ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags25i21
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|BT009598.1| Triticum aestivum clone wre1n.pk0075.b10:fis, ful... 640 e-180
2gb|BT009207.1| Triticum aestivum clone wle1n.pk0039.d2:fis, full... 640 e-180
3ref|XM_481579.1| Oryza sativa (japonica cultivar-group), mRNA 339 6e-90
4gb|BT017525.1| Zea mays clone EL01N0421D11.c mRNA sequence 266 7e-68
5gb|AY104276.1| Zea mays PCO062681 mRNA sequence 266 7e-68
6gb|BT009177.1| Triticum aestivum clone wl1n.pk0112.b3:fis, full ... 159 1e-35
7ref|XM_450323.1| Oryza sativa (japonica cultivar-group), mRNA 125 2e-25
8dbj|AK071383.1| Oryza sativa (japonica cultivar-group) cDNA clon... 125 2e-25
9ref|XM_450324.1| Oryza sativa (japonica cultivar-group), mRNA 111 2e-21
10dbj|AK059358.1| Oryza sativa (japonica cultivar-group) cDNA clon... 111 2e-21
11dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 96 1e-16
12dbj|AP004554.3| Oryza sativa (japonica cultivar-group) genomic D... 96 1e-16
13dbj|AP005485.3| Oryza sativa (japonica cultivar-group) genomic D... 96 1e-16
14dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 58 3e-05
15dbj|AP005738.3| Oryza sativa (japonica cultivar-group) genomic D... 58 3e-05
16ref|NM_124197.2| Arabidopsis thaliana indole-3-glycerol-phosphat... 52 0.002
17gb|AY060498.1| Arabidopsis thaliana AT5g48220/MIF21_11 mRNA, com... 52 0.002
18gb|AY052223.1| Arabidopsis thaliana AT5g48220/MIF21_11 mRNA, com... 52 0.002
19gb|AY050327.1| Arabidopsis thaliana AT5g48220/MIF21_11 mRNA, com... 52 0.002
20emb|BX833681.1|CNS0A1R5 Arabidopsis thaliana Full-length cDNA Co... 52 0.002
21emb|BX830453.1|CNS0A060 Arabidopsis thaliana Full-length cDNA Co... 52 0.002
22emb|BX832169.1|CNS09ZME Arabidopsis thaliana Full-length cDNA Co... 52 0.002
23ref|XM_472804.1| Oryza sativa (japonica cultivar-group), predic... 48 0.029
24gb|BT017430.1| Zea mays clone EL01N0403D03.c mRNA sequence 48 0.029
25emb|CR938710.1| Medicago truncatula chromosome 5 clone mth2-170k... 48 0.029
26dbj|AK101835.1| Oryza sativa (japonica cultivar-group) cDNA clon... 48 0.029
27gb|AY110654.1| Zea mays CL6_1 mRNA sequence 48 0.029
28emb|AL607024.17| Mouse DNA sequence from clone RP23-194P5 on chr... 44 0.46
29dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.46
30dbj|AP004361.4| Oryza sativa (japonica cultivar-group) genomic D... 44 0.46
31dbj|AP004233.3| Oryza sativa (japonica cultivar-group) genomic D... 44 0.46
32dbj|AK110526.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.46
33gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 42 1.8
34gb|AC122838.3| Mus musculus BAC clone RP23-191E1 from 3, complet... 42 1.8
35gb|AC139172.2| Oryza sativa chromosome 3 BAC OSJNBb0042K11 genom... 42 1.8
36gb|AC116677.11| Mus musculus chromosome 3, clone RP23-111M12, co... 42 1.8
37dbj|AK055090.1| Homo sapiens cDNA FLJ30528 fis, clone BRAWH2001037 42 1.8
38gb|AC092182.9| Homo sapiens 12p BAC RP11-174D5 (Roswell Park Can... 42 1.8
39gb|AC018683.4|AC018683 Homo sapiens BAC clone RP11-423P14 from 4... 42 1.8
40dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.8
41gb|AC155657.8| Mus musculus 6 BAC RP24-113L15 (Roswell Park Canc... 42 1.8
42gb|AC013402.9| Homo sapiens BAC clone RP11-134N15 from 2, comple... 42 1.8
43dbj|AB023039.1| Arabidopsis thaliana genomic DNA, chromosome 5, ... 42 1.8
44emb|AL929445.8| Mouse DNA sequence from clone RP23-185M22 on chr... 42 1.8
45gb|AC132592.3| Mus musculus BAC clone RP24-303I6 from 3, complet... 42 1.8
46gb|AC132453.3| Mus musculus BAC clone RP23-200J18 from 6, comple... 42 1.8
47ref|XM_514712.1| PREDICTED: Pan troglodytes LOC458321 (LOC458321... 40 7.1
48gb|AE006428.1| Lactococcus lactis subsp. lactis IL1403 section 1... 40 7.1
49gb|DQ158856.1| Bigelowiella natans nucleomorph chromosome 1, par... 40 7.1
50gb|AC091302.5| Oryza sativa chromosome 3 BAC OSJNBb0015I21 genom... 40 7.1
51emb|AJ011653.1|LLA011653 Lactococcus lactis (strain MG1363) gala... 40 7.1
52gb|BC014041.2| Homo sapiens zinc finger, NFX1-type containing 1,... 40 7.1
53emb|AL049766.14|HSDJ686N3 Human DNA sequence from clone RP4-686N... 40 7.1
54emb|AL592102.1|LISINP100 Listeria innocua plasmid pLI100, comple... 40 7.1
55gb|BC030789.1| Homo sapiens cDNA clone IMAGE:5265582, containing... 40 7.1
56dbj|AK096594.1| Homo sapiens cDNA FLJ39275 fis, clone OCBBF2010830 40 7.1
57dbj|AK002139.1| Homo sapiens cDNA FLJ11277 fis, clone PLACE1009404 40 7.1
58dbj|AK022641.1| Homo sapiens cDNA FLJ12579 fis, clone NT2RM40010... 40 7.1
59ref|NM_021035.1| Homo sapiens zinc finger, NFX1-type containing ... 40 7.1
60emb|AL929393.8| Mouse DNA sequence from clone RP23-94P7 on chrom... 40 7.1
61emb|BX511233.10| Zebrafish DNA sequence from clone CH211-152P11 ... 40 7.1
62gb|AC084319.5|AC084319 Oryza sativa chromosome 3 BAC OSJNBa0004B... 40 7.1
63dbj|AP006842.1| Bacteroides fragilis YCH46 plasmid pBFY46 DNA, c... 40 7.1
64gb|U60828.1|LLU60828 Lactococcus lactis galactose-lactose operon... 40 7.1
65gb|AF082008.1|AF082008 Lactococcus lactis NCDO2054 gal-lac opero... 40 7.1
66dbj|AB037825.1| Homo sapiens mRNA for KIAA1404 protein, partial cds 40 7.1 
>gb|BT009598.1| Triticum aestivum clone wre1n.pk0075.b10:fis, full insert mRNA
           sequence
          Length = 1005

 Score =  640 bits (323), Expect = e-180
 Identities = 416/447 (93%)
 Strand = Plus / Minus

                                                                       
Query: 66  atgcggtggtctcgcaactactactactagtctaccacaaacaagtctgatctagttgtt 125
           |||||||||||| ||| |||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 870 atgcggtggtctggcagctactactactagtctaccacaaacaagtctggtctagttgtt 811

