ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbags25i22 |
|---|---|
| Clone Library Name | barley_pub |
>CFDP1_CHICK (Q75QI0) Craniofacial development protein 1 (Bucentaur)| Length = 290 Score = 85.5 bits (210), Expect = 8e-17 Identities = 50/132 (37%), Positives = 79/132 (59%), Gaps = 17/132 (12%) Frame = -2 Query: 480 GKVEITEVRDFAGKDIEIKKLVDADSKEAVE--------KASAVGAAP--------SAVD 349 G+V IT+V DFAG+++ + K VD+ SKEA ++SA G+ P S + Sbjct: 157 GRVTITKVFDFAGEEVRVTKEVDSSSKEAKSFLKQQEKWQSSAPGSLPTVSGVKRPSGIS 216 Query: 348 NILEQI-RKKQKLSVLDKTKKDWXXXXXXXXXXXELGAYKKSSNQYLDRQSFLKRADYRE 172 ++L +I KKQK+S L+K+K DW EL + + + Y++R++FL+R D+R+ Sbjct: 217 SLLGKIGSKKQKMSTLEKSKLDWENFKEEEGIVEELAIHNRGKDGYIERKAFLERVDHRQ 276 Query: 171 YELERDARLSLM 136 +E+ERD RLS M Sbjct: 277 FEIERDIRLSRM 288
>CFDP1_MOUSE (O88271) Craniofacial development protein 1 (Bucentaur) (27 kDa| craniofacial protein) (Protein Cp27) Length = 295 Score = 81.3 bits (199), Expect = 2e-15 Identities = 51/136 (37%), Positives = 76/136 (55%), Gaps = 22/136 (16%) Frame = -2 Query: 477 KVEITEVRDFAGKDIEIKKLVDADSKEAV--------EKASAVGAAP------------- 361 KV+IT+V DFAG+++ + K VDA SKEA EK A+ +P Sbjct: 158 KVKITKVFDFAGEEVRVTKEVDAASKEAKSFLKQTEREKPQALVTSPATPLPAGSGIKRA 217 Query: 360 SAVDNILEQI-RKKQKLSVLDKTKKDWXXXXXXXXXXXELGAYKKSSNQYLDRQSFLKRA 184 S + ++L +I KKQK+S L+K+K DW EL + + Y++R++FL R Sbjct: 218 SGMSSLLGKIGAKKQKMSTLEKSKLDWESFKEEEGIGEELAIHNRGKEGYIERKAFLDRV 277 Query: 183 DYREYELERDARLSLM 136 D+R++E+ERD RLS M Sbjct: 278 DHRQFEIERDLRLSKM 293
>CFDP1_RAT (Q75UQ2) Craniofacial development protein 1 (Bucentaur)| Length = 295 Score = 80.5 bits (197), Expect = 3e-15 Identities = 52/136 (38%), Positives = 77/136 (56%), Gaps = 22/136 (16%) Frame = -2 Query: 477 KVEITEVRDFAGKDIEIKKLVDADSKEAV--------EKASAV---GAAP---------- 361 KV+IT+V DFAG+++ + K VDA SKEA EK A+ A P Sbjct: 158 KVKITKVFDFAGEEVRVTKEVDATSKEAKSFLKQTEKEKPQALVTSAATPPPAGSGIKRT 217 Query: 360 SAVDNILEQI-RKKQKLSVLDKTKKDWXXXXXXXXXXXELGAYKKSSNQYLDRQSFLKRA 184 S + ++L +I KKQK+S L+K+K DW EL + + Y++R++FL+R Sbjct: 218 SGMSSLLGKIGAKKQKMSTLEKSKLDWESFKEEEGIGEELAIHNRGKEGYIERKAFLERV 277 Query: 183 DYREYELERDARLSLM 136 D+R++E+ERD RLS M Sbjct: 278 DHRQFEIERDLRLSKM 293
