ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags25i06
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_464530.1| Oryza sativa (japonica cultivar-group), mRNA 256 8e-65
2ref|XM_507458.1| PREDICTED Oryza sativa (japonica cultivar-group... 256 8e-65
3ref|XM_506752.2| PREDICTED Oryza sativa (japonica cultivar-group... 256 8e-65
4dbj|AK101844.1| Oryza sativa (japonica cultivar-group) cDNA clon... 256 8e-65
5dbj|AK099277.1| Oryza sativa (japonica cultivar-group) cDNA clon... 256 8e-65
6dbj|AK068376.1| Oryza sativa (japonica cultivar-group) cDNA clon... 256 8e-65
7gb|AY110039.1| Zea mays CL15732_1 mRNA sequence 202 1e-48
8dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 178 1e-41
9dbj|AP004045.3| Oryza sativa (japonica cultivar-group) genomic D... 178 1e-41
10ref|NM_128115.2| Arabidopsis thaliana unknown protein AT2G25570 ... 72 2e-09
11gb|BT015506.1| Arabidopsis thaliana At2g25570 mRNA sequence 72 2e-09
12gb|BT025254.1| Arabidopsis thaliana At2g25570 mRNA, complete cds 72 2e-09
13gb|DQ446566.1| Arabidopsis thaliana clone pENTR221-At2g25565 unk... 72 2e-09
14emb|BX821444.1|CNS0A95N Arabidopsis thaliana Full-length cDNA Co... 72 2e-09
15gb|AY086172.1| Arabidopsis thaliana clone 21954 mRNA, complete s... 72 2e-09
16dbj|AK176743.1| Arabidopsis thaliana mRNA, complete cds, clone: ... 72 2e-09
17emb|BX821302.1|CNS0A929 Arabidopsis thaliana Full-length cDNA Co... 64 6e-07
18gb|AC006300.4| Arabidopsis thaliana chromosome 2 clone F13B15 ma... 48 0.035
19gb|AC006053.3| Arabidopsis thaliana chromosome 2 clone F3N11 map... 48 0.035
20gb|BT013087.1| Lycopersicon esculentum clone 114353F, mRNA sequence 46 0.14
21emb|BX901957.4| Zebrafish DNA sequence from clone CH211-150G5 in... 44 0.54
22emb|Z83848.1|HS57A13 Human DNA sequence from clone RP1-57A13 on ... 44 0.54
23emb|AL136449.10| Human DNA sequence from clone RP1-292M15 on chr... 44 0.54
24ref|XM_681907.1| PREDICTED: Danio rerio similar to tryptase 4 (L... 44 0.54
25dbj|AP004951.1| Lotus japonicus genomic DNA, chromosome 2, clone... 44 0.54
26gb|AC159381.10| Mus musculus 6 BAC RP24-460E4 (Roswell Park Canc... 42 2.1
27gb|AC183376.4| Pan troglodytes BAC clone CH251-735O6 from chromo... 42 2.1
28gb|AF130866.6| Homo sapiens chromosome 8 clone GS1-172N13 map q2... 42 2.1
29gb|AC183528.2| Pan troglodytes BAC clone CH251-737P22 from chrom... 42 2.1
30gb|AC007964.3| Homo sapiens BAC clone GS1-179L18 from 7, complet... 42 2.1
31emb|AL359457.12| Human DNA sequence from clone RP11-76K19 on chr... 42 2.1
32emb|AL355132.19| Human DNA sequence from clone RP11-181D10 on ch... 42 2.1
33emb|BX640588.5| Zebrafish DNA sequence from clone DKEY-110L7 in ... 42 2.1
34gb|AC174233.4| Pan troglodytes BAC clone CH251-560K10 from chrom... 42 2.1
35gb|AC138185.2| Homo sapiens chromosome 8, clone RP11-640O8, comp... 42 2.1
36gb|AC013734.4|AC013734 Homo sapiens BAC clone RP11-557B9 from Y,... 42 2.1
37gb|AC006327.3| Homo sapiens BAC clone RP11-59I21 from 2, complet... 42 2.1
38emb|BX255963.11| Zebrafish DNA sequence from clone CH211-195D17 ... 42 2.1
39dbj|AP005856.2| Homo sapiens genomic DNA, chromosome 8q24, clone... 42 2.1
40gb|AC170088.9| Mus musculus BAC RP23-94A1 (Roswell Park Cancer ... 42 2.1
41ref|XM_631998.1| Dictyostelium discoideum ABC transporter C fami... 40 8.5
42ref|NM_001031383.1| Gallus gallus phosphoglucomutase 2 (PGM2), mRNA 40 8.5
43gb|AF053356.1| Homo sapiens chromosome 7q22 sequence, complete s... 40 8.5
44gb|AC122893.6| Mus musculus BAC clone RP23-67C3 from chromosome ... 40 8.5
45ref|XM_868499.1| PREDICTED: Bos taurus similar to tolloid-like 1... 40 8.5
46gb|AC138376.11| Mus musculus chromosome 7, clone RP23-53O7, comp... 40 8.5
47ref|XM_420895.1| PREDICTED: Gallus gallus similar to phosphogluc... 40 8.5
48gb|AC074277.6| Homo sapiens 3 BAC RP11-82N13 (Roswell Park Cance... 40 8.5
49gb|AC104323.27| Mus musculus strain C57BL/6J chromosome 17 clone... 40 8.5
50emb|AL096710.8|HSDJ61B2 Human DNA sequence from clone RP1-61B2 o... 40 8.5
51emb|AJ721042.1| Gallus gallus mRNA for hypothetical protein, clo... 40 8.5
52gb|AC098972.2| Homo sapiens chromosome 3 clone RP11-197J13, comp... 40 8.5
53gb|AF474335.1| Dictyostelium discoideum ABC transporter ABCC.3 (... 40 8.5
54ref|XM_682795.1| PREDICTED: Danio rerio hypothetical protein LOC... 40 8.5
55gb|AC009488.5| Homo sapiens BAC clone RP11-336D7 from 7, complet... 40 8.5
56gb|AC154203.2| Mus musculus BAC clone RP24-387L1 from chromosome... 40 8.5
57gb|AC090514.1|AC090514 Homo sapiens chromosome 15 clone RP11-2O1... 40 8.5
58gb|AC023829.6| Homo sapiens chromosome 16 clone RP11-578P21, com... 40 8.5
59gb|AC136214.4| Mus musculus BAC clone RP23-53G11 from chromosome... 40 8.5
60gb|AF466199.1| Sorghum bicolor putative receptor protein kinase,... 40 8.5
61gb|M97764.1|HUMERPALU Homo sapiens erythropoietin gene 5' flank ... 40 8.5 
>ref|XM_464530.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1149