                                                                       
Query: 126 tcagtgcaccagttctttcccgaagagtccggcgatggcgagccctgggtctgcttgctt 185
           |||||||||||||||| | |||||||| || ||||||||  |||| ||||| ||||||||
Sbjct: 810 tcagtgcaccagttctcttccgaagagcccagcgatggctcgcccagggtccgcttgctt 751

                                                                       
Query: 186 caccaaggattctcctaccaagacagcagaaactccggcattctgcacataagcaacatc 245
           |||||||||||| |||||||| ||||| || ||||| |||||||||||||||||||||||
Sbjct: 750 caccaaggattcgcctaccaaaacagcggagactccagcattctgcacataagcaacatc 691

                                                                       
Query: 246 atctgggttgaatagcccagattcaccgacaaccaatattcctttctccctgatggcatc 305
           ||||||| |||||||||| ||||| || |||||||||||||| |||||||||||||||| 
Sbjct: 690 atctggggtgaatagccctgattctccaacaaccaatattcccttctccctgatggcatt 631

                                                                       
Query: 306 gccatgcttctccagcaacgtcttcgtgttcgaagtatccactataaatgtctcaaggct 365
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 630 gccatgcttctccagcaacgtcttcgtgttcgaagtatccactataaatgtctcaagact 571

                                                                       
Query: 366 acggttgttgatgccaataagctgaacaccatttattgcgaggacacgctccatctctct 425
           |||||||||||||||||||||||||||||||||||| || |||| |||||||||||||||
Sbjct: 570 acggttgttgatgccaataagctgaacaccatttatcgcaaggatacgctccatctctct 511

                                                                       
Query: 426 ttcatcatgaacctcaataagagctgtcaatcccaactccttgcatatccgtagaaagta 485
           |||||||||||||||||||||||| ||||||||||||||||||||||| || || |||||
Sbjct: 510 ttcatcatgaacctcaataagagccgtcaatcccaactccttgcatattcgaaggaagta 451

                                      
Query: 486 ttttatgtcaagatcagttagcacagc 512
           ||||||||| |||||||||||||||||
Sbjct: 450 ttttatgtcgagatcagttagcacagc 424



 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 6   atatgtttatttcccgcataa 26
           |||||||||||||||||||||
Sbjct: 946 atatgtttatttcccgcataa 926
to top
>gb|BT009207.1| Triticum aestivum clone wle1n.pk0039.d2:fis, full insert mRNA
           sequence
          Length = 926

 Score =  640 bits (323), Expect = e-180
 Identities = 416/447 (93%)
 Strand = Plus / Minus

                                                                       
Query: 66  atgcggtggtctcgcaactactactactagtctaccacaaacaagtctgatctagttgtt 125
           |||||||||||| ||| |||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 550 atgcggtggtctggcagctactactactagtctaccacaaacaagtctggtctagttgtt 491

                                                                       
Query: 126 tcagtgcaccagttctttcccgaagagtccggcgatggcgagccctgggtctgcttgctt 185
           |||||||||||||||| | |||||||| || ||||||||  |||| ||||| ||||||||
Sbjct: 490 tcagtgcaccagttctcttccgaagagcccagcgatggctcgcccagggtccgcttgctt 431

                                                                       
Query: 186 caccaaggattctcctaccaagacagcagaaactccggcattctgcacataagcaacatc 245
           |||||||||||| |||||||| ||||| || ||||| |||||||||||||||||||||||
Sbjct: 430 caccaaggattcgcctaccaaaacagcggagactccagcattctgcacataagcaacatc 371

                                                                       
Query: 246 atctgggttgaatagcccagattcaccgacaaccaatattcctttctccctgatggcatc 305
           ||||||| |||||||||| ||||| || |||||||||||||| |||||||||||||||| 
Sbjct: 370 atctggggtgaatagccctgattctccaacaaccaatattcccttctccctgatggcatt 311

                                                                       
Query: 306 gccatgcttctccagcaacgtcttcgtgttcgaagtatccactataaatgtctcaaggct 365
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 310 gccatgcttctccagcaacgtcttcgtgttcgaagtatccactataaatgtctcaagact 251

                                                                       
Query: 366 acggttgttgatgccaataagctgaacaccatttattgcgaggacacgctccatctctct 425
           |||||||||||||||||||||||||||||||||||| || |||| |||||||||||||||
Sbjct: 250 acggttgttgatgccaataagctgaacaccatttatcgcaaggatacgctccatctctct 191

                                                                       
Query: 426 ttcatcatgaacctcaataagagctgtcaatcccaactccttgcatatccgtagaaagta 485
           |||||||||||||||||||||||| ||||||||||||||||||||||| || || |||||
Sbjct: 190 ttcatcatgaacctcaataagagccgtcaatcccaactccttgcatattcgaaggaagta 131

                                      
Query: 486 ttttatgtcaagatcagttagcacagc 512
           ||||||||| |||||||||||||||||
Sbjct: 130 ttttatgtcgagatcagttagcacagc 104



 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 6   atatgtttatttcccgcataa 26
           |||||||||||||||||||||
Sbjct: 626 atatgtttatttcccgcataa 606
to top
>ref|XM_481579.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1200

 Score =  339 bits (171), Expect = 6e-90
 Identities = 327/379 (86%)
 Strand = Plus / Minus

                                                                        
Query: 136  agttctttcccgaagagtccggcgatggcgagccctgggtctgcttgcttcaccaaggat 195
            ||||||||||||||||| || || |||||  | || |||||  ||||||| |||| ||||
Sbjct: 1190 agttctttcccgaagagcccagcaatggctcgtccagggtcgtcttgcttgaccagggat 1131

                                                                        
Query: 196  tctcctaccaagacagcagaaactccggcattctgcacataagcaacatcatctgggttg 255
            ||||| ||||| ||||| |||||||| ||||| |||||||||||||| ||||||||||||
Sbjct: 1130 tctcccaccaaaacagcggaaactccagcattttgcacataagcaacgtcatctgggttg 1071

                                                                        
Query: 256  aatagcccagattcaccgacaaccaatattcctttctccctgatggcatcgccatgcttc 315
            || ||||| ||||| || |||||||||||||| ||||||||||||| ||| |||||| | 
Sbjct: 1070 aacagccctgattcgccaacaaccaatattcccttctccctgatggtatcaccatgcata 1011

                                                                        
Query: 316  tccagcaacgtcttcgtgttcgaagtatccactataaatgtctcaaggctacggttgttg 375
            || |||||| |||| ||||| |||||||| || | |||||| |||||||| ||||| |||
Sbjct: 1010 tctagcaacatctttgtgtttgaagtatcgacaacaaatgtttcaaggctgcggttattg 951

                                                                        
Query: 376  atgccaataagctgaacaccatttattgcgaggacacgctccatctctctttcatcatga 435
            ||||||||||||||||| ||| ||||    || |||||||||||||| ||||||||||||
Sbjct: 950  atgccaataagctgaactccacttatattcagcacacgctccatctccctttcatcatga 891

                                                                        
Query: 436  acctcaataagagctgtcaatcccaactccttgcatatccgtagaaagtattttatgtca 495
            ||||||||||||||||||| |||||||||||| ||||| || || ||||| |||||||| 
Sbjct: 890  acctcaataagagctgtcattcccaactccttacatatgcgaaggaagtactttatgtcg 831

                               
Query: 496  agatcagttagcacagcgg 514
            ||||||| |||||||||||
Sbjct: 830  agatcaggtagcacagcgg 812
to top
>gb|BT017525.1| Zea mays clone EL01N0421D11.c mRNA sequence
          Length = 1390