>CFDP1_CAMDR (Q4ADK7) Craniofacial development protein 1 (Bucentaur)| Length = 297 Score = 80.1 bits (196), Expect = 4e-15 Identities = 50/136 (36%), Positives = 74/136 (54%), Gaps = 22/136 (16%) Frame = -2 Query: 477 KVEITEVRDFAGKDIEIKKLVDADSKEAVE----------KASAVGAAPS---------- 358 KV+IT+V DFAG+++ + K VDA SKEA + + A PS Sbjct: 160 KVKITKVFDFAGEEVRVTKEVDATSKEAKSFFKQNEKEKPQTNVPAALPSLPAGSGLKRS 219 Query: 357 -AVDNILEQI-RKKQKLSVLDKTKKDWXXXXXXXXXXXELGAYKKSSNQYLDRQSFLKRA 184 + N+L +I KKQK+S L+K+K DW EL + + Y++R++FL R Sbjct: 220 SGMSNLLGKIGAKKQKMSTLEKSKLDWESFKEEEGIGEELAIHNRGKEGYIERKAFLDRV 279 Query: 183 DYREYELERDARLSLM 136 D+R++E+ERD RLS M Sbjct: 280 DHRQFEIERDLRLSKM 295
>CFDP1_HUMAN (Q9UEE9) Craniofacial development protein 1 (Bucentaur)| Length = 299 Score = 80.1 bits (196), Expect = 4e-15 Identities = 51/136 (37%), Positives = 74/136 (54%), Gaps = 22/136 (16%) Frame = -2 Query: 477 KVEITEVRDFAGKDIEIKKLVDADSKEAV------EKASAVGAAPSAV------------ 352 KV+IT+V DFAG+++ + K VDA SKEA EK PSA+ Sbjct: 162 KVKITKVFDFAGEEVRVTKEVDATSKEAKSFFKQNEKEKPQANVPSALPSLPAGSGLKRS 221 Query: 351 ---DNILEQI-RKKQKLSVLDKTKKDWXXXXXXXXXXXELGAYKKSSNQYLDRQSFLKRA 184 ++L +I KKQK+S L+K+K DW EL + + Y++R++FL R Sbjct: 222 SGMSSLLGKIGAKKQKMSTLEKSKLDWESFKEEEGIGEELAIHNRGKEGYIERKAFLDRV 281 Query: 183 DYREYELERDARLSLM 136 D+R++E+ERD RLS M Sbjct: 282 DHRQFEIERDLRLSKM 297
>CFDP1_TRAJA (Q60FC2) Craniofacial development protein 1 (Bucentaur) (h-type| BCNT protein) Length = 298 Score = 79.0 bits (193), Expect = 8e-15 Identities = 52/136 (38%), Positives = 76/136 (55%), Gaps = 22/136 (16%) Frame = -2 Query: 477 KVEITEVRDFAGKDIEIKKLVDADSKEAV--------EKA-----SAVGAAP-------- 361 KV+IT+V DFAG+++ + K VD SKEA EK SAV + P Sbjct: 161 KVKITKVFDFAGEEVRVTKEVDPTSKEAKSFFKQSEKEKPQPNVPSAVSSLPAGSGLKRS 220 Query: 360 SAVDNILEQI-RKKQKLSVLDKTKKDWXXXXXXXXXXXELGAYKKSSNQYLDRQSFLKRA 184 S + ++L +I KKQK+S L+K+K DW EL + + Y++R++FL R Sbjct: 221 SGMSSLLGKIGAKKQKMSTLEKSKLDWENFKEEEGIAEELAIHNRGKEGYIERKAFLDRV 280 Query: 183 DYREYELERDARLSLM 136 D+R++E+ERD RLS M Sbjct: 281 DHRQFEIERDLRLSKM 296
>CFDP1_BOVIN (Q8HXY9) Craniofacial development protein 1 (Bucentaur) (h-type| BCNT protein) Length = 297 Score = 78.6 bits (192), Expect = 1e-14 Identities = 51/136 (37%), Positives = 73/136 (53%), Gaps = 22/136 (16%) Frame = -2 Query: 477 KVEITEVRDFAGKDIEIKKLVDADSKEAV------EKASAVGAAPSAV------------ 352 KV+IT+V DFAG+++ + K VDA SKEA EK P AV Sbjct: 160 KVKITKVFDFAGEEVRVIKEVDATSKEAKSFFKQNEKEKPQSNVPPAVPSLPAGSGLKRS 219 Query: 351 ---DNILEQI-RKKQKLSVLDKTKKDWXXXXXXXXXXXELGAYKKSSNQYLDRQSFLKRA 184 ++L +I KKQK+S L+K+K DW EL + + Y++R++FL R Sbjct: 220 SGMSSLLGKIGAKKQKMSTLEKSKLDWESFKEEEGIGEELAIHNRGKEGYIERKAFLDRV 279 Query: 183 DYREYELERDARLSLM 136 D+R++E+ERD RLS M Sbjct: 280 DHRQFEIERDLRLSKM 295