 Score =  256 bits (129), Expect = 8e-65
 Identities = 231/265 (87%)
 Strand = Plus / Minus

                                                                       
Query: 358 ttttcgtaatctccaagcctcttcaaccaccgtaaaccgaggtcagatccagactcagct 417
           ||||| ||||| ||||||||||||| ||| || |||||||| ||| ||||||  ||||||
Sbjct: 908 ttttcataatccccaagcctcttcagccatcgcaaaccgagatcacatccagcttcagct 849

                                                                       
Query: 418 gctatctggaactgttcttttgcaagctttactgggtcctgctgtatggtcctttttcgc 477
           || || || ||||| || ||||| ||||| ||||| ||||||||||||| ||||||||||
Sbjct: 848 gcaatttgaaactgctcctttgctagcttcactggatcctgctgtatgggcctttttcgc 789

                                                                       
Query: 478 accttcccagttgacggactcttgcctgagttgaacctggtaatgacttcaggcacttca 537
           | ||| |||||||| |||||||| |||||||||||||||||||| || ||||||||||||
Sbjct: 788 atctttccagttgatggactcttacctgagttgaacctggtaataacctcaggcacttca 729

                                                                       
Query: 538 gcacctttcagaagaagtgaaccatatgcaactgcagctccagcatgtcccttttctgaa 597
           |||||||| |  |||||||| |||||||||| |||||||||||  |||||||||||||| 
Sbjct: 728 gcaccttttaatagaagtgatccatatgcaattgcagctccagagtgtcccttttctgat 669

                                    
Query: 598 gctctatggaaacaccacatagctg 622
           ||||| |||||||||||||| ||||
Sbjct: 668 gctctgtggaaacaccacattgctg 644
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>ref|XM_507458.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1135_F06.7 mRNA
          Length = 1209

 Score =  256 bits (129), Expect = 8e-65
 Identities = 231/265 (87%)
 Strand = Plus / Minus

                                                                       
Query: 358 ttttcgtaatctccaagcctcttcaaccaccgtaaaccgaggtcagatccagactcagct 417
           ||||| ||||| ||||||||||||| ||| || |||||||| ||| ||||||  ||||||
Sbjct: 936 ttttcataatccccaagcctcttcagccatcgcaaaccgagatcacatccagcttcagct 877

                                                                       
Query: 418 gctatctggaactgttcttttgcaagctttactgggtcctgctgtatggtcctttttcgc 477
           || || || ||||| || ||||| ||||| ||||| ||||||||||||| ||||||||||
Sbjct: 876 gcaatttgaaactgctcctttgctagcttcactggatcctgctgtatgggcctttttcgc 817

                                                                       
Query: 478 accttcccagttgacggactcttgcctgagttgaacctggtaatgacttcaggcacttca 537
           | ||| |||||||| |||||||| |||||||||||||||||||| || ||||||||||||
Sbjct: 816 atctttccagttgatggactcttacctgagttgaacctggtaataacctcaggcacttca 757

                                                                       
Query: 538 gcacctttcagaagaagtgaaccatatgcaactgcagctccagcatgtcccttttctgaa 597
           |||||||| |  |||||||| |||||||||| |||||||||||  |||||||||||||| 
Sbjct: 756 gcaccttttaatagaagtgatccatatgcaattgcagctccagagtgtcccttttctgat 697

                                    
Query: 598 gctctatggaaacaccacatagctg 622
           ||||| |||||||||||||| ||||
Sbjct: 696 gctctgtggaaacaccacattgctg 672
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>ref|XM_506752.2| PREDICTED Oryza sativa (japonica cultivar-group), OJ1135_F06.7 mRNA
          Length = 1299

 Score =  256 bits (129), Expect = 8e-65
 Identities = 231/265 (87%)
 Strand = Plus / Minus

                                                                       
Query: 358 ttttcgtaatctccaagcctcttcaaccaccgtaaaccgaggtcagatccagactcagct 417
           ||||| ||||| ||||||||||||| ||| || |||||||| ||| ||||||  ||||||
Sbjct: 908 ttttcataatccccaagcctcttcagccatcgcaaaccgagatcacatccagcttcagct 849