 Score =  266 bits (134), Expect = 7e-68
 Identities = 284/334 (85%)
 Strand = Plus / Minus

                                                                        
Query: 179  cttgcttcaccaaggattctcctaccaagacagcagaaactccggcattctgcacataag 238
            |||||||||||| |||||| || ||||| ||||||||||| || |||||||| |||||||
Sbjct: 1164 cttgcttcaccagggattccccaaccaaaacagcagaaacgccagcattctgaacataag 1105

                                                                        
Query: 239  caacatcatctgggttgaatagcccagattcaccgacaaccaatattcctttctccctga 298
            |||||||||| ||  | || || || |||||||| |||||||| ||||| ||||||||||
Sbjct: 1104 caacatcatccggagtaaacagacctgattcaccaacaaccaaaattcccttctccctga 1045

                                                                        
Query: 299  tggcatcgccatgcttctccagcaacgtcttcgtgttcgaagtatccactataaatgtct 358
            ||  ||| ||||| ||||| |||||| |||| |||||||||||||| || | ||||||||
Sbjct: 1044 tgatatccccatgtttctcgagcaacatcttggtgttcgaagtatcaacaacaaatgtct 985

                                                                        
Query: 359  caaggctacggttgttgatgccaataagctgaacaccatttattgcgaggacacgctcca 418
            ||||||| ||||| ||||| |||||||||| ||| ||||||||    || ||||| ||||
Sbjct: 984  caaggcttcggttattgataccaataagcttaactccatttatcttcagcacacgttcca 925

                                                                        
Query: 419  tctctctttcatcatgaacctcaataagagctgtcaatcccaactccttgcatatccgta 478
            |||||||||||||||||||||||||||||||||||| ||||||||| | ||| ||| | |
Sbjct: 924  tctctctttcatcatgaacctcaataagagctgtcattcccaactcttcgcaaatctgaa 865

                                              
Query: 479  gaaagtattttatgtcaagatcagttagcacagc 512
            |||| |   ||||||||||||| | |||||||||
Sbjct: 864  gaaatttccttatgtcaagatctggtagcacagc 831
to top
>gb|AY104276.1| Zea mays PCO062681 mRNA sequence
          Length = 1465

 Score =  266 bits (134), Expect = 7e-68
 Identities = 284/334 (85%)
 Strand = Plus / Minus

                                                                        
Query: 179  cttgcttcaccaaggattctcctaccaagacagcagaaactccggcattctgcacataag 238
            |||||||||||| |||||| || ||||| ||||||||||| || |||||||| |||||||
Sbjct: 1190 cttgcttcaccagggattccccaaccaaaacagcagaaacgccagcattctgaacataag 1131

                                                                        
Query: 239  caacatcatctgggttgaatagcccagattcaccgacaaccaatattcctttctccctga 298
            |||||||||| ||  | || || || |||||||| |||||||| ||||| ||||||||||
Sbjct: 1130 caacatcatccggagtaaacagacctgattcaccaacaaccaaaattcccttctccctga 1071

                                                                        
Query: 299  tggcatcgccatgcttctccagcaacgtcttcgtgttcgaagtatccactataaatgtct 358
            ||  ||| ||||| ||||| |||||| |||| |||||||||||||| || | ||||||||
Sbjct: 1070 tgatatccccatgtttctcgagcaacatcttggtgttcgaagtatcaacaacaaatgtct 1011

                                                                        
Query: 359  caaggctacggttgttgatgccaataagctgaacaccatttattgcgaggacacgctcca 418
            ||||||| ||||| ||||| |||||||||| ||| ||||||||    || ||||| ||||
Sbjct: 1010 caaggcttcggttattgataccaataagcttaactccatttatcttcagcacacgttcca 951

                                                                        
Query: 419  tctctctttcatcatgaacctcaataagagctgtcaatcccaactccttgcatatccgta 478
            |||||||||||||||||||||||||||||||||||| ||||||||| | ||| ||| | |
Sbjct: 950  tctctctttcatcatgaacctcaataagagctgtcattcccaactcttcgcaaatctgaa 891

                                              
Query: 479  gaaagtattttatgtcaagatcagttagcacagc 512
            |||| |   ||||||||||||| | |||||||||
Sbjct: 890  gaaatttccttatgtcaagatctggtagcacagc 857
to top
>gb|BT009177.1| Triticum aestivum clone wl1n.pk0112.b3:fis, full insert mRNA
           sequence
          Length = 475

 Score =  159 bits (80), Expect = 1e-35
 Identities = 164/192 (85%)
 Strand = Plus / Minus

                                                                       
Query: 321 caacgtcttcgtgttcgaagtatccactataaatgtctcaaggctacggttgttgatgcc 380
           |||| |||| |||||||||||||| || | ||||||||||||||| ||||| ||||| ||
Sbjct: 475 caacatcttggtgttcgaagtatcaacaacaaatgtctcaaggcttcggttattgatacc 416

                                                                       
Query: 381 aataagctgaacaccatttattgcgaggacacgctccatctctctttcatcatgaacctc 440
           |||||||| ||| ||||||||    || ||||| ||||||||||||||||||||||||||
Sbjct: 415 aataagcttaactccatttatcttcagcacacgttccatctctctttcatcatgaacctc 356

                                                                       
Query: 441 aataagagctgtcaatcccaactccttgcatatccgtagaaagtattttatgtcaagatc 500
           |||||||||||||| ||||||||| | ||| ||| | ||||| |   |||||||||||||
Sbjct: 355 aataagagctgtcattcccaactcttcgcaaatctgaagaaatttccttatgtcaagatc 296

                       
Query: 501 agttagcacagc 512
            | |||||||||
Sbjct: 295 tggtagcacagc 284
to top
>ref|XM_450323.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1419

 Score =  125 bits (63), Expect = 2e-25
 Identities = 219/271 (80%)
 Strand = Plus / Minus

                                                                        
Query: 184  ttcaccaaggattctcctaccaagacagcagaaactccggcattctgcacataagcaaca 243
            ||||||| ||| ||||||||||| |  |||||||| || ||||||||||| || ||||||
Sbjct: 1141 ttcaccagggactctcctaccaaaattgcagaaacaccagcattctgcacgtatgcaaca 1082

                                                                        
Query: 244  tcatctgggttgaatagcccagattcaccgacaaccaatattcctttctccctgatggca 303
            ||||| ||  |||| || ||||||||||| |||||||  || ||||| ||||| |||   
Sbjct: 1081 tcatcaggcgtgaaaagaccagattcaccaacaaccagaatccctttatcccttatgagg 1022

                                                                        
Query: 304  tcgccatgcttctccagcaacgtcttcgtgttcgaagtatccactataaatgtctcaagg 363
            || ||| | ||||||| ||  ||||| ||||| |||||||| ||  |||| ||||| |  
Sbjct: 1021 tcaccacgtttctccaacagggtctttgtgtttgaagtatcaaccttaaacgtctctaaa 962

                                                                        
Query: 364  ctacggttgttgatgccaataagctgaacaccatttattgcgaggacacgctccatctct 423
            || ||||| |||||||| ||||||||||| |||| ||||  ||| ||||| |||| ||| 
Sbjct: 961  cttcggttattgatgccgataagctgaacgccatctattttgagcacacgatccagctcc 902

                                           
Query: 424  ctttcatcatgaacctcaataagagctgtca 454
            || |||||||||||||| || ||||||||||
Sbjct: 901  ctctcatcatgaacctctatgagagctgtca 871
to top
>dbj|AK071383.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023092E01, full
            insert sequence
          Length = 1420