>CFDP1_MUNRE (Q4ADK4) Craniofacial development protein 1 (Bucentaur)| Length = 298 Score = 76.6 bits (187), Expect = 4e-14 Identities = 48/136 (35%), Positives = 75/136 (55%), Gaps = 22/136 (16%) Frame = -2 Query: 477 KVEITEVRDFAGKDIEIKKLVDADSKEAVE----------KASAVGAAPS---------- 358 KV+IT+V DFAG+++ + K VDA SKEA +++ + PS Sbjct: 161 KVKITKVFDFAGEEVRVIKEVDATSKEAKSFFKQNEKEKPQSNISSSVPSLSAGSGLKRS 220 Query: 357 -AVDNILEQI-RKKQKLSVLDKTKKDWXXXXXXXXXXXELGAYKKSSNQYLDRQSFLKRA 184 + ++L +I KKQK+S L+K+K DW EL + + Y++R++FL R Sbjct: 221 SGMSSLLGKIGAKKQKMSTLEKSKLDWESFKEEEGIGEELAIHNRGKEGYIERKAFLDRV 280 Query: 183 DYREYELERDARLSLM 136 D+R++E+ERD RLS M Sbjct: 281 DHRQFEIERDLRLSQM 296
>SWC5_DEBHA (Q6BWZ7) SWR1-complex protein 5| Length = 341 Score = 44.7 bits (104), Expect = 2e-04 Identities = 45/147 (30%), Positives = 57/147 (38%), Gaps = 37/147 (25%) Frame = -2 Query: 477 KVEITEVRDFAGKDIEIKKLVDADSKEAVE-------------KASAVGAA--------- 364 KV+I FAGK I KLVDA S EA KASA + Sbjct: 181 KVKIESSYTFAGKVITESKLVDAGSAEAKAYFNSTKGITASNLKASAATRSFVPIIRTIP 240 Query: 363 --------------PSAVDNILEQIR-KKQKLSVLDKTKKDWXXXXXXXXXXXELGAYKK 229 PS +D L KKQKLS L+K++ DW +L + K Sbjct: 241 GSTEPTELRIKLKRPSLIDKFLSTYGDKKQKLSTLEKSRLDWASFVDQKKLKDDLSTHNK 300 Query: 228 SSNQYLDRQSFLKRADYREYELERDAR 148 YLD+Q FL R + E + A+ Sbjct: 301 GG--YLDKQEFLGRLQDKRDEHYQKAK 325
>SWC5_ASHGO (Q754T8) SWR1-complex protein 5| Length = 286 Score = 39.7 bits (91), Expect = 0.005 Identities = 37/136 (27%), Positives = 57/136 (41%), Gaps = 23/136 (16%) Frame = -2 Query: 450 FAGKDIEIKKLVDADSKEAVEKASAVGAAPSAV--------------------DNILEQI 331 FAG+ + KK+V S EA E +++ P + ILEQI Sbjct: 153 FAGEMVREKKMVLKSSAEAQEYLNSLKFKPKELVPSTMQEMDGGSKLRRPLKRPPILEQI 212 Query: 330 ---RKKQKLSVLDKTKKDWXXXXXXXXXXXELGAYKKSSNQYLDRQSFLKRADYREYELE 160 K KL+ L+K+K DW EL + K YL +Q FL++ D + E Sbjct: 213 IAGALKPKLTTLEKSKLDWATYVDKEGINEELQLFNKDG--YLAKQDFLRKVDGIQNEQY 270 Query: 159 RDARLSLMAKRKSESM 112 ++ R + K ++ M Sbjct: 271 KELRRQELQKNGAQGM 286
>SWC5_CANGA (Q6FML0) SWR1-complex protein 5| Length = 299 Score = 38.1 bits (87), Expect = 0.015 Identities = 45/164 (27%), Positives = 59/164 (35%), Gaps = 44/164 (26%) Frame = -2 Query: 489 SGRGKVEITEVRDFAGKDIEIKKLVDADSKEAVE---------KASAVGAAPSAVDNI-- 343 +G V I V FAG+ I KK V S EAVE G+ ++ I Sbjct: 133 AGEEMVTIERVYKFAGETIREKKTVPISSAEAVEYLNNLKFRKSTDQAGSTKRKLEEIDV 192 Query: 342 -----------------------------LEQIRK---KQKLSVLDKTKKDWXXXXXXXX 259 LEQI K KLS L+K+K DW Sbjct: 193 KENNNTNEDTSESGIDRKKLRRPLKRPPFLEQIISGALKPKLSTLEKSKLDWATYVDKEG 252 Query: 258 XXXELGAYKKSSNQYLDRQSFLKRAD-YREYELERDARLSLMAK 130 EL A+ K YL +Q FL + D +E E + R +M + Sbjct: 253 INDELSAHNKDG--YLAKQDFLNKVDSVKENEYKELRRKEMMIR 294
