>UBP35_HUMAN (Q9P2H5) Ubiquitin carboxyl-terminal hydrolase 35 (EC 3.1.2.15)|
           (Ubiquitin thioesterase 35)
           (Ubiquitin-specific-processing protease 35)
           (Deubiquitinating enzyme 35)
          Length = 1017

 Score = 30.4 bits (67), Expect = 2.2
 Identities = 12/35 (34%), Positives = 23/35 (65%)
 Frame = +3

Query: 132 IRLSLRILP*GSSINNVFSTLTVQIAKTICLPPFP 236
           ++L L++LP G + + VF+ L  ++ +T+C  P P
Sbjct: 104 VQLGLQLLPEGPAADEVFALLRREVLRTVCERPGP 138

>FTSH_HELFE (O32617) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 638

 Score = 30.0 bits (66), Expect = 2.9
 Identities = 14/32 (43%), Positives = 19/32 (59%)
 Frame = -1

Query: 382 IVQEVQKSMGNKDSGEGSDKKLSRAKKPLIMF 287
           +   +QK+MG    G GS KKL  A+KP + F
Sbjct: 144 MASRMQKNMGGGIFGMGSSKKLINAEKPKVRF 175

>FTSH_HELPY (P71408) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 632

 Score = 28.9 bits (63), Expect = 6.4
 Identities = 14/32 (43%), Positives = 19/32 (59%)
 Frame = -1

Query: 382 IVQEVQKSMGNKDSGEGSDKKLSRAKKPLIMF 287
           +   +QK+MG    G GS KKL  A+KP + F
Sbjct: 138 MANRMQKNMGGGIFGMGSAKKLINAEKPNVRF 169

>FTSH_HELPJ (Q9ZM66) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 632

 Score = 28.9 bits (63), Expect = 6.4
 Identities = 14/32 (43%), Positives = 19/32 (59%)
 Frame = -1

Query: 382 IVQEVQKSMGNKDSGEGSDKKLSRAKKPLIMF 287
           +   +QK+MG    G GS KKL  A+KP + F
Sbjct: 138 MANRMQKNMGGGIFGMGSAKKLINAEKPNVRF 169

>Y678_DROME (Q8T053) Hypothetical zinc finger protein CG2678 in chromosome 3|
          Length = 434

 Score = 28.5 bits (62), Expect = 8.4
 Identities = 24/75 (32%), Positives = 31/75 (41%), Gaps = 7/75 (9%)
 Frame = +2

Query: 188 HFDSTNC*NYLPPSFSAPPHPALFKCLLCKGA---KEHDKWFLRP----GKLFIRSFSAI 346
           +   +N   +L    S P H    KC  C  A   K+H K  LR     G L     SA+
Sbjct: 230 YMQKSNLKRHLRNHLSKPAH----KCFHCSKAFMRKDHLKRHLRTHDSDGPLSCSQCSAV 285

Query: 347 FISHAFLDLLDYPHK 391
           FI H  L++    HK
Sbjct: 286 FIEHVQLEIHRREHK 300


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 60,955,838
Number of Sequences: 219361
Number of extensions: 1115727
Number of successful extensions: 2652
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 2608
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2652
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 2851757076
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)