 Score =  125 bits (63), Expect = 2e-25
 Identities = 219/271 (80%)
 Strand = Plus / Minus

                                                                        
Query: 184  ttcaccaaggattctcctaccaagacagcagaaactccggcattctgcacataagcaaca 243
            ||||||| ||| ||||||||||| |  |||||||| || ||||||||||| || ||||||
Sbjct: 1141 ttcaccagggactctcctaccaaaattgcagaaacaccagcattctgcacgtatgcaaca 1082

                                                                        
Query: 244  tcatctgggttgaatagcccagattcaccgacaaccaatattcctttctccctgatggca 303
            ||||| ||  |||| || ||||||||||| |||||||  || ||||| ||||| |||   
Sbjct: 1081 tcatcaggcgtgaaaagaccagattcaccaacaaccagaatccctttatcccttatgagg 1022

                                                                        
Query: 304  tcgccatgcttctccagcaacgtcttcgtgttcgaagtatccactataaatgtctcaagg 363
            || ||| | ||||||| ||  ||||| ||||| |||||||| ||  |||| ||||| |  
Sbjct: 1021 tcaccacgtttctccaacagggtctttgtgtttgaagtatcaaccttaaacgtctctaaa 962

                                                                        
Query: 364  ctacggttgttgatgccaataagctgaacaccatttattgcgaggacacgctccatctct 423
            || ||||| |||||||| ||||||||||| |||| ||||  ||| ||||| |||| ||| 
Sbjct: 961  cttcggttattgatgccgataagctgaacgccatctattttgagcacacgatccagctcc 902

                                           
Query: 424  ctttcatcatgaacctcaataagagctgtca 454
            || |||||||||||||| || ||||||||||
Sbjct: 901  ctctcatcatgaacctctatgagagctgtca 871
to top
>ref|XM_450324.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1270

 Score =  111 bits (56), Expect = 2e-21
 Identities = 197/244 (80%)
 Strand = Plus / Minus

                                                                        
Query: 211  gcagaaactccggcattctgcacataagcaacatcatctgggttgaatagcccagattca 270
            |||||||| || ||||||||||| || ||||||||||| ||  |||| || |||||||||
Sbjct: 1113 gcagaaacaccagcattctgcacgtatgcaacatcatcaggcgtgaaaagaccagattca 1054

                                                                        
Query: 271  ccgacaaccaatattcctttctccctgatggcatcgccatgcttctccagcaacgtcttc 330
            || |||||||  || ||||| ||||| |||   || ||| | ||||||| ||  ||||| 
Sbjct: 1053 ccaacaaccagaatccctttatcccttatgaggtcaccacgtttctccaacagggtcttt 994

                                                                        
Query: 331  gtgttcgaagtatccactataaatgtctcaaggctacggttgttgatgccaataagctga 390
            ||||| |||||||| ||  |||| ||||| |  || ||||| |||||||| |||||||||
Sbjct: 993  gtgtttgaagtatcaaccttaaacgtctctaaacttcggttattgatgccgataagctga 934

                                                                        
Query: 391  acaccatttattgcgaggacacgctccatctctctttcatcatgaacctcaataagagct 450
            || |||| ||||  ||| ||||| |||| ||| || |||||||||||||| || ||||||
Sbjct: 933  acgccatctattttgagcacacgatccagctccctctcatcatgaacctctatgagagct 874

                
Query: 451  gtca 454
            ||||
Sbjct: 873  gtca 870
to top
>dbj|AK059358.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-026-D08, full
            insert sequence
          Length = 1270

 Score =  111 bits (56), Expect = 2e-21
 Identities = 197/244 (80%)
 Strand = Plus / Minus

                                                                        
Query: 211  gcagaaactccggcattctgcacataagcaacatcatctgggttgaatagcccagattca 270
            |||||||| || ||||||||||| || ||||||||||| ||  |||| || |||||||||
Sbjct: 1113 gcagaaacaccagcattctgcacgtatgcaacatcatcaggcgtgaaaagaccagattca 1054

                                                                        
Query: 271  ccgacaaccaatattcctttctccctgatggcatcgccatgcttctccagcaacgtcttc 330
            || |||||||  || ||||| ||||| |||   || ||| | ||||||| ||  ||||| 
Sbjct: 1053 ccaacaaccagaatccctttatcccttatgaggtcaccacgtttctccaacagggtcttt 994

                                                                        
Query: 331  gtgttcgaagtatccactataaatgtctcaaggctacggttgttgatgccaataagctga 390
            ||||| |||||||| ||  |||| ||||| |  || ||||| |||||||| |||||||||
Sbjct: 993  gtgtttgaagtatcaaccttaaacgtctctaaacttcggttattgatgccgataagctga 934

                                                                        
Query: 391  acaccatttattgcgaggacacgctccatctctctttcatcatgaacctcaataagagct 450
            || |||| ||||  ||| ||||| |||| ||| || |||||||||||||| || ||||||
Sbjct: 933  acgccatctattttgagcacacgatccagctccctctcatcatgaacctctatgagagct 874

                
Query: 451  gtca 454
            ||||
Sbjct: 873  gtca 870
to top
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 72/80 (90%)
 Strand = Plus / Minus

                                                                            
Query: 435      aacctcaataagagctgtcaatcccaactccttgcatatccgtagaaagtattttatgtc 494
                |||||||||||||||||||| |||||||||||| ||||| || || ||||| ||||||||
Sbjct: 13949015 aacctcaataagagctgtcattcccaactccttacatatgcgaaggaagtactttatgtc 13948956

                                    
Query: 495      aagatcagttagcacagcgg 514
                 ||||||| |||||||||||
Sbjct: 13948955 gagatcaggtagcacagcgg 13948936



 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 71/81 (87%)
 Strand = Plus / Minus

                                                                            
Query: 359      caaggctacggttgttgatgccaataagctgaacaccatttattgcgaggacacgctcca 418
                ||||||| ||||| |||||||||||||||||||| ||| ||||    || ||||||||||
Sbjct: 13949402 caaggctgcggttattgatgccaataagctgaactccacttatattcagcacacgctcca 13949343

                                     
Query: 419      tctctctttcatcatgaacct 439
                |||| ||||||||||||||||
Sbjct: 13949342 tctccctttcatcatgaacct 13949322



 Score = 79.8 bits (40), Expect = 8e-12
 Identities = 64/72 (88%)
 Strand = Plus / Minus

                                                                            
Query: 208      acagcagaaactccggcattctgcacataagcaacatcatctgggttgaatagcccagat 267
                ||||| |||||||| ||||| |||||||||||||| |||||||||||||| ||||| |||
Sbjct: 13950618 acagcggaaactccagcattttgcacataagcaacgtcatctgggttgaacagccctgat 13950559

                            
Query: 268      tcaccgacaacc 279
                || || ||||||
Sbjct: 13950558 tcgccaacaacc 13950547



 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 59/68 (86%)
 Strand = Plus / Minus

                                                                            
Query: 277      accaatattcctttctccctgatggcatcgccatgcttctccagcaacgtcttcgtgttc 336
                ||||||||||| ||||||||||||| ||| |||||| | || |||||| |||| ||||| 
Sbjct: 13949633 accaatattcccttctccctgatggtatcaccatgcatatctagcaacatctttgtgttt 13949574

                        
Query: 337      gaagtatc 344
                ||||||||
Sbjct: 13949573 gaagtatc 13949566



 Score = 46.1 bits (23), Expect = 0.12
 Identities = 59/71 (83%)
 Strand = Plus / Minus