                                                                       
Query: 418 gctatctggaactgttcttttgcaagctttactgggtcctgctgtatggtcctttttcgc 477
           || || || ||||| || ||||| ||||| ||||| ||||||||||||| ||||||||||
Sbjct: 848 gcaatttgaaactgctcctttgctagcttcactggatcctgctgtatgggcctttttcgc 789

                                                                       
Query: 478 accttcccagttgacggactcttgcctgagttgaacctggtaatgacttcaggcacttca 537
           | ||| |||||||| |||||||| |||||||||||||||||||| || ||||||||||||
Sbjct: 788 atctttccagttgatggactcttacctgagttgaacctggtaataacctcaggcacttca 729

                                                                       
Query: 538 gcacctttcagaagaagtgaaccatatgcaactgcagctccagcatgtcccttttctgaa 597
           |||||||| |  |||||||| |||||||||| |||||||||||  |||||||||||||| 
Sbjct: 728 gcaccttttaatagaagtgatccatatgcaattgcagctccagagtgtcccttttctgat 669

                                    
Query: 598 gctctatggaaacaccacatagctg 622
           ||||| |||||||||||||| ||||
Sbjct: 668 gctctgtggaaacaccacattgctg 644
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>dbj|AK101844.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033069H18, full
           insert sequence
          Length = 1299

 Score =  256 bits (129), Expect = 8e-65
 Identities = 231/265 (87%)
 Strand = Plus / Minus

                                                                       
Query: 358 ttttcgtaatctccaagcctcttcaaccaccgtaaaccgaggtcagatccagactcagct 417
           ||||| ||||| ||||||||||||| ||| || |||||||| ||| ||||||  ||||||
Sbjct: 908 ttttcataatccccaagcctcttcagccatcgcaaaccgagatcacatccagcttcagct 849

                                                                       
Query: 418 gctatctggaactgttcttttgcaagctttactgggtcctgctgtatggtcctttttcgc 477
           || || || ||||| || ||||| ||||| ||||| ||||||||||||| ||||||||||
Sbjct: 848 gcaatttgaaactgctcctttgctagcttcactggatcctgctgtatgggcctttttcgc 789

                                                                       
Query: 478 accttcccagttgacggactcttgcctgagttgaacctggtaatgacttcaggcacttca 537
           | ||| |||||||| |||||||| |||||||||||||||||||| || ||||||||||||
Sbjct: 788 atctttccagttgatggactcttacctgagttgaacctggtaataacctcaggcacttca 729

                                                                       
Query: 538 gcacctttcagaagaagtgaaccatatgcaactgcagctccagcatgtcccttttctgaa 597
           |||||||| |  |||||||| |||||||||| |||||||||||  |||||||||||||| 
Sbjct: 728 gcaccttttaatagaagtgatccatatgcaattgcagctccagagtgtcccttttctgat 669

                                    
Query: 598 gctctatggaaacaccacatagctg 622
           ||||| |||||||||||||| ||||
Sbjct: 668 gctctgtggaaacaccacattgctg 644
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>dbj|AK099277.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023109C15, full
           insert sequence
          Length = 1149

 Score =  256 bits (129), Expect = 8e-65
 Identities = 231/265 (87%)
 Strand = Plus / Minus

                                                                       
Query: 358 ttttcgtaatctccaagcctcttcaaccaccgtaaaccgaggtcagatccagactcagct 417
           ||||| ||||| ||||||||||||| ||| || |||||||| ||| ||||||  ||||||
Sbjct: 908 ttttcataatccccaagcctcttcagccatcgcaaaccgagatcacatccagcttcagct 849

                                                                       
Query: 418 gctatctggaactgttcttttgcaagctttactgggtcctgctgtatggtcctttttcgc 477
           || || || ||||| || ||||| ||||| ||||| ||||||||||||| ||||||||||
Sbjct: 848 gcaatttgaaactgctcctttgctagcttcactggatcctgctgtatgggcctttttcgc 789

                                                                       
Query: 478 accttcccagttgacggactcttgcctgagttgaacctggtaatgacttcaggcacttca 537
           | ||| |||||||| |||||||| |||||||||||||||||||| || ||||||||||||
Sbjct: 788 atctttccagttgatggactcttacctgagttgaacctggtaataacctcaggcacttca 729

                                                                       
Query: 538 gcacctttcagaagaagtgaaccatatgcaactgcagctccagcatgtcccttttctgaa 597
           |||||||| |  |||||||| |||||||||| |||||||||||  |||||||||||||| 
Sbjct: 728 gcaccttttaatagaagtgatccatatgcaattgcagctccagagtgtcccttttctgat 669

                                    
Query: 598 gctctatggaaacaccacatagctg 622
           ||||| |||||||||||||| ||||
Sbjct: 668 gctctgtggaaacaccacattgctg 644
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>dbj|AK068376.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013150O18, full
           insert sequence
          Length = 1209

 Score =  256 bits (129), Expect = 8e-65
 Identities = 231/265 (87%)
 Strand = Plus / Minus

                                                                       
Query: 358 ttttcgtaatctccaagcctcttcaaccaccgtaaaccgaggtcagatccagactcagct 417
           ||||| ||||| ||||||||||||| ||| || |||||||| ||| ||||||  ||||||
Sbjct: 936 ttttcataatccccaagcctcttcagccatcgcaaaccgagatcacatccagcttcagct 877