>SWC5_CANAL (Q5A8H7) SWR1-complex protein 5| Length = 338 Score = 37.0 bits (84), Expect = 0.034 Identities = 24/74 (32%), Positives = 36/74 (48%), Gaps = 2/74 (2%) Frame = -2 Query: 363 PSAVDNILE--QIRKKQKLSVLDKTKKDWXXXXXXXXXXXELGAYKKSSNQYLDRQSFLK 190 PS +D L KK KLS L+K++ DW EL + K+ YLD+Q F+ Sbjct: 254 PSLIDRFLSINGNSKKMKLSTLEKSRLDWASFVDKRNINEELKIHNKAG--YLDKQDFIN 311 Query: 189 RADYREYELERDAR 148 R + + +L A+ Sbjct: 312 RMNSKRDDLYLQAK 325
>SWC5_GIBZE (Q4I650) SWR1-complex protein 5| Length = 327 Score = 37.0 bits (84), Expect = 0.034 Identities = 20/60 (33%), Positives = 32/60 (53%) Frame = -2 Query: 321 QKLSVLDKTKKDWXXXXXXXXXXXELGAYKKSSNQYLDRQSFLKRADYREYELERDARLS 142 +KL+V+DK++ DW EL KS + Y+ R+ FL +++ E R ARL+ Sbjct: 265 KKLNVVDKSRMDWAGYVDKEGIKDELALAGKSKDSYMAREDFLAKSEAMRDEDSRRARLA 324
>SPO15_SCHPO (Q10411) Sporulation-specific protein 15| Length = 1957 Score = 32.0 bits (71), Expect = 1.1 Identities = 17/62 (27%), Positives = 34/62 (54%), Gaps = 8/62 (12%) Frame = -2 Query: 471 EITEVRDFAGKDI--------EIKKLVDADSKEAVEKASAVGAAPSAVDNILEQIRKKQK 316 EI RDF K I +++ +++ S E EK++ + ++N+ EQI++++K Sbjct: 445 EINSERDFQNKKIKDFEKIEQDLRACLNSSSNELKEKSALIDKKDQELNNLREQIKEQKK 504 Query: 315 LS 310 +S Sbjct: 505 VS 506
>VATE_CANAL (O94072) Vacuolar ATP synthase subunit E (EC 3.6.3.14) (V-ATPase E| subunit) (Vacuolar proton pump E subunit) Length = 226 Score = 30.8 bits (68), Expect = 2.5 Identities = 19/59 (32%), Positives = 34/59 (57%), Gaps = 3/59 (5%) Frame = -2 Query: 477 KVEITEVRDFAGKDIEIKKL---VDADSKEAVEKASAVGAAPSAVDNILEQIRKKQKLS 310 K E+++++ F K+ + K + AD + +EKAS V + +A+D+ EQ KK L+ Sbjct: 9 KSELSKMQAFIEKEAKEKAKEIKLKADEEYEIEKASIVRSETAAIDSTYEQKLKKASLA 67
>BGAL_SULSH (P50388) Beta-galactosidase (EC 3.2.1.23) (Lactase)| Length = 489 Score = 29.3 bits (64), Expect = 7.2 Identities = 14/42 (33%), Positives = 23/42 (54%) Frame = +1 Query: 7 FTLSQKNLYQVLQQKVKVLPA**QLSSKPLGIIVLHTLALPL 132 F LS+K +Y ++Q + +S KP+GII ++ PL Sbjct: 229 FELSRKAMYNIIQAHARAYDGIKSVSKKPIGIIYANSSFQPL 270
>RNH2_PROM9 (Q318P1) Ribonuclease HII (EC 3.1.26.4) (RNase HII)| Length = 205 Score = 29.3 bits (64), Expect = 7.2 Identities = 26/83 (31%), Positives = 38/83 (45%), Gaps = 1/83 (1%) Frame = -2 Query: 426 KKLVDADSK-EAVEKASAVGAAPSAVDNILEQIRKKQKLSVLDKTKKDWXXXXXXXXXXX 250 K +V DSK A+ AS V A A DN++E++ KK ++ K K Sbjct: 131 KNIVSGDSKITAIASASIV--AKVARDNLMERLEKKYSGYLIFKNK--------GYGTRE 180 Query: 249 ELGAYKKSSNQYLDRQSFLKRAD 181 KK+ L R+SFL ++D Sbjct: 181 HFSNIKKNGITNLHRKSFLNQSD 203