                                                                            
Query: 136      agttctttcccgaagagtccggcgatggcgagccctgggtctgcttgcttcaccaaggat 195
                ||||||||||||||||| || || |||||  | || |||||  ||||||| |||| ||||
Sbjct: 13951021 agttctttcccgaagagcccagcaatggctcgtccagggtcgtcttgcttgaccagggat 13950962

                           
Query: 196      tctcctaccaa 206
                ||||| |||||
Sbjct: 13950961 tctcccaccaa 13950951
to top
>dbj|AP004554.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
            clone:P0005C02
          Length = 62423

 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 72/80 (90%)
 Strand = Plus / Minus

                                                                        
Query: 435  aacctcaataagagctgtcaatcccaactccttgcatatccgtagaaagtattttatgtc 494
            |||||||||||||||||||| |||||||||||| ||||| || || ||||| ||||||||
Sbjct: 3338 aacctcaataagagctgtcattcccaactccttacatatgcgaaggaagtactttatgtc 3279

                                
Query: 495  aagatcagttagcacagcgg 514
             ||||||| |||||||||||
Sbjct: 3278 gagatcaggtagcacagcgg 3259



 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 71/81 (87%)
 Strand = Plus / Minus

                                                                        
Query: 359  caaggctacggttgttgatgccaataagctgaacaccatttattgcgaggacacgctcca 418
            ||||||| ||||| |||||||||||||||||||| ||| ||||    || ||||||||||
Sbjct: 3725 caaggctgcggttattgatgccaataagctgaactccacttatattcagcacacgctcca 3666

                                 
Query: 419  tctctctttcatcatgaacct 439
            |||| ||||||||||||||||
Sbjct: 3665 tctccctttcatcatgaacct 3645



 Score = 79.8 bits (40), Expect = 8e-12
 Identities = 64/72 (88%)
 Strand = Plus / Minus

                                                                        
Query: 208  acagcagaaactccggcattctgcacataagcaacatcatctgggttgaatagcccagat 267
            ||||| |||||||| ||||| |||||||||||||| |||||||||||||| ||||| |||
Sbjct: 4941 acagcggaaactccagcattttgcacataagcaacgtcatctgggttgaacagccctgat 4882

                        
Query: 268  tcaccgacaacc 279
            || || ||||||
Sbjct: 4881 tcgccaacaacc 4870



 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 59/68 (86%)
 Strand = Plus / Minus

                                                                        
Query: 277  accaatattcctttctccctgatggcatcgccatgcttctccagcaacgtcttcgtgttc 336
            ||||||||||| ||||||||||||| ||| |||||| | || |||||| |||| ||||| 
Sbjct: 3956 accaatattcccttctccctgatggtatcaccatgcatatctagcaacatctttgtgttt 3897

                    
Query: 337  gaagtatc 344
            ||||||||
Sbjct: 3896 gaagtatc 3889



 Score = 46.1 bits (23), Expect = 0.12
 Identities = 59/71 (83%)
 Strand = Plus / Minus

                                                                        
Query: 136  agttctttcccgaagagtccggcgatggcgagccctgggtctgcttgcttcaccaaggat 195
            ||||||||||||||||| || || |||||  | || |||||  ||||||| |||| ||||
Sbjct: 5344 agttctttcccgaagagcccagcaatggctcgtccagggtcgtcttgcttgaccagggat 5285

                       
Query: 196  tctcctaccaa 206
            ||||| |||||
Sbjct: 5284 tctcccaccaa 5274
to top
>dbj|AP005485.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OJ1136_D12
          Length = 105521

 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 72/80 (90%)
 Strand = Plus / Minus

                                                                         
Query: 435   aacctcaataagagctgtcaatcccaactccttgcatatccgtagaaagtattttatgtc 494
             |||||||||||||||||||| |||||||||||| ||||| || || ||||| ||||||||
Sbjct: 93410 aacctcaataagagctgtcattcccaactccttacatatgcgaaggaagtactttatgtc 93351

                                 
Query: 495   aagatcagttagcacagcgg 514
              ||||||| |||||||||||
Sbjct: 93350 gagatcaggtagcacagcgg 93331



 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 71/81 (87%)
 Strand = Plus / Minus

                                                                         
Query: 359   caaggctacggttgttgatgccaataagctgaacaccatttattgcgaggacacgctcca 418
             ||||||| ||||| |||||||||||||||||||| ||| ||||    || ||||||||||
Sbjct: 93797 caaggctgcggttattgatgccaataagctgaactccacttatattcagcacacgctcca 93738

                                  
Query: 419   tctctctttcatcatgaacct 439
             |||| ||||||||||||||||
Sbjct: 93737 tctccctttcatcatgaacct 93717



 Score = 79.8 bits (40), Expect = 8e-12
 Identities = 64/72 (88%)
 Strand = Plus / Minus

                                                                         
Query: 208   acagcagaaactccggcattctgcacataagcaacatcatctgggttgaatagcccagat 267
             ||||| |||||||| ||||| |||||||||||||| |||||||||||||| ||||| |||
Sbjct: 95013 acagcggaaactccagcattttgcacataagcaacgtcatctgggttgaacagccctgat 94954

                         
Query: 268   tcaccgacaacc 279
             || || ||||||
Sbjct: 94953 tcgccaacaacc 94942



 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 59/68 (86%)
 Strand = Plus / Minus

                                                                         
Query: 277   accaatattcctttctccctgatggcatcgccatgcttctccagcaacgtcttcgtgttc 336
             ||||||||||| ||||||||||||| ||| |||||| | || |||||| |||| ||||| 
Sbjct: 94028 accaatattcccttctccctgatggtatcaccatgcatatctagcaacatctttgtgttt 93969

                     
Query: 337   gaagtatc 344
             ||||||||
Sbjct: 93968 gaagtatc 93961



 Score = 46.1 bits (23), Expect = 0.12
 Identities = 59/71 (83%)
 Strand = Plus / Minus

                                                                         
Query: 136   agttctttcccgaagagtccggcgatggcgagccctgggtctgcttgcttcaccaaggat 195
             ||||||||||||||||| || || |||||  | || |||||  ||||||| |||| ||||
Sbjct: 95416 agttctttcccgaagagcccagcaatggctcgtccagggtcgtcttgcttgaccagggat 95357

                        
Query: 196   tctcctaccaa 206
             ||||| |||||
Sbjct: 95356 tctcccaccaa 95346
to top
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
               sequence
          Length = 22696651

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 62/73 (84%)
 Strand = Plus / Plus

                                                                           
Query: 367     cggttgttgatgccaataagctgaacaccatttattgcgaggacacgctccatctctctt 426
               ||||| |||||||| ||||||||||| |||| ||||  ||| ||||| |||| ||| || 
Sbjct: 4148273 cggttattgatgccgataagctgaacgccatctattttgagcacacgatccagctccctc 4148332

                            
Query: 427     tcatcatgaacct 439
               |||||||||||||
Sbjct: 4148333 tcatcatgaacct 4148345



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 59/69 (85%)
 Strand = Plus / Plus

                                                                           
Query: 211     gcagaaactccggcattctgcacataagcaacatcatctgggttgaatagcccagattca 270
               |||||||| || ||||||||||| || ||||||||||| ||  |||| || |||||||||
Sbjct: 4147630 gcagaaacaccagcattctgcacgtatgcaacatcatcaggcgtgaaaagaccagattca 4147689