                                                                       
Query: 418 gctatctggaactgttcttttgcaagctttactgggtcctgctgtatggtcctttttcgc 477
           || || || ||||| || ||||| ||||| ||||| ||||||||||||| ||||||||||
Sbjct: 876 gcaatttgaaactgctcctttgctagcttcactggatcctgctgtatgggcctttttcgc 817

                                                                       
Query: 478 accttcccagttgacggactcttgcctgagttgaacctggtaatgacttcaggcacttca 537
           | ||| |||||||| |||||||| |||||||||||||||||||| || ||||||||||||
Sbjct: 816 atctttccagttgatggactcttacctgagttgaacctggtaataacctcaggcacttca 757

                                                                       
Query: 538 gcacctttcagaagaagtgaaccatatgcaactgcagctccagcatgtcccttttctgaa 597
           |||||||| |  |||||||| |||||||||| |||||||||||  |||||||||||||| 
Sbjct: 756 gcaccttttaatagaagtgatccatatgcaattgcagctccagagtgtcccttttctgat 697

                                    
Query: 598 gctctatggaaacaccacatagctg 622
           ||||| |||||||||||||| ||||
Sbjct: 696 gctctgtggaaacaccacattgctg 672
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>gb|AY110039.1| Zea mays CL15732_1 mRNA sequence
          Length = 1212

 Score =  202 bits (102), Expect = 1e-48
 Identities = 212/248 (85%), Gaps = 3/248 (1%)
 Strand = Plus / Minus

                                                                       
Query: 358 ttttcgtaatctccaagcctcttcaaccaccgtaaaccgaggtcagatccagactcagct 417
           ||||| ||| || ||||||||||||||||||| | |||||| ||| | || | |||||||
Sbjct: 877 ttttcataagcttcaagcctcttcaaccaccgcagaccgagatcacagcctgcctcagct 818

                                                                       
Query: 418 gctatctggaactgttcttttgcaagctttactgggtcctgctgtatggtcctttttcgc 477
           || || || ||||||||||| || ||||||||||| |||||||||  ||||||||| |||
Sbjct: 817 gcaatttgaaactgttctttcgctagctttactggatcctgctgttgggtccttttccgc 758

                                                                       
Query: 478 accttcccagttgacggactcttgcctgagttgaacctggtaatgacttcaggcacttca 537
           |  ||||||||||| ||||||||||||||||||||||| ||||| |||||||| | ||||
Sbjct: 757 attttcccagttgatggactcttgcctgagttgaaccttgtaataacttcaggtatttca 698

                                                                       
Query: 538 gcacctttcagaagaagtgaaccatatgcaactgcagctccagcatgtcccttttctgaa 597
           ||||||||   |||||| || |||||||| |  || || |||||||||||||||||||||
Sbjct: 697 gcaccttt---aagaagggatccatatgcgatagctgcaccagcatgtcccttttctgaa 641

                   
Query: 598 gctctatg 605
           ||||||||
Sbjct: 640 gctctatg 633
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
               sequence
          Length = 35954743

 Score =  178 bits (90), Expect = 1e-41
 Identities = 162/186 (87%)
 Strand = Plus / Plus

                                                                           
Query: 358     ttttcgtaatctccaagcctcttcaaccaccgtaaaccgaggtcagatccagactcagct 417
               ||||| ||||| ||||||||||||| ||| || |||||||| ||| ||||||  ||||||
Sbjct: 5745183 ttttcataatccccaagcctcttcagccatcgcaaaccgagatcacatccagcttcagct 5745242

                                                                           
Query: 418     gctatctggaactgttcttttgcaagctttactgggtcctgctgtatggtcctttttcgc 477
               || || || ||||| || ||||| ||||| ||||| ||||||||||||| ||||||||||
Sbjct: 5745243 gcaatttgaaactgctcctttgctagcttcactggatcctgctgtatgggcctttttcgc 5745302

                                                                           
Query: 478     accttcccagttgacggactcttgcctgagttgaacctggtaatgacttcaggcacttca 537
               | ||| |||||||| |||||||| |||||||||||||||||||| || ||||||||||||
Sbjct: 5745303 atctttccagttgatggactcttacctgagttgaacctggtaataacctcaggcacttca 5745362

                     
Query: 538     gcacct 543
               ||||||
Sbjct: 5745363 gcacct 5745368



 Score = 48.1 bits (24), Expect = 0.035
 Identities = 33/36 (91%)
 Strand = Plus / Plus

                                                   
Query: 587     ccttttctgaagctctatggaaacaccacatagctg 622
               |||||||||| ||||| |||||||||||||| ||||
Sbjct: 5745694 ccttttctgatgctctgtggaaacaccacattgctg 5745729



 Score = 48.1 bits (24), Expect = 0.035
 Identities = 36/40 (90%)
 Strand = Plus / Plus

                                                       
Query: 550     agaagtgaaccatatgcaactgcagctccagcatgtccct 589
               |||||||| |||||||||| |||||||||||  |||||||
Sbjct: 5745577 agaagtgatccatatgcaattgcagctccagagtgtccct 5745616
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>dbj|AP004045.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1135_F06
          Length = 102230

 Score =  178 bits (90), Expect = 1e-41
 Identities = 162/186 (87%)
 Strand = Plus / Plus

                                                                         
Query: 358   ttttcgtaatctccaagcctcttcaaccaccgtaaaccgaggtcagatccagactcagct 417
             ||||| ||||| ||||||||||||| ||| || |||||||| ||| ||||||  ||||||
Sbjct: 34697 ttttcataatccccaagcctcttcagccatcgcaaaccgagatcacatccagcttcagct 34756