>TMCC1_MOUSE (Q69ZZ6) Transmembrane and coiled-coil domains protein 1| Length = 649 Score = 29.3 bits (64), Expect = 7.2 Identities = 13/35 (37%), Positives = 21/35 (60%) Frame = -2 Query: 417 VDADSKEAVEKASAVGAAPSAVDNILEQIRKKQKL 313 VD DS+ A + V P+A++ +L+QIR K+ Sbjct: 81 VDLDSQNACAEIDGVSTHPTALNRVLQQIRVPPKM 115
>RL12_HALSA (P05768) 50S ribosomal protein L12P ('A' type) (HL20)|
Length = 114
Score = 28.9 bits (63), Expect = 9.3
Identities = 19/45 (42%), Positives = 25/45 (55%), Gaps = 7/45 (15%)
Frame = -2
Query: 468 ITEVRDFAGKDIE-------IKKLVDADSKEAVEKASAVGAAPSA 355
IT V + AG D+E + L D D +EAVE+A+A AA A
Sbjct: 22 ITGVLEAAGVDVEESRAKALVAALEDVDIEEAVEEAAAAPAAAPA 66
>TRPG_YEAST (P00937) Anthranilate synthase component 2 (EC 4.1.3.27)| (Anthranilate synthase component II) [Includes: Glutamine amidotransferase; Indole-3-glycerol phosphate synthase (EC 4.1.1.48) (PRAI)] Length = 484 Score = 28.9 bits (63), Expect = 9.3 Identities = 12/32 (37%), Positives = 22/32 (68%) Frame = -2 Query: 441 KDIEIKKLVDADSKEAVEKASAVGAAPSAVDN 346 KD+ ++ LV+ +SKE +++A +GA V+N Sbjct: 383 KDLNMEPLVEVNSKEELQRALEIGAKVVGVNN 414
>ATG1_ASHGO (Q75CH3) Serine/threonine-protein kinase ATG1 (EC 2.7.11.1)| (Autophagy-related protein 1) Length = 972 Score = 28.9 bits (63), Expect = 9.3 Identities = 17/64 (26%), Positives = 32/64 (50%), Gaps = 2/64 (3%) Frame = -2 Query: 486 GRGKVEITEVRDF--AGKDIEIKKLVDADSKEAVEKASAVGAAPSAVDNILEQIRKKQKL 313 GRG++ + R + + K++ D DSK +V +AP+ D+ ++++K K Sbjct: 455 GRGQIPCEQNRQALQSHSHVAAKQIPDKDSKSSVSCQKHAASAPTKNDHRTTRLKEKTKC 514 Query: 312 SVLD 301 S D Sbjct: 515 SYSD 518
>HOR9_HORVU (P17992) C-hordein (Clone PC-919) (Fragment)| Length = 68 Score = 28.9 bits (63), Expect = 9.3 Identities = 11/21 (52%), Positives = 13/21 (61%) Frame = +3 Query: 351 PQQTVQHPLHWPSQPLPLNPH 413 PQ Q P +P QP+PL PH Sbjct: 36 PQPYPQQPQPFPQQPIPLQPH 56 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 57,090,091 Number of Sequences: 219361 Number of extensions: 903291 Number of successful extensions: 2892 Number of sequences better than 10.0: 22 Number of HSP's better than 10.0 without gapping: 2820 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2879 length of database: 80,573,946 effective HSP length: 105 effective length of database: 57,541,041 effective search space used: 4142954952 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)