                        
Query: 271     ccgacaacc 279
               || ||||||
Sbjct: 4147690 ccaacaacc 4147698
to top
>dbj|AP005738.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
              clone:OSJNBb0066C12
          Length = 168874

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 62/73 (84%)
 Strand = Plus / Plus

                                                                          
Query: 367    cggttgttgatgccaataagctgaacaccatttattgcgaggacacgctccatctctctt 426
              ||||| |||||||| ||||||||||| |||| ||||  ||| ||||| |||| ||| || 
Sbjct: 131754 cggttattgatgccgataagctgaacgccatctattttgagcacacgatccagctccctc 131813

                           
Query: 427    tcatcatgaacct 439
              |||||||||||||
Sbjct: 131814 tcatcatgaacct 131826



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 59/69 (85%)
 Strand = Plus / Plus

                                                                          
Query: 211    gcagaaactccggcattctgcacataagcaacatcatctgggttgaatagcccagattca 270
              |||||||| || ||||||||||| || ||||||||||| ||  |||| || |||||||||
Sbjct: 131111 gcagaaacaccagcattctgcacgtatgcaacatcatcaggcgtgaaaagaccagattca 131170

                       
Query: 271    ccgacaacc 279
              || ||||||
Sbjct: 131171 ccaacaacc 131179
to top
>ref|NM_124197.2| Arabidopsis thaliana indole-3-glycerol-phosphate synthase AT5G48220
           mRNA, complete cds
          Length = 1413

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 74/90 (82%)
 Strand = Plus / Minus

                                                                       
Query: 351 aaatgtctcaaggctacggttgttgatgccaataagctgaacaccatttattgcgaggac 410
           |||||| |||||| ||||||| ||||||||||| ||||  || || |  ||||| || ||
Sbjct: 997 aaatgtttcaaggttacggttattgatgccaatgagctcgactccttcaattgcaagaac 938

                                         
Query: 411 acgctccatctctctttcatcatgaacctc 440
           ||| |||||||| ||||| ||||| |||||
Sbjct: 937 acgatccatctccctttcgtcatggacctc 908
to top
>gb|AY060498.1| Arabidopsis thaliana AT5g48220/MIF21_11 mRNA, complete cds
          Length = 1140

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 74/90 (82%)
 Strand = Plus / Minus

                                                                       
Query: 351 aaatgtctcaaggctacggttgttgatgccaataagctgaacaccatttattgcgaggac 410
           |||||| |||||| ||||||| ||||||||||| ||||  || || |  ||||| || ||
Sbjct: 912 aaatgtttcaaggttacggttattgatgccaatgagctcgactccttcaattgcaagaac 853

                                         
Query: 411 acgctccatctctctttcatcatgaacctc 440
           ||| |||||||| ||||| ||||| |||||
Sbjct: 852 acgatccatctccctttcgtcatggacctc 823
to top
>gb|AY052223.1| Arabidopsis thaliana AT5g48220/MIF21_11 mRNA, complete cds
          Length = 1358

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 74/90 (82%)
 Strand = Plus / Minus

                                                                       
Query: 351 aaatgtctcaaggctacggttgttgatgccaataagctgaacaccatttattgcgaggac 410
           |||||| |||||| ||||||| ||||||||||| ||||  || || |  ||||| || ||
Sbjct: 945 aaatgtttcaaggttacggttattgatgccaatgagctcgactccttcaattgcaagaac 886

                                         
Query: 411 acgctccatctctctttcatcatgaacctc 440
           ||| |||||||| ||||| ||||| |||||
Sbjct: 885 acgatccatctccctttcgtcatggacctc 856
to top
>gb|AY050327.1| Arabidopsis thaliana AT5g48220/MIF21_11 mRNA, complete cds
          Length = 1407

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 74/90 (82%)
 Strand = Plus / Minus

                                                                       
Query: 351 aaatgtctcaaggctacggttgttgatgccaataagctgaacaccatttattgcgaggac 410
           |||||| |||||| ||||||| ||||||||||| ||||  || || |  ||||| || ||
Sbjct: 997 aaatgtttcaaggttacggttattgatgccaatgagctcgactccttcaattgcaagaac 938

                                         
Query: 411 acgctccatctctctttcatcatgaacctc 440
           ||| |||||||| ||||| ||||| |||||
Sbjct: 937 acgatccatctccctttcgtcatggacctc 908
to top
>emb|BX833681.1|CNS0A1R5 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTSIL70ZC05 of Silique of strain col-0 of Arabidopsis
           thaliana (thale cress)
          Length = 700

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 74/90 (82%)
 Strand = Plus / Minus

                                                                       
Query: 351 aaatgtctcaaggctacggttgttgatgccaataagctgaacaccatttattgcgaggac 410
           |||||| |||||| ||||||| ||||||||||| ||||  || || |  ||||| || ||
Sbjct: 287 aaatgtttcaaggttacggttattgatgccaatgagctcgactccttcaattgcaagaac 228

                                         
Query: 411 acgctccatctctctttcatcatgaacctc 440
           ||| |||||||| ||||| ||||| |||||
Sbjct: 227 acgatccatctccctttcgtcatggacctc 198
to top
>emb|BX830453.1|CNS0A060 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB82ZE09 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 1306

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 74/90 (82%)
 Strand = Plus / Minus

                                                                       
Query: 351 aaatgtctcaaggctacggttgttgatgccaataagctgaacaccatttattgcgaggac 410
           |||||| |||||| ||||||| ||||||||||| ||||  || || |  ||||| || ||
Sbjct: 932 aaatgtttcaaggttacggttattgatgccaatgagctcgactccttcaattgcaagaac 873

                                         
Query: 411 acgctccatctctctttcatcatgaacctc 440
           ||| |||||||| ||||| ||||| |||||
Sbjct: 872 acgatccatctccctttcgtcatggacctc 843
to top
>emb|BX832169.1|CNS09ZME Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTPGH56ZC05 of Hormone Treated Callus of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1321

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 74/90 (82%)
 Strand = Plus / Minus

                                                                       
Query: 351 aaatgtctcaaggctacggttgttgatgccaataagctgaacaccatttattgcgaggac 410
           |||||| |||||| ||||||| ||||||||||| ||||  || || |  ||||| || ||
Sbjct: 950 aaatgtttcaaggttacggttattgatgccaatgagctcgactccttcaattgcaagaac 891

                                         
Query: 411 acgctccatctctctttcatcatgaacctc 440
           ||| |||||||| ||||| ||||| |||||
Sbjct: 890 acgatccatctccctttcgtcatggacctc 861
to top
>ref|XM_472804.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1182

 Score = 48.1 bits (24), Expect = 0.029
 Identities = 72/88 (81%)
 Strand = Plus / Minus

                                                                       
Query: 355 gtctcaaggctacggttgttgatgccaataagctgaacaccatttattgcgaggacacgc 414
           ||||| ||| ||||||| |||||||| || ||||| ||||||| |||  | |  ||||| 
Sbjct: 938 gtctcgaggttacggttattgatgccgatgagctggacaccatctatccctaacacacgg 879

                                       
Query: 415 tccatctctctttcatcatgaacctcaa 442
           ||||| || ||||||||||| |||||||
Sbjct: 878 tccatttccctttcatcatgcacctcaa 851
to top
>gb|BT017430.1| Zea mays clone EL01N0403D03.c mRNA sequence
          Length = 1119

 Score = 48.1 bits (24), Expect = 0.029
 Identities = 75/92 (81%)
 Strand = Plus / Plus