                                                                         
Query: 418   gctatctggaactgttcttttgcaagctttactgggtcctgctgtatggtcctttttcgc 477
             || || || ||||| || ||||| ||||| ||||| ||||||||||||| ||||||||||
Sbjct: 34757 gcaatttgaaactgctcctttgctagcttcactggatcctgctgtatgggcctttttcgc 34816

                                                                         
Query: 478   accttcccagttgacggactcttgcctgagttgaacctggtaatgacttcaggcacttca 537
             | ||| |||||||| |||||||| |||||||||||||||||||| || ||||||||||||
Sbjct: 34817 atctttccagttgatggactcttacctgagttgaacctggtaataacctcaggcacttca 34876

                   
Query: 538   gcacct 543
             ||||||
Sbjct: 34877 gcacct 34882



 Score = 48.1 bits (24), Expect = 0.035
 Identities = 33/36 (91%)
 Strand = Plus / Plus

                                                 
Query: 587   ccttttctgaagctctatggaaacaccacatagctg 622
             |||||||||| ||||| |||||||||||||| ||||
Sbjct: 35208 ccttttctgatgctctgtggaaacaccacattgctg 35243



 Score = 48.1 bits (24), Expect = 0.035
 Identities = 36/40 (90%)
 Strand = Plus / Plus

                                                     
Query: 550   agaagtgaaccatatgcaactgcagctccagcatgtccct 589
             |||||||| |||||||||| |||||||||||  |||||||
Sbjct: 35091 agaagtgatccatatgcaattgcagctccagagtgtccct 35130
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>ref|NM_128115.2| Arabidopsis thaliana unknown protein AT2G25570 mRNA, complete cds
          Length = 1129

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 48/52 (92%)
 Strand = Plus / Minus

                                                               
Query: 571 gcagctccagcatgtcccttttctgaagctctatggaaacaccacatagctg 622
           ||||| |||||||||||||| |||||||| |||||||||||||| |||||||
Sbjct: 684 gcagcaccagcatgtcccttctctgaagccctatggaaacaccatatagctg 633
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>gb|BT015506.1| Arabidopsis thaliana At2g25570 mRNA sequence
          Length = 822

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 48/52 (92%)
 Strand = Plus / Minus

                                                               
Query: 571 gcagctccagcatgtcccttttctgaagctctatggaaacaccacatagctg 622
           ||||| |||||||||||||| |||||||| |||||||||||||| |||||||
Sbjct: 560 gcagcaccagcatgtcccttctctgaagccctatggaaacaccatatagctg 509
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>gb|BT025254.1| Arabidopsis thaliana At2g25570 mRNA, complete cds
          Length = 867

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 48/52 (92%)
 Strand = Plus / Minus

                                                               
Query: 571 gcagctccagcatgtcccttttctgaagctctatggaaacaccacatagctg 622
           ||||| |||||||||||||| |||||||| |||||||||||||| |||||||
Sbjct: 605 gcagcaccagcatgtcccttctctgaagccctatggaaacaccatatagctg 554
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>gb|DQ446566.1| Arabidopsis thaliana clone pENTR221-At2g25565 unknown (At2g25565)
           mRNA, complete cds
          Length = 867

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 48/52 (92%)
 Strand = Plus / Minus

                                                               
Query: 571 gcagctccagcatgtcccttttctgaagctctatggaaacaccacatagctg 622
           ||||| |||||||||||||| |||||||| |||||||||||||| |||||||
Sbjct: 605 gcagcaccagcatgtcccttctctgaagccctatggaaacaccatatagctg 554
to top
>emb|BX821444.1|CNS0A95N Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTSIL42ZB07 of Silique of strain col-0 of Arabidopsis
           thaliana (thale cress)
          Length = 980

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 48/52 (92%)
 Strand = Plus / Minus

                                                               
Query: 571 gcagctccagcatgtcccttttctgaagctctatggaaacaccacatagctg 622
           ||||| |||||||||||||| |||||||| |||||||||||||| |||||||
Sbjct: 626 gcagcaccagcatgtcccttctctgaagccctatggaaacaccatatagctg 575
to top
>gb|AY086172.1| Arabidopsis thaliana clone 21954 mRNA, complete sequence
          Length = 1103

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 48/52 (92%)
 Strand = Plus / Minus

                                                               
Query: 571 gcagctccagcatgtcccttttctgaagctctatggaaacaccacatagctg 622
           ||||| |||||||||||||| |||||||| |||||||||||||| |||||||
Sbjct: 684 gcagcaccagcatgtcccttctctgaagccctatggaaacaccatatagctg 633
to top
>dbj|AK176743.1| Arabidopsis thaliana mRNA, complete cds, clone: RAFL25-28-I06
          Length = 1076

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 48/52 (92%)
 Strand = Plus / Minus

                                                               
Query: 571 gcagctccagcatgtcccttttctgaagctctatggaaacaccacatagctg 622
           ||||| |||||||||||||| |||||||| |||||||||||||| |||||||
Sbjct: 652 gcagcaccagcatgtcccttctctgaagccctatggaaacaccatatagctg 601
to top
>emb|BX821302.1|CNS0A929 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTSIL32ZG02 of Silique of strain col-0 of Arabidopsis
           thaliana (thale cress)
          Length = 991

 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 41/44 (93%)
 Strand = Plus / Minus

