTCKIILMCTC 34 L Y+C C + +C C L C C Sbjct: 24 LFYVCVCVCVCVCVCVCTLTCMC 46
>SEPT3_MOUSE (Q9Z1S5) Neuronal-specific septin-3| Length = 465 Score = 29.3 bits (64), Expect = 7.6 Identities = 9/34 (26%), Positives = 17/34 (50%) Frame = -3 Query: 141 ISLYV*LCTCWVLLLYICTCRSIMLCTCKIILMC 40 + +YV +C +Y+C S +C C + +C Sbjct: 380 VCMYVCMCVMESACVYVCVMESACVCVCMCVYVC 413
>YNH9_SCHPO (Q96WW0) Hypothetical WD-repeat protein C32H8.09 in chromosome II| Length = 483 Score = 29.3 bits (64), Expect = 7.6 Identities = 14/47 (29%), Positives = 22/47 (46%) Frame = +3 Query: 393 TNHAIFWQSYTVNKHHVKHI*GYWTNSIYYKALWGPLLXNTRCH*LC 533 + H + S T+ HHV + + + Y LW P L +CH +C Sbjct: 30 SGHVLIRNSETLELHHVFLLNAQFIQKVVY-LLWKPNLGAEKCHQIC 75
>CAC1I_HUMAN (Q9P0X4) Voltage-dependent T-type calcium channel alpha-1I subunit| (Voltage-gated calcium channel alpha subunit Cav3.3) (Ca(v)3.3) Length = 2223 Score = 28.9 bits (63), Expect = 9.9 Identities = 19/63 (30%), Positives = 32/63 (50%), Gaps = 1/63 (1%) Frame = +1 Query: 133 KRDRESLNEKHKFLLILFHCTICHSCH*RLLC-T*CPVLIVDVFYLFSGCKNLVYFVVEY 309 KR R ++ K + ++ T CH+ RLL + C +D+F F C N+V +E+ Sbjct: 1452 KRLRRLEKKRRKAQRLPYYATYCHT---RLLIHSMCTSHYLDIFITFIICLNVVTMSLEH 1508 Query: 310 FKQ 318 + Q Sbjct: 1509 YNQ 1511
>ERA_BACHD (Q9KD52) GTP-binding protein era homolog| Length = 304 Score = 28.9 bits (63), Expect = 9.9 Identities = 10/24 (41%), Positives = 17/24 (70%) Frame = -3 Query: 366 VIVNQVDLSHPDAELRLLEVFYHK 295 +++N++D HPD L L+E + HK Sbjct: 123 LVINKIDKVHPDDLLSLIETYRHK 146
>MK14_RAT (P70618) Mitogen-activated protein kinase 14 (EC 2.7.11.24)| (Mitogen-activated protein kinase p38 alpha) (MAP kinase p38 alpha) (CRK1) Length = 359 Score = 28.9 bits (63), Expect = 9.9 Identities = 17/63 (26%), Positives = 26/63 (41%), Gaps = 4/63 (6%) Frame = -3 Query: 327 ELRLLEVFYHK----IYKIFAPTEKIENINDQYWTLRAEEASMARVAYCTVEEDEKKLVL 160 ELRLL+ H+ + +F P +E ND Y A + + C D+ L Sbjct: 70 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 129 Query: 159 LIQ 151 + Q Sbjct: 130 IYQ 132
>MK14_PANTR (Q95NE7) Mitogen-activated protein kinase 14 (EC 2.7.11.24)| (Mitogen-activated protein kinase p38 alpha) (MAP kinase p38 alpha) (Stress-activated protein kinase 2a) Length = 359 Score = 28.9 bits (63), Expect = 9.9 Identities = 17/63 (26%), Positives = 26/63 (41%), Gaps = 4/63 (6%) Frame = -3 Query: 327 ELRLLEVFYHK----IYKIFAPTEKIENINDQYWTLRAEEASMARVAYCTVEEDEKKLVL 160 ELRLL+ H+ + +F P +E ND Y A + + C D+ L Sbjct: 70 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 129 Query: 159 LIQ 151 + Q Sbjct: 130 IYQ 132