                                                                       
Query: 351 aaatgtctcaaggctacggttgttgatgccaataagctgaacaccatttattgcgaggac 410
           ||||||||| ||  ||||||| |||||||| || ||||| |||||||  ||  | |  ||
Sbjct: 553 aaatgtctcgagattacggttattgatgccgatgagctgtacaccatcaatccctaaaac 612

                                           
Query: 411 acgctccatctctctttcatcatgaacctcaa 442
           ||| ||||| |||||||| |||||||||||||
Sbjct: 613 acggtccatttctctttcgtcatgaacctcaa 644
to top
>emb|CR938710.1| Medicago truncatula chromosome 5 clone mth2-170k9, COMPLETE SEQUENCE
          Length = 123977

 Score = 48.1 bits (24), Expect = 0.029
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                     
Query: 365   tacggttgttgatgccaataagct 388
             ||||||||||||||||||||||||
Sbjct: 41997 tacggttgttgatgccaataagct 41974
to top
>dbj|AK101835.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033069C16, full
           insert sequence
          Length = 974

 Score = 48.1 bits (24), Expect = 0.029
 Identities = 72/88 (81%)
 Strand = Plus / Minus

                                                                       
Query: 355 gtctcaaggctacggttgttgatgccaataagctgaacaccatttattgcgaggacacgc 414
           ||||| ||| ||||||| |||||||| || ||||| ||||||| |||  | |  ||||| 
Sbjct: 499 gtctcgaggttacggttattgatgccgatgagctggacaccatctatccctaacacacgg 440

                                       
Query: 415 tccatctctctttcatcatgaacctcaa 442
           ||||| || ||||||||||| |||||||
Sbjct: 439 tccatttccctttcatcatgcacctcaa 412
to top
>gb|AY110654.1| Zea mays CL6_1 mRNA sequence
          Length = 798

 Score = 48.1 bits (24), Expect = 0.029
 Identities = 75/92 (81%)
 Strand = Plus / Plus

                                                                       
Query: 351 aaatgtctcaaggctacggttgttgatgccaataagctgaacaccatttattgcgaggac 410
           ||||||||| ||  ||||||| |||||||| || ||||| |||||||  ||  | |  ||
Sbjct: 528 aaatgtctcgagattacggttattgatgccgatgagctgtacaccatcaatccctaaaac 587

                                           
Query: 411 acgctccatctctctttcatcatgaacctcaa 442
           ||| ||||| |||||||| |||||||||||||
Sbjct: 588 acggtccatttctctttcgtcatgaacctcaa 619
to top
>emb|AL607024.17| Mouse DNA sequence from clone RP23-194P5 on chromosome 11 Contains a
             novel gene, the Pafah1b1 gene for platelet-activating
             factor acetylhydrolase isoform 1b beta1 subunit, the 5'
             end of a novel gene and two CpG islands, complete sequence
          Length = 137908

 Score = 44.1 bits (22), Expect = 0.46
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 26    accaaagaaaacaagagaccat 47
             ||||||||||||||||||||||
Sbjct: 19086 accaaagaaaacaagagaccat 19065
to top
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 44.1 bits (22), Expect = 0.46
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                      
Query: 79       gcaactactactactagtctac 100
                ||||||||||||||||||||||
Sbjct: 20030886 gcaactactactactagtctac 20030907
to top
>dbj|AP004361.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
              clone:OSJNBa0062A24
          Length = 148362

 Score = 44.1 bits (22), Expect = 0.46
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 79     gcaactactactactagtctac 100
              ||||||||||||||||||||||
Sbjct: 133795 gcaactactactactagtctac 133816
to top
>dbj|AP004233.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:OSJNBa0065J17
          Length = 139014

 Score = 44.1 bits (22), Expect = 0.46
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 79    gcaactactactactagtctac 100
             ||||||||||||||||||||||
Sbjct: 28848 gcaactactactactagtctac 28869
to top
>dbj|AK110526.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-167-H10, full
           insert sequence
          Length = 847

 Score = 44.1 bits (22), Expect = 0.46
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 79  gcaactactactactagtctac 100
           ||||||||||||||||||||||
Sbjct: 617 gcaactactactactagtctac 638
to top
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 83       ctactactactagtctaccac 103
                |||||||||||||||||||||
Sbjct: 33880013 ctactactactagtctaccac 33879993



 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 369      gttgttgatgccaataagct 388
                ||||||||||||||||||||
Sbjct: 20488986 gttgttgatgccaataagct 20488967
to top
>gb|AC122838.3| Mus musculus BAC clone RP23-191E1 from 3, complete sequence
          Length = 196023

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 92    ctagtctaccacaaacaagtc 112
             |||||||||||||||||||||
Sbjct: 36174 ctagtctaccacaaacaagtc 36154
to top
>gb|AC139172.2| Oryza sativa chromosome 3 BAC OSJNBb0042K11 genomic sequence, complete
             sequence
          Length = 27024

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 83    ctactactactagtctaccac 103
             |||||||||||||||||||||
Sbjct: 14215 ctactactactagtctaccac 14195
to top
>gb|AC116677.11| Mus musculus chromosome 3, clone RP23-111M12, complete sequence
          Length = 214206

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 481    aagtattttatgtcaagatcagtta 505
              |||||||||||| ||||||||||||
Sbjct: 144569 aagtattttatgccaagatcagtta 144593
to top
>dbj|AK055090.1| Homo sapiens cDNA FLJ30528 fis, clone BRAWH2001037
          Length = 2128

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 370  ttgttgatgccaataagctga 390
            |||||||||||||||||||||
Sbjct: 1939 ttgttgatgccaataagctga 1959
to top
>gb|AC092182.9| Homo sapiens 12p BAC RP11-174D5 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 81483

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 42    gaccattattattaaaattca 62
             |||||||||||||||||||||
Sbjct: 72071 gaccattattattaaaattca 72091
to top
>gb|AC018683.4|AC018683 Homo sapiens BAC clone RP11-423P14 from 4, complete sequence
          Length = 201907

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 47    ttattattaaaattcaaatat 67
             |||||||||||||||||||||
Sbjct: 82918 ttattattaaaattcaaatat 82898
to top
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 83       ctactactactagtctaccac 103
                |||||||||||||||||||||
Sbjct: 33970485 ctactactactagtctaccac 33970465



 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 369      gttgttgatgccaataagct 388
                ||||||||||||||||||||
Sbjct: 20482015 gttgttgatgccaataagct 20481996
to top
>gb|AC155657.8| Mus musculus 6 BAC RP24-113L15 (Roswell Park Cancer Institute (C57BL/6J
             Male) Mouse BAC Library) complete sequence
          Length = 159299

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 45    cattattattaaaattcaaat 65
             |||||||||||||||||||||
Sbjct: 12301 cattattattaaaattcaaat 12281
to top
>gb|AC013402.9| Homo sapiens BAC clone RP11-134N15 from 2, complete sequence
          Length = 177882

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 370   ttgttgatgccaataagctga 390
             |||||||||||||||||||||
Sbjct: 13219 ttgttgatgccaataagctga 13239
to top
>dbj|AB023039.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MIF21
          Length = 59372

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 66/81 (81%)
 Strand = Plus / Minus

                                                                         
Query: 359   caaggctacggttgttgatgccaataagctgaacaccatttattgcgaggacacgctcca 418
             ||||| ||||||| ||||||||||| ||||  || || |  ||||| || ||||| ||||
Sbjct: 43149 caaggttacggttattgatgccaatgagctcgactccttcaattgcaagaacacgatcca 43090