                                                       
Query: 571 gcagctccagcatgtcccttttctgaagctctatggaaacacca 614
           ||||| |||||||||||||| |||||||| ||||||||||||||
Sbjct: 618 gcagcaccagcatgtcccttctctgaagccctatggaaacacca 575
to top
>gb|AC006300.4| Arabidopsis thaliana chromosome 2 clone F13B15 map mi238, complete
             sequence
          Length = 88770

 Score = 48.1 bits (24), Expect = 0.035
 Identities = 33/36 (91%)
 Strand = Plus / Plus

                                                 
Query: 587   ccttttctgaagctctatggaaacaccacatagctg 622
             |||| |||||||| |||||||||||||| |||||||
Sbjct: 85828 ccttctctgaagccctatggaaacaccatatagctg 85863
to top
>gb|AC006053.3| Arabidopsis thaliana chromosome 2 clone F3N11 map B68, complete
            sequence
          Length = 100745

 Score = 48.1 bits (24), Expect = 0.035
 Identities = 33/36 (91%)
 Strand = Plus / Plus

                                                
Query: 587  ccttttctgaagctctatggaaacaccacatagctg 622
            |||| |||||||| |||||||||||||| |||||||
Sbjct: 3576 ccttctctgaagccctatggaaacaccatatagctg 3611
to top
>gb|BT013087.1| Lycopersicon esculentum clone 114353F, mRNA sequence
          Length = 1392

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 38/43 (88%)
 Strand = Plus / Minus

                                                      
Query: 574 gctccagcatgtcccttttctgaagctctatggaaacaccaca 616
           ||||||||||| ||||| |  || |||||||||||||||||||
Sbjct: 696 gctccagcatgacccttctgagatgctctatggaaacaccaca 654
to top
>emb|BX901957.4| Zebrafish DNA sequence from clone CH211-150G5 in linkage group 15,
             complete sequence
          Length = 175019

 Score = 44.1 bits (22), Expect = 0.54
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 416   ctgctatctggaactgttcttt 437
             ||||||||||||||||||||||
Sbjct: 24770 ctgctatctggaactgttcttt 24791
to top
>emb|Z83848.1|HS57A13 Human DNA sequence from clone RP1-57A13 on chromosome Xq24 Contains the
              5' end of the GRIA3 gene for glutamate receptor,
              ionotrophic, AMPA 3, the gene for a novel protein and a CpG
              island, complete sequence
          Length = 169693

 Score = 44.1 bits (22), Expect = 0.54
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                        
Query: 336    ttgctttagctcttggggctcttttt 361
              |||||||||||||| |||||||||||
Sbjct: 131673 ttgctttagctcttcgggctcttttt 131698
to top
>emb|AL136449.10| Human DNA sequence from clone RP1-292M15 on chromosome Xq25-26.3,
             complete sequence
          Length = 24756

 Score = 44.1 bits (22), Expect = 0.54
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 337   tgctttagctcttggggctctttttc 362
             |||||||||| |||||||||||||||
Sbjct: 23238 tgctttagctgttggggctctttttc 23213
to top
>ref|XM_681907.1| PREDICTED: Danio rerio similar to tryptase 4 (LOC558663), mRNA
          Length = 942

 Score = 44.1 bits (22), Expect = 0.54
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 416 ctgctatctggaactgttcttt 437
           ||||||||||||||||||||||
Sbjct: 40  ctgctatctggaactgttcttt 19
to top
>dbj|AP004951.1| Lotus japonicus genomic DNA, chromosome 2, clone:LjT26I01, TM0124,
             complete sequence
          Length = 79571

 Score = 44.1 bits (22), Expect = 0.54
 Identities = 43/50 (86%)
 Strand = Plus / Minus

                                                               
Query: 540   acctttcagaagaagtgaaccatatgcaactgcagctccagcatgtccct 589
             |||||| |||||||| || ||||||||||  || ||||||||||| ||||
Sbjct: 65060 acctttaagaagaagagatccatatgcaatagctgctccagcatgcccct 65011
to top
>gb|AC159381.10| Mus musculus 6 BAC RP24-460E4 (Roswell Park Cancer Institute (C57BL/6J
              Male) Mouse BAC Library) complete sequence
          Length = 211463

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 556    gaaccatatgcaactgcagctccag 580
              |||||| ||||||||||||||||||
Sbjct: 129762 gaaccacatgcaactgcagctccag 129786
to top
>gb|AC183376.4| Pan troglodytes BAC clone CH251-735O6 from chromosome 13, complete
              sequence
          Length = 188255

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 323    gtcattgctgaatttgcttta 343
              |||||||||||||||||||||
Sbjct: 173648 gtcattgctgaatttgcttta 173668
to top
>gb|AF130866.6| Homo sapiens chromosome 8 clone GS1-172N13 map q24.22, complete
             sequence
          Length = 128891

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 59    tagtggcaaaaaagggatcaa 79
             |||||||||||||||||||||
Sbjct: 12948 tagtggcaaaaaagggatcaa 12968
to top
>gb|AC183528.2| Pan troglodytes BAC clone CH251-737P22 from chromosome 13, complete
              sequence
          Length = 202694

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 323    gtcattgctgaatttgcttta 343
              |||||||||||||||||||||
Sbjct: 164334 gtcattgctgaatttgcttta 164354
to top
>gb|AC007964.3| Homo sapiens BAC clone GS1-179L18 from 7, complete sequence
          Length = 154706