>MK14_MOUSE (P47811) Mitogen-activated protein kinase 14 (EC 2.7.11.24)| (Mitogen-activated protein kinase p38 alpha) (MAP kinase p38 alpha) (CRK1) Length = 359 Score = 28.9 bits (63), Expect = 9.9 Identities = 17/63 (26%), Positives = 26/63 (41%), Gaps = 4/63 (6%) Frame = -3 Query: 327 ELRLLEVFYHK----IYKIFAPTEKIENINDQYWTLRAEEASMARVAYCTVEEDEKKLVL 160 ELRLL+ H+ + +F P +E ND Y A + + C D+ L Sbjct: 70 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 129 Query: 159 LIQ 151 + Q Sbjct: 130 IYQ 132
>MK14_HUMAN (Q16539) Mitogen-activated protein kinase 14 (EC 2.7.11.24)| (Mitogen-activated protein kinase p38 alpha) (MAP kinase p38 alpha) (Cytokine suppressive anti-inflammatory drug-binding protein) (CSAID-binding protein) (CSBP) (MAX-interacting prote Length = 359 Score = 28.9 bits (63), Expect = 9.9 Identities = 17/63 (26%), Positives = 26/63 (41%), Gaps = 4/63 (6%) Frame = -3 Query: 327 ELRLLEVFYHK----IYKIFAPTEKIENINDQYWTLRAEEASMARVAYCTVEEDEKKLVL 160 ELRLL+ H+ + +F P +E ND Y A + + C D+ L Sbjct: 70 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 129 Query: 159 LIQ 151 + Q Sbjct: 130 IYQ 132
>MK14_CANFA (O02812) Mitogen-activated protein kinase 14 (EC 2.7.11.24)| (Mitogen-activated protein kinase p38 alpha) (MAP kinase p38 alpha) Length = 359 Score = 28.9 bits (63), Expect = 9.9 Identities = 17/63 (26%), Positives = 26/63 (41%), Gaps = 4/63 (6%) Frame = -3 Query: 327 ELRLLEVFYHK----IYKIFAPTEKIENINDQYWTLRAEEASMARVAYCTVEEDEKKLVL 160 ELRLL+ H+ + +F P +E ND Y A + + C D+ L Sbjct: 70 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 129 Query: 159 LIQ 151 + Q Sbjct: 130 IYQ 132
>GAT1_YEAST (P43574) Transcriptional regulatory protein GAT1| Length = 510 Score = 28.9 bits (63), Expect = 9.9 Identities = 14/38 (36%), Positives = 20/38 (52%) Frame = +1 Query: 37 SAHQNNFTSAQHNTSASANVQKKDPTSTQSHIKRDRES 150 S+H NN S +NT+A+ N T+T S + R S Sbjct: 225 SSHNNNSPSIANNTNANTNTNTSASTNTNSPLLRRNPS 262
>MK14_XENLA (P47812) Mitogen-activated protein kinase 14 (EC 2.7.11.24)| (Mitogen-activated Mitogen-activated protein kinase 2) (MAP kinase 2) (MPK2) Length = 361 Score = 28.9 bits (63), Expect = 9.9 Identities = 17/63 (26%), Positives = 27/63 (42%), Gaps = 4/63 (6%) Frame = -3 Query: 327 ELRLLEVFYHK----IYKIFAPTEKIENINDQYWTLRAEEASMARVAYCTVEEDEKKLVL 160 ELRLL+ H+ + +F+P + E ND Y A + + C D+ L Sbjct: 72 ELRLLKHMKHENVIGLLDVFSPAKSFEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 131 Query: 159 LIQ 151 + Q Sbjct: 132 IYQ 134 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 75,269,704 Number of Sequences: 219361 Number of extensions: 1433405 Number of successful extensions: 3774 Number of sequences better than 10.0: 21 Number of HSP's better than 10.0 without gapping: 3664 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3767 length of database: 80,573,946 effective HSP length: 105 effective length of database: 57,541,041 effective search space used: 4373119116 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