                                  
Query: 419   tctctctttcatcatgaacct 439
             |||| ||||| ||||| ||||
Sbjct: 43089 tctccctttcgtcatggacct 43069
to top
>emb|AL929445.8| Mouse DNA sequence from clone RP23-185M22 on chromosome 4, complete
             sequence
          Length = 203623

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 45    cattattattaaaattcaaat 65
             |||||||||||||||||||||
Sbjct: 64031 cattattattaaaattcaaat 64051
to top
>gb|AC132592.3| Mus musculus BAC clone RP24-303I6 from 3, complete sequence
          Length = 174752

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 92    ctagtctaccacaaacaagtc 112
             |||||||||||||||||||||
Sbjct: 67996 ctagtctaccacaaacaagtc 68016
to top
>gb|AC132453.3| Mus musculus BAC clone RP23-200J18 from 6, complete sequence
          Length = 206248

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 45     cattattattaaaattcaaat 65
              |||||||||||||||||||||
Sbjct: 169568 cattattattaaaattcaaat 169548
to top
>ref|XM_514712.1| PREDICTED: Pan troglodytes LOC458321 (LOC458321), mRNA
          Length = 5819

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 230 gcacataagcaacatcatct 249
           ||||||||||||||||||||
Sbjct: 902 gcacataagcaacatcatct 921
to top
>gb|AE006428.1| Lactococcus lactis subsp. lactis IL1403 section 190 of 218 of the
            complete genome
          Length = 10029

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 477  tagaaagtattttatgtcaa 496
            ||||||||||||||||||||
Sbjct: 6283 tagaaagtattttatgtcaa 6264
to top
>gb|DQ158856.1| Bigelowiella natans nucleomorph chromosome 1, partial sequence
          Length = 140590

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 43    accattattattaaaattca 62
             ||||||||||||||||||||
Sbjct: 65776 accattattattaaaattca 65757
to top
>gb|AC091302.5| Oryza sativa chromosome 3 BAC OSJNBb0015I21 genomic sequence,
            complete sequence
          Length = 101073

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 369  gttgttgatgccaataagct 388
            ||||||||||||||||||||
Sbjct: 3051 gttgttgatgccaataagct 3032
to top
>emb|AJ011653.1|LLA011653 Lactococcus lactis (strain MG1363) galactose operon (galAMKTE genes)
          Length = 7309

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 477  tagaaagtattttatgtcaa 496
            ||||||||||||||||||||
Sbjct: 4395 tagaaagtattttatgtcaa 4414
to top
>gb|BC014041.2| Homo sapiens zinc finger, NFX1-type containing 1, mRNA (cDNA clone
           IMAGE:4546448), partial cds
          Length = 2810

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 230 gcacataagcaacatcatct 249
           ||||||||||||||||||||
Sbjct: 789 gcacataagcaacatcatct 808
to top
>emb|AL049766.14|HSDJ686N3 Human DNA sequence from clone RP4-686N3 on chromosome 20q13.2-13.2
             Contains the 3' end of the DDX27 gene for DEAD/H
             (Asp-Glu-Ala-Asp/His) box polypeptide 27, the KIAA1404
             gene, a novel gene and two CpG islands, complete sequence
          Length = 110293

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 230   gcacataagcaacatcatct 249
             ||||||||||||||||||||
Sbjct: 48336 gcacataagcaacatcatct 48317
to top
>emb|AL592102.1|LISINP100 Listeria innocua plasmid pLI100, complete sequence
          Length = 81905

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 232   acataagcaacatcatctgg 251
             ||||||||||||||||||||
Sbjct: 32852 acataagcaacatcatctgg 32833
to top
>gb|BC030789.1| Homo sapiens cDNA clone IMAGE:5265582, containing frame-shift
           errors
          Length = 4963

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 230 gcacataagcaacatcatct 249
           ||||||||||||||||||||
Sbjct: 903 gcacataagcaacatcatct 922
to top
>dbj|AK096594.1| Homo sapiens cDNA FLJ39275 fis, clone OCBBF2010830
          Length = 3133

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 230  gcacataagcaacatcatct 249
            ||||||||||||||||||||
Sbjct: 1180 gcacataagcaacatcatct 1199
to top
>dbj|AK002139.1| Homo sapiens cDNA FLJ11277 fis, clone PLACE1009404
          Length = 2839

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 230 gcacataagcaacatcatct 249
           ||||||||||||||||||||
Sbjct: 886 gcacataagcaacatcatct 905
to top
>dbj|AK022641.1| Homo sapiens cDNA FLJ12579 fis, clone NT2RM4001084, weakly similar
           to HYPOTHETICAL 105.6 KD PROTEIN C16C9.06C IN CHROMOSOME
           I
          Length = 2122

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 230 gcacataagcaacatcatct 249
           ||||||||||||||||||||
Sbjct: 138 gcacataagcaacatcatct 157
to top
>ref|NM_021035.1| Homo sapiens zinc finger, NFX1-type containing 1 (ZNFX1), mRNA
          Length = 7209

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 230 gcacataagcaacatcatct 249
           ||||||||||||||||||||
Sbjct: 811 gcacataagcaacatcatct 830
to top
>emb|AL929393.8| Mouse DNA sequence from clone RP23-94P7 on chromosome 4, complete
             sequence
          Length = 202299

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 222   ggcattctgcacataagcaa 241
             ||||||||||||||||||||
Sbjct: 57039 ggcattctgcacataagcaa 57020
to top
>emb|BX511233.10| Zebrafish DNA sequence from clone CH211-152P11 in linkage group 19,
              complete sequence
          Length = 193921

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 25     aaccaaagaaaacaagagac 44
              ||||||||||||||||||||
Sbjct: 158854 aaccaaagaaaacaagagac 158873
to top
>gb|AC084319.5|AC084319 Oryza sativa chromosome 3 BAC OSJNBa0004B24 genomic sequence, complete
              sequence
          Length = 152883

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 369    gttgttgatgccaataagct 388
              ||||||||||||||||||||
Sbjct: 133286 gttgttgatgccaataagct 133267
to top
>dbj|AP006842.1| Bacteroides fragilis YCH46 plasmid pBFY46 DNA, complete sequence
          Length = 33716

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 383   taagctgaacaccatttatt 402
             ||||||||||||||||||||
Sbjct: 21136 taagctgaacaccatttatt 21117
to top
>gb|U60828.1|LLU60828 Lactococcus lactis galactose-lactose operon, complete sequence
          Length = 14263

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 477  tagaaagtattttatgtcaa 496
            ||||||||||||||||||||
Sbjct: 6315 tagaaagtattttatgtcaa 6334
to top
>gb|AF082008.1|AF082008 Lactococcus lactis NCDO2054 gal-lac operon, partial sequence
          Length = 7172

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 477 tagaaagtattttatgtcaa 496
           ||||||||||||||||||||
Sbjct: 537 tagaaagtattttatgtcaa 556
to top
>dbj|AB037825.1| Homo sapiens mRNA for KIAA1404 protein, partial cds
          Length = 7204

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 230 gcacataagcaacatcatct 249
           ||||||||||||||||||||
Sbjct: 811 gcacataagcaacatcatct 830


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,538,060
Number of Sequences: 3902068
Number of extensions: 5538060
Number of successful extensions: 122584
Number of sequences better than 10.0: 66
Number of HSP's better than 10.0 without gapping: 65
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 122157
Number of HSP's gapped (non-prelim): 414
length of query: 527
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 504
effective length of database: 17,143,297,704
effective search space: 8640222042816
effective search space used: 8640222042816
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
to top