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 213    gtttctctccacattctgaaggcag 237
              ||||||||||||||| |||||||||
Sbjct: 154156 gtttctctccacattttgaaggcag 154180
to top
>emb|AL359457.12| Human DNA sequence from clone RP11-76K19 on chromosome 13 Contains a
            mitochondrial ribosomal protein S31 (MRPS31) pseudogene
            an estrogen-related receptor alpha pseudogene (ESRRAP),
            the 5' end of a novel gene, a novel protein (LOC113201)
            pseudogene, a novel gene and four CpG islands, complete
            sequence
          Length = 129779

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 323  gtcattgctgaatttgcttta 343
            |||||||||||||||||||||
Sbjct: 6364 gtcattgctgaatttgcttta 6384
to top
>emb|AL355132.19| Human DNA sequence from clone RP11-181D10 on chromosome 13 Contains a
              ring finger protein 12 (RNF12) pseudogene, the 5' end of
              the FOXO1A gene for forkhead box O1A (rhabdomyosarcoma),
              the 3' end of the MRPS31 gene for mitochondrial ribosomal
              protein S31 and a CpG island, complete sequence
          Length = 151261

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 323    gtcattgctgaatttgcttta 343
              |||||||||||||||||||||
Sbjct: 118369 gtcattgctgaatttgcttta 118389
to top
>emb|BX640588.5| Zebrafish DNA sequence from clone DKEY-110L7 in linkage group 6,
            complete sequence
          Length = 117506

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 416  ctgctatctggaactgttctt 436
            |||||||||||||||||||||
Sbjct: 9745 ctgctatctggaactgttctt 9765
to top
>gb|AC174233.4| Pan troglodytes BAC clone CH251-560K10 from chromosome unknown, complete
              sequence
          Length = 179813

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 551    gaagtgaaccatatgcaactg 571
              |||||||||||||||||||||
Sbjct: 113389 gaagtgaaccatatgcaactg 113369
to top
>gb|AC138185.2| Homo sapiens chromosome 8, clone RP11-640O8, complete sequence
          Length = 152309

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 59    tagtggcaaaaaagggatcaa 79
             |||||||||||||||||||||
Sbjct: 31488 tagtggcaaaaaagggatcaa 31508
to top
>gb|AC013734.4|AC013734 Homo sapiens BAC clone RP11-557B9 from Y, complete sequence
          Length = 180019

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 323    gtcattgctgaatttgcttta 343
              |||||||||||||||||||||
Sbjct: 119055 gtcattgctgaatttgcttta 119035
to top
>gb|AC006327.3| Homo sapiens BAC clone RP11-59I21 from 2, complete sequence
          Length = 92705

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 551   gaagtgaaccatatgcaactg 571
             |||||||||||||||||||||
Sbjct: 65244 gaagtgaaccatatgcaactg 65264
to top
>emb|BX255963.11| Zebrafish DNA sequence from clone CH211-195D17 in linkage group 20,
             complete sequence
          Length = 103956

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 417   tgctatctggaactgttcttt 437
             |||||||||||||||||||||
Sbjct: 96687 tgctatctggaactgttcttt 96707
to top
>dbj|AP005856.2| Homo sapiens genomic DNA, chromosome 8q24, clone: KB1568E2, complete
             sequence
          Length = 160612

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 59    tagtggcaaaaaagggatcaa 79
             |||||||||||||||||||||
Sbjct: 30274 tagtggcaaaaaagggatcaa 30294
to top
>gb|AC170088.9| Mus musculus  BAC RP23-94A1 (Roswell Park Cancer Institute (C57BL/6J
             Female) Mouse BAC Library) complete sequence
          Length = 253441

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 556   gaaccatatgcaactgcagctccag 580
             |||||| ||||||||||||||||||
Sbjct: 11893 gaaccacatgcaactgcagctccag 11917
to top
>ref|XM_631998.1| Dictyostelium discoideum ABC transporter C family protein
            (DDB0216251), partial mRNA
          Length = 4239

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                        
Query: 261  gtgcagcaagagcattgcaacatcaatt 288
            ||||| ||||||||||||| ||||||||
Sbjct: 2435 gtgcatcaagagcattgcatcatcaatt 2462
to top
>ref|NM_001031383.1| Gallus gallus phosphoglucomutase 2 (PGM2), mRNA
          Length = 2141

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 233  ggcagatgaaacatgaagctctggtaat 260
            ||||||||||| |||||||| |||||||
Sbjct: 1450 ggcagatgaaatatgaagctttggtaat 1423
to top
>gb|AF053356.1| Homo sapiens chromosome 7q22 sequence, complete sequence
          Length = 227968

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 576   tccagcatgtcccttttctg 595
             ||||||||||||||||||||
Sbjct: 62018 tccagcatgtcccttttctg 62037
to top
>gb|AC122893.6| Mus musculus BAC clone RP23-67C3 from chromosome 17, complete sequence
          Length = 206456

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 218    tctccacattctgaaggcag 237
              ||||||||||||||||||||
Sbjct: 149048 tctccacattctgaaggcag 149029
to top
>ref|XM_868499.1| PREDICTED: Bos taurus similar to tolloid-like 1 (LOC616468),
           partial mRNA
          Length = 1284

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 523 acttcaggcacttcagcacc 542
           ||||||||||||||||||||
Sbjct: 941 acttcaggcacttcagcacc 922
to top
>gb|AC138376.11| Mus musculus chromosome 7, clone RP23-53O7, complete sequence
          Length = 247484

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 527    caggcacttcagcacctttc 546
              ||||||||||||||||||||
Sbjct: 168070 caggcacttcagcacctttc 168051
to top
>ref|XM_420895.1| PREDICTED: Gallus gallus similar to phosphoglucomutase 2
           (LOC422961), partial mRNA
          Length = 1664

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 233 ggcagatgaaacatgaagctctggtaat 260
           ||||||||||| |||||||| |||||||
Sbjct: 762 ggcagatgaaatatgaagctttggtaat 735
to top
>gb|AC074277.6| Homo sapiens 3 BAC RP11-82N13 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 175064

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 336    ttgctttagctcttggggctctttttcg 363
              ||||||| ||| ||||||||||||||||
Sbjct: 141299 ttgctttggctattggggctctttttcg 141326
to top
>gb|AC104323.27| Mus musculus strain C57BL/6J chromosome 17 clone rp23-114o8 map 17,
             complete sequence
          Length = 202430

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 218   tctccacattctgaaggcag 237
             ||||||||||||||||||||
Sbjct: 81224 tctccacattctgaaggcag 81205
to top
>emb|AL096710.8|HSDJ61B2 Human DNA sequence from clone RP1-61B2 on chromosome 6p11.2-12.3
             Contains part of the BPAG1 gene for bullous pemphigoid
             antigen 1 (230/240kD), complete sequence
          Length = 119666

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 206   aacaaaggtttctctccacattct 229
             ||||| ||||||||||||||||||
Sbjct: 91024 aacaagggtttctctccacattct 91047
to top
>emb|AJ721042.1| Gallus gallus mRNA for hypothetical protein, clone 33e1
          Length = 2141

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 233  ggcagatgaaacatgaagctctggtaat 260
            ||||||||||| |||||||| |||||||
Sbjct: 1450 ggcagatgaaatatgaagctttggtaat 1423
to top
>gb|AC098972.2| Homo sapiens chromosome 3 clone RP11-197J13, complete sequence
          Length = 145993

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 310   tctttggctggaggtcattg 329
             ||||||||||||||||||||
Sbjct: 69840 tctttggctggaggtcattg 69859
to top
>gb|AF474335.1| Dictyostelium discoideum ABC transporter ABCC.3 (abcC3) gene,
            complete cds
          Length = 6007

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                        
Query: 261  gtgcagcaagagcattgcaacatcaatt 288
            ||||| ||||||||||||| ||||||||
Sbjct: 3306 gtgcatcaagagcattgcatcatcaatt 3333
to top
>ref|XM_682795.1| PREDICTED: Danio rerio hypothetical protein LOC559455 (LOC559455),
           mRNA
          Length = 1656

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 413 cagctgctatctggaactgttctt 436
           |||||||| |||||||||||||||
Sbjct: 46  cagctgctttctggaactgttctt 23
to top
>gb|AC009488.5| Homo sapiens BAC clone RP11-336D7 from 7, complete sequence
          Length = 98876

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 576   tccagcatgtcccttttctg 595
             ||||||||||||||||||||
Sbjct: 56138 tccagcatgtcccttttctg 56119
to top
>gb|AC154203.2| Mus musculus BAC clone RP24-387L1 from chromosome 13, complete sequence
          Length = 174845

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 535    tcagcacctttcagaagaag 554
              ||||||||||||||||||||
Sbjct: 116393 tcagcacctttcagaagaag 116412
to top
>gb|AC090514.1|AC090514 Homo sapiens chromosome 15 clone RP11-2O16 map 15q15, complete sequence
          Length = 166518

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 51     aaaatccttagtggcaaaaa 70
              ||||||||||||||||||||
Sbjct: 133048 aaaatccttagtggcaaaaa 133067
to top
>gb|AC023829.6| Homo sapiens chromosome 16 clone RP11-578P21, complete sequence
          Length = 161477

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 534   ttcagcacctttcagaagaa 553
             ||||||||||||||||||||
Sbjct: 52376 ttcagcacctttcagaagaa 52357
to top
>gb|AC136214.4| Mus musculus BAC clone RP23-53G11 from chromosome 10, complete sequence
          Length = 203909

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 311   ctttggctggaggtcattgc 330
             ||||||||||||||||||||
Sbjct: 89492 ctttggctggaggtcattgc 89473
to top
>gb|AF466199.1| Sorghum bicolor putative receptor protein kinase,
              aminoalcoholphosphotransferase, putative growth-regulating
              factor 1, putative GAG-POL precursor, putative GAG-POL
              precursor, putative RIRE2 orf3, putative anthocyanin
              regulatory C1, putative protein T30F21.6, putative copia
              polyprotein, putative copia polyprotein, putative protein
              NP_196765.1, and gb protein genes, complete cds; and
              putative zinc finger protein gene, partial cds
          Length = 144159

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 227    tctgaaggcagatgaaacat 246
              ||||||||||||||||||||
Sbjct: 142178 tctgaaggcagatgaaacat 142159
to top
>gb|M97764.1|HUMERPALU Homo sapiens erythropoietin gene 5' flank including Alu repeats
          Length = 5169

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 576 tccagcatgtcccttttctg 595
           ||||||||||||||||||||
Sbjct: 137 tccagcatgtcccttttctg 118


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,508,044
Number of Sequences: 3902068
Number of extensions: 5508044
Number of successful extensions: 102844
Number of sequences better than 10.0: 61
Number of HSP's better than 10.0 without gapping: 61
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 102701
Number of HSP's gapped (non-prelim): 142
length of query: 623
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 600
effective length of database: 17,143,297,704
effective search space: 10285978622400
effective search space used: 10285978622400
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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